Pregenerated sensors for EGFL8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015467Ensembl transcript IDs: ENSMUST00000015611.14, ENSMUST00000097345.10, ENSMUST00000168353.4
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | GCCTGTTGTACTTCAGTGGTTGATATCCATATCTTCTaGTCCCAGGTTAGCAGGTGTAGCTTCTGTGTAAGT | + |
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Preference number: 3 (lower is better) Translates to: ACCTSVVDIHIF*SQVSRCSFCVS Trigger: ACTTACACAGAAGCTACACCTGCTAACCTGGGATCAGAAGATATGGATATCAACCACTGAAGTACAACAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 |
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| CDS-3UTR GCA 90 bp | AGCAGGTGTAGCTTCTGTGTAAGTTGGGGACCCCAGCTGCTGCGGGCATTCCTCGCCTGTGTGGCCCACTaGTCCAGCTTCTCCAGACGC | + |
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Preference number: 4 (lower is better) Translates to: SRCSFCVSWGPQLLRAFLACVAH*SSFSRR Trigger: GCGTCTGGAGAAGCTGGAGCAGTGGGCCACACAGGC...GAGGAATGCCCGCAGCAGCTGGGGTCCCCAACTTACACAGAAGCTACACCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 |
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| CDS-3UTR TCA 90 bp | AGCAGGTGTAGCTTCTGTGTAAGTTGGGGACCCCAGCTGCTGCGGGCATTCCTCGGCTTCTTCCAGCCCTaGCAGCACACCACGTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: SRCSFCVSWGPQLLRAFLGFFQP*QHTTCV Trigger: GACACACGTGGTGTGCTGTCAGGGCTGGAAGAAGCC...GAGGAATGCCCGCAGCAGCTGGGGTCCCCAACTTACACAGAAGCTACACCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 |
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| CDS-3UTR TCA 90 bp | AGCAGGTGTAGCTTCTGTGTAAGTTGGGGACCCCAGCTGCTGCGGGCATTCCTCGTGTTGAGGCAGCCATaGGAGCAGAGGGTAAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SRCSFCVSWGPQLLRAFLVLRQP*EQRVRL Trigger: CAGCCTTACCCTCTGCTCTCATGGCTGCCTCAACAC...GAGGAATGCCCGCAGCAGCTGGGGTCCCCAACTTACACAGAAGCTACACCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 |
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| CDS-3UTR CCA 90 bp | AGCAGGTGTAGCTTCTGTGTAAGTTGGGGACCCCAGCTGCTGCGGGCATTCCTCACAGGTGAGAGCTCCTaGGTGTGGCTTCTTCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SRCSFCVSWGPQLLRAFLTGESS*VWLLPA Trigger: GGCTGGAAGAAGCCACACCCAGGAGCTCTCACCTGT...GAGGAATGCCCGCAGCAGCTGGGGTCCCCAACTTACACAGAAGCTACACCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 |
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| CDS-3UTR CCA 90 bp | AGCAGGTGTAGCTTCTGTGTAAGTTGGGGACCCCAGCTGCTGCGGGCATTCCTCTCATCCACGCAGGCTTaGGCCCAGGCTGTTATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRCSFCVSWGPQLLRAFLSSTQA*AQAVIL Trigger: GAGGATAACAGCCTGGGCCCAAGCCTGCGTGGATGA...GAGGAATGCCCGCAGCAGCTGGGGTCCCCAACTTACACAGAAGCTACACCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 |
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| CDS-3UTR GCA 90 bp | AATAAAGAGAAAGAGAGACGTGGGGTTCTCTGCGGCCTGTTGTACTTCAGTGGTGCCTGTGTGGCCCACTaGTCCAGCTTCTCCAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: NKEKERRGVLCGLLYFSGACVAH*SSFSRR Trigger: GCGTCTGGAGAAGCTGGAGCAGTGGGCCACACAGGC...ACCACTGAAGTACAACAGGCCGCAGAGAACCCCACGTCTCTCTTTCTCTTTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 |
