RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EGF (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028017

Ensembl transcript IDs: ENSMUST00000029653.7, ENSMUST00000197079.5, ENSMUST00000197713.2, ENSMUST00000199615.5

Found 415 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAGAAGCAAAAGTCGCAGCTATCCCGCTGTGCAGCTCTGCAGCTGTaGAGCTATCTTCAGGACCCTGAGCGAGCAGTGATTAGCCGTGGA +
Preference number: 1 (lower is better)
Translates to: KKQKSQLSRCAALQL*SYLQDPERAVISRG
Trigger: TCCACGGCTAATCACTGCTCGCTCAGGGTCCTGAAGATAGCTGCACAGCTGCAGAGCTGCACAGCGGGATAGCTGCGACTTTTGCTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
3UTR TCA 90 bp TTCTTCGTCTGCCAATCTCTCTTCACTATGATAGAATCTGCCCTGTaGGCCCGTAGGGGGTCCCTGCTGAGACTGAAAGTGGTCTCTAGC +
Preference number: 1 (lower is better)
Translates to: FFVCQSLFTMIESAL*ARRGSLLRLKVVSS
Trigger: GCTAGAGACCACTTTCAGTCTCAGCAGGGACCCCCTACGGGCTCACAGGGCAGATTCTATCATAGTGAAGAGAGATTGGCAGACGAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR GCA 90 bp TGCTCTTTCAGCGGTCCACAGTTCGATTCCCAGTACCCACACGGCTaGACACAGATATCTGTAACTCCAGTCTCAGGGGATTTGACAGGA +
Preference number: 1 (lower is better)
Translates to: CSFSGPQFDSQYPHG*TQISVTPVSGDLTG
Trigger: TCCTGTCAAATCCCCTGAGACTGGAGTTACAGATATCTGTGTGCAGCCGTGTGGGTACTGGGAATCGAACTGTGGACCGCTGAAAGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR CCA 90 bp GAGGATAAAGTTGGGACCCTCAGCTTTCAGGCAAAGAGCAGCGTGTaGAGGCCTCCCTACAATCGCAGTACTTGGAAAATGGAGATGGGA +
Preference number: 1 (lower is better)
Translates to: EDKVGTLSFQAKSSV*RPPYNRSTWKMEMG
Trigger: TCCCATCTCCATTTTCCAAGTACTGCGATTGTAGGGAGGCCTCCACACGCTGCTCTTTGCCTGAAAGCTGAGGGTCCCAACTTTATCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR GCA 90 bp ATTATGCACGACGGGTGGGGCTTGCGGCCCTTGAGCCCTAAAATCTaGTCTTTAGAGCACAGAAGTCAGAGGAAGACTTCTGTAACTGTT +
Preference number: 1 (lower is better)
Translates to: IMHDGWGLRPLSPKI*SLEHRSQRKTSVTV
Trigger: AACAGTTACAGAAGTCTTCCTCTGACTTCTGTGCTCTAAAGAGCAGATTTTAGGGCTCAAGGGCCGCAAGCCCCACCCGTCGTGCATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR TCA 90 bp CGAATTATCCCTCAAATGGTTCAGCCTAGAGTCTCTCAGCATGTATaGTCCATGCCTGGCCCAACGGAGCTTTACAGCACAGGCTTTTCA +
Preference number: 1 (lower is better)
Translates to: RIIPQMVQPRVSQHV*SMPGPTELYSTGFS
Trigger: TGAAAAGCCTGTGCTGTAAAGCTCCGTTGGGCCAGGCATGGATCATACATGCTGAGAGACTCTAGGCTGAACCATTTGAGGGATAATTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR GCA 90 bp TCCCTCAAATGGTTCAGCCTAGAGTCTCTCAGCATGTATGATCCATaGCTGGCCCAACGGAGCTTTACAGCACAGGCTTTTCAAAAGAGA +
Preference number: 1 (lower is better)
Translates to: SLKWFSLESLSMYDP*LAQRSFTAQAFQKR
Trigger: TCTCTTTTGAAAAGCCTGTGCTGTAAAGCTCCGTTGGGCCAGGCATGGATCATACATGCTGAGAGACTCTAGGCTGAACCATTTGAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR TCA 90 bp GAACAAAAGCTATCTGGGAGAACTCACAGTTCATGCCTGACACCATaGTTTCAGCCACTAGTGTGGAAGATTCTGTCCCATCATCGTCTG +
Preference number: 1 (lower is better)
Translates to: EQKLSGRTHSSCLTP*FQPLVWKILSHHRL
Trigger: CAGACGATGATGGGACAGAATCTTCCACACTAGTGGCTGAAATCATGGTGTCAGGCATGAACTGTGAGTTCTCCCAGATAGCTTTTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR CCA 90 bp GAATTTCCTACTGGTGGAGTGGAAGCTGTTGGAACAAAAGCTATCTaGGAGAACTCACAGTTCATGCCTGACACCATGATTTCAGCCACT +
Preference number: 1 (lower is better)
Translates to: EFPTGGVEAVGTKAI*ENSQFMPDTMISAT
Trigger: AGTGGCTGAAATCATGGTGTCAGGCATGAACTGTGAGTTCTCCCAGATAGCTTTTGTTCCAACAGCTTCCACTCCACCAGTAGGAAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR TCA 90 bp GGATGGGTACATTCAAATTATTTAGTTCCCAGATCACAAGGCTGCTaGGAGTACGACTGGACAGTATTTGAGCGCAGCAAACATTGGACA +
Preference number: 1 (lower is better)
Translates to: GWVHSNYLVPRSQGC*EYDWTVFERSKHWT
Trigger: TGTCCAATGTTTGCTGCGCTCAAATACTGTCCAGTCGTACTCTCAGCAGCCTTGTGATCTGGGAACTAAATAATTTGAATGTACCCATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR CCA 90 bp AGAGCAGCGTGTGGAGGCCTCCCTACAATCGCAGTACTTGGAAAATaGAGATGGGATTCTCTGGAGCAATCTGTAAGGAATATATATATA +
Preference number: 1 (lower is better)
Translates to: RAACGGLPTIAVLGK*RWDSLEQSVRNIYI
Trigger: TATATATATATTCCTTACAGATTGCTCCAGAGAATCCCATCTCCATTTTCCAAGTACTGCGATTGTAGGGAGGCCTCCACACGCTGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR GCA 90 bp CTCTTTAGAGCACAGAAGTCAGAGGAAGACTTCTGTAACTGTTCTTaGATGGAGGTTTCAAACAGCTTAAAGCCACAGACAGTATGCTAC +
Preference number: 1 (lower is better)
Translates to: LFRAQKSEEDFCNCS*MEVSNSLKPQTVCY
Trigger: GTAGCATACTGTCTGTGGCTTTAAGCTGTTTGAAACCTCCATGCAAGAACAGTTACAGAAGTCTTCCTCTGACTTCTGTGCTCTAAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR GCA 90 bp CTGCTTCTCTTTCCCGAGCAGGGATTTCTAAGAGGACCGCTGCTTTaGATGACTGTTCTTGGAAACCAAAGAAAACATGACTGTTTTAAA +
Preference number: 1 (lower is better)
Translates to: LLLFPEQGFLRGPLL*MTVLGNQRKHDCFK
Trigger: TTTAAAACAGTCATGTTTTCTTTGGTTTCCAAGAACAGTCATGCAAAGCAGCGGTCCTCTTAGAAATCCCTGCTCGGGAAAGAGAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR CCA 90 bp ACATTATACCAGGGAAAGAGCATACAGAATTTCCTACTGGTGGAGTaGAAGCTGTTGGAACAAAAGCTATCTGGGAGAACTCACAGTTCA +
Preference number: 1 (lower is better)
Translates to: TLYQGKSIQNFLLVE*KLLEQKLSGRTHSS
Trigger: TGAACTGTGAGTTCTCCCAGATAGCTTTTGTTCCAACAGCTTCCACTCCACCAGTAGGAAATTCTGTATGCTCTTTCCCTGGTATAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR CCA 90 bp AACCAAGATTTCTCTTGGGTGAACACAATACCTTCCATGCTTGCTTaGCTACCCCTTATTACTCACAGCTCAGGATGGGTACATTCAAAT +
Preference number: 1 (lower is better)
Translates to: NQDFSWVNTIPSMLA*LPLITHSSGWVHSN
Trigger: ATTTGAATGTACCCATCCTGAGCTGTGAGTAATAAGGGGTAGCCAAGCAAGCATGGAAGGTATTGTGTTCACCCAAGAGAAATCTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR TCA 90 bp AACCCACTCCTTCTGAGGCAAAAGGAAAAGAGGCAAACCGTCCAGTaGAGAAGACACAGCTTATATATGAATGTCTTGACTTTGGTTTCT +
Preference number: 1 (lower is better)
Translates to: NPLLLRQKEKRQTVQ*RRHSLYMNVLTLVS
Trigger: AGAAACCAAAGTCAAGACATTCATATATAAGCTGTGTCTTCTTCACTGGACGGTTTGCCTCTTTTCCTTTTGCCTCAGAAGGAGTGGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
3UTR CCA 90 bp ATTTATCACAATTCAGAAAGCACAATTATGAGCATGGGCCACACTTaGCAGTATATCATAGCAAAAGTTATAGTGTTCCAAGCGTTCCTG +
Preference number: 1 (lower is better)
Translates to: IYHNSESTIMSMGHT*QYIIAKVIVFQAFL
Trigger: CAGGAACGCTTGGAACACTATAACTTTTGCTATGATATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCTGAATTGTGATAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
3UTR TCA 90 bp AACTTTTCTGTCTATAGAGTTTCTTCAGTAATTAAAGCAACCAATTaGTATGGCTCATCAATTCCTATCAACTTTGCACGACAGCTAGAC +
Preference number: 1 (lower is better)
Translates to: NFSVYRVSSVIKATN*YGSSIPINFARQLD
Trigger: GTCTAGCTGTCGTGCAAAGTTGATAGGAATTGATGAGCCATATCAATTGGTTGCTTTAATTACTGAAGAAACTCTATAGACAGAAAAGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR-3UTR TCA 90 bp GCGAACCTGAGTCAGCACTGCATGATGGGAAGCAGCAGCCATACAGTAGGAGGTGTCTCTCAGCATGTATaGTCCATGCCTGGCCCAACG +
Preference number: 2 (lower is better)
Translates to: ANLSQHCMMGSSSHTVGGVSQHV*SMPGPT
Trigger: CGTTGGGCCAGGCATGGATCATACATGCTGAGAGAC...ACCTCCTACTGTATGGCTGCTGCTTCCCATCATGCAGTGCTGACTCAGGTTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR-3UTR TCA 90 bp TTCCCAGTACCCACACGGCTGCACACAGATATCTGTAACTCCAGTCTCAGGGGACTGAGTGAAGGGCAATaGGCCTTGAGGACAGGGTGG +
Preference number: 2 (lower is better)
Translates to: FPVPTRLHTDICNSSLRGLSEGQ*ALRTGW
Trigger: CCACCCTGTCCTCAAGGCTCATTGCCCTTCACTCAG...TCCCCTGAGACTGGAGTTACAGATATCTGTGTGCAGCCGTGTGGGTACTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR-3UTR TCA 90 bp GATTCCCAGTACCCACACGGCTGCACACAGATATCTGTAACTCCAGTCTCAGGGCTCTCCCTCACTCCTTaGCCCCCTACACCATCAATG +
Preference number: 2 (lower is better)
Translates to: DSQYPHGCTQISVTPVSGLSLTP*PPTPSM
Trigger: CATTGATGGTGTAGGGGGTCAAGGAGTGAGGGAGAG...CCCTGAGACTGGAGTTACAGATATCTGTGTGCAGCCGTGTGGGTACTGGGAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR CAA 90 bp CTTAAAGCCACAGACAGTATGCTACTTAGGGGCCTGAGGATAAAGTaGGGACCCTCAGCTTTCAGGCAAAGAGCAGCGTGTGGAGGCCTC +
Preference number: 2 (lower is better)
Translates to: LKATDSMLLRGLRIK*GPSAFRQRAACGGL
Trigger: GAGGCCTCCACACGCTGCTCTTTGCCTGAAAGCTGAGGGTCCCAACTTTATCCTCAGGCCCCTAAGTAGCATACTGTCTGTGGCTTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR-3UTR TCA 90 bp GCGAACCTGAGTCAGCACTGCATGATGGGAAGCAGCAGCCATACAGTAGGAGGTCTCACAGTTCATGCCTaGCACCATGATTTCAGCCAC +
