RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EGFL7 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000026921

Ensembl transcript IDs: ENSMUST00000100290.13, ENSMUST00000102907.13, ENSMUST00000131112.2, ENSMUST00000139801.9, ENSMUST00000145575.10, ENSMUST00000149789.2, ENSMUST00000150404.10, ENSMUST00000152988.9, ENSMUST00000166920.10, ENSMUST00000173920.9, ENSMUST00000174211.8, ENSMUST00000174656.2, ENSMUST00000238951.2, ENSMUST00000238983.2, ENSMUST00000239075.2

Found 215 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGAATCAATTCGGTCCAGCTGCTGGAAGGAATGGGCCAGCAGGCTaGCAGGATCTTGTAGCCCATGCTCTGTGGACCGAGAGGCCAGGC +
Preference number: 1 (lower is better)
Translates to: VNQFGPAAGRNGPAG*QDLVAHALWTERPG
Trigger: GCCTGGCCTCTCGGTCCACAGAGCATGGGCTACAAGATCCTGGCAGCCTGCTGGCCCATTCCTTCCAGCAGCTGGACCGAATTGATTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
3UTR CCA 90 bp ACCTGCTCACTCAGTGAATCAATTCGGTCCAGCTGCTGGAAGGAATaGGCCAGCAGGCTGCCAGGATCTTGTAGCCCATGCTCTGTGGAC +
Preference number: 1 (lower is better)
Translates to: TCSLSESIRSSCWKE*ASRLPGSCSPCSVD
Trigger: GTCCACAGAGCATGGGCTACAAGATCCTGGCAGCCTGCTGGCCCATTCCTTCCAGCAGCTGGACCGAATTGATTCACTGAGTGAGCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
3UTR TCA 90 bp TCTCCGGGCTCCCATCCAGGGATGAAGGGTGGTAATGATGGCATATaGCTGCCTATTTCTGGGGCTTCAGTGTGTAAGTCCCCTCCTCCC +
Preference number: 1 (lower is better)
Translates to: SPGSHPGMKGGNDGI*LPISGASVCKSPPP
Trigger: GGGAGGAGGGGACTTACACACTGAAGCCCCAGAAATAGGCAGTCATATGCCATCATTACCACCCTTCATCCCTGGATGGGAGCCCGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
3UTR GCA 90 bp GGAACCAGCAAATCACCAATGGGAAACTGGGGCCTCAGGACTGCTTaGTGCAGCTCCCTTTTGCAGAAAGGCCCTTCGCTTTACCAGAAG +
Preference number: 1 (lower is better)
Translates to: GTSKSPMGNWGLRTA*CSSLLQKGPSLYQK
Trigger: CTTCTGGTAAAGCGAAGGGCCTTTCTGCAAAAGGGAGCTGCAGCAAGCAGTCCTGAGGCCCCAGTTTCCCATTGGTGATTTGCTGGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
3UTR GCA 90 bp GTAGGGAACCAGCAAATCACCAATGGGAAACTGGGGCCTCAGGACTaGTTGCTGCAGCTCCCTTTTGCAGAAAGGCCCTTCGCTTTACCA +
Preference number: 1 (lower is better)
Translates to: VGNQQITNGKLGPQD*LLQLPFAERPFALP
Trigger: TGGTAAAGCGAAGGGCCTTTCTGCAAAAGGGAGCTGCAGCAAGCAGTCCTGAGGCCCCAGTTTCCCATTGGTGATTTGCTGGTTCCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
3UTR CCA 90 bp AACCGCTTTAGCCTCTGGCTATGTAGGGAACCAGCAAATCACCAATaGGAAACTGGGGCCTCAGGACTGCTTGCTGCAGCTCCCTTTTGC +
Preference number: 1 (lower is better)
Translates to: NRFSLWLCREPANHQ*ETGASGLLAAAPFC
Trigger: GCAAAAGGGAGCTGCAGCAAGCAGTCCTGAGGCCCCAGTTTCCCATTGGTGATTTGCTGGTTCCCTACATAGCCAGAGGCTAAAGCGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
3UTR GCA 90 bp TTTTTGCAGGAGCAGGACCCCAGATGTTCCTCCAAGAAGGACACCTaGTCACTCAGTGAATCAATTCGGTCCAGCTGCTGGAAGGAATGG +
Preference number: 1 (lower is better)
Translates to: FLQEQDPRCSSKKDT*SLSESIRSSCWKEW
Trigger: CCATTCCTTCCAGCAGCTGGACCGAATTGATTCACTGAGTGAGCAGGTGTCCTTCTTGGAGGAACATCTGGGGTCCTGCTCCTGCAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
3UTR-3UTR TCA 90 bp CCACTGAAGAGTCACACAAGACCCCACTCCCCATGCCCAAGTCCTAGGAACCTCCCACCAGACAGCGCCTaGACTCTGGCTACAAGGGAT +
Preference number: 2 (lower is better)
Translates to: PLKSHTRPHSPCPSPRNLPPDSA*TLATRD
Trigger: ATCCCTTGTAGCCAGAGTTCAGGCGCTGTCTGGTGG...GAGGTTCCTAGGACTTGGGCATGGGGAGTGGGGTCTTGTGTGACTCTTCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000139801.9
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
3UTR CAA 90 bp CCAATGGGAAACTGGGGCCTCAGGACTGCTTGCTGCAGCTCCCTTTaGCAGAAAGGCCCTTCGCTTTACCAGAAGCCTACAAGGCAGGAG +
Preference number: 2 (lower is better)
Translates to: PMGNWGLRTACCSSL*QKGPSLYQKPTRQE
Trigger: CTCCTGCCTTGTAGGCTTCTGGTAAAGCGAAGGGCCTTTCTGCAAAAGGGAGCTGCAGCAAGCAGTCCTGAGGCCCCAGTTTCCCATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
3UTR-3UTR TCA 90 bp ATCCCCACCTTACCACTTAGACAGGGAGCCCCACTGAAGAGTCACACAAGACCCCCACCAGACAGCGCCTaGACTCTGGCTACAAGGGAT +
Preference number: 2 (lower is better)
Translates to: IPTLPLRQGAPLKSHTRPPPDSA*TLATRD
Trigger: ATCCCTTGTAGCCAGAGTTCAGGCGCTGTCTGGTGG...GGGTCTTGTGTGACTCTTCAGTGGGGCTCCCTGTCTAAGTGGTAAGGTGGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000139801.9
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
3UTR-3UTR TCA 90 bp CACACAAGACCCCACTCCCCATGCCCAAGTCCTAGGAACCTCCTAAGAAAGAGGCCACCAGACAGCGCCTaGACTCTGGCTACAAGGGAT +
Preference number: 2 (lower is better)
Translates to: HTRPHSPCPSPRNLLRKRPPDSA*TLATRD
Trigger: ATCCCTTGTAGCCAGAGTTCAGGCGCTGTCTGGTGG...CCTCTTTCTTAGGAGGTTCCTAGGACTTGGGCATGGGGAGTGGGGTCTTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000139801.9
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
3UTR-3UTR GCA 90 bp ACCTTACCACTTAGACAGGGAGCCCCACTGAAGAGTCACACAAGACCCCACTCCAGACCCCACTCCCCATaGCCAAGTCCTAGGAACCTC +
Preference number: 2 (lower is better)
Translates to: TLPLRQGAPLKSHTRPHSRPHSP*PSPRNL
Trigger: GAGGTTCCTAGGACTTGGGCATGGGGAGTGGGGTCT...GGAGTGGGGTCTTGTGTGACTCTTCAGTGGGGCTCCCTGTCTAAGTGGTAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000139801.9
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
3UTR-3UTR CCA 90 bp CCCTTTTGCAGAAAGGCCCTTCGCTTTACCAGAAGCCTACAAGGCAGGAGTGTCAGCTGCTGGAAGGAATaGGCCAGCAGGCTGCCAGGA +
Preference number: 2 (lower is better)
Translates to: PFCRKALRFTRSLQGRSVSCWKE*ASRLPG
Trigger: TCCTGGCAGCCTGCTGGCCCATTCCTTCCAGCAGCT...GACACTCCTGCCTTGTAGGCTTCTGGTAAAGCGAAGGGCCTTTCTGCAAAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
3UTR-3UTR TCA 90 bp GAGACAATCCCCACCTTACCACTTAGACAGGGAGCCCCACTGAAGAGTCACACACCACCAGACAGCGCCTaGACTCTGGCTACAAGGGAT +
Preference number: 2 (lower is better)
Translates to: ETIPTLPLRQGAPLKSHTPPDSA*TLATRD
Trigger: ATCCCTTGTAGCCAGAGTTCAGGCGCTGTCTGGTGG...TGTGTGACTCTTCAGTGGGGCTCCCTGTCTAAGTGGTAAGGTGGGGATTGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000139801.9
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
3UTR-3UTR TCA 90 bp CCCACCTTACCACTTAGACAGGGAGCCCCACTGAAGAGTCACACAAGACCCCACAAGAAAGAGGGACAATaGGGCAGGGCCTTCTGCTCA +
Preference number: 2 (lower is better)
Translates to: PTLPLRQGAPLKSHTRPHKKEGQ*GRAFCS
Trigger: TGAGCAGAAGGCCCTGCCTCATTGTCCCTCTTTCTT...GTGGGGTCTTGTGTGACTCTTCAGTGGGGCTCCCTGTCTAAGTGGTAAGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000139801.9
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
3UTR-3UTR GCA 90 bp CCTTTTGCAGAAAGGCCCTTCGCTTTACCAGAAGCCTACAAGGCAGGAGTGTCCAGACCCCACTCCCCATaGCCAAGTCCTAGGAACCTC +
Preference number: 2 (lower is better)
Translates to: PFAERPFALPEAYKAGVSRPHSP*PSPRNL
Trigger: GAGGTTCCTAGGACTTGGGCATGGGGAGTGGGGTCT...GGACACTCCTGCCTTGTAGGCTTCTGGTAAAGCGAAGGGCCTTTCTGCAAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
3UTR CAA 90 bp GGGAACCAGCAAATCACCAATGGGAAACTGGGGCCTCAGGACTGCTaGCTGCAGCTCCCTTTTGCAGAAAGGCCCTTCGCTTTACCAGAA +
Preference number: 2 (lower is better)
Translates to: GNQQITNGKLGPQDC*LQLPFAERPFALPE
Trigger: TTCTGGTAAAGCGAAGGGCCTTTCTGCAAAAGGGAGCTGCAGCAAGCAGTCCTGAGGCCCCAGTTTCCCATTGGTGATTTGCTGGTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
3UTR-3UTR TCA 90 bp CTGAAGAGTCACACAAGACCCCACTCCCCATGCCCAAGTCCTAGGAACCTCCTAAAGAAAGAGGGACAATaGGGCAGGGCCTTCTGCTCA +
Preference number: 2 (lower is better)
Translates to: LKSHTRPHSPCPSPRNLLKKEGQ*GRAFCS
Trigger: TGAGCAGAAGGCCCTGCCTCATTGTCCCTCTTTCTT...TAGGAGGTTCCTAGGACTTGGGCATGGGGAGTGGGGTCTTGTGTGACTCTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000139801.9
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
3UTR-3UTR TCA 90 bp ACCTTACCACTTAGACAGGGAGCCCCACTGAAGAGTCACACAAGACCCCACTCCAAGAAAGAGGGACAATaGGGCAGGGCCTTCTGCTCA +
Preference number: 2 (lower is better)
Translates to: TLPLRQGAPLKSHTRPHSKKEGQ*GRAFCS
Trigger: TGAGCAGAAGGCCCTGCCTCATTGTCCCTCTTTCTT...GGAGTGGGGTCTTGTGTGACTCTTCAGTGGGGCTCCCTGTCTAAGTGGTAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000139801.9
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
3UTR-3UTR CCA 90 bp TCCCTTTTGCAGAAAGGCCCTTCGCTTTACCAGAAGCCTACAAGGCAGGAGTGTATTCGGTCCAGCTGCTaGAAGGAATGGGCCAGCAGG +
Preference number: 2 (lower is better)
Translates to: SLLQKGPSLYQKPTRQECIRSSC*KEWASR
Trigger: CCTGCTGGCCCATTCCTTCCAGCAGCTGGACCGAAT...ACACTCCTGCCTTGTAGGCTTCTGGTAAAGCGAAGGGCCTTTCTGCAAAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
3UTR CAA 90 bp CTGCTCTATCCAGCCTGGGTGGTGAGAGGTTATCACAGATCTTTTTaGCAGGAGCAGGACCCCAGATGTTCCTCCAAGAAGGACACCTGC +
Preference number: 2 (lower is better)
Translates to: LLYPAWVVRGYHRSF*QEQDPRCSSKKDTC
Trigger: GCAGGTGTCCTTCTTGGAGGAACATCTGGGGTCCTGCTCCTGCAAAAAAGATCTGTGATAACCTCTCACCACCCAGGCTGGATAGAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000131112.2
ENSMUST00000139801.9
3UTR-3UTR TCA 90 bp AGACCCCACTCCCCATGCCCAAGTCCTAGGAACCTCCTAAGAAAGAGGGACAATAAGAAAGAGGGACAATaGGGCAGGGCCTTCTGCTCA +
Preference number: 2 (lower is better)
Translates to: RPHSPCPSPRNLLRKRDNKKEGQ*GRAFCS
Trigger: TGAGCAGAAGGCCCTGCCTCATTGTCCCTCTTTCTT...ATTGTCCCTCTTTCTTAGGAGGTTCCTAGGACTTGGGCATGGGGAGTGGGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000139801.9
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
3UTR-3UTR TCA 90 bp CCCTTTTGCAGAAAGGCCCTTCGCTTTACCAGAAGCCTACAAGGCAGGAGTGTCCACCTGCTCACTCAGTaGATCAATTCGGTCCAGCTG +
Preference number: 2 (lower is better)
Translates to: PFCRKALRFTRSLQGRSVHLLTQ*INSVQL
Trigger: CAGCTGGACCGAATTGATTCACTGAGTGAGCAGGTG...GACACTCCTGCCTTGTAGGCTTCTGGTAAAGCGAAGGGCCTTTCTGCAAAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
3UTR-3UTR TCA 90 bp ATTATGACAAAGATGGAGACAATCCCCACCTTACCACTTAGACAGGGAGCCCCACCACCAGACAGCGCCTaGACTCTGGCTACAAGGGAT +
Preference number: 2 (lower is better)
Translates to: IMTKMETIPTLPLRQGAPPPDSA*TLATRD
Trigger: ATCCCTTGTAGCCAGAGTTCAGGCGCTGTCTGGTGG...TGGGGCTCCCTGTCTAAGTGGTAAGGTGGGGATTGTCTCCATCTTTGTCATAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000139801.9