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| CDS-3UTR GCA 90 bp | CCTGTTGTACTTCAGTGGTTGATATCCATATCTTCTGATCCCAGGTTAGCAGGTGGGCATGGGCAGCACTaGTCGAACCCAGGCCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PVVLQWLISISSDPRLAGGHGQH*SNPGPS Trigger: GCTGGGGCCTGGGTTCGAGCAGTGCTGCCCATGCCC...ACCTGCTAACCTGGGATCAGAAGATATGGATATCAACCACTGAAGTACAACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015611.14 |
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| CDS-3UTR CCA 90 bp | TGGGGTTCTCTGCGGCCTGTTGTACTTCAGTGGTTGATATCCATATCTTCTGATCTTTCCTCCCCAGCCTaGGGCACACTCGCACCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: WGSLRPVVLQWLISISSDLSSPA*GTLAPV Trigger: GACCGGTGCGAGTGTGCCCCAGGCTGGGGAGGAAAG...ATCAGAAGATATGGATATCAACCACTGAAGTACAACAGGCCGCAGAGAACCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 |
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| CDS-3UTR CCA 90 bp | TCTCTGCGGCCTGTTGTACTTCAGTGGTTGATATCCATATCTTCTGATCCCAGGCACCACGTGTGTCTGTaGTACCTCCCGCCTCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLRPVVLQWLISISSDPRHHVCL*YLPPHL Trigger: GAGGTGAGGCGGGAGGTACCACAGACACACGTGGTG...CCTGGGATCAGAAGATATGGATATCAACCACTGAAGTACAACAGGCCGCAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 |
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| CDS-3UTR CCA 90 bp | CTTCAGTGGTTGATATCCATATCTTCTGATCCCAGGTTAGCAGGTGTAGCTTCTCTTTCCTCCCCAGCCTaGGGCACACTCGCACCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LQWLISISSDPRLAGVASLSSPA*GTLAPV Trigger: GACCGGTGCGAGTGTGCCCCAGGCTGGGGAGGAAAG...AGAAGCTACACCTGCTAACCTGGGATCAGAAGATATGGATATCAACCACTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 |
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| CDS-3UTR TCA 90 bp | TGGGGTTCTCTGCGGCCTGTTGTACTTCAGTGGTTGATATCCATATCTTCTGATGGCTTCTTCCAGCCCTaGCAGCACACCACGTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: WGSLRPVVLQWLISISSDGFFQP*QHTTCV Trigger: GACACACGTGGTGTGCTGTCAGGGCTGGAAGAAGCC...ATCAGAAGATATGGATATCAACCACTGAAGTACAACAGGCCGCAGAGAACCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 |
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| CDS-3UTR TCA 90 bp | TCTCTGCGGCCTGTTGTACTTCAGTGGTTGATATCCATATCTTCTGATCCCAGGGTGTTGAGGCAGCCATaGGAGCAGAGGGTAAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLRPVVLQWLISISSDPRVLRQP*EQRVRL Trigger: CAGCCTTACCCTCTGCTCTCATGGCTGCCTCAACAC...CCTGGGATCAGAAGATATGGATATCAACCACTGAAGTACAACAGGCCGCAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 |
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| CDS-3UTR TCA 90 bp | TCTCTGCGGCCTGTTGTACTTCAGTGGTTGATATCCATATCTTCTGATCCCAGGAGCTGCCCAGTGTGTTaGGGCAGCCATGAGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLRPVVLQWLISISSDPRSCPVC*GSHESR Trigger: TCTGCTCTCATGGCTGCCTCAACACACTGGGCAGCT...CCTGGGATCAGAAGATATGGATATCAACCACTGAAGTACAACAGGCCGCAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 |
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| CDS-3UTR CCA 90 bp | AATAAAGAGAAAGAGAGACGTGGGGTTCTCTGCGGCCTGTTGTACTTCAGTGGTCAGCACCAGGGGGTGTaGACAGCTGCACAAGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: NKEKERRGVLCGLLYFSGQHQGV*TAAQEA Trigger: AGCTTCTTGTGCAGCTGTCCACACCCCCTGGTGCTG...ACCACTGAAGTACAACAGGCCGCAGAGAACCCCACGTCTCTCTTTCTCTTTATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 |