Preference number: 2 (lower is better)
Translates to: ANLSQHCMMGSSSHTVGGLTVHA*HHDFSH
Trigger: GTGGCTGAAATCATGGTGTCAGGCATGAACTGTGAG...ACCTCCTACTGTATGGCTGCTGCTTCCCATCATGCAGTGCTGACTCAGGTTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR-3UTR GCA 90 bp ACCTGCTTTAACCCACTCCTTCTGAGGCAAAAGGAAAAGAGGCAAACCGTCCAGCCCGCTGTGCAGCTCTaGAGCTGTGCAGCTATCTTC +
Preference number: 2 (lower is better)
Translates to: TCFNPLLLRQKEKRQTVQPAVQL*SCAAIF
Trigger: GAAGATAGCTGCACAGCTGCAGAGCTGCACAGCGGG...CTGGACGGTTTGCCTCTTTTCCTTTTGCCTCAGAAGGAGTGGGTTAAAGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
3UTR-3UTR TCA 90 bp TCCTTGACCCCCTACACCATCAATGTACTCTCTGTCATGTTTCTTCGTCTGCCACACAGTGAGCCACCCTaGGTGAAGGGCAATGAGCCT +
Preference number: 2 (lower is better)
Translates to: SLTPYTINVLSVMFLRLPHSEPP*VKGNEP
Trigger: AGGCTCATTGCCCTTCACTCAGGGTGGCTCACTGTG...TGGCAGACGAAGAAACATGACAGAGAGTACATTGATGGTGTAGGGGGTCAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR-3UTR GCA 90 bp GATTCCCAGTACCCACACGGCTGCACACAGATATCTGTAACTCCAGTCTCAGGGCAGCCTGAGTGGAGTTaGTCAGTGATGTCACCTCTT +
Preference number: 2 (lower is better)
Translates to: DSQYPHGCTQISVTPVSGQPEWS*SVMSPL
Trigger: AAGAGGTGACATCACTGAGCAACTCCACTCAGGCTG...CCCTGAGACTGGAGTTACAGATATCTGTGTGCAGCCGTGTGGGTACTGGGAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR-3UTR CCA 90 bp TTCCCAGTACCCACACGGCTGCACACAGATATCTGTAACTCCAGTCTCAGGGGATGTATGATCCATGCCTaGCCCAACGGAGCTTTACAG +
Preference number: 2 (lower is better)
Translates to: FPVPTRLHTDICNSSLRGCMIHA*PNGALQ
Trigger: CTGTAAAGCTCCGTTGGGCCAGGCATGGATCATACA...TCCCCTGAGACTGGAGTTACAGATATCTGTGTGCAGCCGTGTGGGTACTGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR-3UTR TCA 90 bp AGTCTCAGGGGATTTGACAGGATCAGAAAACCCACGTCACACACAAACACATGTGTGAGCCACCCTGAGTaGAGGGCAATGAGCCTTGAG +
Preference number: 2 (lower is better)
Translates to: SLRGFDRIRKPTSHTNTCVSHPE*RAMSLE
Trigger: CTCAAGGCTCATTGCCCTTCACTCAGGGTGGCTCAC...ACATGTGTTTGTGTGTGACGTGGGTTTTCTGATCCTGTCAAATCCCCTGAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR-3UTR CCA 90 bp AGCTATCCCGCTGTGCAGCTCTGCAGCTGTGCAGCTATCTTCAGGACCCTGAGCCTACCATCATCAGCCTaGTTTGTTATTTTCCCTTCT +
Preference number: 2 (lower is better)
Translates to: SYPAVQLCSCAAIFRTLSLPSSA*FVIFPS
Trigger: AGAAGGGAAAATAACAAACCAGGCTGATGATGGTAG...GCTCAGGGTCCTGAAGATAGCTGCACAGCTGCAGAGCTGCACAGCGGGATAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
3UTR-3UTR CCA 90 bp GCGAACCTGAGTCAGCACTGCATGATGGGAAGCAGCAGCCATACAGTAGGAGGTAGAATTTCCTACTGGTaGAGTGGAAGCTGTTGGAAC +
Preference number: 2 (lower is better)
Translates to: ANLSQHCMMGSSSHTVGGRISYW*SGSCWN
Trigger: GTTCCAACAGCTTCCACTCCACCAGTAGGAAATTCT...ACCTCCTACTGTATGGCTGCTGCTTCCCATCATGCAGTGCTGACTCAGGTTCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR-3UTR CCA 90 bp GCGAACCTGAGTCAGCACTGCATGATGGGAAGCAGCAGCCATACAGTAGGAGGTGCAGTACTTGGAAAATaGAGATGGGATTCTCTGGAG +
Preference number: 2 (lower is better)
Translates to: ANLSQHCMMGSSSHTVGGAVLGK*RWDSLE
Trigger: CTCCAGAGAATCCCATCTCCATTTTCCAAGTACTGC...ACCTCCTACTGTATGGCTGCTGCTTCCCATCATGCAGTGCTGACTCAGGTTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR-3UTR CCA 90 bp TTCCCAGTACCCACACGGCTGCACACAGATATCTGTAACTCCAGTCTCAGGGGATGGAGTGGAAGCTGTTaGAACAAAAGCTATCTGGGA +
Preference number: 2 (lower is better)
Translates to: FPVPTRLHTDICNSSLRGWSGSC*NKSYLG
Trigger: TCCCAGATAGCTTTTGTTCCAACAGCTTCCACTCCA...TCCCCTGAGACTGGAGTTACAGATATCTGTGTGCAGCCGTGTGGGTACTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR CAA 90 bp CCACACGGCTGCACACAGATATCTGTAACTCCAGTCTCAGGGGATTaGACAGGATCAGAAAACCCACGTCACACACAAACACATGTAGAC +
Preference number: 2 (lower is better)
Translates to: PHGCTQISVTPVSGD*TGSENPRHTQTHVD
Trigger: GTCTACATGTGTTTGTGTGTGACGTGGGTTTTCTGATCCTGTCAAATCCCCTGAGACTGGAGTTACAGATATCTGTGTGCAGCCGTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR-3UTR TCA 90 bp TCCTTGACCCCCTACACCATCAATGTACTCTCTGTCATGTTTCTTCGTCTGCCATCATGCCTGACACCATaGTTTCAGCCACTAGTGTGG +
Preference number: 2 (lower is better)
Translates to: SLTPYTINVLSVMFLRLPSCLTP*FQPLVW
Trigger: CCACACTAGTGGCTGAAATCATGGTGTCAGGCATGA...TGGCAGACGAAGAAACATGACAGAGAGTACATTGATGGTGTAGGGGGTCAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR-3UTR GCA 90 bp TCCTTGACCCCCTACACCATCAATGTACTCTCTGTCATGTTTCTTCGTCTGCCAAGCATGTATGATCCATaGCTGGCCCAACGGAGCTTT +
Preference number: 2 (lower is better)
Translates to: SLTPYTINVLSVMFLRLPSMYDP*LAQRSF
Trigger: AAAGCTCCGTTGGGCCAGGCATGGATCATACATGCT...TGGCAGACGAAGAAACATGACAGAGAGTACATTGATGGTGTAGGGGGTCAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR-3UTR GCA 90 bp ATTTATCACAATTCAGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATGCAGCTATCCCGCTGTaGAGCTCTGCAGCTGTGCAG +
Preference number: 2 (lower is better)
Translates to: IYHNSESTIMSMGHTWQYAAIPL*SSAAVQ
Trigger: CTGCACAGCTGCAGAGCTGCACAGCGGGATAGCTGC...ATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCTGAATTGTGATAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
3UTR-3UTR CCA 90 bp TCCTTGACCCCCTACACCATCAATGTACTCTCTGTCATGTTTCTTCGTCTGCCAGTACTTCAGCCTGAGTaGAGTTGCTCAGTGATGTCA +
Preference number: 2 (lower is better)
Translates to: SLTPYTINVLSVMFLRLPVLQPE*SCSVMS
Trigger: TGACATCACTGAGCAACTCCACTCAGGCTGAAGTAC...TGGCAGACGAAGAAACATGACAGAGAGTACATTGATGGTGTAGGGGGTCAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR-3UTR TCA 90 bp ACCTGCTTTAACCCACTCCTTCTGAGGCAAAAGGAAAAGAGGCAAACCGTCCAGTCTCCACTTCTCTTTTaGGTATCTTCAGTGGAACTG +
Preference number: 2 (lower is better)
Translates to: TCFNPLLLRQKEKRQTVQSPLLF*VSSVEL
Trigger: CAGTTCCACTGAAGATACTCAAAAGAGAAGTGGAGA...CTGGACGGTTTGCCTCTTTTCCTTTTGCCTCAGAAGGAGTGGGTTAAAGCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
3UTR-3UTR GCA 90 bp ATTTATCACAATTCAGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATCCCGCTGTGCAGCTCTaGAGCTGTGCAGCTATCTTC +
Preference number: 2 (lower is better)
Translates to: IYHNSESTIMSMGHTWQYPAVQL*SCAAIF
Trigger: GAAGATAGCTGCACAGCTGCAGAGCTGCACAGCGGG...ATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCTGAATTGTGATAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
3UTR-3UTR CCA 90 bp GCGAACCTGAGTCAGCACTGCATGATGGGAAGCAGCAGCCATACAGTAGGAGGTAGCAACCAATTGATATaGCTCATCAATTCCTATCAA +
Preference number: 2 (lower is better)
Translates to: ANLSQHCMMGSSSHTVGGSNQLI*LINSYQ
Trigger: TTGATAGGAATTGATGAGCCATATCAATTGGTTGCT...ACCTCCTACTGTATGGCTGCTGCTTCCCATCATGCAGTGCTGACTCAGGTTCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR-3UTR CCA 90 bp TCCTTGACCCCCTACACCATCAATGTACTCTCTGTCATGTTTCTTCGTCTGCCACTAATTGAAACTGGCTaGCTAGAAGTCCCAGGTATC +
Preference number: 2 (lower is better)
Translates to: SLTPYTINVLSVMFLRLPLIETG*LEVPGI
Trigger: GATACCTGGGACTTCTAGCCAGCCAGTTTCAATTAG...TGGCAGACGAAGAAACATGACAGAGAGTACATTGATGGTGTAGGGGGTCAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR-3UTR TCA 90 bp CAAAGGCTCTGCTGTCTTATATTGTCTTTGGGGCTAAGTGAATACAAAACCAAAGTTTTGGAGTCACAGTaGGCCACCCTGAGTGAAGGG +
Preference number: 2 (lower is better)
Translates to: QRLCCLILSLGLSEYKTKVLESQ*ATLSEG
Trigger: CCCTTCACTCAGGGTGGCTCACTGTGACTCCAAAAC...TTTGGTTTTGTATTCACTTAGCCCCAAAGACAATATAAGACAGCAGAGCCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR-3UTR CCA 90 bp ACCTGCTTTAACCCACTCCTTCTGAGGCAAAAGGAAAAGAGGCAAACCGTCCAGCTACCATCATCAGCCTaGTTTGTTATTTTCCCTTCT +
Preference number: 2 (lower is better)
Translates to: TCFNPLLLRQKEKRQTVQLPSSA*FVIFPS
Trigger: AGAAGGGAAAATAACAAACCAGGCTGATGATGGTAG...CTGGACGGTTTGCCTCTTTTCCTTTTGCCTCAGAAGGAGTGGGTTAAAGCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
3UTR CAA 90 bp CTGAGACTGAAAGTGGTCTCTAGCCCACTAACCCTGATGCCTTATTaGATTAAACTTCTGGTTCTCACATTAAGCTGTGACTATGCAGGC +
Preference number: 2 (lower is better)
Translates to: LRLKVVSSPLTLMPY*IKLLVLTLSCDYAG
Trigger: GCCTGCATAGTCACAGCTTAATGTGAGAACCAGAAGTTTAATCAAATAAGGCATCAGGGTTAGTGGGCTAGAGACCACTTTCAGTCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR-3UTR GCA 90 bp TCCTTGACCCCCTACACCATCAATGTACTCTCTGTCATGTTTCTTCGTCTGCCATTGAGCCCTAAAATCTaGTCTTTAGAGCACAGAAGT +
Preference number: 2 (lower is better)
Translates to: SLTPYTINVLSVMFLRLPLSPKI*SLEHRS