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
3UTR-3UTR GCA 90 bp ATTATGACAAAGATGGAGACAATCCCCACCTTACCACTTAGACAGGGAGCCCCAAGACCCCACTCCCCATaGCCAAGTCCTAGGAACCTC +
Preference number: 2 (lower is better)
Translates to: IMTKMETIPTLPLRQGAPRPHSP*PSPRNL
Trigger: GAGGTTCCTAGGACTTGGGCATGGGGAGTGGGGTCT...TGGGGCTCCCTGTCTAAGTGGTAAGGTGGGGATTGTCTCCATCTTTGTCATAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000139801.9
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
3UTR-3UTR TCA 90 bp AGGCTGAAGAACCGCTTTAGCCTCTGGCTATGTAGGGAACCAGCAAATCACCAAAAGAAAGAGGGACAATaGGGCAGGGCCTTCTGCTCA +
Preference number: 2 (lower is better)
Translates to: RLKNRFSLWLCREPANHQKKEGQ*GRAFCS
Trigger: TGAGCAGAAGGCCCTGCCTCATTGTCCCTCTTTCTT...TTGGTGATTTGCTGGTTCCCTACATAGCCAGAGGCTAAAGCGGTTCTTCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
3UTR-3UTR GCA 90 bp TCAAGTCTCAGCTTTATTATGACAAAGATGGAGACAATCCCCACCTTACCACTTGGATCTTGTAGCCCATaGTCTGTGGACCGAGAGGCC +
Preference number: 2 (lower is better)
Translates to: SSLSFIMTKMETIPTLPLGSCSP*SVDREA
Trigger: GGCCTCTCGGTCCACAGAGCATGGGCTACAAGATCC...AAGTGGTAAGGTGGGGATTGTCTCCATCTTTGTCATAATAAAGCTGAGACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
3UTR-3UTR TCA 90 bp AGCTTTATTATGACAAAGATGGAGACAATCCCCACCTTACCACTTAGACAGGGAAAGAAAGAGGGACAATaGGGCAGGGCCTTCTGCTCA +
Preference number: 2 (lower is better)
Translates to: SFIMTKMETIPTLPLRQGKKEGQ*GRAFCS
Trigger: TGAGCAGAAGGCCCTGCCTCATTGTCCCTCTTTCTT...TCCCTGTCTAAGTGGTAAGGTGGGGATTGTCTCCATCTTTGTCATAATAAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000139801.9
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
3UTR-3UTR TCA 90 bp CTCAGCTTTATTATGACAAAGATGGAGACAATCCCCACCTTACCACTTAGACAGAAGAAAGAGGGACAATaGGGCAGGGCCTTCTGCTCA +
Preference number: 2 (lower is better)
Translates to: LSFIMTKMETIPTLPLRQKKEGQ*GRAFCS
Trigger: TGAGCAGAAGGCCCTGCCTCATTGTCCCTCTTTCTT...CTGTCTAAGTGGTAAGGTGGGGATTGTCTCCATCTTTGTCATAATAAAGCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000139801.9
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
3UTR-3UTR TCA 90 bp AGTCTCAGCTTTATTATGACAAAGATGGAGACAATCCCCACCTTACCACTTAGAAAGAAAGAGGGACAATaGGGCAGGGCCTTCTGCTCA +
Preference number: 2 (lower is better)
Translates to: SLSFIMTKMETIPTLPLRKKEGQ*GRAFCS
Trigger: TGAGCAGAAGGCCCTGCCTCATTGTCCCTCTTTCTT...TCTAAGTGGTAAGGTGGGGATTGTCTCCATCTTTGTCATAATAAAGCTGAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
3UTR-3UTR TCA 90 bp ATTATGACAAAGATGGAGACAATCCCCACCTTACCACTTAGACAGGGAGCCCCAGTCTCAGCTTTATTATaGCAAAGATGGAGACAATCC +
Preference number: 2 (lower is better)
Translates to: IMTKMETIPTLPLRQGAPVSALL*QRWRQS
Trigger: GGATTGTCTCCATCTTTGTCATAATAAAGCTGAGAC...TGGGGCTCCCTGTCTAAGTGGTAAGGTGGGGATTGTCTCCATCTTTGTCATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
3UTR GCA 72 bp GAATGGGCCAGCAGGCTGCCAGGATCTTGTAGCCCATaGTCTGTGGACCGAGAGGCCAGGCTGTGCAGTGGG +
Preference number: 3 (lower is better)
Translates to: EWASRLPGSCSP*SVDREARLCSG
Trigger: CCCACTGCACAGCCTGGCCTCTCGGTCCACAGAGCATGGGCTACAAGATCCTGGCAGCCTGCTGGCCCATTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
3UTR CCA 72 bp CTCAGTGAATCAATTCGGTCCAGCTGCTGGAAGGAATaGGCCAGCAGGCTGCCAGGATCTTGTAGCCCATGC +
Preference number: 3 (lower is better)
Translates to: LSESIRSSCWKE*ASRLPGSCSPC
Trigger: GCATGGGCTACAAGATCCTGGCAGCCTGCTGGCCCATTCCTTCCAGCAGCTGGACCGAATTGATTCACTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
3UTR GCA 72 bp GAGCAGGACCCCAGATGTTCCTCCAAGAAGGACACCTaGTCACTCAGTGAATCAATTCGGTCCAGCTGCTGG +
Preference number: 3 (lower is better)
Translates to: EQDPRCSSKKDT*SLSESIRSSCW
Trigger: CCAGCAGCTGGACCGAATTGATTCACTGAGTGAGCAGGTGTCCTTCTTGGAGGAACATCTGGGGTCCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
3UTR GCA 72 bp ACTGGGGCCTCAGGACTGCTTGCTGCAGCTCCCTTTTaGAGAAAGGCCCTTCGCTTTACCAGAAGCCTACAA +
Preference number: 3 (lower is better)
Translates to: TGASGLLAAAPF*RKALRFTRSLQ
Trigger: TTGTAGGCTTCTGGTAAAGCGAAGGGCCTTTCTGCAAAAGGGAGCTGCAGCAAGCAGTCCTGAGGCCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
3UTR GCA 72 bp CAGCAAATCACCAATGGGAAACTGGGGCCTCAGGACTaGTTGCTGCAGCTCCCTTTTGCAGAAAGGCCCTTC +
Preference number: 3 (lower is better)
Translates to: QQITNGKLGPQD*LLQLPFAERPF
Trigger: GAAGGGCCTTTCTGCAAAAGGGAGCTGCAGCAAGCAGTCCTGAGGCCCCAGTTTCCCATTGGTGATTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
3UTR CCA 72 bp AGCCTCTGGCTATGTAGGGAACCAGCAAATCACCAATaGGAAACTGGGGCCTCAGGACTGCTTGCTGCAGCT +
Preference number: 3 (lower is better)
Translates to: SLWLCREPANHQ*ETGASGLLAAA
Trigger: AGCTGCAGCAAGCAGTCCTGAGGCCCCAGTTTCCCATTGGTGATTTGCTGGTTCCCTACATAGCCAGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
3UTR CCA 72 bp AGAAGTGCCTGGAGACCAGAGGTCTCTTTCAGAGAGTaGGTAGAGTTCTTTCTCCGGGCTCCCATCCAGGGA +
Preference number: 3 (lower is better)
Translates to: RSAWRPEVSFRE*VEFFLRAPIQG
Trigger: TCCCTGGATGGGAGCCCGGAGAAAGAACTCTACCCACTCTCTGAAAGAGACCTCTGGTCTCCAGGCACTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
3UTR GCA 72 bp AAATCACCAATGGGAAACTGGGGCCTCAGGACTGCTTaGTGCAGCTCCCTTTTGCAGAAAGGCCCTTCGCTT +
Preference number: 3 (lower is better)
Translates to: KSPMGNWGLRTA*CSSLLQKGPSL
Trigger: AAGCGAAGGGCCTTTCTGCAAAAGGGAGCTGCAGCAAGCAGTCCTGAGGCCCCAGTTTCCCATTGGTGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
3UTR-3UTR CAA 90 bp GAGACAATCCCCACCTTACCACTTAGACAGGGAGCCCCACTGAAGAGTCACACATATCACAGATCTTTTTaGCAGGAGCAGGACCCCAGA +
Preference number: 3 (lower is better)
Translates to: ETIPTLPLRQGAPLKSHTYHRSF*QEQDPR
Trigger: TCTGGGGTCCTGCTCCTGCAAAAAAGATCTGTGATA...TGTGTGACTCTTCAGTGGGGCTCCCTGTCTAAGTGGTAAGGTGGGGATTGTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000131112.2
ENSMUST00000139801.9
3UTR TCA 72 bp TCCCATCCAGGGATGAAGGGTGGTAATGATGGCATATaGCTGCCTATTTCTGGGGCTTCAGTGTGTAAGTCC +
Preference number: 3 (lower is better)
Translates to: SHPGMKGGNDGI*LPISGASVCKS
Trigger: GGACTTACACACTGAAGCCCCAGAAATAGGCAGTCATATGCCATCATTACCACCCTTCATCCCTGGATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
3UTR TCA 72 bp TGGGTAGAGTTCTTTCTCCGGGCTCCCATCCAGGGATaGAGGGTGGTAATGATGGCATATGACTGCCTATTT +
Preference number: 3 (lower is better)
Translates to: WVEFFLRAPIQG*RVVMMAYDCLF
Trigger: AAATAGGCAGTCATATGCCATCATTACCACCCTTCATCCCTGGATGGGAGCCCGGAGAAAGAACTCTACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
3UTR TCA 72 bp CCCCCATTGACAACAGCTCAAGTCTCAGCTTTATTATaGCAAAGATGGAGACAATCCCCACCTTACCACTTA +
Preference number: 3 (lower is better)
Translates to: PPLTTAQVSALL*QRWRQSPPYHL
Trigger: TAAGTGGTAAGGTGGGGATTGTCTCCATCTTTGTCATAATAAAGCTGAGACTTGAGCTGTTGTCAATGGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
CDS-3UTR CCA 90 bp GGGACAATGAGGCAGGGCCTTCTGCTCATAGGCACCACCAGACAGCGCCTGAACTCCTGCTGTGGGGTTTaGGGCCACCGGGGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: GTMRQGLLLIGTTRQRLNSCCGV*GHRGGP
Trigger: GGGCCCTCCCCGGTGGCCCCAAACCCCACAGCAGGA...GTTCAGGCGCTGTCTGGTGGTGCCTATGAGCAGAAGGCCCTGCCTCATTGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp AGGGACAATGAGGCAGGGCCTTCTGCTCATAGGCACCACCAGACAGCGCCTGAATCCTGCTGTGGGGTTTaGGGCCACCGGGGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: RDNEAGPSAHRHHQTAPESCCGV*GHRGGP
Trigger: GGGCCCTCCCCGGTGGCCCCAAACCCCACAGCAGGA...TTCAGGCGCTGTCTGGTGGTGCCTATGAGCAGAAGGCCCTGCCTCATTGTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp CCCCACTCCCCATGCCCAAGTCCTAGGAACCTCCTAAGAAAGAGGGACAATGAGTCCTGCTGTGGGGTTTaGGGCCACCGGGGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: PHSPCPSPRNLLRKRDNESCCGV*GHRGGP
Trigger: GGGCCCTCCCCGGTGGCCCCAAACCCCACAGCAGGA...CTCATTGTCCCTCTTTCTTAGGAGGTTCCTAGGACTTGGGCATGGGGAGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp CACACAAGACCCCACTCCCCATGCCCAAGTCCTAGGAACCTCCTAAGAAAGAGGTCCTGCTGTGGGGTTTaGGGCCACCGGGGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: HTRPHSPCPSPRNLLRKRSCCGV*GHRGGP
Trigger: GGGCCCTCCCCGGTGGCCCCAAACCCCACAGCAGGA...CCTCTTTCTTAGGAGGTTCCTAGGACTTGGGCATGGGGAGTGGGGTCTTGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp ACCTTACCACTTAGACAGGGAGCCCCACTGAAGAGTCACACAAGACCCCACTCCTCCTGCTGTGGGGTTTaGGGCCACCGGGGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: TLPLRQGAPLKSHTRPHSSCCGV*GHRGGP
Trigger: GGGCCCTCCCCGGTGGCCCCAAACCCCACAGCAGGA...GGAGTGGGGTCTTGTGTGACTCTTCAGTGGGGCTCCCTGTCTAAGTGGTAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp CTGAACTCTGGCTACAAGGGATCTAGGGATGACTGCTCTATCCAGCCTGGGTGGTCCTGCTGTGGGGTTTaGGGCCACCGGGGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: LNSGYKGSRDDCSIQPGWSCCGV*GHRGGP
Trigger: GGGCCCTCCCCGGTGGCCCCAAACCCCACAGCAGGA...CCACCCAGGCTGGATAGAGCAGTCATCCCTAGATCCCTTGTAGCCAGAGTTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp CTGAAGAGTCACACAAGACCCCACTCCCCATGCCCAAGTCCTAGGAACCTCCTATCCTGCTGTGGGGTTTaGGGCCACCGGGGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: LKSHTRPHSPCPSPRNLLSCCGV*GHRGGP
Trigger: GGGCCCTCCCCGGTGGCCCCAAACCCCACAGCAGGA...TAGGAGGTTCCTAGGACTTGGGCATGGGGAGTGGGGTCTTGTGTGACTCTTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp CTGGGGCCTCAGGACTGCTTGCTGCAGCTCCCTTTTGCAGAAAGGCCCTTCGCTGCAGCGCGTCCCATCTaGAGATGGGCTTTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: LGPQDCLLQLPFAERPFAAARPI*RWALSL
Trigger: GAGGGACAAAGCCCATCTGCAGATGGGACGCGCTGC...AGCGAAGGGCCTTTCTGCAAAAGGGAGCTGCAGCAAGCAGTCCTGAGGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
CDS-3UTR CCA 90 bp CTGGCTACAAGGGATCTAGGGATGACTGCTCTATCCAGCCTGGGTGGTGAGAGGCCCCAGGGAGCCCACTaGTCCTCTTCCAACCAGGGC +
Preference number: 4 (lower is better)
Translates to: LATRDLGMTALSSLGGERPQGAH*SSSNQG
Trigger: GCCCTGGTTGGAAGAGGACCAGTGGGCTCCCTGGGG...CCTCTCACCACCCAGGCTGGATAGAGCAGTCATCCCTAGATCCCTTGTAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp CGCCTGAACTCTGGCTACAAGGGATCTAGGGATGACTGCTCTATCCAGCCTGGGTGTCCACTCCTGCTGTaGGGTTTGGGGCCACCGGGG +