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| CDS-3UTR TCA 90 bp | CTGCGGCCTGTTGTACTTCAGTGGTTGATATCCATATCTTCTGATCCCAGGTTAAGCTGCCCAGTGTGTTaGGGCAGCCATGAGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LRPVVLQWLISISSDPRLSCPVC*GSHESR Trigger: TCTGCTCTCATGGCTGCCTCAACACACTGGGCAGCT...TAACCTGGGATCAGAAGATATGGATATCAACCACTGAAGTACAACAGGCCGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 |
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| CDS-3UTR GCA 90 bp | CTGCGGCCTGTTGTACTTCAGTGGTTGATATCCATATCTTCTGATCCCAGGTTAACATCCACGTGGCAATaGTTTCCTCCCCAGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRPVVLQWLISISSDPRLTSTWQ*FPPQPG Trigger: CCCAGGCTGGGGAGGAAAGCATTGCCACGTGGATGT...TAACCTGGGATCAGAAGATATGGATATCAACCACTGAAGTACAACAGGCCGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 |
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| CDS-3UTR GCA 90 bp | TGGGGTTCTCTGCGGCCTGTTGTACTTCAGTGGTTGATATCCATATCTTCTGATACATCCACGTGGCAATaGTTTCCTCCCCAGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: WGSLRPVVLQWLISISSDTSTWQ*FPPQPG Trigger: CCCAGGCTGGGGAGGAAAGCATTGCCACGTGGATGT...ATCAGAAGATATGGATATCAACCACTGAAGTACAACAGGCCGCAGAGAACCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 |
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| CDS-3UTR CCA 90 bp | CTGCGGCCTGTTGTACTTCAGTGGTTGATATCCATATCTTCTGATCCCAGGTTAACAGGTGAGAGCTCCTaGGTGTGGCTTCTTCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LRPVVLQWLISISSDPRLTGESS*VWLLPA Trigger: GGCTGGAAGAAGCCACACCCAGGAGCTCTCACCTGT...TAACCTGGGATCAGAAGATATGGATATCAACCACTGAAGTACAACAGGCCGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 |
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| CDS-3UTR CCA 90 bp | TGGGGTTCTCTGCGGCCTGTTGTACTTCAGTGGTTGATATCCATATCTTCTGATCAGCACCAGGGGGTGTaGACAGCTGCACAAGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WGSLRPVVLQWLISISSDQHQGV*TAAQEA Trigger: AGCTTCTTGTGCAGCTGTCCACACCCCCTGGTGCTG...ATCAGAAGATATGGATATCAACCACTGAAGTACAACAGGCCGCAGAGAACCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 |
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| CDS-3UTR CCA 90 bp | TGGGGTTCTCTGCGGCCTGTTGTACTTCAGTGGTTGATATCCATATCTTCTGATTCATCCACGCAGGCTTaGGCCCAGGCTGTTATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: WGSLRPVVLQWLISISSDSSTQA*AQAVIL Trigger: GAGGATAACAGCCTGGGCCCAAGCCTGCGTGGATGA...ATCAGAAGATATGGATATCAACCACTGAAGTACAACAGGCCGCAGAGAACCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 |
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| CDS-3UTR TCA 90 bp | CTTCAGTGGTTGATATCCATATCTTCTGATCCCAGGTTAGCAGGTGTAGCTTCTAGATGGCATCACAGGTaGGAGCTCCTGGGTGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LQWLISISSDPRLAGVASRWHHR*ELLGVA Trigger: AGCCACACCCAGGAGCTCTCACCTGTGATGCCATCT...AGAAGCTACACCTGCTAACCTGGGATCAGAAGATATGGATATCAACCACTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 |
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| CDS-3UTR CCA 90 bp | AATAAAGAGAAAGAGAGACGTGGGGTTCTCTGCGGCCTGTTGTACTTCAGTGGTTCATCGACATCCACGTaGCAATGCTTTCCTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NKEKERRGVLCGLLYFSGSSTST*QCFPPQ Trigger: CTGGGGAGGAAAGCATTGCCACGTGGATGTCGATGA...ACCACTGAAGTACAACAGGCCGCAGAGAACCCCACGTCTCTCTTTCTCTTTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 |