Trigger: ACTTCTGTGCTCTAAAGAGCAGATTTTAGGGCTCAA...TGGCAGACGAAGAAACATGACAGAGAGTACATTGATGGTGTAGGGGGTCAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR-3UTR CCA 90 bp AGTCTCAGGGGATTTGACAGGATCAGAAAACCCACGTCACACACAAACACATGTTTTCAGCCACTAGTGTaGAAGATTCTGTCCCATCAT +
Preference number: 2 (lower is better)
Translates to: SLRGFDRIRKPTSHTNTCFQPLV*KILSHH
Trigger: ATGATGGGACAGAATCTTCCACACTAGTGGCTGAAA...ACATGTGTTTGTGTGTGACGTGGGTTTTCTGATCCTGTCAAATCCCCTGAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR-3UTR TCA 90 bp AACTCACAGTTCATGCCTGACACCATGATTTCAGCCACTAGTGTGGAAGATTCTATCAGCATTTTCACCTaGCAGGATTGGATAATCCTG +
Preference number: 2 (lower is better)
Translates to: NSQFMPDTMISATSVEDSISIFT*QDWIIL
Trigger: CAGGATTATCCAATCCTGTCAGGTGAAAATGCTGAT...AGAATCTTCCACACTAGTGGCTGAAATCATGGTGTCAGGCATGAACTGTGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR-3UTR GCA 90 bp AGTCTCAGGGGATTTGACAGGATCAGAAAACCCACGTCACACACAAACACATGTTTCTGTAACTGTTCTTaGATGGAGGTTTCAAACAGC +
Preference number: 2 (lower is better)
Translates to: SLRGFDRIRKPTSHTNTCFCNCS*MEVSNS
Trigger: GCTGTTTGAAACCTCCATGCAAGAACAGTTACAGAA...ACATGTGTTTGTGTGTGACGTGGGTTTTCTGATCCTGTCAAATCCCCTGAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR-3UTR CCA 90 bp TCCTTGACCCCCTACACCATCAATGTACTCTCTGTCATGTTTCTTCGTCTGCCAGTATTTAGCATGTCCTaGTATCCCCAGTACTTAATA +
Preference number: 2 (lower is better)
Translates to: SLTPYTINVLSVMFLRLPVFSMS*YPQYLI
Trigger: TATTAAGTACTGGGGATACCAGGACATGCTAAATAC...TGGCAGACGAAGAAACATGACAGAGAGTACATTGATGGTGTAGGGGGTCAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR-3UTR TCA 90 bp ATTTATCACAATTCAGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATTTAACCCACTCCTTCTaGGGCAAAAGGAAAAGAGGC +
Preference number: 2 (lower is better)
Translates to: IYHNSESTIMSMGHTWQYLTHSF*GKRKRG
Trigger: GCCTCTTTTCCTTTTGCCTCAGAAGGAGTGGGTTAA...ATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCTGAATTGTGATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
3UTR-3UTR TCA 90 bp ATTTATCACAATTCAGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATAGGCAAACCGTCCAGTaGAGAAGACACAGCTTATAT +
Preference number: 2 (lower is better)
Translates to: IYHNSESTIMSMGHTWQYRQTVQ*RRHSLY
Trigger: ATATAAGCTGTGTCTTCTTCACTGGACGGTTTGCCT...ATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCTGAATTGTGATAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
3UTR-3UTR CCA 90 bp TCTTTTGAGTATCTTCAGTGGAACTGCTTAAAGCAAGAAGCAAAAGTCGCAGCTCTACCATCATCAGCCTaGTTTGTTATTTTCCCTTCT +
Preference number: 2 (lower is better)
Translates to: SFEYLQWNCLKQEAKVAALPSSA*FVIFPS
Trigger: AGAAGGGAAAATAACAAACCAGGCTGATGATGGTAG...AGCTGCGACTTTTGCTTCTTGCTTTAAGCAGTTCCACTGAAGATACTCAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
3UTR-3UTR CCA 90 bp CAAAGGCTCTGCTGTCTTATATTGTCTTTGGGGCTAAGTGAATACAAAACCAAATACAATCGCAGTACTTaGAAAATGGAGATGGGATTC +
Preference number: 2 (lower is better)
Translates to: QRLCCLILSLGLSEYKTKYNRST*KMEMGF
Trigger: GAATCCCATCTCCATTTTCCAAGTACTGCGATTGTA...TTTGGTTTTGTATTCACTTAGCCCCAAAGACAATATAAGACAGCAGAGCCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR CAA 90 bp AATTTATCACAATTCAGAAAGCACAATTATGAGCATGGGCCACACTaGGCAGTATATCATAGCAAAAGTTATAGTGTTCCAAGCGTTCCT +
Preference number: 2 (lower is better)
Translates to: NLSQFRKHNYEHGPH*AVYHSKSYSVPSVP
Trigger: AGGAACGCTTGGAACACTATAACTTTTGCTATGATATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCTGAATTGTGATAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
3UTR-3UTR GCA 90 bp ATTTATCACAATTCAGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATTATCTTCAGTGGAACTaGTTAAAGCAAGAAGCAAAA +
Preference number: 2 (lower is better)
Translates to: IYHNSESTIMSMGHTWQYYLQWN*LKQEAK
Trigger: TTTTGCTTCTTGCTTTAAGCAGTTCCACTGAAGATA...ATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCTGAATTGTGATAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
3UTR TCA 72 bp GGGAAGCAGCAGCCATACAGTAGGAGGTGCAGGCTGTaGCCGCACTGGCAACACTCGCCTGCTTCTCTTTCC +
Preference number: 3 (lower is better)
Translates to: GKQQPYSRRCRL*PHWQHSPASLS
Trigger: GGAAAGAGAAGCAGGCGAGTGTTGCCAGTGCGGTCACAGCCTGCACCTCCTACTGTATGGCTGCTGCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR GCA 72 bp AAGTCGCAGCTATCCCGCTGTGCAGCTCTGCAGCTGTaGAGCTATCTTCAGGACCCTGAGCGAGCAGTGATT +
Preference number: 3 (lower is better)
Translates to: KSQLSRCAALQL*SYLQDPERAVI
Trigger: AATCACTGCTCGCTCAGGGTCCTGAAGATAGCTGCACAGCTGCAGAGCTGCACAGCGGGATAGCTGCGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
3UTR CCA 72 bp AAGAAGGGCATAGTCAGGGCTGTAGACTTGGCTCGGTaGCTAAGAGCACCTGCTCTTTCAGCGGTCCACAGT +
Preference number: 3 (lower is better)
Translates to: KKGIVRAVDLAR*LRAPALSAVHS
Trigger: ACTGTGGACCGCTGAAAGAGCAGGTGCTCTTAGCCACCGAGCCAAGTCTACAGCCCTGACTATGCCCTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR-3UTR CAA 90 bp GCGAACCTGAGTCAGCACTGCATGATGGGAAGCAGCAGCCATACAGTAGGAGGTTCTCTCCCTCACTCCTaGACCCCCTACACCATCAAT +
Preference number: 3 (lower is better)
Translates to: ANLSQHCMMGSSSHTVGGSLPHS*TPYTIN
Trigger: ATTGATGGTGTAGGGGGTCAAGGAGTGAGGGAGAGA...ACCTCCTACTGTATGGCTGCTGCTTCCCATCATGCAGTGCTGACTCAGGTTCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR GCA 72 bp GACGGGTGGGGCTTGCGGCCCTTGAGCCCTAAAATCTaGTCTTTAGAGCACAGAAGTCAGAGGAAGACTTCT +
Preference number: 3 (lower is better)
Translates to: DGWGLRPLSPKI*SLEHRSQRKTS
Trigger: AGAAGTCTTCCTCTGACTTCTGTGCTCTAAAGAGCAGATTTTAGGGCTCAAGGGCCGCAAGCCCCACCCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR GCA 72 bp AGCGGTCCACAGTTCGATTCCCAGTACCCACACGGCTaGACACAGATATCTGTAACTCCAGTCTCAGGGGAT +
Preference number: 3 (lower is better)
Translates to: SGPQFDSQYPHG*TQISVTPVSGD
Trigger: ATCCCCTGAGACTGGAGTTACAGATATCTGTGTGCAGCCGTGTGGGTACTGGGAATCGAACTGTGGACCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR CCA 72 bp GTTGGGACCCTCAGCTTTCAGGCAAAGAGCAGCGTGTaGAGGCCTCCCTACAATCGCAGTACTTGGAAAATG +
Preference number: 3 (lower is better)
Translates to: VGTLSFQAKSSV*RPPYNRSTWKM
Trigger: CATTTTCCAAGTACTGCGATTGTAGGGAGGCCTCCACACGCTGCTCTTTGCCTGAAAGCTGAGGGTCCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR-3UTR CAA 90 bp GCGAACCTGAGTCAGCACTGCATGATGGGAAGCAGCAGCCATACAGTAGGAGGTCCAGTCTCAGGGGATTaGACAGGATCAGAAAACCCA +
Preference number: 3 (lower is better)
Translates to: ANLSQHCMMGSSSHTVGGPVSGD*TGSENP
Trigger: TGGGTTTTCTGATCCTGTCAAATCCCCTGAGACTGG...ACCTCCTACTGTATGGCTGCTGCTTCCCATCATGCAGTGCTGACTCAGGTTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR TCA 72 bp TGCCAATCTCTCTTCACTATGATAGAATCTGCCCTGTaGGCCCGTAGGGGGTCCCTGCTGAGACTGAAAGTG +
Preference number: 3 (lower is better)
Translates to: CQSLFTMIESAL*ARRGSLLRLKV
Trigger: CACTTTCAGTCTCAGCAGGGACCCCCTACGGGCTCACAGGGCAGATTCTATCATAGTGAAGAGAGATTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR GCA 72 bp TTAAAGCAAGAAGCAAAAGTCGCAGCTATCCCGCTGTaGAGCTCTGCAGCTGTGCAGCTATCTTCAGGACCC +
Preference number: 3 (lower is better)
Translates to: LKQEAKVAAIPL*SSAAVQLSSGP
Trigger: GGGTCCTGAAGATAGCTGCACAGCTGCAGAGCTGCACAGCGGGATAGCTGCGACTTTTGCTTCTTGCTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
3UTR-3UTR CAA 90 bp GATTCCCAGTACCCACACGGCTGCACACAGATATCTGTAACTCCAGTCTCAGGGGGCATAGTTCTTTGCTaGTGTGTGTGTGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: DSQYPHGCTQISVTPVSGGIVLC*CVCVCV
Trigger: CACACACACACACACACACAAGCAAAGAACTATGCC...CCCTGAGACTGGAGTTACAGATATCTGTGTGCAGCCGTGTGGGTACTGGGAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR TCA 72 bp CCTCAAATGGTTCAGCCTAGAGTCTCTCAGCATGTATaGTCCATGCCTGGCCCAACGGAGCTTTACAGCACA +
Preference number: 3 (lower is better)
Translates to: PQMVQPRVSQHV*SMPGPTELYST
Trigger: TGTGCTGTAAAGCTCCGTTGGGCCAGGCATGGATCATACATGCTGAGAGACTCTAGGCTGAACCATTTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR GCA 72 bp TGGTTCAGCCTAGAGTCTCTCAGCATGTATGATCCATaGCTGGCCCAACGGAGCTTTACAGCACAGGCTTTT +
Preference number: 3 (lower is better)
Translates to: WFSLESLSMYDP*LAQRSFTAQAF
Trigger: AAAAGCCTGTGCTGTAAAGCTCCGTTGGGCCAGGCATGGATCATACATGCTGAGAGACTCTAGGCTGAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR-3UTR CAA 90 bp GCGAACCTGAGTCAGCACTGCATGATGGGAAGCAGCAGCCATACAGTAGGAGGTCTACAATCGCAGTACTaGGAAAATGGAGATGGGATT +
Preference number: 3 (lower is better)
Translates to: ANLSQHCMMGSSSHTVGGLQSQY*ENGDGI