Preference number: 4 (lower is better)
Translates to: RLNSGYKGSRDDCSIQPGCPLLL*GLGPPG
Trigger: CCCCGGTGGCCCCAAACCCCACAGCAGGAGTGGACA...CCCAGGCTGGATAGAGCAGTCATCCCTAGATCCCTTGTAGCCAGAGTTCAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp GGGACAATGAGGCAGGGCCTTCTGCTCATAGGCACCACCAGACAGCGCCTGAACAGCTGCTGGAAGGAATaGGCCAGCAGGCTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: GTMRQGLLLIGTTRQRLNSCWKE*ASRLPG
Trigger: TCCTGGCAGCCTGCTGGCCCATTCCTTCCAGCAGCT...GTTCAGGCGCTGTCTGGTGGTGCCTATGAGCAGAAGGCCCTGCCTCATTGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp AGGGACAATGAGGCAGGGCCTTCTGCTCATAGGCACCACCAGACAGCGCCTGAAGCAGCGCGTCCCATCTaGAGATGGGCTTTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: RDNEAGPSAHRHHQTAPEAARPI*RWALSL
Trigger: GAGGGACAAAGCCCATCTGCAGATGGGACGCGCTGC...TTCAGGCGCTGTCTGGTGGTGCCTATGAGCAGAAGGCCCTGCCTCATTGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp GGGACAATGAGGCAGGGCCTTCTGCTCATAGGCACCACCAGACAGCGCCTGAACGGATCTTGTAGCCCATaGTCTGTGGACCGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: GTMRQGLLLIGTTRQRLNGSCSP*SVDREA
Trigger: GGCCTCTCGGTCCACAGAGCATGGGCTACAAGATCC...GTTCAGGCGCTGTCTGGTGGTGCCTATGAGCAGAAGGCCCTGCCTCATTGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp CTGAACTCTGGCTACAAGGGATCTAGGGATGACTGCTCTATCCAGCCTGGGTGGAGGGCAGGGTTGCCCTaGTCCACAAGCCCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LNSGYKGSRDDCSIQPGWRAGLP*STSPRE
Trigger: CTCCCTGGGGCTTGTGGAGCAGGGCAACCCTGCCCT...CCACCCAGGCTGGATAGAGCAGTCATCCCTAGATCCCTTGTAGCCAGAGTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
CDS-3UTR CCA 90 bp CAGCGCCTGAACTCTGGCTACAAGGGATCTAGGGATGACTGCTCTATCCAGCCTCCCCAGGGAGCCCACTaGTCCTCTTCCAACCAGGGC +
Preference number: 4 (lower is better)
Translates to: QRLNSGYKGSRDDCSIQPPQGAH*SSSNQG
Trigger: GCCCTGGTTGGAAGAGGACCAGTGGGCTCCCTGGGG...AGGCTGGATAGAGCAGTCATCCCTAGATCCCTTGTAGCCAGAGTTCAGGCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp ATCCCCACCTTACCACTTAGACAGGGAGCCCCACTGAAGAGTCACACAAGACCCCCCCAGGGAGCCCACTaGTCCTCTTCCAACCAGGGC +
Preference number: 4 (lower is better)
Translates to: IPTLPLRQGAPLKSHTRPPQGAH*SSSNQG
Trigger: GCCCTGGTTGGAAGAGGACCAGTGGGCTCCCTGGGG...GGGTCTTGTGTGACTCTTCAGTGGGGCTCCCTGTCTAAGTGGTAAGGTGGGGAT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp CCATGCCCAAGTCCTAGGAACCTCCTAAGAAAGAGGGACAATGAGGCAGGGCCTTGTCCACTCCTGCTGTaGGGTTTGGGGCCACCGGGG +
Preference number: 4 (lower is better)
Translates to: PCPSPRNLLRKRDNEAGPCPLLL*GLGPPG
Trigger: CCCCGGTGGCCCCAAACCCCACAGCAGGAGTGGACA...AGGCCCTGCCTCATTGTCCCTCTTTCTTAGGAGGTTCCTAGGACTTGGGCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp ATCCCCACCTTACCACTTAGACAGGGAGCCCCACTGAAGAGTCACACAAGACCCTGTCCACTCCTGCTGTaGGGTTTGGGGCCACCGGGG +
Preference number: 4 (lower is better)
Translates to: IPTLPLRQGAPLKSHTRPCPLLL*GLGPPG
Trigger: CCCCGGTGGCCCCAAACCCCACAGCAGGAGTGGACA...GGGTCTTGTGTGACTCTTCAGTGGGGCTCCCTGTCTAAGTGGTAAGGTGGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp CAGCGCCTGAACTCTGGCTACAAGGGATCTAGGGATGACTGCTCTATCCAGCCTTGTCCACTCCTGCTGTaGGGTTTGGGGCCACCGGGG +
Preference number: 4 (lower is better)
Translates to: QRLNSGYKGSRDDCSIQPCPLLL*GLGPPG
Trigger: CCCCGGTGGCCCCAAACCCCACAGCAGGAGTGGACA...AGGCTGGATAGAGCAGTCATCCCTAGATCCCTTGTAGCCAGAGTTCAGGCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp CTGAACTCTGGCTACAAGGGATCTAGGGATGACTGCTCTATCCAGCCTGGGTGGTGTCCACTCCTGCTGTaGGGTTTGGGGCCACCGGGG +
Preference number: 4 (lower is better)
Translates to: LNSGYKGSRDDCSIQPGWCPLLL*GLGPPG
Trigger: CCCCGGTGGCCCCAAACCCCACAGCAGGAGTGGACA...CCACCCAGGCTGGATAGAGCAGTCATCCCTAGATCCCTTGTAGCCAGAGTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp CGCCTGAACTCTGGCTACAAGGGATCTAGGGATGACTGCTCTATCCAGCCTGGGGCAGCGCGTCCCATCTaGAGATGGGCTTTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: RLNSGYKGSRDDCSIQPGAARPI*RWALSL
Trigger: GAGGGACAAAGCCCATCTGCAGATGGGACGCGCTGC...CCCAGGCTGGATAGAGCAGTCATCCCTAGATCCCTTGTAGCCAGAGTTCAGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp CCACTGAAGAGTCACACAAGACCCCACTCCCCATGCCCAAGTCCTAGGAACCTCCCTCCTCTCTCGCCATaGTGTCCACTCCTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: PLKSHTRPHSPCPSPRNLPPLSP*CPLLLW
Trigger: CCACAGCAGGAGTGGACAGCATGGCGAGAGAGGAGG...GAGGTTCCTAGGACTTGGGCATGGGGAGTGGGGTCTTGTGTGACTCTTCAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp GCTACAAGGGATCTAGGGATGACTGCTCTATCCAGCCTGGGTGGTGAGAGGTTACCCCAGGGAGCCCACTaGTCCTCTTCCAACCAGGGC +
Preference number: 4 (lower is better)
Translates to: ATRDLGMTALSSLGGERLPQGAH*SSSNQG
Trigger: GCCCTGGTTGGAAGAGGACCAGTGGGCTCCCTGGGG...TAACCTCTCACCACCCAGGCTGGATAGAGCAGTCATCCCTAGATCCCTTGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp GGGACAATGAGGCAGGGCCTTCTGCTCATAGGCACCACCAGACAGCGCCTGAACCCCTCCATTCCCACATaGAGGCTGGCATATTGCTGC +
Preference number: 4 (lower is better)
Translates to: GTMRQGLLLIGTTRQRLNPSIPT*RLAYCC
Trigger: GCAGCAATATGCCAGCCTCCATGTGGGAATGGAGGG...GTTCAGGCGCTGTCTGGTGGTGCCTATGAGCAGAAGGCCCTGCCTCATTGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp ATGGAGACAATCCCCACCTTACCACTTAGACAGGGAGCCCCACTGAAGAGTCACTGTCCACTCCTGCTGTaGGGTTTGGGGCCACCGGGG +
Preference number: 4 (lower is better)
Translates to: METIPTLPLRQGAPLKSHCPLLL*GLGPPG
Trigger: CCCCGGTGGCCCCAAACCCCACAGCAGGAGTGGACA...GTGACTCTTCAGTGGGGCTCCCTGTCTAAGTGGTAAGGTGGGGATTGTCTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp CCACTGAAGAGTCACACAAGACCCCACTCCCCATGCCCAAGTCCTAGGAACCTCAGCTGCTGGAAGGAATaGGCCAGCAGGCTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: PLKSHTRPHSPCPSPRNLSCWKE*ASRLPG
Trigger: TCCTGGCAGCCTGCTGGCCCATTCCTTCCAGCAGCT...GAGGTTCCTAGGACTTGGGCATGGGGAGTGGGGTCTTGTGTGACTCTTCAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp CGCCTGAACTCTGGCTACAAGGGATCTAGGGATGACTGCTCTATCCAGCCTGGGAGCTGCTGGAAGGAATaGGCCAGCAGGCTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: RLNSGYKGSRDDCSIQPGSCWKE*ASRLPG
Trigger: TCCTGGCAGCCTGCTGGCCCATTCCTTCCAGCAGCT...CCCAGGCTGGATAGAGCAGTCATCCCTAGATCCCTTGTAGCCAGAGTTCAGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp AGGGACAATGAGGCAGGGCCTTCTGCTCATAGGCACCACCAGACAGCGCCTGAAATTCGGTCCAGCTGCTaGAAGGAATGGGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RDNEAGPSAHRHHQTAPEIRSSC*KEWASR
Trigger: CCTGCTGGCCCATTCCTTCCAGCAGCTGGACCGAAT...TTCAGGCGCTGTCTGGTGGTGCCTATGAGCAGAAGGCCCTGCCTCATTGTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR TCA 90 bp GGGACAATGAGGCAGGGCCTTCTGCTCATAGGCACCACCAGACAGCGCCTGAACCACCTGCTCACTCAGTaGATCAATTCGGTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GTMRQGLLLIGTTRQRLNHLLTQ*INSVQL
Trigger: CAGCTGGACCGAATTGATTCACTGAGTGAGCAGGTG...GTTCAGGCGCTGTCTGGTGGTGCCTATGAGCAGAAGGCCCTGCCTCATTGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000102907.13
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp CCCCACTCCCCATGCCCAAGTCCTAGGAACCTCCTAAGAAAGAGGGACAATGAGTGGCAAGTATCTCCCTaGCATCCCACAGGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: PHSPCPSPRNLLRKRDNEWQVSP*HPTGQR
Trigger: CCGCTGCCCTGTGGGATGGCAGGGAGATACTTGCCA...CTCATTGTCCCTCTTTCTTAGGAGGTTCCTAGGACTTGGGCATGGGGAGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp ACCTTACCACTTAGACAGGGAGCCCCACTGAAGAGTCACACAAGACCCCACTCCTGGCAAGTATCTCCCTaGCATCCCACAGGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: TLPLRQGAPLKSHTRPHSWQVSP*HPTGQR
Trigger: CCGCTGCCCTGTGGGATGGCAGGGAGATACTTGCCA...GGAGTGGGGTCTTGTGTGACTCTTCAGTGGGGCTCCCTGTCTAAGTGGTAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp CCATGCCCAAGTCCTAGGAACCTCCTAAGAAAGAGGGACAATGAGGCAGGGCCTGCAGCGCGTCCCATCTaGAGATGGGCTTTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: PCPSPRNLLRKRDNEAGPAARPI*RWALSL
Trigger: GAGGGACAAAGCCCATCTGCAGATGGGACGCGCTGC...AGGCCCTGCCTCATTGTCCCTCTTTCTTAGGAGGTTCCTAGGACTTGGGCATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp ACCTTACCACTTAGACAGGGAGCCCCACTGAAGAGTCACACAAGACCCCACTCCGCAGCGCGTCCCATCTaGAGATGGGCTTTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: TLPLRQGAPLKSHTRPHSAARPI*RWALSL
Trigger: GAGGGACAAAGCCCATCTGCAGATGGGACGCGCTGC...GGAGTGGGGTCTTGTGTGACTCTTCAGTGGGGCTCCCTGTCTAAGTGGTAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp CACACAAGACCCCACTCCCCATGCCCAAGTCCTAGGAACCTCCTAAGAAAGAGGCCTCCTCTCTCGCCATaGTGTCCACTCCTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: HTRPHSPCPSPRNLLRKRPPLSP*CPLLLW
Trigger: CCACAGCAGGAGTGGACAGCATGGCGAGAGAGGAGG...CCTCTTTCTTAGGAGGTTCCTAGGACTTGGGCATGGGGAGTGGGGTCTTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp ACCTTACCACTTAGACAGGGAGCCCCACTGAAGAGTCACACAAGACCCCACTCCCCTCCTCTCTCGCCATaGTGTCCACTCCTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: TLPLRQGAPLKSHTRPHSPPLSP*CPLLLW
Trigger: CCACAGCAGGAGTGGACAGCATGGCGAGAGAGGAGG...GGAGTGGGGTCTTGTGTGACTCTTCAGTGGGGCTCCCTGTCTAAGTGGTAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp GGGACAATGAGGCAGGGCCTTCTGCTCATAGGCACCACCAGACAGCGCCTGAACGGGGCCAGCACCAACTaGAGTTTCTGTTCTAGCACA +
Preference number: 4 (lower is better)
Translates to: GTMRQGLLLIGTTRQRLNGASTN*SFCSST
Trigger: TGTGCTAGAACAGAAACTGCAGTTGGTGCTGGCCCC...GTTCAGGCGCTGTCTGGTGGTGCCTATGAGCAGAAGGCCCTGCCTCATTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp CTGGCTACAAGGGATCTAGGGATGACTGCTCTATCCAGCCTGGGTGGTGAGAGGGGATCTTGTAGCCCATaGTCTGTGGACCGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: LATRDLGMTALSSLGGERGSCSP*SVDREA
Trigger: GGCCTCTCGGTCCACAGAGCATGGGCTACAAGATCC...CCTCTCACCACCCAGGCTGGATAGAGCAGTCATCCCTAGATCCCTTGTAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp CGCCTGAACTCTGGCTACAAGGGATCTAGGGATGACTGCTCTATCCAGCCTGGGGGATCTTGTAGCCCATaGTCTGTGGACCGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: RLNSGYKGSRDDCSIQPGGSCSP*SVDREA
Trigger: GGCCTCTCGGTCCACAGAGCATGGGCTACAAGATCC...CCCAGGCTGGATAGAGCAGTCATCCCTAGATCCCTTGTAGCCAGAGTTCAGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp CCACTGAAGAGTCACACAAGACCCCACTCCCCATGCCCAAGTCCTAGGAACCTCGGATCTTGTAGCCCATaGTCTGTGGACCGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: PLKSHTRPHSPCPSPRNLGSCSP*SVDREA