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| CDS-3UTR TCA 90 bp | AATAAAGAGAAAGAGAGACGTGGGGTTCTCTGCGGCCTGTTGTACTTCAGTGGTCTCCCAAACTCTCTTTaGAAGATCCTCCTCTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: NKEKERRGVLCGLLYFSGLPNSL*KILLWS Trigger: GGACCAGAGGAGGATCTTTCAAAGAGAGTTTGGGAG...ACCACTGAAGTACAACAGGCCGCAGAGAACCCCACGTCTCTCTTTCTCTTTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 |
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| CDS-3UTR TCA 90 bp | TCTCTGCGGCCTGTTGTACTTCAGTGGTTGATATCCATATCTTCTGATCCCAGGCTCCCAAACTCTCTTTaGAAGATCCTCCTCTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: SLRPVVLQWLISISSDPRLPNSL*KILLWS Trigger: GGACCAGAGGAGGATCTTTCAAAGAGAGTTTGGGAG...CCTGGGATCAGAAGATATGGATATCAACCACTGAAGTACAACAGGCCGCAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 |
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| CDS-3UTR CCA 90 bp | TGGGGTTCTCTGCGGCCTGTTGTACTTCAGTGGTTGATATCCATATCTTCTGATTCATCGACATCCACGTaGCAATGCTTTCCTCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: WGSLRPVVLQWLISISSDSSTST*QCFPPQ Trigger: CTGGGGAGGAAAGCATTGCCACGTGGATGTCGATGA...ATCAGAAGATATGGATATCAACCACTGAAGTACAACAGGCCGCAGAGAACCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 |
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| CDS CCA 90 bp | CCCAAAGCTCAGCCACCTGTTCAGGCCGCAGCTCTTCAGGGGGCATaGGCAGCACTGCTCGAACCCAGGCCCCAGCCTGTGTGGCCCACT | + |
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Preference number: 5 (lower is better) Translates to: PKAQPPVQAAALQGA*AALLEPRPQPVWPT Trigger: AGTGGGCCACACAGGCTGGGGCCTGGGTTCGAGCAGTGCTGCCCATGCCCCCTGAAGAGCTGCGGCCTGAACAGGTGGCTGAGCTTTGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015611.14 ENSMUST00000168353.4 |
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| CDS GCA 90 bp | CTGTGTGGCCCACTGCTCCAGCTTCTCCAGACGCCCACGAAGCTCTaGAACCTCCCACCTCAGGGCTCGCTCCTCTTCGCTGTCTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: LCGPLLQLLQTPTKL*NLPPQGSLLFAVCF Trigger: GAAGCAGACAGCGAAGAGGAGCGAGCCCTGAGGTGGGAGGTTGCAGAGCTTCGTGGGCGTCTGGAGAAGCTGGAGCAGTGGGCCACACAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 ENSMUST00000168353.4 |
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| CDS GCA 90 bp | CAGAGGGTAAGGCTGGCCCTGCATTCATCGACATCCACGTGGCAATaGTTTCCTCCCCAGCCTGGGGCACACTCGCACCGGTCTGGTCCA | + |
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Preference number: 5 (lower is better) Translates to: QRVRLALHSSTSTWQ*FPPQPGAHSHRSGP Trigger: TGGACCAGACCGGTGCGAGTGTGCCCCAGGCTGGGGAGGAAAGCATTGCCACGTGGATGTCGATGAATGCAGGGCCAGCCTTACCCTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 ENSMUST00000168353.4 |
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| CDS GCA 90 bp | CCTCCCGCCAGGCCACACGGTATGTGGTCCTGTAGGTGCTACATATaGGCCTCCCCGCACACAAGGTCAGGTAGGGTTTGTACACCGGTT | + |
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Preference number: 5 (lower is better) Translates to: PPARPHGMWSCRCYI*ASPHTRSGRVCTPV Trigger: AACCGGTGTACAAACCCTACCTGACCTTGTGTGCGGGGAGGCGCATATGTAGCACCTACAGGACCACATACCGTGTGGCCTGGCGGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 ENSMUST00000168353.4 |
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| CDS CCA 90 bp | CCTGCATTCATCGACATCCACGTGGCAATGCTTTCCTCCCCAGCCTaGGGCACACTCGCACCGGTCTGGTCCAGTGCAGACACCTCCATT | + |