Trigger: AATCCCATCTCCATTTTCCAAGTACTGCGATTGTAG...ACCTCCTACTGTATGGCTGCTGCTTCCCATCATGCAGTGCTGACTCAGGTTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR TCA 72 bp ACTAAATGTTTTGGAGTCACAGTGAGCCACCCTGAGTaGAGGGCAATGAGCCTTGAGGACAGGGTGGATTTG +
Preference number: 3 (lower is better)
Translates to: TKCFGVTVSHPE*RAMSLEDRVDL
Trigger: CAAATCCACCCTGTCCTCAAGGCTCATTGCCCTTCACTCAGGGTGGCTCACTGTGACTCCAAAACATTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR TCA 72 bp GCAGACGATGATGTAAGTCATCTCTCCCTCACTCCTTaGCCCCCTACACCATCAATGTACTCTCTGTCATGT +
Preference number: 3 (lower is better)
Translates to: ADDDVSHLSLTP*PPTPSMYSLSC
Trigger: ACATGACAGAGAGTACATTGATGGTGTAGGGGGTCAAGGAGTGAGGGAGAGATGACTTACATCATCGTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR TCA 72 bp ATCACAAGGCTGCTGAGAGTACGACTGGACAGTATTTaGGCGCAGCAAACATTGGACAGCACTGTACAACTC +
Preference number: 3 (lower is better)
Translates to: ITRLLRVRLDSI*AQQTLDSTVQL
Trigger: GAGTTGTACAGTGCTGTCCAATGTTTGCTGCGCTCAAATACTGTCCAGTCGTACTCTCAGCAGCCTTGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR-3UTR CAA 90 bp GCGAACCTGAGTCAGCACTGCATGATGGGAAGCAGCAGCCATACAGTAGGAGGTTGTTTTTGTTTTTGTTaGAATGTGGCCTCTGAGGAT +
Preference number: 3 (lower is better)
Translates to: ANLSQHCMMGSSSHTVGGCFCFC*NVASED
Trigger: ATCCTCAGAGGCCACATTCAAACAAAAACAAAAACA...ACCTCCTACTGTATGGCTGCTGCTTCCCATCATGCAGTGCTGACTCAGGTTCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR-3UTR CAA 90 bp GATTCCCAGTACCCACACGGCTGCACACAGATATCTGTAACTCCAGTCTCAGGGACCCTGATGCCTTATTaGATTAAACTTCTGGTTCTC +
Preference number: 3 (lower is better)
Translates to: DSQYPHGCTQISVTPVSGTLMPY*IKLLVL
Trigger: GAGAACCAGAAGTTTAATCAAATAAGGCATCAGGGT...CCCTGAGACTGGAGTTACAGATATCTGTGTGCAGCCGTGTGGGTACTGGGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR CCA 72 bp TGTGGAGGCCTCCCTACAATCGCAGTACTTGGAAAATaGAGATGGGATTCTCTGGAGCAATCTGTAAGGAAT +
Preference number: 3 (lower is better)
Translates to: CGGLPTIAVLGK*RWDSLEQSVRN
Trigger: ATTCCTTACAGATTGCTCCAGAGAATCCCATCTCCATTTTCCAAGTACTGCGATTGTAGGGAGGCCTCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR CCA 72 bp TCCCAGGTATCTTCCTATATCCACATCCCCGCCACTTaGATTACAATGGCAAACTGCCATGCCTGTTTTGTT +
Preference number: 3 (lower is better)
Translates to: SQVSSYIHIPAT*ITMANCHACFV
Trigger: AACAAAACAGGCATGGCAGTTTGCCATTGTAATCCAAGTGGCGGGGATGTGGATATAGGAAGATACCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR TCA 72 bp ATCGTCTGGTACTTCAGCCTGAGTGGAGTTGCTCAGTaGTGTCACCTCTTTACTAAGATCAGCATTTTCACC +
Preference number: 3 (lower is better)
Translates to: IVWYFSLSGVAQ*CHLFTKISIFT
Trigger: GGTGAAAATGCTGATCTTAGTAAAGAGGTGACATCACTGAGCAACTCCACTCAGGCTGAAGTACCAGACGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR CCA 72 bp CAGGGAAAGAGCATACAGAATTTCCTACTGGTGGAGTaGAAGCTGTTGGAACAAAAGCTATCTGGGAGAACT +
Preference number: 3 (lower is better)
Translates to: QGKSIQNFLLVE*KLLEQKLSGRT
Trigger: AGTTCTCCCAGATAGCTTTTGTTCCAACAGCTTCCACTCCACCAGTAGGAAATTCTGTATGCTCTTTCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR CCA 72 bp GTGACTATGCAGGCTGCAGCTGTATTTAGCATGTCCTaGTATCCCCAGTACTTAATACGACAAGATATGACC +
Preference number: 3 (lower is better)
Translates to: VTMQAAAVFSMS*YPQYLIRQDMT
Trigger: GGTCATATCTTGTCGTATTAAGTACTGGGGATACCAGGACATGCTAAATACAGCTGCAGCCTGCATAGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR CCA 72 bp TATACCAGGGAAAGAGCATACAGAATTTCCTACTGGTaGAGTGGAAGCTGTTGGAACAAAAGCTATCTGGGA +
Preference number: 3 (lower is better)
Translates to: YTRERAYRISYW*SGSCWNKSYLG
Trigger: TCCCAGATAGCTTTTGTTCCAACAGCTTCCACTCCACCAGTAGGAAATTCTGTATGCTCTTTCCCTGGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR-3UTR CAA 90 bp ATTTATCACAATTCAGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATTCATTTATTCAGGGGTaGACAGAGCATGGGGTCACC +
Preference number: 3 (lower is better)
Translates to: IYHNSESTIMSMGHTWQYSFIQG*TEHGVT
Trigger: GGTGACCCCATGCTCTGTCAACCCCTGAATAAATGA...ATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCTGAATTGTGATAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
3UTR TCA 72 bp CATTCAAATTATTTAGTTCCCAGATCACAAGGCTGCTaGGAGTACGACTGGACAGTATTTGAGCGCAGCAAA +
Preference number: 3 (lower is better)
Translates to: HSNYLVPRSQGC*EYDWTVFERSK
Trigger: TTTGCTGCGCTCAAATACTGTCCAGTCGTACTCTCAGCAGCCTTGTGATCTGGGAACTAAATAATTTGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR GCA 72 bp ACACCATCAATGTACTCTCTGTCATGTTTCTTCGTCTaGCAATCTCTCTTCACTATGATAGAATCTGCCCTG +
Preference number: 3 (lower is better)
Translates to: TPSMYSLSCFFV*QSLFTMIESAL
Trigger: CAGGGCAGATTCTATCATAGTGAAGAGAGATTGGCAGACGAAGAAACATGACAGAGAGTACATTGATGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR CCA 72 bp CATTATACCAGGGAAAGAGCATACAGAATTTCCTACTaGTGGAGTGGAAGCTGTTGGAACAAAAGCTATCTG +
Preference number: 3 (lower is better)
Translates to: HYTRERAYRISY*WSGSCWNKSYL
Trigger: CAGATAGCTTTTGTTCCAACAGCTTCCACTCCACCAGTAGGAAATTCTGTATGCTCTTTCCCTGGTATAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR TCA 72 bp CTTCTGAGGCAAAAGGAAAAGAGGCAAACCGTCCAGTaGAGAAGACACAGCTTATATATGAATGTCTTGACT +
Preference number: 3 (lower is better)
Translates to: LLRQKEKRQTVQ*RRHSLYMNVLT
Trigger: AGTCAAGACATTCATATATAAGCTGTGTCTTCTTCACTGGACGGTTTGCCTCTTTTCCTTTTGCCTCAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
3UTR CCA 72 bp CTTGCTTGGCTACCCCTTATTACTCACAGCTCAGGATaGGTACATTCAAATTATTTAGTTCCCAGATCACAA +
Preference number: 3 (lower is better)
Translates to: LAWLPLITHSSG*VHSNYLVPRSQ
Trigger: TTGTGATCTGGGAACTAAATAATTTGAATGTACCCATCCTGAGCTGTGAGTAATAAGGGGTAGCCAAGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR GCA 72 bp GGATTTGTAGCCGCTCTAGGGCTCATTAAAATTACTTaGCATACACAGAACAGAACAGACTCTATTATGAAC +
Preference number: 3 (lower is better)
Translates to: GFVAALGLIKIT*HTQNRTDSIMN
Trigger: GTTCATAATAGAGTCTGTTCTGTTCTGTGTATGGCAAGTAATTTTAATGAGCCCTAGAGCGGCTACAAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR CCA 72 bp AATTCAGAAAGCACAATTATGAGCATGGGCCACACTTaGCAGTATATCATAGCAAAAGTTATAGTGTTCCAA +
Preference number: 3 (lower is better)
Translates to: NSESTIMSMGHT*QYIIAKVIVFQ
Trigger: TTGGAACACTATAACTTTTGCTATGATATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCTGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp AGCTATCCCGCTGTGCAGCTCTGCAGCTGTGCAGCTATCTTCAGGACCCTGAGCCTGCCGTGGCAGGTCTaGAGCCCTTTCGTGACACGA +
Preference number: 4 (lower is better)
Translates to: SYPAVQLCSCAAIFRTLSLPWQV*SPFVTR
Trigger: TCGTGTCACGAAAGGGCTCCAGACCTGCCACGGCAG...GCTCAGGGTCCTGAAGATAGCTGCACAGCTGCAGAGCTGCACAGCGGGATAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR GCA 90 bp AGCTATCCCGCTGTGCAGCTCTGCAGCTGTGCAGCTATCTTCAGGACCCTGAGCACGAGGGCTTCAGCATaGTGCCTTGAAGACGTACCC +
Preference number: 4 (lower is better)
Translates to: SYPAVQLCSCAAIFRTLSTRASA*CLEDVP
Trigger: GGGTACGTCTTCAAGGCAGCATGCTGAAGCCCTCGT...GCTCAGGGTCCTGAAGATAGCTGCACAGCTGCAGAGCTGCACAGCGGGATAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR GCA 90 bp CTTAAAGCAAGAAGCAAAAGTCGCAGCTATCCCGCTGTGCAGCTCTGCAGCTGTCGAGGATGGGCGGCCTaGGCAGGTGCAGTTGTAGCC +
Preference number: 4 (lower is better)
Translates to: LKARSKSRSYPAVQLCSCRGWAA*AGAVVA
Trigger: GGCTACAACTGCACCTGCGCAGGCCGCCCATCCTCG...ACAGCTGCAGAGCTGCACAGCGGGATAGCTGCGACTTTTGCTTCTTGCTTTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
CDS-3UTR CCA 90 bp AGCTATCCCGCTGTGCAGCTCTGCAGCTGTGCAGCTATCTTCAGGACCCTGAGCGTGCCCAGGCTCTCTTaGCAGATGTGTTCACAGCCT +
Preference number: 4 (lower is better)
Translates to: SYPAVQLCSCAAIFRTLSVPRLS*QMCSQP
Trigger: AGGCTGTGAACACATCTGCCAAGAGAGCCTGGGCAC...GCTCAGGGTCCTGAAGATAGCTGCACAGCTGCAGAGCTGCACAGCGGGATAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp AGCTATCCCGCTGTGCAGCTCTGCAGCTGTGCAGCTATCTTCAGGACCCTGAGCGCAGGGATCTGCACCTaGTTTTGCCAATGGATGGAC +
Preference number: 4 (lower is better)
Translates to: SYPAVQLCSCAAIFRTLSAGICT*FCQWMD
Trigger: GTCCATCCATTGGCAAAACCAGGTGCAGATCCCTGC...GCTCAGGGTCCTGAAGATAGCTGCACAGCTGCAGAGCTGCACAGCGGGATAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR TCA 90 bp GCGAACCTGAGTCAGCACTGCATGATGGGAAGCAGCAGCCATACAGTAGGAGGTTCCGAGACCCACAGGTaGTCCTCAAACACGGCTAGA +
Preference number: 4 (lower is better)