Trigger: GGCCTCTCGGTCCACAGAGCATGGGCTACAAGATCC...GAGGTTCCTAGGACTTGGGCATGGGGAGTGGGGTCTTGTGTGACTCTTCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp ACCTTACCACTTAGACAGGGAGCCCCACTGAAGAGTCACACAAGACCCCACTCCAGCTGCTGGAAGGAATaGGCCAGCAGGCTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: TLPLRQGAPLKSHTRPHSSCWKE*ASRLPG
Trigger: TCCTGGCAGCCTGCTGGCCCATTCCTTCCAGCAGCT...GGAGTGGGGTCTTGTGTGACTCTTCAGTGGGGCTCCCTGTCTAAGTGGTAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp CTGAACTCTGGCTACAAGGGATCTAGGGATGACTGCTCTATCCAGCCTGGGTGGAGCTGCTGGAAGGAATaGGCCAGCAGGCTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LNSGYKGSRDDCSIQPGWSCWKE*ASRLPG
Trigger: TCCTGGCAGCCTGCTGGCCCATTCCTTCCAGCAGCT...CCACCCAGGCTGGATAGAGCAGTCATCCCTAGATCCCTTGTAGCCAGAGTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp CTGAAGAGTCACACAAGACCCCACTCCCCATGCCCAAGTCCTAGGAACCTCCTAAGCTGCTGGAAGGAATaGGCCAGCAGGCTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LKSHTRPHSPCPSPRNLLSCWKE*ASRLPG
Trigger: TCCTGGCAGCCTGCTGGCCCATTCCTTCCAGCAGCT...TAGGAGGTTCCTAGGACTTGGGCATGGGGAGTGGGGTCTTGTGTGACTCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp CCATGCCCAAGTCCTAGGAACCTCCTAAGAAAGAGGGACAATGAGGCAGGGCCTAGCTGCTGGAAGGAATaGGCCAGCAGGCTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: PCPSPRNLLRKRDNEAGPSCWKE*ASRLPG
Trigger: TCCTGGCAGCCTGCTGGCCCATTCCTTCCAGCAGCT...AGGCCCTGCCTCATTGTCCCTCTTTCTTAGGAGGTTCCTAGGACTTGGGCATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp CCACTGAAGAGTCACACAAGACCCCACTCCCCATGCCCAAGTCCTAGGAACCTCATTCGGTCCAGCTGCTaGAAGGAATGGGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PLKSHTRPHSPCPSPRNLIRSSC*KEWASR
Trigger: CCTGCTGGCCCATTCCTTCCAGCAGCTGGACCGAAT...GAGGTTCCTAGGACTTGGGCATGGGGAGTGGGGTCTTGTGTGACTCTTCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR TCA 90 bp AGGGACAATGAGGCAGGGCCTTCTGCTCATAGGCACCACCAGACAGCGCCTGAACACCTGCTCACTCAGTaGATCAATTCGGTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: RDNEAGPSAHRHHQTAPEHLLTQ*INSVQL
Trigger: CAGCTGGACCGAATTGATTCACTGAGTGAGCAGGTG...TTCAGGCGCTGTCTGGTGGTGCCTATGAGCAGAAGGCCCTGCCTCATTGTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000102907.13
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp GAGACAATCCCCACCTTACCACTTAGACAGGGAGCCCCACTGAAGAGTCACACATGGCAAGTATCTCCCTaGCATCCCACAGGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: ETIPTLPLRQGAPLKSHTWQVSP*HPTGQR
Trigger: CCGCTGCCCTGTGGGATGGCAGGGAGATACTTGCCA...TGTGTGACTCTTCAGTGGGGCTCCCTGTCTAAGTGGTAAGGTGGGGATTGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp GCTACAAGGGATCTAGGGATGACTGCTCTATCCAGCCTGGGTGGTGAGAGGTTAGCAGCGCGTCCCATCTaGAGATGGGCTTTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: ATRDLGMTALSSLGGERLAARPI*RWALSL
Trigger: GAGGGACAAAGCCCATCTGCAGATGGGACGCGCTGC...TAACCTCTCACCACCCAGGCTGGATAGAGCAGTCATCCCTAGATCCCTTGTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp GAGACAATCCCCACCTTACCACTTAGACAGGGAGCCCCACTGAAGAGTCACACAGCAGCGCGTCCCATCTaGAGATGGGCTTTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: ETIPTLPLRQGAPLKSHTAARPI*RWALSL
Trigger: GAGGGACAAAGCCCATCTGCAGATGGGACGCGCTGC...TGTGTGACTCTTCAGTGGGGCTCCCTGTCTAAGTGGTAAGGTGGGGATTGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp CCATGCCCAAGTCCTAGGAACCTCCTAAGAAAGAGGGACAATGAGGCAGGGCCTGGATCTTGTAGCCCATaGTCTGTGGACCGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: PCPSPRNLLRKRDNEAGPGSCSP*SVDREA
Trigger: GGCCTCTCGGTCCACAGAGCATGGGCTACAAGATCC...AGGCCCTGCCTCATTGTCCCTCTTTCTTAGGAGGTTCCTAGGACTTGGGCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp CTGGCTACAAGGGATCTAGGGATGACTGCTCTATCCAGCCTGGGTGGTGAGAGGCCCTCCATTCCCACATaGAGGCTGGCATATTGCTGC +
Preference number: 4 (lower is better)
Translates to: LATRDLGMTALSSLGGERPSIPT*RLAYCC
Trigger: GCAGCAATATGCCAGCCTCCATGTGGGAATGGAGGG...CCTCTCACCACCCAGGCTGGATAGAGCAGTCATCCCTAGATCCCTTGTAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp CCCACCTTACCACTTAGACAGGGAGCCCCACTGAAGAGTCACACAAGACCCCACCCCTCCATTCCCACATaGAGGCTGGCATATTGCTGC +
Preference number: 4 (lower is better)
Translates to: PTLPLRQGAPLKSHTRPHPSIPT*RLAYCC
Trigger: GCAGCAATATGCCAGCCTCCATGTGGGAATGGAGGG...GTGGGGTCTTGTGTGACTCTTCAGTGGGGCTCCCTGTCTAAGTGGTAAGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp AGACCCCACTCCCCATGCCCAAGTCCTAGGAACCTCCTAAGAAAGAGGGACAATAGCTGCTGGAAGGAATaGGCCAGCAGGCTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: RPHSPCPSPRNLLRKRDNSCWKE*ASRLPG
Trigger: TCCTGGCAGCCTGCTGGCCCATTCCTTCCAGCAGCT...ATTGTCCCTCTTTCTTAGGAGGTTCCTAGGACTTGGGCATGGGGAGTGGGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp CTGAACTCTGGCTACAAGGGATCTAGGGATGACTGCTCTATCCAGCCTGGGTGGATTCGGTCCAGCTGCTaGAAGGAATGGGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LNSGYKGSRDDCSIQPGWIRSSC*KEWASR
Trigger: CCTGCTGGCCCATTCCTTCCAGCAGCTGGACCGAAT...CCACCCAGGCTGGATAGAGCAGTCATCCCTAGATCCCTTGTAGCCAGAGTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp CAGGAGCAGGACCCCAGATGTTCCTCCAAGAAGGACACCTGCTCACTCAGTGAAATTCGGTCCAGCTGCTaGAAGGAATGGGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QEQDPRCSSKKDTCSLSEIRSSC*KEWASR
Trigger: CCTGCTGGCCCATTCCTTCCAGCAGCTGGACCGAAT...TTCACTGAGTGAGCAGGTGTCCTTCTTGGAGGAACATCTGGGGTCCTGCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131112.2
CDS-3UTR CCA 90 bp CAGCGCCTGAACTCTGGCTACAAGGGATCTAGGGATGACTGCTCTATCCAGCCTATTCGGTCCAGCTGCTaGAAGGAATGGGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QRLNSGYKGSRDDCSIQPIRSSC*KEWASR
Trigger: CCTGCTGGCCCATTCCTTCCAGCAGCTGGACCGAAT...AGGCTGGATAGAGCAGTCATCCCTAGATCCCTTGTAGCCAGAGTTCAGGCGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp CCCCACTCCCCATGCCCAAGTCCTAGGAACCTCCTAAGAAAGAGGGACAATGAGATTCGGTCCAGCTGCTaGAAGGAATGGGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PHSPCPSPRNLLRKRDNEIRSSC*KEWASR
Trigger: CCTGCTGGCCCATTCCTTCCAGCAGCTGGACCGAAT...CTCATTGTCCCTCTTTCTTAGGAGGTTCCTAGGACTTGGGCATGGGGAGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp CCATGCCCAAGTCCTAGGAACCTCCTAAGAAAGAGGGACAATGAGGCAGGGCCTATTCGGTCCAGCTGCTaGAAGGAATGGGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PCPSPRNLLRKRDNEAGPIRSSC*KEWASR
Trigger: CCTGCTGGCCCATTCCTTCCAGCAGCTGGACCGAAT...AGGCCCTGCCTCATTGTCCCTCTTTCTTAGGAGGTTCCTAGGACTTGGGCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR TCA 90 bp CGCCTGAACTCTGGCTACAAGGGATCTAGGGATGACTGCTCTATCCAGCCTGGGCACCTGCTCACTCAGTaGATCAATTCGGTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: RLNSGYKGSRDDCSIQPGHLLTQ*INSVQL
Trigger: CAGCTGGACCGAATTGATTCACTGAGTGAGCAGGTG...CCCAGGCTGGATAGAGCAGTCATCCCTAGATCCCTTGTAGCCAGAGTTCAGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000102907.13
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp ATGACAAAGATGGAGACAATCCCCACCTTACCACTTAGACAGGGAGCCCCACTGTGGCAAGTATCTCCCTaGCATCCCACAGGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: MTKMETIPTLPLRQGAPLWQVSP*HPTGQR
Trigger: CCGCTGCCCTGTGGGATGGCAGGGAGATACTTGCCA...CAGTGGGGCTCCCTGTCTAAGTGGTAAGGTGGGGATTGTCTCCATCTTTGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp ATGACAAAGATGGAGACAATCCCCACCTTACCACTTAGACAGGGAGCCCCACTGCCTCCTCTCTCGCCATaGTGTCCACTCCTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: MTKMETIPTLPLRQGAPLPPLSP*CPLLLW
Trigger: CCACAGCAGGAGTGGACAGCATGGCGAGAGAGGAGG...CAGTGGGGCTCCCTGTCTAAGTGGTAAGGTGGGGATTGTCTCCATCTTTGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp CCACTGAAGAGTCACACAAGACCCCACTCCCCATGCCCAAGTCCTAGGAACCTCGGGGCCAGCACCAACTaGAGTTTCTGTTCTAGCACA +
Preference number: 4 (lower is better)
Translates to: PLKSHTRPHSPCPSPRNLGASTN*SFCSST
Trigger: TGTGCTAGAACAGAAACTGCAGTTGGTGCTGGCCCC...GAGGTTCCTAGGACTTGGGCATGGGGAGTGGGGTCTTGTGTGACTCTTCAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp AGACCCCACTCCCCATGCCCAAGTCCTAGGAACCTCCTAAGAAAGAGGGACAATGGATCTTGTAGCCCATaGTCTGTGGACCGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: RPHSPCPSPRNLLRKRDNGSCSP*SVDREA
Trigger: GGCCTCTCGGTCCACAGAGCATGGGCTACAAGATCC...ATTGTCCCTCTTTCTTAGGAGGTTCCTAGGACTTGGGCATGGGGAGTGGGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp AAGAGTCACACAAGACCCCACTCCCCATGCCCAAGTCCTAGGAACCTCCTAAGAGGATCTTGTAGCCCATaGTCTGTGGACCGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: KSHTRPHSPCPSPRNLLRGSCSP*SVDREA
Trigger: GGCCTCTCGGTCCACAGAGCATGGGCTACAAGATCC...TCTTAGGAGGTTCCTAGGACTTGGGCATGGGGAGTGGGGTCTTGTGTGACTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp CTGAACTCTGGCTACAAGGGATCTAGGGATGACTGCTCTATCCAGCCTGGGTGGACCAACTGCAGTTTCTaGTGTGGGGTTTGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: LNSGYKGSRDDCSIQPGWTNCSF*CGVWGH
Trigger: GTGGCCCCAAACCCCACAGCAGAAACTGCAGTTGGT...CCACCCAGGCTGGATAGAGCAGTCATCCCTAGATCCCTTGTAGCCAGAGTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000131112.2
ENSMUST00000174656.2
CDS-3UTR CCA 90 bp ACAAGACCCCACTCCCCATGCCCAAGTCCTAGGAACCTCCTAAGAAAGAGGGACCCCTCCATTCCCACATaGAGGCTGGCATATTGCTGC +
Preference number: 4 (lower is better)
Translates to: TRPHSPCPSPRNLLRKRDPSIPT*RLAYCC
Trigger: GCAGCAATATGCCAGCCTCCATGTGGGAATGGAGGG...GTCCCTCTTTCTTAGGAGGTTCCTAGGACTTGGGCATGGGGAGTGGGGTCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp CCCCACTCCCCATGCCCAAGTCCTAGGAACCTCCTAAGAAAGAGGGACAATGAGCCCTCCATTCCCACATaGAGGCTGGCATATTGCTGC +
Preference number: 4 (lower is better)
Translates to: PHSPCPSPRNLLRKRDNEPSIPT*RLAYCC
Trigger: GCAGCAATATGCCAGCCTCCATGTGGGAATGGAGGG...CTCATTGTCCCTCTTTCTTAGGAGGTTCCTAGGACTTGGGCATGGGGAGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp AGACCCCACTCCCCATGCCCAAGTCCTAGGAACCTCCTAAGAAAGAGGGACAATATTCGGTCCAGCTGCTaGAAGGAATGGGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RPHSPCPSPRNLLRKRDNIRSSC*KEWASR