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Preference number: 5 (lower is better) Translates to: PAFIDIHVAMLSSPA*GTLAPVWSSADTSI Trigger: AATGGAGGTGTCTGCACTGGACCAGACCGGTGCGAGTGTGCCCCAGGCTGGGGAGGAAAGCATTGCCACGTGGATGTCGATGAATGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 ENSMUST00000168353.4 |
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| CDS CCA 90 bp | GTGGCAATGCTTTCCTCCCCAGCCTGGGGCACACTCGCACCGGTCTaGTCCAGTGCAGACACCTCCATTAAGACAAGGCTTGGAGCAGAT | + |
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Preference number: 5 (lower is better) Translates to: VAMLSSPAWGTLAPV*SSADTSIKTRLGAD Trigger: ATCTGCTCCAAGCCTTGTCTTAATGGAGGTGTCTGCACTGGACCAGACCGGTGCGAGTGTGCCCCAGGCTGGGGAGGAAAGCATTGCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 ENSMUST00000168353.4 |
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| CDS TCA 90 bp | GAGGAACCAGCAGCGTCTGCTTGGAGCACACTCCCAAACTCTCTTTaGAAGATCCTCCTCTGGTCCCTTCGCCCGTCATCAGCACCAGGA | + |
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Preference number: 5 (lower is better) Translates to: EEPAASAWSTLPNSL*KILLWSLRPSSAPG Trigger: TCCTGGTGCTGATGACGGGCGAAGGGACCAGAGGAGGATCTTTCAAAGAGAGTTTGGGAGTGTGCTCCAAGCAGACGCTGCTGGTTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 ENSMUST00000168353.4 |
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| CDS-3UTR CAA 90 bp | AGCAGGTGTAGCTTCTGTGTAAGTTGGGGACCCCAGCTGCTGCGGGCATTCCTCGGGTTTGTACACCGGTaGACTATAGGACTCGTTGTA | + |
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Preference number: 5 (lower is better) Translates to: SRCSFCVSWGPQLLRAFLGFVHR*TIGLVV Trigger: TACAACGAGTCCTATAGTCAACCGGTGTACAAACCC...GAGGAATGCCCGCAGCAGCTGGGGTCCCCAACTTACACAGAAGCTACACCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 |
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| CDS-3UTR CAA 90 bp | AATAAAGAGAAAGAGAGACGTGGGGTTCTCTGCGGCCTGTTGTACTTCAGTGGTACCAGCAGCGTCTGCTaGGAGCACACTCCCAAACTC | + |
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Preference number: 5 (lower is better) Translates to: NKEKERRGVLCGLLYFSGTSSVC*EHTPKL Trigger: GAGTTTGGGAGTGTGCTCCAAGCAGACGCTGCTGGT...ACCACTGAAGTACAACAGGCCGCAGAGAACCCCACGTCTCTCTTTCTCTTTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 |
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| CDS-3UTR CAA 90 bp | CCTGTTGTACTTCAGTGGTTGATATCCATATCTTCTGATCCCAGGTTAGCAGGTACCAGCAGCGTCTGCTaGGAGCACACTCCCAAACTC | + |
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Preference number: 5 (lower is better) Translates to: PVVLQWLISISSDPRLAGTSSVC*EHTPKL Trigger: GAGTTTGGGAGTGTGCTCCAAGCAGACGCTGCTGGT...ACCTGCTAACCTGGGATCAGAAGATATGGATATCAACCACTGAAGTACAACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 |
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| CDS-3UTR CAA 90 bp | CTTCAGTGGTTGATATCCATATCTTCTGATCCCAGGTTAGCAGGTGTAGCTTCTGGGTTTGTACACCGGTaGACTATAGGACTCGTTGTA | + |
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Preference number: 5 (lower is better) Translates to: LQWLISISSDPRLAGVASGFVHR*TIGLVV Trigger: TACAACGAGTCCTATAGTCAACCGGTGTACAAACCC...AGAAGCTACACCTGCTAACCTGGGATCAGAAGATATGGATATCAACCACTGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 |
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| CDS GCA 72 bp | TTCAGGCCGCAGCTCTTCAGGGGGCATGGGCAGCACTaGTCGAACCCAGGCCCCAGCCTGTGTGGCCCACTG | + |