Translates to: ANLSQHCMMGSSSHTVGGSETHR*SSNTAR
Trigger: TCTAGCCGTGTTTGAGGATCACCTGTGGGTCTCGGA...ACCTCCTACTGTATGGCTGCTGCTTCCCATCATGCAGTGCTGACTCAGGTTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
CDS-3UTR TCA 90 bp AGCTATCCCGCTGTGCAGCTCTGCAGCTGTGCAGCTATCTTCAGGACCCTGAGCTTCAGCATGCTGCCTTaGAGACGTACCCTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: SYPAVQLCSCAAIFRTLSFSMLP*RRTLFW
Trigger: CCAAAACAGGGTACGTCTTCAAGGCAGCATGCTGAA...GCTCAGGGTCCTGAAGATAGCTGCACAGCTGCAGAGCTGCACAGCGGGATAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR GCA 90 bp AGCTATCCCGCTGTGCAGCTCTGCAGCTGTGCAGCTATCTTCAGGACCCTGAGCCCATGTCTGCTGAGATaGCAGCATCCACCACCAATT +
Preference number: 4 (lower is better)
Translates to: SYPAVQLCSCAAIFRTLSPCLLR*QHPPPI
Trigger: AATTGGTGGTGGATGCTGGCATCTCAGCAGACATGG...GCTCAGGGTCCTGAAGATAGCTGCACAGCTGCAGAGCTGCACAGCGGGATAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS-3UTR GCA 90 bp CTTAAAGCAAGAAGCAAAAGTCGCAGCTATCCCGCTGTGCAGCTCTGCAGCTGTCTCCTGGCCCTTGGATaGACAGCTATTCCTCGCGGC +
Preference number: 4 (lower is better)
Translates to: LKARSKSRSYPAVQLCSCLLALG*TAIPRG
Trigger: GCCGCGAGGAATAGCTGTGCATCCAAGGGCCAGGAG...ACAGCTGCAGAGCTGCACAGCGGGATAGCTGCGACTTTTGCTTCTTGCTTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR GCA 90 bp ACCTGCTTTAACCCACTCCTTCTGAGGCAAAAGGAAAAGAGGCAAACCGTCCAGCTCCCTCCGTGTTGGTaGAGGCGGCATTCTCACCGC +
Preference number: 4 (lower is better)
Translates to: TCFNPLLLRQKEKRQTVQLPPCW*RRHSHR
Trigger: GCGGTGAGAATGCCGCCTGCACCAACACGGAGGGAG...CTGGACGGTTTGCCTCTTTTCCTTTTGCCTCAGAAGGAGTGGGTTAAAGCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
CDS-3UTR CCA 90 bp ACCTGCTTTAACCCACTCCTTCTGAGGCAAAAGGAAAAGAGGCAAACCGTCCAGGAGCAACAGCCAGGTTaGCCTTCGGCCCCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: TCFNPLLLRQKEKRQTVQEQQPG*PSAPGH
Trigger: ATGCCCTGGGGCCGAAGGCCAACCTGGCTGTTGCTC...CTGGACGGTTTGCCTCTTTTCCTTTTGCCTCAGAAGGAGTGGGTTAAAGCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS-3UTR CCA 90 bp AGCTATCCCGCTGTGCAGCTCTGCAGCTGTGCAGCTATCTTCAGGACCCTGAGCAGACGTACCCTGTTTTaGCCAGTCCTCTTGTTCACC +
Preference number: 4 (lower is better)
Translates to: SYPAVQLCSCAAIFRTLSRRTLF*PVLLFT
Trigger: GGTGAACAAGAGGACTGGCCAAAACAGGGTACGTCT...GCTCAGGGTCCTGAAGATAGCTGCACAGCTGCAGAGCTGCACAGCGGGATAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp AGCTATCCCGCTGTGCAGCTCTGCAGCTGTGCAGCTATCTTCAGGACCCTGAGCACCACAAACCAAGGTTaGGGACAAGAAGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: SYPAVQLCSCAAIFRTLSTTNQG*GQEATA
Trigger: AGCTGTGGCTTCTTGTCCCCAACCTTGGTTTGTGGT...GCTCAGGGTCCTGAAGATAGCTGCACAGCTGCAGAGCTGCACAGCGGGATAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR GCA 90 bp AGCTATCCCGCTGTGCAGCTCTGCAGCTGTGCAGCTATCTTCAGGACCCTGAGCAAAACCATTCCCATCTaGCGGCTGAGCAGAACTTTG +
Preference number: 4 (lower is better)
Translates to: SYPAVQLCSCAAIFRTLSKTIPI*RLSRTL
Trigger: CAAAGTTCTGCTCAGCCGGCAGATGGGAATGGTTTT...GCTCAGGGTCCTGAAGATAGCTGCACAGCTGCAGAGCTGCACAGCGGGATAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR GCA 90 bp ACCTGCTTTAACCCACTCCTTCTGAGGCAAAAGGAAAAGAGGCAAACCGTCCAGCTCCTGGCCCTTGGATaGACAGCTATTCCTCGCGGC +
Preference number: 4 (lower is better)
Translates to: TCFNPLLLRQKEKRQTVQLLALG*TAIPRG
Trigger: GCCGCGAGGAATAGCTGTGCATCCAAGGGCCAGGAG...CTGGACGGTTTGCCTCTTTTCCTTTTGCCTCAGAAGGAGTGGGTTAAAGCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR GCA 90 bp CTTAAAGCAAGAAGCAAAAGTCGCAGCTATCCCGCTGTGCAGCTCTGCAGCTGTGCTGACTGGAGAGAATaGAGCTTCTCCGGCCCCACA +
Preference number: 4 (lower is better)
Translates to: LKARSKSRSYPAVQLCSCADWRE*SFSGPT
Trigger: TGTGGGGCCGGAGAAGCTGCATTCTCTCCAGTCAGC...ACAGCTGCAGAGCTGCACAGCGGGATAGCTGCGACTTTTGCTTCTTGCTTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp AGCTATCCCGCTGTGCAGCTCTGCAGCTGTGCAGCTATCTTCAGGACCCTGAGCATCAGTCTTTCTCGCTaGGACCCATCCATATTAGCC +
Preference number: 4 (lower is better)
Translates to: SYPAVQLCSCAAIFRTLSISLSR*DPSILA
Trigger: GGCTAATATGGATGGGTCCCAGCGAGAAAGACTGAT...GCTCAGGGTCCTGAAGATAGCTGCACAGCTGCAGAGCTGCACAGCGGGATAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp GATTCCCAGTACCCACACGGCTGCACACAGATATCTGTAACTCCAGTCTCAGGGCAGTCTCCTGGCCCTTaGATGCACAGCTATTCCTCG +
Preference number: 4 (lower is better)
Translates to: DSQYPHGCTQISVTPVSGQSPGP*MHSYSS
Trigger: CGAGGAATAGCTGTGCATCCAAGGGCCAGGAGACTG...CCCTGAGACTGGAGTTACAGATATCTGTGTGCAGCCGTGTGGGTACTGGGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
CDS-3UTR CCA 90 bp ACCTGCTTTAACCCACTCCTTCTGAGGCAAAAGGAAAAGAGGCAAACCGTCCAGAGCCTCCCTCCGTGTTaGTGCAGGCGGCATTCTCAC +
Preference number: 4 (lower is better)
Translates to: TCFNPLLLRQKEKRQTVQSLPPC*CRRHSH
Trigger: GTGAGAATGCCGCCTGCACCAACACGGAGGGAGGCT...CTGGACGGTTTGCCTCTTTTCCTTTTGCCTCAGAAGGAGTGGGTTAAAGCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
CDS-3UTR CCA 90 bp AGCTATCCCGCTGTGCAGCTCTGCAGCTGTGCAGCTATCTTCAGGACCCTGAGCGCAGACTCCCATTCTTaGGGTCTTGGTGTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: SYPAVQLCSCAAIFRTLSADSHS*GLGVSL
Trigger: TAGAGAAACACCAAGACCCCAAGAATGGGAGTCTGC...GCTCAGGGTCCTGAAGATAGCTGCACAGCTGCAGAGCTGCACAGCGGGATAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR TCA 90 bp GATTCCCAGTACCCACACGGCTGCACACAGATATCTGTAACTCCAGTCTCAGGGTTCCCATCTGCCGGCTaGGCAGAACTTTGTAGTCTG +
Preference number: 4 (lower is better)
Translates to: DSQYPHGCTQISVTPVSGFPSAG*AELCSL
Trigger: CAGACTACAAAGTTCTGCTCAGCCGGCAGATGGGAA...CCCTGAGACTGGAGTTACAGATATCTGTGTGCAGCCGTGTGGGTACTGGGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
CDS-3UTR TCA 90 bp CTTAAAGCAAGAAGCAAAAGTCGCAGCTATCCCGCTGTGCAGCTCTGCAGCTGTTCCGAGACCCACAGGTaGTCCTCAAACACGGCTAGA +
Preference number: 4 (lower is better)
Translates to: LKARSKSRSYPAVQLCSCSETHR*SSNTAR
Trigger: TCTAGCCGTGTTTGAGGATCACCTGTGGGTCTCGGA...ACAGCTGCAGAGCTGCACAGCGGGATAGCTGCGACTTTTGCTTCTTGCTTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR TCA 90 bp CTTAAAGCAAGAAGCAAAAGTCGCAGCTATCCCGCTGTGCAGCTCTGCAGCTGTATGGACCACAACCAGTaGCGAGGGCTTCAGCATGCT +
Preference number: 4 (lower is better)
Translates to: LKARSKSRSYPAVQLCSCMDHNQ*RGLQHA
Trigger: AGCATGCTGAAGCCCTCGTCACTGGTTGTGGTCCAT...ACAGCTGCAGAGCTGCACAGCGGGATAGCTGCGACTTTTGCTTCTTGCTTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR TCA 90 bp AGCTATCCCGCTGTGCAGCTCTGCAGCTGTGCAGCTATCTTCAGGACCCTGAGCTTCATAGTTCATGCCTaGCACCATGATTTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: SYPAVQLCSCAAIFRTLSFIVHA*HHDFSH
Trigger: GTGGCTGAAATCATGGTGTCAGGCATGAACTATGAA...GCTCAGGGTCCTGAAGATAGCTGCACAGCTGCAGAGCTGCACAGCGGGATAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR GCA 90 bp CTTAAAGCAAGAAGCAAAAGTCGCAGCTATCCCGCTGTGCAGCTCTGCAGCTGTACGAGGGCTTCAGCATaGTGCCTTGAAGACGTACCC +
Preference number: 4 (lower is better)
Translates to: LKARSKSRSYPAVQLCSCTRASA*CLEDVP
Trigger: GGGTACGTCTTCAAGGCAGCATGCTGAAGCCCTCGT...ACAGCTGCAGAGCTGCACAGCGGGATAGCTGCGACTTTTGCTTCTTGCTTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR GCA 90 bp AGCTATCCCGCTGTGCAGCTCTGCAGCTGTGCAGCTATCTTCAGGACCCTGAGCTCCAGTGATTCAATATaGATGCACACGCCACCATTG +
Preference number: 4 (lower is better)
Translates to: SYPAVQLCSCAAIFRTLSSSDSI*MHTPPL
Trigger: CAATGGTGGCGTGTGCATGCATATTGAATCACTGGA...GCTCAGGGTCCTGAAGATAGCTGCACAGCTGCAGAGCTGCACAGCGGGATAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp AGCTATCCCGCTGTGCAGCTCTGCAGCTGTGCAGCTATCTTCAGGACCCTGAGCAGGTGTCACAAAGGATaGATGGAGGTTAATCCTGAC +
Preference number: 4 (lower is better)
Translates to: SYPAVQLCSCAAIFRTLSRCHKG*MEVNPD
Trigger: GTCAGGATTAACCTCCATCCATCCTTTGTGACACCT...GCTCAGGGTCCTGAAGATAGCTGCACAGCTGCAGAGCTGCACAGCGGGATAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS-3UTR CCA 90 bp CTTAAAGCAAGAAGCAAAAGTCGCAGCTATCCCGCTGTGCAGCTCTGCAGCTGTCAGTCTCCTGGCCCTTaGATGCACAGCTATTCCTCG +
Preference number: 4 (lower is better)
Translates to: LKARSKSRSYPAVQLCSCQSPGP*MHSYSS
Trigger: CGAGGAATAGCTGTGCATCCAAGGGCCAGGAGACTG...ACAGCTGCAGAGCTGCACAGCGGGATAGCTGCGACTTTTGCTTCTTGCTTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
3UTR CAA 72 bp GAGCAGCGTGTGGAGGCCTCCCTACAATCGCAGTACTaGGAAAATGGAGATGGGATTCTCTGGAGCAATCTG +
Preference number: 4 (lower is better)
Translates to: EQRVEASLQSQY*ENGDGILWSNL