Trigger: CCTGCTGGCCCATTCCTTCCAGCAGCTGGACCGAAT...ATTGTCCCTCTTTCTTAGGAGGTTCCTAGGACTTGGGCATGGGGAGTGGGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp GCTACAAGGGATCTAGGGATGACTGCTCTATCCAGCCTGGGTGGTGAGAGGTTAATTCGGTCCAGCTGCTaGAAGGAATGGGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: ATRDLGMTALSSLGGERLIRSSC*KEWASR
Trigger: CCTGCTGGCCCATTCCTTCCAGCAGCTGGACCGAAT...TAACCTCTCACCACCCAGGCTGGATAGAGCAGTCATCCCTAGATCCCTTGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
3UTR CAA 72 bp AACTGGGGCCTCAGGACTGCTTGCTGCAGCTCCCTTTaGCAGAAAGGCCCTTCGCTTTACCAGAAGCCTACA +
Preference number: 4 (lower is better)
Translates to: NWGLRTACCSSL*QKGPSLYQKPT
Trigger: TGTAGGCTTCTGGTAAAGCGAAGGGCCTTTCTGCAAAAGGGAGCTGCAGCAAGCAGTCCTGAGGCCCCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
3UTR CAA 72 bp CAAATCACCAATGGGAAACTGGGGCCTCAGGACTGCTaGCTGCAGCTCCCTTTTGCAGAAAGGCCCTTCGCT +
Preference number: 4 (lower is better)
Translates to: QITNGKLGPQDC*LQLPFAERPFA
Trigger: AGCGAAGGGCCTTTCTGCAAAAGGGAGCTGCAGCAAGCAGTCCTGAGGCCCCAGTTTCCCATTGGTGATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
CDS-3UTR TCA 90 bp CAGCGCCTGAACTCTGGCTACAAGGGATCTAGGGATGACTGCTCTATCCAGCCTAACTTCCCACAGTATTaGCACAGCGCTGGGGACAAC +
Preference number: 4 (lower is better)
Translates to: QRLNSGYKGSRDDCSIQPNFPQY*HSAGDN
Trigger: GTTGTCCCCAGCGCTGTGTCAATACTGTGGGAAGTT...AGGCTGGATAGAGCAGTCATCCCTAGATCCCTTGTAGCCAGAGTTCAGGCGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR TCA 90 bp CACACAAGACCCCACTCCCCATGCCCAAGTCCTAGGAACCTCCTAAGAAAGAGGAACTTCCCACAGTATTaGCACAGCGCTGGGGACAAC +
Preference number: 4 (lower is better)
Translates to: HTRPHSPCPSPRNLLRKRNFPQY*HSAGDN
Trigger: GTTGTCCCCAGCGCTGTGTCAATACTGTGGGAAGTT...CCTCTTTCTTAGGAGGTTCCTAGGACTTGGGCATGGGGAGTGGGGTCTTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR TCA 90 bp CCATGCCCAAGTCCTAGGAACCTCCTAAGAAAGAGGGACAATGAGGCAGGGCCTAACTTCCCACAGTATTaGCACAGCGCTGGGGACAAC +
Preference number: 4 (lower is better)
Translates to: PCPSPRNLLRKRDNEAGPNFPQY*HSAGDN
Trigger: GTTGTCCCCAGCGCTGTGTCAATACTGTGGGAAGTT...AGGCCCTGCCTCATTGTCCCTCTTTCTTAGGAGGTTCCTAGGACTTGGGCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR TCA 90 bp CACACAAGACCCCACTCCCCATGCCCAAGTCCTAGGAACCTCCTAAGAAAGAGGCACCTGCTCACTCAGTaGATCAATTCGGTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: HTRPHSPCPSPRNLLRKRHLLTQ*INSVQL
Trigger: CAGCTGGACCGAATTGATTCACTGAGTGAGCAGGTG...CCTCTTTCTTAGGAGGTTCCTAGGACTTGGGCATGGGGAGTGGGGTCTTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000102907.13
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp AGATGTTCCTCCAAGAAGGACACCTGCTCACTCAGTGAATCAATTCGGTCCAGCCCTCCTCTCTCGCCATaGTGTCCACTCCTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: RCSSKKDTCSLSESIRSSPPLSP*CPLLLW
Trigger: CCACAGCAGGAGTGGACAGCATGGCGAGAGAGGAGG...GCTGGACCGAATTGATTCACTGAGTGAGCAGGTGTCCTTCTTGGAGGAACATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
CDS-3UTR GCA 90 bp CACACAAGACCCCACTCCCCATGCCCAAGTCCTAGGAACCTCCTAAGAAAGAGGGGGGCCAGCACCAACTaGAGTTTCTGTTCTAGCACA +
Preference number: 4 (lower is better)
Translates to: HTRPHSPCPSPRNLLRKRGASTN*SFCSST
Trigger: TGTGCTAGAACAGAAACTGCAGTTGGTGCTGGCCCC...CCTCTTTCTTAGGAGGTTCCTAGGACTTGGGCATGGGGAGTGGGGTCTTGTGTG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp CTGAACTCTGGCTACAAGGGATCTAGGGATGACTGCTCTATCCAGCCTGGGTGGGGGGCCAGCACCAACTaGAGTTTCTGTTCTAGCACA +
Preference number: 4 (lower is better)
Translates to: LNSGYKGSRDDCSIQPGWGASTN*SFCSST
Trigger: TGTGCTAGAACAGAAACTGCAGTTGGTGCTGGCCCC...CCACCCAGGCTGGATAGAGCAGTCATCCCTAGATCCCTTGTAGCCAGAGTTCAG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp ATGACAAAGATGGAGACAATCCCCACCTTACCACTTAGACAGGGAGCCCCACTGGGATCTTGTAGCCCATaGTCTGTGGACCGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: MTKMETIPTLPLRQGAPLGSCSP*SVDREA
Trigger: GGCCTCTCGGTCCACAGAGCATGGGCTACAAGATCC...CAGTGGGGCTCCCTGTCTAAGTGGTAAGGTGGGGATTGTCTCCATCTTTGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp GAGACAATCCCCACCTTACCACTTAGACAGGGAGCCCCACTGAAGAGTCACACAACCAACTGCAGTTTCTaGTGTGGGGTTTGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: ETIPTLPLRQGAPLKSHTTNCSF*CGVWGH
Trigger: GTGGCCCCAAACCCCACAGCAGAAACTGCAGTTGGT...TGTGTGACTCTTCAGTGGGGCTCCCTGTCTAAGTGGTAAGGTGGGGATTGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000131112.2
ENSMUST00000174656.2
CDS-3UTR CCA 90 bp CTGGCTACAAGGGATCTAGGGATGACTGCTCTATCCAGCCTGGGTGGTGAGAGGTTCCCACATGGAGGCTaGCATATTGCTGCTCCACAA +
Preference number: 4 (lower is better)
Translates to: LATRDLGMTALSSLGGERFPHGG*HIAAPQ
Trigger: TTGTGGAGCAGCAATATGCCAGCCTCCATGTGGGAA...CCTCTCACCACCCAGGCTGGATAGAGCAGTCATCCCTAGATCCCTTGTAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp GAGACAATCCCCACCTTACCACTTAGACAGGGAGCCCCACTGAAGAGTCACACACCCTCCATTCCCACATaGAGGCTGGCATATTGCTGC +
Preference number: 4 (lower is better)
Translates to: ETIPTLPLRQGAPLKSHTPSIPT*RLAYCC
Trigger: GCAGCAATATGCCAGCCTCCATGTGGGAATGGAGGG...TGTGTGACTCTTCAGTGGGGCTCCCTGTCTAAGTGGTAAGGTGGGGATTGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp CTCAGCTTTATTATGACAAAGATGGAGACAATCCCCACCTTACCACTTAGACAGTCCTGCTGTGGGGTTTaGGGCCACCGGGGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: LSFIMTKMETIPTLPLRQSCCGV*GHRGGP
Trigger: GGGCCCTCCCCGGTGGCCCCAAACCCCACAGCAGGA...CTGTCTAAGTGGTAAGGTGGGGATTGTCTCCATCTTTGTCATAATAAAGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR TCA 90 bp CCCTTTTGCAGAAAGGCCCTTCGCTTTACCAGAAGCCTACAAGGCAGGAGTGTCAACTTCCCACAGTATTaGCACAGCGCTGGGGACAAC +
Preference number: 4 (lower is better)
Translates to: PFCRKALRFTRSLQGRSVNFPQY*HSAGDN
Trigger: GTTGTCCCCAGCGCTGTGTCAATACTGTGGGAAGTT...GACACTCCTGCCTTGTAGGCTTCTGGTAAAGCGAAGGGCCTTTCTGCAAAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
CDS-3UTR TCA 90 bp AGACCCCACTCCCCATGCCCAAGTCCTAGGAACCTCCTAAGAAAGAGGGACAATCACCTGCTCACTCAGTaGATCAATTCGGTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: RPHSPCPSPRNLLRKRDNHLLTQ*INSVQL
Trigger: CAGCTGGACCGAATTGATTCACTGAGTGAGCAGGTG...ATTGTCCCTCTTTCTTAGGAGGTTCCTAGGACTTGGGCATGGGGAGTGGGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000102907.13
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR TCA 90 bp GAGACAATCCCCACCTTACCACTTAGACAGGGAGCCCCACTGAAGAGTCACACACACCTGCTCACTCAGTaGATCAATTCGGTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: ETIPTLPLRQGAPLKSHTHLLTQ*INSVQL
Trigger: CAGCTGGACCGAATTGATTCACTGAGTGAGCAGGTG...TGTGTGACTCTTCAGTGGGGCTCCCTGTCTAAGTGGTAAGGTGGGGATTGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000102907.13
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp ATTATGACAAAGATGGAGACAATCCCCACCTTACCACTTAGACAGGGAGCCCCACCTCCTCTCTCGCCATaGTGTCCACTCCTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: IMTKMETIPTLPLRQGAPPPLSP*CPLLLW
Trigger: CCACAGCAGGAGTGGACAGCATGGCGAGAGAGGAGG...TGGGGCTCCCTGTCTAAGTGGTAAGGTGGGGATTGTCTCCATCTTTGTCATAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp AAGAGTCACACAAGACCCCACTCCCCATGCCCAAGTCCTAGGAACCTCCTAAGAGGGGCCAGCACCAACTaGAGTTTCTGTTCTAGCACA +
Preference number: 4 (lower is better)
Translates to: KSHTRPHSPCPSPRNLLRGASTN*SFCSST
Trigger: TGTGCTAGAACAGAAACTGCAGTTGGTGCTGGCCCC...TCTTAGGAGGTTCCTAGGACTTGGGCATGGGGAGTGGGGTCTTGTGTGACTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp TTTATTATGACAAAGATGGAGACAATCCCCACCTTACCACTTAGACAGGGAGCCCCCCAGGGAGCCCACTaGTCCTCTTCCAACCAGGGC +
Preference number: 4 (lower is better)
Translates to: FIMTKMETIPTLPLRQGAPQGAH*SSSNQG
Trigger: GCCCTGGTTGGAAGAGGACCAGTGGGCTCCCTGGGG...GGCTCCCTGTCTAAGTGGTAAGGTGGGGATTGTCTCCATCTTTGTCATAATAAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp CCATGCCCAAGTCCTAGGAACCTCCTAAGAAAGAGGGACAATGAGGCAGGGCCTTTCCCACATGGAGGCTaGCATATTGCTGCTCCACAA +
Preference number: 4 (lower is better)
Translates to: PCPSPRNLLRKRDNEAGPFPHGG*HIAAPQ
Trigger: TTGTGGAGCAGCAATATGCCAGCCTCCATGTGGGAA...AGGCCCTGCCTCATTGTCCCTCTTTCTTAGGAGGTTCCTAGGACTTGGGCATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp ACAAGACCCCACTCCCCATGCCCAAGTCCTAGGAACCTCCTAAGAAAGAGGGACTTCCCACATGGAGGCTaGCATATTGCTGCTCCACAA +
Preference number: 4 (lower is better)
Translates to: TRPHSPCPSPRNLLRKRDFPHGG*HIAAPQ
Trigger: TTGTGGAGCAGCAATATGCCAGCCTCCATGTGGGAA...GTCCCTCTTTCTTAGGAGGTTCCTAGGACTTGGGCATGGGGAGTGGGGTCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp ATGACAAAGATGGAGACAATCCCCACCTTACCACTTAGACAGGGAGCCCCACTGCCCTCCATTCCCACATaGAGGCTGGCATATTGCTGC +
Preference number: 4 (lower is better)
Translates to: MTKMETIPTLPLRQGAPLPSIPT*RLAYCC
Trigger: GCAGCAATATGCCAGCCTCCATGTGGGAATGGAGGG...CAGTGGGGCTCCCTGTCTAAGTGGTAAGGTGGGGATTGTCTCCATCTTTGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp ATTATGACAAAGATGGAGACAATCCCCACCTTACCACTTAGACAGGGAGCCCCAAGCTGCTGGAAGGAATaGGCCAGCAGGCTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: IMTKMETIPTLPLRQGAPSCWKE*ASRLPG
Trigger: TCCTGGCAGCCTGCTGGCCCATTCCTTCCAGCAGCT...TGGGGCTCCCTGTCTAAGTGGTAAGGTGGGGATTGTCTCCATCTTTGTCATAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp GCTACAAGGGATCTAGGGATGACTGCTCTATCCAGCCTGGGTGGTGAGAGGTTATTCCCACATGGAGGCTaGCATATTGCTGCTCCACAA +
Preference number: 4 (lower is better)
Translates to: ATRDLGMTALSSLGGERLFPHGG*HIAAPQ
Trigger: TTGTGGAGCAGCAATATGCCAGCCTCCATGTGGGAA...TAACCTCTCACCACCCAGGCTGGATAGAGCAGTCATCCCTAGATCCCTTGTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp CGCCTGAACTCTGGCTACAAGGGATCTAGGGATGACTGCTCTATCCAGCCTGGGTCATCAACATCTGTCTaGCAAGTATCTCCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: RLNSGYKGSRDDCSIQPGSSTSV*QVSPCH
Trigger: ATGGCAGGGAGATACTTGCCAGACAGATGTTGATGA...CCCAGGCTGGATAGAGCAGTCATCCCTAGATCCCTTGTAGCCAGAGTTCAGGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp TTTATTATGACAAAGATGGAGACAATCCCCACCTTACCACTTAGACAGGGAGCCTGGCAAGTATCTCCCTaGCATCCCACAGGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: FIMTKMETIPTLPLRQGAWQVSP*HPTGQR