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Preference number: 6 (lower is better) Translates to: FRPQLFRGHGQH*SNPGPSLCGPL Trigger: CAGTGGGCCACACAGGCTGGGGCCTGGGTTCGAGCAGTGCTGCCCATGCCCCCTGAAGAGCTGCGGCCTGAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015611.14 ENSMUST00000168353.4 |
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| CDS CCA 72 bp | CAGCCACCTGTTCAGGCCGCAGCTCTTCAGGGGGCATaGGCAGCACTGCTCGAACCCAGGCCCCAGCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: QPPVQAAALQGA*AALLEPRPQPV Trigger: CACAGGCTGGGGCCTGGGTTCGAGCAGTGCTGCCCATGCCCCCTGAAGAGCTGCGGCCTGAACAGGTGGCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015611.14 ENSMUST00000168353.4 |
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| CDS GCA 72 bp | CCACTGCTCCAGCTTCTCCAGACGCCCACGAAGCTCTaGAACCTCCCACCTCAGGGCTCGCTCCTCTTCGCT | + |
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Preference number: 6 (lower is better) Translates to: PLLQLLQTPTKL*NLPPQGSLLFA Trigger: AGCGAAGAGGAGCGAGCCCTGAGGTGGGAGGTTGCAGAGCTTCGTGGGCGTCTGGAGAAGCTGGAGCAGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 ENSMUST00000168353.4 |
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| CDS GCA 72 bp | CCTCCCGCCAGGCCACACGGTATGTGGTCCTGTAGGTaGTACATATGCGCCTCCCCGCACACAAGGTCAGGT | + |
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Preference number: 6 (lower is better) Translates to: PPARPHGMWSCR*YICASPHTRSG Trigger: ACCTGACCTTGTGTGCGGGGAGGCGCATATGTAGCACCTACAGGACCACATACCGTGTGGCCTGGCGGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 ENSMUST00000168353.4 |
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| CDS GCA 72 bp | CAGGGCTCGCTCCTCTTCGCTGTCTGCTTCCCGAACTaGCACACTGAGGATGCTGGCACTTGTCGGGGACTC | + |
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Preference number: 6 (lower is better) Translates to: QGSLLFAVCFPN*HTEDAGTCRGL Trigger: GAGTCCCCGACAAGTGCCAGCATCCTCAGTGTGGCAGTTCGGGAAGCAGACAGCGAAGAGGAGCGAGCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 ENSMUST00000168353.4 |
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| CDS CCA 72 bp | ATCGACATCCACGTGGCAATGCTTTCCTCCCCAGCCTaGGGCACACTCGCACCGGTCTGGTCCAGTGCAGAC | + |
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Preference number: 6 (lower is better) Translates to: IDIHVAMLSSPA*GTLAPVWSSAD Trigger: GTCTGCACTGGACCAGACCGGTGCGAGTGTGCCCCAGGCTGGGGAGGAAAGCATTGCCACGTGGATGTCGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 ENSMUST00000168353.4 |
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| CDS GCA 72 bp | AACCTCCCACCTCAGGGCTCGCTCCTCTTCGCTGTCTaGTTCCCGAACTGCCACACTGAGGATGCTGGCACT | + |
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Preference number: 6 (lower is better) Translates to: NLPPQGSLLFAV*FPNCHTEDAGT Trigger: AGTGCCAGCATCCTCAGTGTGGCAGTTCGGGAAGCAGACAGCGAAGAGGAGCGAGCCCTGAGGTGGGAGGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 ENSMUST00000168353.4 |
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| CDS CCA 72 bp | AGGGTAAGGCTGGCCCTGCATTCATCGACATCCACGTaGCAATGCTTTCCTCCCCAGCCTGGGGCACACTCG | + |
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Preference number: 6 (lower is better) Translates to: RVRLALHSSTST*QCFPPQPGAHS Trigger: CGAGTGTGCCCCAGGCTGGGGAGGAAAGCATTGCCACGTGGATGTCGATGAATGCAGGGCCAGCCTTACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 ENSMUST00000168353.4 |