Trigger: CAGATTGCTCCAGAGAATCCCATCTCCATTTTCCAAGTACTGCGATTGTAGGGAGGCCTCCACACGCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
CDS-3UTR TCA 90 bp AGCTATCCCGCTGTGCAGCTCTGCAGCTGTGCAGCTATCTTCAGGACCCTGAGCAGATTCTCTCCTGGATaGTTATTCGATGATGCTTCC +
Preference number: 4 (lower is better)
Translates to: SYPAVQLCSCAAIFRTLSRFSPG*LFDDAS
Trigger: GGAAGCATCATCGAATAATCATCCAGGAGAGAATCT...GCTCAGGGTCCTGAAGATAGCTGCACAGCTGCAGAGCTGCACAGCGGGATAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR TCA 90 bp ACCTGCTTTAACCCACTCCTTCTGAGGCAAAAGGAAAAGAGGCAAACCGTCCAGTCCGAGACCCACAGGTaGTCCTCAAACACGGCTAGA +
Preference number: 4 (lower is better)
Translates to: TCFNPLLLRQKEKRQTVQSETHR*SSNTAR
Trigger: TCTAGCCGTGTTTGAGGATCACCTGTGGGTCTCGGA...CTGGACGGTTTGCCTCTTTTCCTTTTGCCTCAGAAGGAGTGGGTTAAAGCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR TCA 90 bp ACCTGCTTTAACCCACTCCTTCTGAGGCAAAAGGAAAAGAGGCAAACCGTCCAGATGGACCACAACCAGTaGCGAGGGCTTCAGCATGCT +
Preference number: 4 (lower is better)
Translates to: TCFNPLLLRQKEKRQTVQMDHNQ*RGLQHA
Trigger: AGCATGCTGAAGCCCTCGTCACTGGTTGTGGTCCAT...CTGGACGGTTTGCCTCTTTTCCTTTTGCCTCAGAAGGAGTGGGTTAAAGCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR GCA 90 bp TACCAGGGAAAGAGCATACAGAATTTCCTACTGGTGGAGTGGAAGCTGTTGGAACTCCTGGCCCTTGGATaGACAGCTATTCCTCGCGGC +
Preference number: 4 (lower is better)
Translates to: YQGKSIQNFLLVEWKLLELLALG*TAIPRG
Trigger: GCCGCGAGGAATAGCTGTGCATCCAAGGGCCAGGAG...TTCCAACAGCTTCCACTCCACCAGTAGGAAATTCTGTATGCTCTTTCCCTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
CDS-3UTR GCA 90 bp CTTAAAGCAAGAAGCAAAAGTCGCAGCTATCCCGCTGTGCAGCTCTGCAGCTGTAGCCTTCTGAGCATCTaGAGACGTAGCCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: LKARSKSRSYPAVQLCSCSLLSI*RRSHLQ
Trigger: CTGAAGGTGGCTACGTCTGCAGATGCTCAGAAGGCT...ACAGCTGCAGAGCTGCACAGCGGGATAGCTGCGACTTTTGCTTCTTGCTTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR GCA 90 bp CTTAAAGCAAGAAGCAAAAGTCGCAGCTATCCCGCTGTGCAGCTCTGCAGCTGTGCCAGCATCTACTACTaGACCATTCGTACCATCCGC +
Preference number: 4 (lower is better)
Translates to: LKARSKSRSYPAVQLCSCASIYY*TIRTIR
Trigger: GCGGATGGTACGAATGGTGCAGTAGTAGATGCTGGC...ACAGCTGCAGAGCTGCACAGCGGGATAGCTGCGACTTTTGCTTCTTGCTTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR GCA 90 bp CTTAAAGCAAGAAGCAAAAGTCGCAGCTATCCCGCTGTGCAGCTCTGCAGCTGTGGAATCCAGCAGCTTTaGCCTGTGCCCATTCCATCT +
Preference number: 4 (lower is better)
Translates to: LKARSKSRSYPAVQLCSCGIQQL*PVPIPS
Trigger: AGATGGAATGGGCACAGGGCAAAGCTGCTGGATTCC...ACAGCTGCAGAGCTGCACAGCGGGATAGCTGCGACTTTTGCTTCTTGCTTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp ACCTGCTTTAACCCACTCCTTCTGAGGCAAAAGGAAAAGAGGCAAACCGTCCAGCAGTCTCCTGGCCCTTaGATGCACAGCTATTCCTCG +
Preference number: 4 (lower is better)
Translates to: TCFNPLLLRQKEKRQTVQQSPGP*MHSYSS
Trigger: CGAGGAATAGCTGTGCATCCAAGGGCCAGGAGACTG...CTGGACGGTTTGCCTCTTTTCCTTTTGCCTCAGAAGGAGTGGGTTAAAGCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp TTCCCAGTACCCACACGGCTGCACACAGATATCTGTAACTCCAGTCTCAGGGGACACCCTTATTACCGATaGGATAGCCCAATCCGAGAC +
Preference number: 4 (lower is better)
Translates to: FPVPTRLHTDICNSSLRGHPYYR*DSPIRD
Trigger: GTCTCGGATTGGGCTATCCCATCGGTAATAAGGGTG...TCCCCTGAGACTGGAGTTACAGATATCTGTGTGCAGCCGTGTGGGTACTGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
CDS-3UTR TCA 90 bp TTCCCAGTACCCACACGGCTGCACACAGATATCTGTAACTCCAGTCTCAGGGGATATCTACTCCTTCTGTaGTCAGTCTTTCTCGCTGGG +
Preference number: 4 (lower is better)
Translates to: FPVPTRLHTDICNSSLRGYLLLL*SVFLAG
Trigger: CCCAGCGAGAAAGACTGATCACAGAAGGAGTAGATA...TCCCCTGAGACTGGAGTTACAGATATCTGTGTGCAGCCGTGTGGGTACTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
CDS-3UTR TCA 90 bp ACCTGCTTTAACCCACTCCTTCTGAGGCAAAAGGAAAAGAGGCAAACCGTCCAGGCTAGAGAGAAGGGGTaGCCTACGTCGTTCTGGATA +
Preference number: 4 (lower is better)
Translates to: TCFNPLLLRQKEKRQTVQAREKG*PTSFWI
Trigger: TATCCAGAACGACGTAGGTCACCCCTTCTCTCTAGC...CTGGACGGTTTGCCTCTTTTCCTTTTGCCTCAGAAGGAGTGGGTTAAAGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR TCA 90 bp CTTAAAGCAAGAAGCAAAAGTCGCAGCTATCCCGCTGTGCAGCTCTGCAGCTGTTCATGCCTGACACCATaGTTTCAGCCACTAGTGTGG +
Preference number: 4 (lower is better)
Translates to: LKARSKSRSYPAVQLCSCSCLTP*FQPLVW
Trigger: CCACACTAGTGGCTGAAATCATGGTGTCAGGCATGA...ACAGCTGCAGAGCTGCACAGCGGGATAGCTGCGACTTTTGCTTCTTGCTTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR GCA 90 bp AGCTATCCCGCTGTGCAGCTCTGCAGCTGTGCAGCTATCTTCAGGACCCTGAGCCTTCAGGGCTGTCTGTaGAAAATATATCTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: SYPAVQLCSCAAIFRTLSLQGCL*KIYLAF
Trigger: GAAAGCAAGATATATTTTGCACAGACAGCCCTGAAG...GCTCAGGGTCCTGAAGATAGCTGCACAGCTGCAGAGCTGCACAGCGGGATAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR GCA 90 bp AAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTACCGAGGATGGGCGGCCTaGGCAGGTGCAGTTGTAGCC +
Preference number: 4 (lower is better)
Translates to: KSVAFYHHQPGLLFSLLYRGWAA*AGAVVA
Trigger: GGCTACAACTGCACCTGCGCAGGCCGCCCATCCTCG...GTACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
CDS-3UTR CCA 90 bp AGCTATCCCGCTGTGCAGCTCTGCAGCTGTGCAGCTATCTTCAGGACCCTGAGCATGTGTCGGATGTCCTaGGAATTTGCAAACAGTAAA +
Preference number: 4 (lower is better)
Translates to: SYPAVQLCSCAAIFRTLSMCRMS*EFANSK
Trigger: TTTACTGTTTGCAAATTCCCAGGACATCCGACACAT...GCTCAGGGTCCTGAAGATAGCTGCACAGCTGCAGAGCTGCACAGCGGGATAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS-3UTR CCA 90 bp GATTCCCAGTACCCACACGGCTGCACACAGATATCTGTAACTCCAGTCTCAGGGATCAGTCTTTCTCGCTaGGACCCATCCATATTAGCC +
Preference number: 4 (lower is better)
Translates to: DSQYPHGCTQISVTPVSGISLSR*DPSILA
Trigger: GGCTAATATGGATGGGTCCCAGCGAGAAAGACTGAT...CCCTGAGACTGGAGTTACAGATATCTGTGTGCAGCCGTGTGGGTACTGGGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
CDS-3UTR CCA 90 bp ACCTGCTTTAACCCACTCCTTCTGAGGCAAAAGGAAAAGAGGCAAACCGTCCAGTCCAGAACAGTCTCCTaGCCCTTGGATGCACAGCTA +
Preference number: 4 (lower is better)
Translates to: TCFNPLLLRQKEKRQTVQSRTVS*PLDAQL
Trigger: TAGCTGTGCATCCAAGGGCCAGGAGACTGTTCTGGA...CTGGACGGTTTGCCTCTTTTCCTTTTGCCTCAGAAGGAGTGGGTTAAAGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp CTTAAAGCAAGAAGCAAAAGTCGCAGCTATCCCGCTGTGCAGCTCTGCAGCTGTCACCCTTATTACCGATaGGATAGCCCAATCCGAGAC +
Preference number: 4 (lower is better)
Translates to: LKARSKSRSYPAVQLCSCHPYYR*DSPIRD
Trigger: GTCTCGGATTGGGCTATCCCATCGGTAATAAGGGTG...ACAGCTGCAGAGCTGCACAGCGGGATAGCTGCGACTTTTGCTTCTTGCTTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp CTTAAAGCAAGAAGCAAAAGTCGCAGCTATCCCGCTGTGCAGCTCTGCAGCTGTGGTTTTGCCAATGGATaGACCACAACCAGTGACGAG +
Preference number: 4 (lower is better)
Translates to: LKARSKSRSYPAVQLCSCGFANG*TTTSDE
Trigger: CTCGTCACTGGTTGTGGTCCATCCATTGGCAAAACC...ACAGCTGCAGAGCTGCACAGCGGGATAGCTGCGACTTTTGCTTCTTGCTTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp CTTAAAGCAAGAAGCAAAAGTCGCAGCTATCCCGCTGTGCAGCTCTGCAGCTGTTTTCGGTCCAAATGGTaGCCATCTTCCCCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: LKARSKSRSYPAVQLCSCFRSKW*PSSPRR
Trigger: TCTCCTTGGGGAAGATGGCCACCATTTGGACCGAAA...ACAGCTGCAGAGCTGCACAGCGGGATAGCTGCGACTTTTGCTTCTTGCTTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp CTTAAAGCAAGAAGCAAAAGTCGCAGCTATCCCGCTGTGCAGCTCTGCAGCTGTACCACAAACCAAGGTTaGGGACAAGAAGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: LKARSKSRSYPAVQLCSCTTNQG*GQEATA
Trigger: AGCTGTGGCTTCTTGTCCCCAACCTTGGTTTGTGGT...ACAGCTGCAGAGCTGCACAGCGGGATAGCTGCGACTTTTGCTTCTTGCTTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
3UTR CAA 72 bp ACAGACAGTATGCTACTTAGGGGCCTGAGGATAAAGTaGGGACCCTCAGCTTTCAGGCAAAGAGCAGCGTGT +
Preference number: 4 (lower is better)
Translates to: TDSMLLRGLRIK*GPSAFRQRAAC
Trigger: ACACGCTGCTCTTTGCCTGAAAGCTGAGGGTCCCAACTTTATCCTCAGGCCCCTAAGTAGCATACTGTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR CAA 72 bp CTTTACATTATGCACGACGGGTGGGGCTTGCGGCCCTaGAGCCCTAAAATCTGCTCTTTAGAGCACAGAAGT +
Preference number: 4 (lower is better)
Translates to: LYIMHDGWGLRP*SPKICSLEHRS
Trigger: ACTTCTGTGCTCTAAAGAGCAGATTTTAGGGCTCAAGGGCCGCAAGCCCCACCCGTCGTGCATAATGTAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
CDS-3UTR GCA 90 bp ACCTGCTTTAACCCACTCCTTCTGAGGCAAAAGGAAAAGAGGCAAACCGTCCAGCAGCCTGAGTGGAGTTaGTCAGTGATGTCACCTCTT +