Trigger: CCGCTGCCCTGTGGGATGGCAGGGAGATACTTGCCA...GGCTCCCTGTCTAAGTGGTAAGGTGGGGATTGTCTCCATCTTTGTCATAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp TTTATTATGACAAAGATGGAGACAATCCCCACCTTACCACTTAGACAGGGAGCCGCAGCGCGTCCCATCTaGAGATGGGCTTTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: FIMTKMETIPTLPLRQGAAARPI*RWALSL
Trigger: GAGGGACAAAGCCCATCTGCAGATGGGACGCGCTGC...GGCTCCCTGTCTAAGTGGTAAGGTGGGGATTGTCTCCATCTTTGTCATAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp CTGGCTACAAGGGATCTAGGGATGACTGCTCTATCCAGCCTGGGTGGTGAGAGGTCCAAGAAGGACACCTaGTCACTCAGTGAATCAATT +
Preference number: 4 (lower is better)
Translates to: LATRDLGMTALSSLGGERSKKDT*SLSESI
Trigger: AATTGATTCACTGAGTGAGCAGGTGTCCTTCTTGGA...CCTCTCACCACCCAGGCTGGATAGAGCAGTCATCCCTAGATCCCTTGTAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000102907.13
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp ATGACAAAGATGGAGACAATCCCCACCTTACCACTTAGACAGGGAGCCCCACTGTTCCCACATGGAGGCTaGCATATTGCTGCTCCACAA +
Preference number: 4 (lower is better)
Translates to: MTKMETIPTLPLRQGAPLFPHGG*HIAAPQ
Trigger: TTGTGGAGCAGCAATATGCCAGCCTCCATGTGGGAA...CAGTGGGGCTCCCTGTCTAAGTGGTAAGGTGGGGATTGTCTCCATCTTTGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp ACCTTACCACTTAGACAGGGAGCCCCACTGAAGAGTCACACAAGACCCCACTCCTCATCAACATCTGTCTaGCAAGTATCTCCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: TLPLRQGAPLKSHTRPHSSSTSV*QVSPCH
Trigger: ATGGCAGGGAGATACTTGCCAGACAGATGTTGATGA...GGAGTGGGGTCTTGTGTGACTCTTCAGTGGGGCTCCCTGTCTAAGTGGTAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp CTGAAGAGTCACACAAGACCCCACTCCCCATGCCCAAGTCCTAGGAACCTCCTATCATCAACATCTGTCTaGCAAGTATCTCCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: LKSHTRPHSPCPSPRNLLSSTSV*QVSPCH
Trigger: ATGGCAGGGAGATACTTGCCAGACAGATGTTGATGA...TAGGAGGTTCCTAGGACTTGGGCATGGGGAGTGGGGTCTTGTGTGACTCTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp CACACAAGACCCCACTCCCCATGCCCAAGTCCTAGGAACCTCCTAAGAAAGAGGTCATCAACATCTGTCTaGCAAGTATCTCCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: HTRPHSPCPSPRNLLRKRSSTSV*QVSPCH
Trigger: ATGGCAGGGAGATACTTGCCAGACAGATGTTGATGA...CCTCTTTCTTAGGAGGTTCCTAGGACTTGGGCATGGGGAGTGGGGTCTTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp AAGGACACCTGCTCACTCAGTGAATCAATTCGGTCCAGCTGCTGGAAGGAATGGTTCCCACATGGAGGCTaGCATATTGCTGTGGGTAGA +
Preference number: 4 (lower is better)
Translates to: KDTCSLSESIRSSCWKEWFPHGG*HIAVGR
Trigger: TCTACCCACAGCAATATGCCAGCCTCCATGTGGGAA...CCATTCCTTCCAGCAGCTGGACCGAATTGATTCACTGAGTGAGCAGGTGTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
CDS-3UTR TCA 90 bp ATTATGACAAAGATGGAGACAATCCCCACCTTACCACTTAGACAGGGAGCCCCAAACTTCCCACAGTATTaGCACAGCGCTGGGGACAAC +
Preference number: 4 (lower is better)
Translates to: IMTKMETIPTLPLRQGAPNFPQY*HSAGDN
Trigger: GTTGTCCCCAGCGCTGTGTCAATACTGTGGGAAGTT...TGGGGCTCCCTGTCTAAGTGGTAAGGTGGGGATTGTCTCCATCTTTGTCATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp CCCCACTCCCCATGCCCAAGTCCTAGGAACCTCCTAAGAAAGAGGGACAATGAGTCCAAGAAGGACACCTaGTCACTCAGTGAATCAATT +
Preference number: 4 (lower is better)
Translates to: PHSPCPSPRNLLRKRDNESKKDT*SLSESI
Trigger: AATTGATTCACTGAGTGAGCAGGTGTCCTTCTTGGA...CTCATTGTCCCTCTTTCTTAGGAGGTTCCTAGGACTTGGGCATGGGGAGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000102907.13
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp ATGGAGACAATCCCCACCTTACCACTTAGACAGGGAGCCCCACTGAAGAGTCACTCATCAACATCTGTCTaGCAAGTATCTCCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: METIPTLPLRQGAPLKSHSSTSV*QVSPCH
Trigger: ATGGCAGGGAGATACTTGCCAGACAGATGTTGATGA...GTGACTCTTCAGTGGGGCTCCCTGTCTAAGTGGTAAGGTGGGGATTGTCTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp AGACCCCACTCCCCATGCCCAAGTCCTAGGAACCTCCTAAGAAAGAGGGACAATTCATCAACATCTGTCTaGCAAGTATCTCCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: RPHSPCPSPRNLLRKRDNSSTSV*QVSPCH
Trigger: ATGGCAGGGAGATACTTGCCAGACAGATGTTGATGA...ATTGTCCCTCTTTCTTAGGAGGTTCCTAGGACTTGGGCATGGGGAGTGGGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp CTCAGCTTTATTATGACAAAGATGGAGACAATCCCCACCTTACCACTTAGACAGAGCTGCTGGAAGGAATaGGCCAGCAGGCTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LSFIMTKMETIPTLPLRQSCWKE*ASRLPG
Trigger: TCCTGGCAGCCTGCTGGCCCATTCCTTCCAGCAGCT...CTGTCTAAGTGGTAAGGTGGGGATTGTCTCCATCTTTGTCATAATAAAGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp AGCTTTATTATGACAAAGATGGAGACAATCCCCACCTTACCACTTAGACAGGGAGGATCTTGTAGCCCATaGTCTGTGGACCGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: SFIMTKMETIPTLPLRQGGSCSP*SVDREA
Trigger: GGCCTCTCGGTCCACAGAGCATGGGCTACAAGATCC...TCCCTGTCTAAGTGGTAAGGTGGGGATTGTCTCCATCTTTGTCATAATAAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp GAGACAATCCCCACCTTACCACTTAGACAGGGAGCCCCACTGAAGAGTCACACATCCAAGAAGGACACCTaGTCACTCAGTGAATCAATT +
Preference number: 4 (lower is better)
Translates to: ETIPTLPLRQGAPLKSHTSKKDT*SLSESI
Trigger: AATTGATTCACTGAGTGAGCAGGTGTCCTTCTTGGA...TGTGTGACTCTTCAGTGGGGCTCCCTGTCTAAGTGGTAAGGTGGGGATTGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000102907.13
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp GCTACAAGGGATCTAGGGATGACTGCTCTATCCAGCCTGGGTGGTGAGAGGTTATCCAAGAAGGACACCTaGTCACTCAGTGAATCAATT +
Preference number: 4 (lower is better)
Translates to: ATRDLGMTALSSLGGERLSKKDT*SLSESI
Trigger: AATTGATTCACTGAGTGAGCAGGTGTCCTTCTTGGA...TAACCTCTCACCACCCAGGCTGGATAGAGCAGTCATCCCTAGATCCCTTGTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000102907.13
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp CTCAGCTTTATTATGACAAAGATGGAGACAATCCCCACCTTACCACTTAGACAGATTCGGTCCAGCTGCTaGAAGGAATGGGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LSFIMTKMETIPTLPLRQIRSSC*KEWASR
Trigger: CCTGCTGGCCCATTCCTTCCAGCAGCTGGACCGAAT...CTGTCTAAGTGGTAAGGTGGGGATTGTCTCCATCTTTGTCATAATAAAGCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000174656.2
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp ACCGCTTTAGCCTCTGGCTATGTAGGGAACCAGCAAATCACCAATGGGAAACTGTCATCAACATCTGTCTaGCAAGTATCTCCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: TALASGYVGNQQITNGKLSSTSV*QVSPCH
Trigger: ATGGCAGGGAGATACTTGCCAGACAGATGTTGATGA...CAGTTTCCCATTGGTGATTTGCTGGTTCCCTACATAGCCAGAGGCTAAAGCGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
CDS-3UTR TCA 90 bp AGCTTTATTATGACAAAGATGGAGACAATCCCCACCTTACCACTTAGACAGGGACACCTGCTCACTCAGTaGATCAATTCGGTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SFIMTKMETIPTLPLRQGHLLTQ*INSVQL
Trigger: CAGCTGGACCGAATTGATTCACTGAGTGAGCAGGTG...TCCCTGTCTAAGTGGTAAGGTGGGGATTGTCTCCATCTTTGTCATAATAAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000102907.13
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp CTCAGCTTTATTATGACAAAGATGGAGACAATCCCCACCTTACCACTTAGACAGGGGGCCAGCACCAACTaGAGTTTCTGTTCTAGCACA +
Preference number: 4 (lower is better)
Translates to: LSFIMTKMETIPTLPLRQGASTN*SFCSST
Trigger: TGTGCTAGAACAGAAACTGCAGTTGGTGCTGGCCCC...CTGTCTAAGTGGTAAGGTGGGGATTGTCTCCATCTTTGTCATAATAAAGCTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp TCAAGTCTCAGCTTTATTATGACAAAGATGGAGACAATCCCCACCTTACCACTTGGGGCCAGCACCAACTaGAGTTTCTGTTCTAGCACA +
Preference number: 4 (lower is better)
Translates to: SSLSFIMTKMETIPTLPLGASTN*SFCSST
Trigger: TGTGCTAGAACAGAAACTGCAGTTGGTGCTGGCCCC...AAGTGGTAAGGTGGGGATTGTCTCCATCTTTGTCATAATAAAGCTGAGACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000102907.13
ENSMUST00000149789.2
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000238951.2
ENSMUST00000238983.2
CDS-3UTR CCA 90 bp AGCTTTATTATGACAAAGATGGAGACAATCCCCACCTTACCACTTAGACAGGGATTCCCACATGGAGGCTaGCATATTGCTGCTCCACAA +
Preference number: 4 (lower is better)
Translates to: SFIMTKMETIPTLPLRQGFPHGG*HIAAPQ
Trigger: TTGTGGAGCAGCAATATGCCAGCCTCCATGTGGGAA...TCCCTGTCTAAGTGGTAAGGTGGGGATTGTCTCCATCTTTGTCATAATAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp AACAGCTCAAGTCTCAGCTTTATTATGACAAAGATGGAGACAATCCCCACCTTACCCTCCATTCCCACATaGAGGCTGGCATATTGCTGT +
Preference number: 4 (lower is better)
Translates to: NSSSLSFIMTKMETIPTLPSIPT*RLAYCC
Trigger: ACAGCAATATGCCAGCCTCCATGTGGGAATGGAGGG...TAAGGTGGGGATTGTCTCCATCTTTGTCATAATAAAGCTGAGACTTGAGCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
CDS-3UTR CCA 90 bp AGTCTCAGCTTTATTATGACAAAGATGGAGACAATCCCCACCTTACCACTTAGATTCCCACATGGAGGCTaGCATATTGCTGCTCCACAA +
Preference number: 4 (lower is better)
Translates to: SLSFIMTKMETIPTLPLRFPHGG*HIAAPQ
Trigger: TTGTGGAGCAGCAATATGCCAGCCTCCATGTGGGAA...TCTAAGTGGTAAGGTGGGGATTGTCTCCATCTTTGTCATAATAAAGCTGAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp AGCTTTATTATGACAAAGATGGAGACAATCCCCACCTTACCACTTAGACAGGGATCCAAGAAGGACACCTaGTCACTCAGTGAATCAATT +
Preference number: 4 (lower is better)
Translates to: SFIMTKMETIPTLPLRQGSKKDT*SLSESI
Trigger: AATTGATTCACTGAGTGAGCAGGTGTCCTTCTTGGA...TCCCTGTCTAAGTGGTAAGGTGGGGATTGTCTCCATCTTTGTCATAATAAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000102907.13
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CCA 90 bp AGTCTCAGCTTTATTATGACAAAGATGGAGACAATCCCCACCTTACCACTTAGATCATCAACATCTGTCTaGCAAGTATCTCCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: SLSFIMTKMETIPTLPLRSSTSV*QVSPCH
Trigger: ATGGCAGGGAGATACTTGCCAGACAGATGTTGATGA...TCTAAGTGGTAAGGTGGGGATTGTCTCCATCTTTGTCATAATAAAGCTGAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR GCA 90 bp AGTCTCAGCTTTATTATGACAAAGATGGAGACAATCCCCACCTTACCACTTAGATCCAAGAAGGACACCTaGTCACTCAGTGAATCAATT +
Preference number: 4 (lower is better)
Translates to: SLSFIMTKMETIPTLPLRSKKDT*SLSESI
Trigger: AATTGATTCACTGAGTGAGCAGGTGTCCTTCTTGGA...TCTAAGTGGTAAGGTGGGGATTGTCTCCATCTTTGTCATAATAAAGCTGAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000102907.13
ENSMUST00000152988.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS GCA 90 bp CAAGAGACTCCCCAGAGCGCCGCAGCAGCCAGGGCAGGGTTGCCCTaGTCCACAAGCCCCAGGGAGCCCACTGGTCCTCTTCCAACCAGG +