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| CDS CAA 90 bp | AGAGGAACCAGCAGCGTCTGCTTGGAGCACACTCCCAAACTCTCTTaGAAAGATCCTCCTCTGGTCCCTTCGCCCGTCATCAGCACCAGG | + |
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Preference number: 6 (lower is better) Translates to: RGTSSVCLEHTPKLS*KDPPLVPSPVISTR Trigger: CCTGGTGCTGATGACGGGCGAAGGGACCAGAGGAGGATCTTTCAAAGAGAGTTTGGGAGTGTGCTCCAAGCAGACGCTGCTGGTTCCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 ENSMUST00000168353.4 |
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| CDS GCA 72 bp | AGGCCACACGGTATGTGGTCCTGTAGGTGCTACATATaGGCCTCCCCGCACACAAGGTCAGGTAGGGTTTGT | + |
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Preference number: 6 (lower is better) Translates to: RPHGMWSCRCYI*ASPHTRSGRVC Trigger: ACAAACCCTACCTGACCTTGTGTGCGGGGAGGCGCATATGTAGCACCTACAGGACCACATACCGTGTGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 ENSMUST00000168353.4 |
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| CDS CAA 90 bp | TATGCGCCTCCCCGCACACAAGGTCAGGTAGGGTTTGTACACCGGTaGACTATAGGACTCGTTGTAACGGAGAGGAACCAGCAGCGTCTG | + |
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Preference number: 6 (lower is better) Translates to: YAPPRTQGQVGFVHR*TIGLVVTERNQQRL Trigger: CAGACGCTGCTGGTTCCTCTCCGTTACAACGAGTCCTATAGTCAACCGGTGTACAAACCCTACCTGACCTTGTGTGCGGGGAGGCGCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 ENSMUST00000168353.4 |
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| CDS TCA 72 bp | GCAGCGTCTGCTTGGAGCACACTCCCAAACTCTCTTTaGAAGATCCTCCTCTGGTCCCTTCGCCCGTCATCA | + |
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Preference number: 6 (lower is better) Translates to: AASAWSTLPNSL*KILLWSLRPSS Trigger: TGATGACGGGCGAAGGGACCAGAGGAGGATCTTTCAAAGAGAGTTTGGGAGTGTGCTCCAAGCAGACGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 ENSMUST00000168353.4 |
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| CDS CAA 72 bp | AGCAGCGTCTGCTTGGAGCACACTCCCAAACTCTCTTaGAAAGATCCTCCTCTGGTCCCTTCGCCCGTCATC | + |
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Preference number: 6 (lower is better) Translates to: SSVCLEHTPKLS*KDPPLVPSPVI Trigger: GATGACGGGCGAAGGGACCAGAGGAGGATCTTTCAAAGAGAGTTTGGGAGTGTGCTCCAAGCAGACGCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 ENSMUST00000168353.4 |
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| CDS CAA 72 bp | TCTGGTCCAGTGCAGACACCTCCATTAAGACAAGGCTaGGAGCAGATGGCATCACAGGTGAGAGCTCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: SGPVQTPPLRQG*EQMASQVRAPG Trigger: CCCAGGAGCTCTCACCTGTGATGCCATCTGCTCCAAGCCTTGTCTTAATGGAGGTGTCTGCACTGGACCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 ENSMUST00000168353.4 |
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| CDS CAA 72 bp | CCCCGCACACAAGGTCAGGTAGGGTTTGTACACCGGTaGACTATAGGACTCGTTGTAACGGAGAGGAACCAG | + |
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Preference number: 6 (lower is better) Translates to: PRTQGQVGFVHR*TIGLVVTERNQ Trigger: CTGGTTCCTCTCCGTTACAACGAGTCCTATAGTCAACCGGTGTACAAACCCTACCTGACCTTGTGTGCGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015611.14 ENSMUST00000097345.10 ENSMUST00000168353.4 |
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