Preference number: 4 (lower is better)
Translates to: TCFNPLLLRQKEKRQTVQQPEWS*SVMSPL
Trigger: AAGAGGTGACATCACTGAGCAACTCCACTCAGGCTG...CTGGACGGTTTGCCTCTTTTCCTTTTGCCTCAGAAGGAGTGGGTTAAAGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR GCA 90 bp CAAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTACTCCCTCCGTGTTGGTaGAGGCGGCATTCTCACCGC +
Preference number: 4 (lower is better)
Translates to: QVCSILPSSAWFVIFPSVLPPCW*RRHSHR
Trigger: GCGGTGAGAATGCCGCCTGCACCAACACGGAGGGAG...TACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
CDS-3UTR CCA 90 bp ACCTGCTTTAACCCACTCCTTCTGAGGCAAAAGGAAAAGAGGCAAACCGTCCAGGGTTTTGCCAATGGATaGACCACAACCAGTGACGAG +
Preference number: 4 (lower is better)
Translates to: TCFNPLLLRQKEKRQTVQGFANG*TTTSDE
Trigger: CTCGTCACTGGTTGTGGTCCATCCATTGGCAAAACC...CTGGACGGTTTGCCTCTTTTCCTTTTGCCTCAGAAGGAGTGGGTTAAAGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp TACCAGGGAAAGAGCATACAGAATTTCCTACTGGTGGAGTGGAAGCTGTTGGAAGTGCCCAGGCTCTCTTaGCAGATGTGTTCACAGCCT +
Preference number: 4 (lower is better)
Translates to: YQGKSIQNFLLVEWKLLEVPRLS*QMCSQP
Trigger: AGGCTGTGAACACATCTGCCAAGAGAGCCTGGGCAC...TTCCAACAGCTTCCACTCCACCAGTAGGAAATTCTGTATGCTCTTTCCCTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
CDS-3UTR CCA 90 bp ACCTGCTTTAACCCACTCCTTCTGAGGCAAAAGGAAAAGAGGCAAACCGTCCAGACCACAAACCAAGGTTaGGGACAAGAAGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: TCFNPLLLRQKEKRQTVQTTNQG*GQEATA
Trigger: AGCTGTGGCTTCTTGTCCCCAACCTTGGTTTGTGGT...CTGGACGGTTTGCCTCTTTTCCTTTTGCCTCAGAAGGAGTGGGTTAAAGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp CTTAAAGCAAGAAGCAAAAGTCGCAGCTATCCCGCTGTGCAGCTCTGCAGCTGTCCATTCTTGGGGTCTTaGTGTTTCTCTAGGACCACA +
Preference number: 4 (lower is better)
Translates to: LKARSKSRSYPAVQLCSCPFLGS*CFSRTT
Trigger: TGTGGTCCTAGAGAAACACCAAGACCCCAAGAATGG...ACAGCTGCAGAGCTGCACAGCGGGATAGCTGCGACTTTTGCTTCTTGCTTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp CTTAAAGCAAGAAGCAAAAGTCGCAGCTATCCCGCTGTGCAGCTCTGCAGCTGTCCCATTCCATCTATGTaGGGCTTCTGTCTCCATGAA +
Preference number: 4 (lower is better)
Translates to: LKARSKSRSYPAVQLCSCPIPSM*GFCLHE
Trigger: TTCATGGAGACAGAAGCCCCACATAGATGGAATGGG...ACAGCTGCAGAGCTGCACAGCGGGATAGCTGCGACTTTTGCTTCTTGCTTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR TCA 90 bp ACCTGCTTTAACCCACTCCTTCTGAGGCAAAAGGAAAAGAGGCAAACCGTCCAGTATCTACTCCTTCTGTaGTCAGTCTTTCTCGCTGGG +
Preference number: 4 (lower is better)
Translates to: TCFNPLLLRQKEKRQTVQYLLLL*SVFLAG
Trigger: CCCAGCGAGAAAGACTGATCACAGAAGGAGTAGATA...CTGGACGGTTTGCCTCTTTTCCTTTTGCCTCAGAAGGAGTGGGTTAAAGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR TCA 90 bp TACCAGGGAAAGAGCATACAGAATTTCCTACTGGTGGAGTGGAAGCTGTTGGAAGCTAGAGAGAAGGGGTaGCCTACGTCGTTCTGGATA +
Preference number: 4 (lower is better)
Translates to: YQGKSIQNFLLVEWKLLEAREKG*PTSFWI
Trigger: TATCCAGAACGACGTAGGTCACCCCTTCTCTCTAGC...TTCCAACAGCTTCCACTCCACCAGTAGGAAATTCTGTATGCTCTTTCCCTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
CDS-3UTR GCA 90 bp CTTAAAGCAAGAAGCAAAAGTCGCAGCTATCCCGCTGTGCAGCTCTGCAGCTGTCCTTCCTCTCTACATTaGACACTTTCTCTAGTCCTG +
Preference number: 4 (lower is better)
Translates to: LKARSKSRSYPAVQLCSCPSSLH*TLSLVL
Trigger: CAGGACTAGAGAAAGTGTGCAATGTAGAGAGGAAGG...ACAGCTGCAGAGCTGCACAGCGGGATAGCTGCGACTTTTGCTTCTTGCTTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS-3UTR GCA 90 bp ACCTGCTTTAACCCACTCCTTCTGAGGCAAAAGGAAAAGAGGCAAACCGTCCAGAGACAAACTGTGCCGTaGTTGATGCCTGATAAGACG +
Preference number: 4 (lower is better)
Translates to: TCFNPLLLRQKEKRQTVQRQTVP*LMPDKT
Trigger: CGTCTTATCAGGCATCAAGCACGGCACAGTTTGTCT...CTGGACGGTTTGCCTCTTTTCCTTTTGCCTCAGAAGGAGTGGGTTAAAGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS-3UTR GCA 90 bp ACCTGCTTTAACCCACTCCTTCTGAGGCAAAAGGAAAAGAGGCAAACCGTCCAGAAAACCATTCCCATCTaGCGGCTGAGCAGAACTTTG +
Preference number: 4 (lower is better)
Translates to: TCFNPLLLRQKEKRQTVQKTIPI*RLSRTL
Trigger: CAAAGTTCTGCTCAGCCGGCAGATGGGAATGGTTTT...CTGGACGGTTTGCCTCTTTTCCTTTTGCCTCAGAAGGAGTGGGTTAAAGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR GCA 90 bp AAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTACCTCCTGGCCCTTGGATaGACAGCTATTCCTCGCGGC +
Preference number: 4 (lower is better)
Translates to: KSVAFYHHQPGLLFSLLYLLALG*TAIPRG
Trigger: GCCGCGAGGAATAGCTGTGCATCCAAGGGCCAGGAG...GTACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR GCA 90 bp CTTAAAGCAAGAAGCAAAAGTCGCAGCTATCCCGCTGTGCAGCTCTGCAGCTGTTCCAGTGATTCAATATaGATGCACACGCCACCATTG +
Preference number: 4 (lower is better)
Translates to: LKARSKSRSYPAVQLCSCSSDSI*MHTPPL
Trigger: CAATGGTGGCGTGTGCATGCATATTGAATCACTGGA...ACAGCTGCAGAGCTGCACAGCGGGATAGCTGCGACTTTTGCTTCTTGCTTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp CAAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTACAGCGTCCTCTGTCCTaGGCTGTGCACGAGGGTGTA +
Preference number: 4 (lower is better)
Translates to: QVCSILPSSAWFVIFPSVQRPLS*AVHEGV
Trigger: TACACCCTCGTGCACAGCCCAGGACAGAGGACGCTG...TACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS-3UTR CCA 90 bp AGTCTCAGGGGATTTGACAGGATCAGAAAACCCACGTCACACACAAACACATGTTCCAGAACAGTCTCCTaGCCCTTGGATGCACAGCTA +
Preference number: 4 (lower is better)
Translates to: SLRGFDRIRKPTSHTNTCSRTVS*PLDAQL
Trigger: TAGCTGTGCATCCAAGGGCCAGGAGACTGTTCTGGA...ACATGTGTTTGTGTGTGACGTGGGTTTTCTGATCCTGTCAAATCCCCTGAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
CDS-3UTR CCA 90 bp ACCTGCTTTAACCCACTCCTTCTGAGGCAAAAGGAAAAGAGGCAAACCGTCCAGTGGAGCCATCCAGATTaGCCATTTCAATCACAGACC +
Preference number: 4 (lower is better)
Translates to: TCFNPLLLRQKEKRQTVQWSHPD*PFQSQT
Trigger: GGTCTGTGATTGAAATGGCCAATCTGGATGGCTCCA...CTGGACGGTTTGCCTCTTTTCCTTTTGCCTCAGAAGGAGTGGGTTAAAGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp ACCTGCTTTAACCCACTCCTTCTGAGGCAAAAGGAAAAGAGGCAAACCGTCCAGGTACTTCAGCCTGAGTaGAGTTGCTCAGTGATGTCA +
Preference number: 4 (lower is better)
Translates to: TCFNPLLLRQKEKRQTVQVLQPE*SCSVMS
Trigger: TGACATCACTGAGCAACTCCACTCAGGCTGAAGTAC...CTGGACGGTTTGCCTCTTTTCCTTTTGCCTCAGAAGGAGTGGGTTAAAGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp AGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATATCATAGCAAAAGTAGCCTCCCTCCGTGTTaGTGCAGGCGGCATTCTCAC +
Preference number: 4 (lower is better)
Translates to: RKHNYEHGPHLAVYHSKSSLPPC*CRRHSH
Trigger: GTGAGAATGCCGCCTGCACCAACACGGAGGGAGGCT...ACTTTTGCTATGATATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
CDS-3UTR CCA 90 bp ACCTGCTTTAACCCACTCCTTCTGAGGCAAAAGGAAAAGAGGCAAACCGTCCAGCCCATTCCATCTATGTaGGGCTTCTGTCTCCATGAA +
Preference number: 4 (lower is better)
Translates to: TCFNPLLLRQKEKRQTVQPIPSM*GFCLHE
Trigger: TTCATGGAGACAGAAGCCCCACATAGATGGAATGGG...CTGGACGGTTTGCCTCTTTTCCTTTTGCCTCAGAAGGAGTGGGTTAAAGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp ACCTGCTTTAACCCACTCCTTCTGAGGCAAAAGGAAAAGAGGCAAACCGTCCAGGATCCATTAGCTGACTaGAGAGAATGCAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: TCFNPLLLRQKEKRQTVQDPLAD*RECSFS
Trigger: GGAGAAGCTGCATTCTCTCCAGTCAGCTAATGGATC...CTGGACGGTTTGCCTCTTTTCCTTTTGCCTCAGAAGGAGTGGGTTAAAGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp AAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTACCTGCCGTGGCAGGTCTaGAGCCCTTTCGTGACACGA +
Preference number: 4 (lower is better)
Translates to: KSVAFYHHQPGLLFSLLYLPWQV*SPFVTR
Trigger: TCGTGTCACGAAAGGGCTCCAGACCTGCCACGGCAG...GTACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
3UTR CAA 72 bp GTCCCAGGTATCTTCCTATATCCACATCCCCGCCACTaGGATTACAATGGCAAACTGCCATGCCTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: VPGIFLYPHPRH*DYNGKLPCLFC
Trigger: ACAAAACAGGCATGGCAGTTTGCCATTGTAATCCAAGTGGCGGGGATGTGGATATAGGAAGATACCTGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR CAA 72 bp GATCACAAGGCTGCTGAGAGTACGACTGGACAGTATTaGAGCGCAGCAAACATTGGACAGCACTGTACAACT +
Preference number: 4 (lower is better)
Translates to: DHKAAESTTGQY*SAANIGQHCTT
Trigger: AGTTGTACAGTGCTGTCCAATGTTTGCTGCGCTCAAATACTGTCCAGTCGTACTCTCAGCAGCCTTGTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
CDS-3UTR TCA 90 bp AGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATATCATAGCAAAAGTTTGAGGTGTGCTCTGTaGAGGCTGCCGGTCACCTCT +