Preference number: 5 (lower is better)
Translates to: QETPQSAAAARAGLP*STSPREPTGPLPTR
Trigger: CCTGGTTGGAAGAGGACCAGTGGGCTCCCTGGGGCTTGTGGAGCAGGGCAACCCTGCCCTGGCTGCTGCGGCGCTCTGGGGAGTCTCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
CDS GCA 90 bp GGCCACCGGGGAGGGCCCCTCCTTAGACAGGCAGCGCGTCCCATCTaGAGATGGGCTTTGTCCCTCCCATCCCTGGCACCAGTAACTTCC +
Preference number: 5 (lower is better)
Translates to: GHRGGPLLRQAARPI*RWALSLPSLAPVTS
Trigger: GGAAGTTACTGGTGCCAGGGATGGGAGGGACAAAGCCCATCTGCAGATGGGACGCGCTGCCTGTCTAAGGAGGGGCCCTCCCCGGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000150404.10
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS GCA 90 bp CCCACTGGTCCTCTTCCAACCAGGGCAGCAAGCATAGCGAGGCCTTaGGGGAGTCACCCCAGGGCTACGGCGATAGGCAGTCCGGTAGAT +
Preference number: 5 (lower is better)
Translates to: PTGPLPTRAASIARP*GSHPRATAIGSPVD
Trigger: ATCTACCGGACTGCCTATCGCCGTAGCCCTGGGGTGACTCCCGCAAGGCCTCGCTATGCTTGCTGCCCTGGTTGGAAGAGGACCAGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000145575.10
ENSMUST00000150404.10
ENSMUST00000166920.10
ENSMUST00000173920.9
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS CCA 90 bp CGGGGAGGGCCCCTCCTTAGACAGGCAGCGCGTCCCATCTGCAGATaGGCTTTGTCCCTCCCATCCCTGGCACCAGTAACTTCCCACAGT +
Preference number: 5 (lower is better)
Translates to: RGGPLLRQAARPICR*ALSLPSLAPVTSHS
Trigger: ACTGTGGGAAGTTACTGGTGCCAGGGATGGGAGGGACAAAGCCCATCTGCAGATGGGACGCGCTGCCTGTCTAAGGAGGGGCCCTCCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000150404.10
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS CCA 90 bp CAGTGTCCTGGGCGGATGCAACTCCCTCCATTCCCACATGGAGGCTaGCATATTGCTGCTCCACAAGCCCCAGGGAGCCCACTGGTCCTC +
Preference number: 5 (lower is better)
Translates to: QCPGRMQLPPFPHGG*HIAAPQAPGSPLVL
Trigger: GAGGACCAGTGGGCTCCCTGGGGCTTGTGGAGCAGCAATATGCCAGCCTCCATGTGGGAATGGAGGGAGTTGCATCCGCCCAGGACACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000145575.10
ENSMUST00000150404.10
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS GCA 90 bp TATCTCCCTGCCATCCCACAGGGCAGCGGCAGTGTCCTGGGCGGATaGAACTCCCTCCATTCCCACATGGAGGCTGGCATATTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: YLPAIPQGSGSVLGG*NSLHSHMEAGILLL
Trigger: GAGCAGCAATATGCCAGCCTCCATGTGGGAATGGAGGGAGTTGCATCCGCCCAGGACACTGCCGCTGCCCTGTGGGATGGCAGGGAGATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000145575.10
ENSMUST00000150404.10
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS GCA 90 bp TATCTCCCTGCCATCCCACAGGGCAGCGGCAGTGTCCTGGGCGGATaGAACTCCCTCCATTCCCACATGGAGGCTGGCATATTGCTGTGG +
Preference number: 5 (lower is better)
Translates to: YLPAIPQGSGSVLGG*NSLHSHMEAGILLW
Trigger: CCACAGCAATATGCCAGCCTCCATGTGGGAATGGAGGGAGTTGCATCCGCCCAGGACACTGCCGCTGCCCTGTGGGATGGCAGGGAGATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
CDS CCA 90 bp CTGGCAAGTATCTCCCTGCCATCCCACAGGGCAGCGGCAGTGTCCTaGGCGGATGCAACTCCCTCCATTCCCACATGGAGGCTGGCATAT +
Preference number: 5 (lower is better)
Translates to: LASISLPSHRAAAVS*ADATPSIPTWRLAY
Trigger: ATATGCCAGCCTCCATGTGGGAATGGAGGGAGTTGCATCCGCCCAGGACACTGCCGCTGCCCTGTGGGATGGCAGGGAGATACTTGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000145575.10
ENSMUST00000150404.10
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CAA 90 bp CTGGCTACAAGGGATCTAGGGATGACTGCTCTATCCAGCCTGGGTGGTGAGAGGAAGCATAGCGAGGCCTaGCGGGAGTCACCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: LATRDLGMTALSSLGGERKHSEA*RESPQG
Trigger: GCCCTGGGGTGACTCCCGCAAGGCCTCGCTATGCTT...CCTCTCACCACCCAGGCTGGATAGAGCAGTCATCCCTAGATCCCTTGTAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CAA 90 bp GCTACAAGGGATCTAGGGATGACTGCTCTATCCAGCCTGGGTGGTGAGAGGTTAGCAGCCAGGGCAGGGTaGCCCTGCTCCACAAGCCCC +
Preference number: 5 (lower is better)
Translates to: ATRDLGMTALSSLGGERLAARAG*PCSTSP
Trigger: GGGGCTTGTGGAGCAGGGCAACCCTGCCCTGGCTGC...TAACCTCTCACCACCCAGGCTGGATAGAGCAGTCATCCCTAGATCCCTTGTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
CDS-3UTR CAA 90 bp CTGAACTCTGGCTACAAGGGATCTAGGGATGACTGCTCTATCCAGCCTGGGTGGAAGCATAGCGAGGCCTaGCGGGAGTCACCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: LNSGYKGSRDDCSIQPGWKHSEA*RESPQG
Trigger: GCCCTGGGGTGACTCCCGCAAGGCCTCGCTATGCTT...CCACCCAGGCTGGATAGAGCAGTCATCCCTAGATCCCTTGTAGCCAGAGTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CAA 90 bp CACACAAGACCCCACTCCCCATGCCCAAGTCCTAGGAACCTCCTAAGAAAGAGGAAGCATAGCGAGGCCTaGCGGGAGTCACCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: HTRPHSPCPSPRNLLRKRKHSEA*RESPQG
Trigger: GCCCTGGGGTGACTCCCGCAAGGCCTCGCTATGCTT...CCTCTTTCTTAGGAGGTTCCTAGGACTTGGGCATGGGGAGTGGGGTCTTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CAA 90 bp GGGACAATGAGGCAGGGCCTTCTGCTCATAGGCACCACCAGACAGCGCCTGAACATGGAGGCTGGCATATaGCTGCTCCACAAGCCCCAG +
Preference number: 5 (lower is better)
Translates to: GTMRQGLLLIGTTRQRLNMEAGI*LLHKPQ
Trigger: CTGGGGCTTGTGGAGCAGCAATATGCCAGCCTCCAT...GTTCAGGCGCTGTCTGGTGGTGCCTATGAGCAGAAGGCCCTGCCTCATTGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CAA 90 bp GGGACAATGAGGCAGGGCCTTCTGCTCATAGGCACCACCAGACAGCGCCTGAACATCTGCAGATGGGCTTaGTCCCTCCCATCCCTGGCA +
Preference number: 5 (lower is better)
Translates to: GTMRQGLLLIGTTRQRLNICRWA*SLPSLA
Trigger: TGCCAGGGATGGGAGGGACAAAGCCCATCTGCAGAT...GTTCAGGCGCTGTCTGGTGGTGCCTATGAGCAGAAGGCCCTGCCTCATTGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CAA 90 bp GCTACAAGGGATCTAGGGATGACTGCTCTATCCAGCCTGGGTGGTGAGAGGTTAAAGCATAGCGAGGCCTaGCGGGAGTCACCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: ATRDLGMTALSSLGGERLKHSEA*RESPQG
Trigger: GCCCTGGGGTGACTCCCGCAAGGCCTCGCTATGCTT...TAACCTCTCACCACCCAGGCTGGATAGAGCAGTCATCCCTAGATCCCTTGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CAA 90 bp GAGACAATCCCCACCTTACCACTTAGACAGGGAGCCCCACTGAAGAGTCACACAAAGCATAGCGAGGCCTaGCGGGAGTCACCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: ETIPTLPLRQGAPLKSHTKHSEA*RESPQG
Trigger: GCCCTGGGGTGACTCCCGCAAGGCCTCGCTATGCTT...TGTGTGACTCTTCAGTGGGGCTCCCTGTCTAAGTGGTAAGGTGGGGATTGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CAA 90 bp CCCACCTTACCACTTAGACAGGGAGCCCCACTGAAGAGTCACACAAGACCCCACATCTGCAGATGGGCTTaGTCCCTCCCATCCCTGGCA +
Preference number: 5 (lower is better)
Translates to: PTLPLRQGAPLKSHTRPHICRWA*SLPSLA
Trigger: TGCCAGGGATGGGAGGGACAAAGCCCATCTGCAGAT...GTGGGGTCTTGTGTGACTCTTCAGTGGGGCTCCCTGTCTAAGTGGTAAGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS TCA 90 bp AGATGGTTCGGTAGGTGCTGCAGGCTCTGTGTCCGTCGCAAGTGGTaGGGTAAGGCTGGTATACACGCTGCACAAAGGTCTCCGAGATGG +
Preference number: 5 (lower is better)
Translates to: RWFGRCCRLCVRRKW*GKAGIHAAQRSPRW
Trigger: CCATCTCGGAGACCTTTGTGCAGCGTGTATACCAGCCTTACCTCACCACTTGCGACGGACACAGAGCCTGCAGCACCTACCGAACCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000145575.10
ENSMUST00000150404.10
ENSMUST00000166920.10
ENSMUST00000173920.9
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS GCA 90 bp TCTCCTGTACTGCATTCATCAACATCTGTCTGGCAAGTATCTCCCTaGCATCCCACAGGGCAGCGGCAGTGTCCTGGGCGGATGCAACTC +
Preference number: 5 (lower is better)
Translates to: SPVLHSSTSVWQVSP*HPTGQRQCPGRMQL
Trigger: GAGTTGCATCCGCCCAGGACACTGCCGCTGCCCTGTGGGATGGCAGGGAGATACTTGCCAGACAGATGTTGATGAATGCAGTACAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000145575.10
ENSMUST00000150404.10
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS CCA 90 bp TTGCAGGAGCTCAGTGAATCAATTCGGTCCAGCTGCTGGAAGGAATaGGCCAGCAGGCTGCCAGGATCTTGTAGCCCATGCTCTGTGGAC +
Preference number: 5 (lower is better)
Translates to: LQELSESIRSSCWKE*ASRLPGSCSPCSVD
Trigger: GTCCACAGAGCATGGGCTACAAGATCCTGGCAGCCTGCTGGCCCATTCCTTCCAGCAGCTGGACCGAATTGATTCACTGAGCTCCTGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100290.13
ENSMUST00000149789.2
CDS CCA 90 bp CAGTGTCCTGGGCGGATGCAACTCCCTCCATTCCCACATGGAGGCTaGCATATTGCTGTGGGTAGAAGAGACCTGTCTGAGCATCCAGAC +
Preference number: 5 (lower is better)
Translates to: QCPGRMQLPPFPHGG*HIAVGRRDLSEHPD
Trigger: GTCTGGATGCTCAGACAGGTCTCTTCTACCCACAGCAATATGCCAGCCTCCATGTGGGAATGGAGGGAGTTGCATCCGCCCAGGACACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
CDS-3UTR CAA 90 bp CAGCGCCTGAACTCTGGCTACAAGGGATCTAGGGATGACTGCTCTATCCAGCCTATGGAGGCTGGCATATaGCTGCTCCACAAGCCCCAG +
Preference number: 5 (lower is better)
Translates to: QRLNSGYKGSRDDCSIQPMEAGI*LLHKPQ
Trigger: CTGGGGCTTGTGGAGCAGCAATATGCCAGCCTCCAT...AGGCTGGATAGAGCAGTCATCCCTAGATCCCTTGTAGCCAGAGTTCAGGCGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CAA 90 bp CCATGCCCAAGTCCTAGGAACCTCCTAAGAAAGAGGGACAATGAGGCAGGGCCTATGGAGGCTGGCATATaGCTGCTCCACAAGCCCCAG +
Preference number: 5 (lower is better)
Translates to: PCPSPRNLLRKRDNEAGPMEAGI*LLHKPQ
Trigger: CTGGGGCTTGTGGAGCAGCAATATGCCAGCCTCCAT...AGGCCCTGCCTCATTGTCCCTCTTTCTTAGGAGGTTCCTAGGACTTGGGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CAA 90 bp ATCCCCACCTTACCACTTAGACAGGGAGCCCCACTGAAGAGTCACACAAGACCCATCTGCAGATGGGCTTaGTCCCTCCCATCCCTGGCA +
Preference number: 5 (lower is better)
Translates to: IPTLPLRQGAPLKSHTRPICRWA*SLPSLA
Trigger: TGCCAGGGATGGGAGGGACAAAGCCCATCTGCAGAT...GGGTCTTGTGTGACTCTTCAGTGGGGCTCCCTGTCTAAGTGGTAAGGTGGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CAA 90 bp CCCCACTCCCCATGCCCAAGTCCTAGGAACCTCCTAAGAAAGAGGGACAATGAGATCTGCAGATGGGCTTaGTCCCTCCCATCCCTGGCA +
Preference number: 5 (lower is better)
Translates to: PHSPCPSPRNLLRKRDNEICRWA*SLPSLA
Trigger: TGCCAGGGATGGGAGGGACAAAGCCCATCTGCAGAT...CTCATTGTCCCTCTTTCTTAGGAGGTTCCTAGGACTTGGGCATGGGGAGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS TCA 90 bp GGCTTTGTCCCTCCCATCCCTGGCACCAGTAACTTCCCACAGTATTaGCACAGCGCTGGGGACAACTGGCCTCTCCTGTACTGCATTCAT +
Preference number: 5 (lower is better)
Translates to: GFVPPIPGTSNFPQY*HSAGDNWPLLYCIH
Trigger: ATGAATGCAGTACAGGAGAGGCCAGTTGTCCCCAGCGCTGTGTCAATACTGTGGGAAGTTACTGGTGCCAGGGATGGGAGGGACAAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000150404.10
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CAA 90 bp ATGGAGACAATCCCCACCTTACCACTTAGACAGGGAGCCCCACTGAAGAGTCACATCTGCAGATGGGCTTaGTCCCTCCCATCCCTGGCA +
Preference number: 5 (lower is better)
Translates to: METIPTLPLRQGAPLKSHICRWA*SLPSLA
Trigger: TGCCAGGGATGGGAGGGACAAAGCCCATCTGCAGAT...GTGACTCTTCAGTGGGGCTCCCTGTCTAAGTGGTAAGGTGGGGATTGTCTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CAA 90 bp AAGAGTCACACAAGACCCCACTCCCCATGCCCAAGTCCTAGGAACCTCCTAAGAATCTGCAGATGGGCTTaGTCCCTCCCATCCCTGGCA +
Preference number: 5 (lower is better)
Translates to: KSHTRPHSPCPSPRNLLRICRWA*SLPSLA
Trigger: TGCCAGGGATGGGAGGGACAAAGCCCATCTGCAGAT...TCTTAGGAGGTTCCTAGGACTTGGGCATGGGGAGTGGGGTCTTGTGTGACTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS CCA 90 bp GGATGCAACTCCCTCCATTCCCACATGGAGGCTGGCATATTGCTGTaGGTAGAAGAGACCTGTCTGAGCATCCAGACTCAAGAGACTCCC +
Preference number: 5 (lower is better)
Translates to: GCNSLHSHMEAGILL*VEETCLSIQTQETP
Trigger: GGGAGTCTCTTGAGTCTGGATGCTCAGACAGGTCTCTTCTACCCACAGCAATATGCCAGCCTCCATGTGGGAATGGAGGGAGTTGCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
CDS-3UTR CAA 90 bp ACACCTGCTCACTCAGTGAATCAATTCGGTCCAGCTGCTGGAAGGAATGGGCCAATGGAGGCTGGCATATaGCTGTGGGTAGAAGAGACC +
Preference number: 5 (lower is better)
Translates to: TPAHSVNQFGPAAGRNGPMEAGI*LWVEET
Trigger: GGTCTCTTCTACCCACAGCAATATGCCAGCCTCCAT...TGGCCCATTCCTTCCAGCAGCTGGACCGAATTGATTCACTGAGTGAGCAGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
CDS-3UTR CAA 90 bp TTTATTATGACAAAGATGGAGACAATCCCCACCTTACCACTTAGACAGGGAGCCATCTGCAGATGGGCTTaGTCCCTCCCATCCCTGGCA +
Preference number: 5 (lower is better)
Translates to: FIMTKMETIPTLPLRQGAICRWA*SLPSLA
Trigger: TGCCAGGGATGGGAGGGACAAAGCCCATCTGCAGAT...GGCTCCCTGTCTAAGTGGTAAGGTGGGGATTGTCTCCATCTTTGTCATAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000139801.9
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CAA 90 bp AGCTTTATTATGACAAAGATGGAGACAATCCCCACCTTACCACTTAGACAGGGAATGGAGGCTGGCATATaGCTGCTCCACAAGCCCCAG +
Preference number: 5 (lower is better)
Translates to: SFIMTKMETIPTLPLRQGMEAGI*LLHKPQ
Trigger: CTGGGGCTTGTGGAGCAGCAATATGCCAGCCTCCAT...TCCCTGTCTAAGTGGTAAGGTGGGGATTGTCTCCATCTTTGTCATAATAAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS-3UTR CAA 90 bp AGTCTCAGCTTTATTATGACAAAGATGGAGACAATCCCCACCTTACCACTTAGAATGGAGGCTGGCATATaGCTGCTCCACAAGCCCCAG +
Preference number: 5 (lower is better)
Translates to: SLSFIMTKMETIPTLPLRMEAGI*LLHKPQ
Trigger: CTGGGGCTTGTGGAGCAGCAATATGCCAGCCTCCAT...TCTAAGTGGTAAGGTGGGGATTGTCTCCATCTTTGTCATAATAAAGCTGAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS GCA 72 bp CCCCAGAGCGCCGCAGCAGCCAGGGCAGGGTTGCCCTaGTCCACAAGCCCCAGGGAGCCCACTGGTCCTCTT +
Preference number: 6 (lower is better)
Translates to: PQSAAAARAGLP*STSPREPTGPL
Trigger: AAGAGGACCAGTGGGCTCCCTGGGGCTTGTGGAGCAGGGCAACCCTGCCCTGGCTGCTGCGGCGCTCTGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
CDS GCA 72 bp CCCGAGCCTGCAGCCTGTACACCTCCTCTCTCGCCATaGTGTCCACTCCTGCTGTGGGGTTTGGGGCCACCG +
Preference number: 6 (lower is better)
Translates to: PEPAACTPPLSP*CPLLLWGLGPP
Trigger: CGGTGGCCCCAAACCCCACAGCAGGAGTGGACAGCATGGCGAGAGAGGAGGTGTACAGGCTGCAGGCTCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000150404.10
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS GCA 72 bp GGAGGGCCCCTCCTTAGACAGGCAGCGCGTCCCATCTaGAGATGGGCTTTGTCCCTCCCATCCCTGGCACCA +
Preference number: 6 (lower is better)
Translates to: GGPLLRQAARPI*RWALSLPSLAP
Trigger: TGGTGCCAGGGATGGGAGGGACAAAGCCCATCTGCAGATGGGACGCGCTGCCTGTCTAAGGAGGGGCCCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000131112.2
ENSMUST00000139801.9
ENSMUST00000150404.10
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS CAA 90 bp GCCCACTGGTCCTCTTCCAACCAGGGCAGCAAGCATAGCGAGGCCTaGCGGGAGTCACCCCAGGGCTACGGCGATAGGCAGTCCGGTAGA +
Preference number: 6 (lower is better)
Translates to: AHWSSSNQGSKHSEA*RESPQGYGDRQSGR
Trigger: TCTACCGGACTGCCTATCGCCGTAGCCCTGGGGTGACTCCCGCAAGGCCTCGCTATGCTTGCTGCCCTGGTTGGAAGAGGACCAGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000145575.10
ENSMUST00000150404.10
ENSMUST00000166920.10
ENSMUST00000173920.9
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS GCA 72 bp CCTCTTCCAACCAGGGCAGCAAGCATAGCGAGGCCTTaGGGGAGTCACCCCAGGGCTACGGCGATAGGCAGT +
Preference number: 6 (lower is better)
Translates to: PLPTRAASIARP*GSHPRATAIGS
Trigger: ACTGCCTATCGCCGTAGCCCTGGGGTGACTCCCGCAAGGCCTCGCTATGCTTGCTGCCCTGGTTGGAAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000145575.10
ENSMUST00000150404.10
ENSMUST00000166920.10
ENSMUST00000173920.9
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS GCA 72 bp GCCATCCCACAGGGCAGCGGCAGTGTCCTGGGCGGATaGAACTCCCTCCATTCCCACATGGAGGCTGGCATA +
Preference number: 6 (lower is better)
Translates to: AIPQGSGSVLGG*NSLHSHMEAGI
Trigger: TATGCCAGCCTCCATGTGGGAATGGAGGGAGTTGCATCCGCCCAGGACACTGCCGCTGCCCTGTGGGATGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000145575.10
ENSMUST00000150404.10
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS CCA 72 bp TCACCCCAGGGCTACGGCGATAGGCAGTCCGGTAGATaGTTCGGTAGGTGCTGCAGGCTCTGTGTCCGTCGC +
Preference number: 6 (lower is better)
Translates to: SPQGYGDRQSGR*FGRCCRLCVRR
Trigger: GCGACGGACACAGAGCCTGCAGCACCTACCGAACCATCTACCGGACTGCCTATCGCCGTAGCCCTGGGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000145575.10
ENSMUST00000150404.10
ENSMUST00000166920.10
ENSMUST00000173920.9
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS CCA 72 bp ATCTCCCTGCCATCCCACAGGGCAGCGGCAGTGTCCTaGGCGGATGCAACTCCCTCCATTCCCACATGGAGG +
Preference number: 6 (lower is better)
Translates to: ISLPSHRAAAVS*ADATPSIPTWR
Trigger: CCTCCATGTGGGAATGGAGGGAGTTGCATCCGCCCAGGACACTGCCGCTGCCCTGTGGGATGGCAGGGAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000145575.10
ENSMUST00000150404.10
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS CAA 72 bp TCCTCTTCCAACCAGGGCAGCAAGCATAGCGAGGCCTaGCGGGAGTCACCCCAGGGCTACGGCGATAGGCAG +
Preference number: 6 (lower is better)
Translates to: SSSNQGSKHSEA*RESPQGYGDRQ
Trigger: CTGCCTATCGCCGTAGCCCTGGGGTGACTCCCGCAAGGCCTCGCTATGCTTGCTGCCCTGGTTGGAAGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000145575.10
ENSMUST00000150404.10
ENSMUST00000166920.10
ENSMUST00000173920.9
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS GCA 72 bp GCAACTCCCTCCATTCCCACATGGAGGCTGGCATATTaGTGCTCCACAAGCCCCAGGGAGCCCACTGGTCCT +
Preference number: 6 (lower is better)
Translates to: ATPSIPTWRLAY*CSTSPREPTGP
Trigger: AGGACCAGTGGGCTCCCTGGGGCTTGTGGAGCAGCAATATGCCAGCCTCCATGTGGGAATGGAGGGAGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000145575.10
ENSMUST00000150404.10
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS CAA 90 bp GGGCCCCTCCTTAGACAGGCAGCGCGTCCCATCTGCAGATGGGCTTaGTCCCTCCCATCCCTGGCACCAGTAACTTCCCACAGTATTGAC +
Preference number: 6 (lower is better)
Translates to: GPLLRQAARPICRWA*SLPSLAPVTSHSID
Trigger: GTCAATACTGTGGGAAGTTACTGGTGCCAGGGATGGGAGGGACAAAGCCCATCTGCAGATGGGACGCGCTGCCTGTCTAAGGAGGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000150404.10
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS GCA 72 bp CTGCATTCATCAACATCTGTCTGGCAAGTATCTCCCTaGCATCCCACAGGGCAGCGGCAGTGTCCTGGGCGG +
Preference number: 6 (lower is better)
Translates to: LHSSTSVWQVSP*HPTGQRQCPGR
Trigger: CCGCCCAGGACACTGCCGCTGCCCTGTGGGATGGCAGGGAGATACTTGCCAGACAGATGTTGATGAATGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000145575.10
ENSMUST00000150404.10
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS CCA 72 bp GGGCGGATGCAACTCCCTCCATTCCCACATGGAGGCTaGCATATTGCTGTGGGTAGAAGAGACCTGTCTGAG +
Preference number: 6 (lower is better)
Translates to: GRMQLPPFPHGG*HIAVGRRDLSE
Trigger: CTCAGACAGGTCTCTTCTACCCACAGCAATATGCCAGCCTCCATGTGGGAATGGAGGGAGTTGCATCCGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
CDS CAA 90 bp CTGGGCGGATGCAACTCCCTCCATTCCCACATGGAGGCTGGCATATaGCTGTGGGTAGAAGAGACCTGTCTGAGCATCCAGACTCAAGAG +
Preference number: 6 (lower is better)
Translates to: LGGCNSLHSHMEAGI*LWVEETCLSIQTQE
Trigger: CTCTTGAGTCTGGATGCTCAGACAGGTCTCTTCTACCCACAGCAATATGCCAGCCTCCATGTGGGAATGGAGGGAGTTGCATCCGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
CDS GCA 72 bp AACTGCAGTTTCTGTTCTAGCACATCAACCCGAGCCTaGAGCCTGTACACCTCCTCTCTCGCCATGCTGTCC +
Preference number: 6 (lower is better)
Translates to: NCSFCSSTSTRA*SLYTSSLAMLS
Trigger: GGACAGCATGGCGAGAGAGGAGGTGTACAGGCTGCAGGCTCGGGTTGATGTGCTAGAACAGAAACTGCAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000150404.10
ENSMUST00000166920.10
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS CAA 72 bp TGCAACTCCCTCCATTCCCACATGGAGGCTGGCATATaGCTGTGGGTAGAAGAGACCTGTCTGAGCATCCAG +
Preference number: 6 (lower is better)
Translates to: CNSLHSHMEAGI*LWVEETCLSIQ
Trigger: CTGGATGCTCAGACAGGTCTCTTCTACCCACAGCAATATGCCAGCCTCCATGTGGGAATGGAGGGAGTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9
CDS CCA 72 bp AAGGCTGGTATACACGCTGCACAAAGGTCTCCGAGATaGAACCTCCGGAAATCCCCACAGTACACACTCTAC +
Preference number: 6 (lower is better)
Translates to: KAGIHAAQRSPR*NLRKSPQYTLY
Trigger: GTAGAGTGTGTACTGTGGGGATTTCCGGAGGTTCCATCTCGGAGACCTTTGTGCAGCGTGTATACCAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000100290.13
ENSMUST00000102907.13
ENSMUST00000139801.9
ENSMUST00000145575.10
ENSMUST00000150404.10
ENSMUST00000166920.10
ENSMUST00000173920.9
ENSMUST00000174211.8
ENSMUST00000238951.2
ENSMUST00000238983.2
ENSMUST00000239075.2
CDS CCA 72 bp TCCCTCCATTCCCACATGGAGGCTGGCATATTGCTGTaGGTAGAAGAGACCTGTCTGAGCATCCAGACTCAA +
Preference number: 6 (lower is better)
Translates to: SLHSHMEAGILL*VEETCLSIQTQ
Trigger: TTGAGTCTGGATGCTCAGACAGGTCTCTTCTACCCACAGCAATATGCCAGCCTCCATGTGGGAATGGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000139801.9