Preference number: 4 (lower is better)
Translates to: RKHNYEHGPHLAVYHSKSLRCAL*RLPVTS
Trigger: AGAGGTGACCGGCAGCCTTCACAGAGCACACCTCAA...ACTTTTGCTATGATATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS-3UTR TCA 90 bp AGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATATCATAGCAAAAGTCCTTCGCCACTGTCCTaGACCCAGAAGAGCCGTTTG +
Preference number: 4 (lower is better)
Translates to: RKHNYEHGPHLAVYHSKSPSPLS*TQKSRL
Trigger: CAAACGGCTCTTCTGGGTTCAGGACAGTGGCGAAGG...ACTTTTGCTATGATATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS-3UTR TCA 90 bp ACCTGCTTTAACCCACTCCTTCTGAGGCAAAAGGAAAAGAGGCAAACCGTCCAGTTCATAGTTCATGCCTaGCACCATGATTTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: TCFNPLLLRQKEKRQTVQFIVHA*HHDFSH
Trigger: GTGGCTGAAATCATGGTGTCAGGCATGAACTATGAA...CTGGACGGTTTGCCTCTTTTCCTTTTGCCTCAGAAGGAGTGGGTTAAAGCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR GCA 90 bp CTTAAAGCAAGAAGCAAAAGTCGCAGCTATCCCGCTGTGCAGCTCTGCAGCTGTGGTCAATCCGAGAGATaGTCTTTCCTTGTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: LKARSKSRSYPAVQLCSCGQSER*SFLVRK
Trigger: TTTTCTCACAAGGAAAGAGCATCTCTCGGATTGACC...ACAGCTGCAGAGCTGCACAGCGGGATAGCTGCGACTTTTGCTTCTTGCTTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS-3UTR GCA 90 bp AGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATATCATAGCAAAAGTGTGCTCTGTGAAGGCTaGCGGTCACCTCTGAAGACC +
Preference number: 4 (lower is better)
Translates to: RKHNYEHGPHLAVYHSKSVLCEG*RSPLKT
Trigger: GGTCTTCAGAGGTGACCGGCAGCCTTCACAGAGCAC...ACTTTTGCTATGATATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS-3UTR GCA 90 bp GATTCCCAGTACCCACACGGCTGCACACAGATATCTGTAACTCCAGTCTCAGGGCTTCAGGGCTGTCTGTaGAAAATATATCTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: DSQYPHGCTQISVTPVSGLQGCL*KIYLAF
Trigger: GAAAGCAAGATATATTTTGCACAGACAGCCCTGAAG...CCCTGAGACTGGAGTTACAGATATCTGTGTGCAGCCGTGTGGGTACTGGGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
CDS-3UTR GCA 90 bp AAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTACCCCAAGGAGAGAGGGTaGGGTAGAGTCAGGGCAACT +
Preference number: 4 (lower is better)
Translates to: KSVAFYHHQPGLLFSLLYPKERG*GRVRAT
Trigger: AGTTGCCCTGACTCTACCGCACCCTCTCTCCTTGGG...GTACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
CDS-3UTR GCA 90 bp TCTTTTGAGTATCTTCAGTGGAACTGCTTAAAGCAAGAAGCAAAAGTCGCAGCTCCCAAGGAGAGAGGGTaGGGTAGAGTCAGGGCAACT +
Preference number: 4 (lower is better)
Translates to: SFEYLQWNCLKQEAKVAAPKERG*GRVRAT
Trigger: AGTTGCCCTGACTCTACCGCACCCTCTCTCCTTGGG...AGCTGCGACTTTTGCTTCTTGCTTTAAGCAGTTCCACTGAAGATACTCAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
CDS-3UTR CCA 90 bp ACCTGCTTTAACCCACTCCTTCTGAGGCAAAAGGAAAAGAGGCAAACCGTCCAGCAATCACAGACCTCTTaGTGTCACACCAGTACAAAG +
Preference number: 4 (lower is better)
Translates to: TCFNPLLLRQKEKRQTVQQSQTS*CHTSTK
Trigger: CTTTGTACTGGTGTGACACCAAGAGGTCTGTGATTG...CTGGACGGTTTGCCTCTTTTCCTTTTGCCTCAGAAGGAGTGGGTTAAAGCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp ATTTATCACAATTCAGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATCTGCCGTGGCAGGTCTaGAGCCCTTTCGTGACACGA +
Preference number: 4 (lower is better)
Translates to: IYHNSESTIMSMGHTWQYLPWQV*SPFVTR
Trigger: TCGTGTCACGAAAGGGCTCCAGACCTGCCACGGCAG...ATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCTGAATTGTGATAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR TCA 90 bp AAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTACAAGTGGCTGTGGTCCTaGAGCTGCACAGCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: KSVAFYHHQPGLLFSLLYKWLWS*SCTALS
Trigger: CGAAAGAGCTGTGCAGCTTCAGGACCACAGCCACTT...GTACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS-3UTR TCA 90 bp AAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTACTCCGAGACCCACAGGTaGTCCTCAAACACGGCTAGA +
Preference number: 4 (lower is better)
Translates to: KSVAFYHHQPGLLFSLLYSETHR*SSNTAR
Trigger: TCTAGCCGTGTTTGAGGATCACCTGTGGGTCTCGGA...GTACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR TCA 90 bp CAAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTAATGGACCACAACCAGTaGCGAGGGCTTCAGCATGCT +
Preference number: 4 (lower is better)
Translates to: QVCSILPSSAWFVIFPSVMDHNQ*RGLQHA
Trigger: AGCATGCTGAAGCCCTCGTCACTGGTTGTGGTCCAT...TACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR GCA 90 bp AGTCTCAGGGGATTTGACAGGATCAGAAAACCCACGTCACACACAAACACATGTAAAACCATTCCCATCTaGCGGCTGAGCAGAACTTTG +
Preference number: 4 (lower is better)
Translates to: SLRGFDRIRKPTSHTNTCKTIPI*RLSRTL
Trigger: CAAAGTTCTGCTCAGCCGGCAGATGGGAATGGTTTT...ACATGTGTTTGTGTGTGACGTGGGTTTTCTGATCCTGTCAAATCCCCTGAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
CDS-3UTR GCA 90 bp CTTAAAGCAAGAAGCAAAAGTCGCAGCTATCCCGCTGTGCAGCTCTGCAGCTGTCTTCAGGGCTGTCTGTaGAAAATATATCTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: LKARSKSRSYPAVQLCSCLQGCL*KIYLAF
Trigger: GAAAGCAAGATATATTTTGCACAGACAGCCCTGAAG...ACAGCTGCAGAGCTGCACAGCGGGATAGCTGCGACTTTTGCTTCTTGCTTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR GCA 90 bp TCTTTTGAGTATCTTCAGTGGAACTGCTTAAAGCAAGAAGCAAAAGTCGCAGCTACGAGGGCTTCAGCATaGTGCCTTGAAGACGTACCC +
Preference number: 4 (lower is better)
Translates to: SFEYLQWNCLKQEAKVAATRASA*CLEDVP
Trigger: GGGTACGTCTTCAAGGCAGCATGCTGAAGCCCTCGT...AGCTGCGACTTTTGCTTCTTGCTTTAAGCAGTTCCACTGAAGATACTCAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR GCA 90 bp ATTTATCACAATTCAGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATGCTGACTGGAGAGAATaGAGCTTCTCCGGCCCCACA +
Preference number: 4 (lower is better)
Translates to: IYHNSESTIMSMGHTWQYADWRE*SFSGPT
Trigger: TGTGGGGCCGGAGAAGCTGCATTCTCTCCAGTCAGC...ATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCTGAATTGTGATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp TCTTTTGAGTATCTTCAGTGGAACTGCTTAAAGCAAGAAGCAAAAGTCGCAGCTGTGCCCAGGCTCTCTTaGCAGATGTGTTCACAGCCT +
Preference number: 4 (lower is better)
Translates to: SFEYLQWNCLKQEAKVAAVPRLS*QMCSQP
Trigger: AGGCTGTGAACACATCTGCCAAGAGAGCCTGGGCAC...AGCTGCGACTTTTGCTTCTTGCTTTAAGCAGTTCCACTGAAGATACTCAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp ACCTGCTTTAACCCACTCCTTCTGAGGCAAAAGGAAAAGAGGCAAACCGTCCAGTTTCAGCCACTAGTGTaGAAGATTCTGTCCCATCAT +
Preference number: 4 (lower is better)
Translates to: TCFNPLLLRQKEKRQTVQFQPLV*KILSHH
Trigger: ATGATGGGACAGAATCTTCCACACTAGTGGCTGAAA...CTGGACGGTTTGCCTCTTTTCCTTTTGCCTCAGAAGGAGTGGGTTAAAGCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
3UTR CAA 72 bp TTTCTCTTGGGTGAACACAATACCTTCCATGCTTGCTaGGCTACCCCTTATTACTCACAGCTCAGGATGGGT +
Preference number: 4 (lower is better)
Translates to: FLLGEHNTFHAC*ATPYYSQLRMG
Trigger: ACCCATCCTGAGCTGTGAGTAATAAGGGGTAGCCAAGCAAGCATGGAAGGTATTGTGTTCACCCAAGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
CDS-3UTR TCA 90 bp AAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTACTTCCCATCTGCCGGCTaGGCAGAACTTTGTAGTCTG +
Preference number: 4 (lower is better)
Translates to: KSVAFYHHQPGLLFSLLYFPSAG*AELCSL
Trigger: CAGACTACAAAGTTCTGCTCAGCCGGCAGATGGGAA...GTACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR TCA 90 bp AGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATATCATAGCAAAAGTTTCCCATCTGCCGGCTaGGCAGAACTTTGTAGTCTG +
Preference number: 4 (lower is better)
Translates to: RKHNYEHGPHLAVYHSKSFPSAG*AELCSL
Trigger: CAGACTACAAAGTTCTGCTCAGCCGGCAGATGGGAA...ACTTTTGCTATGATATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR TCA 90 bp AGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATATCATAGCAAAAGTGCTAGAGAGAAGGGGTaGCCTACGTCGTTCTGGATA +
Preference number: 4 (lower is better)
Translates to: RKHNYEHGPHLAVYHSKSAREKG*PTSFWI
Trigger: TATCCAGAACGACGTAGGTCACCCCTTCTCTCTAGC...ACTTTTGCTATGATATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR TCA 90 bp AAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTACAACCCTTTCAGACACTaGCACTCAGCAGTCTCTCCG +
Preference number: 4 (lower is better)
Translates to: KSVAFYHHQPGLLFSLLYNPFRH*HSAVSP
Trigger: CGGAGAGACTGCTGAGTGTCAGTGTCTGAAAGGGTT...GTACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR TCA 90 bp CAAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTAAACCCTTTCAGACACTaGCACTCAGCAGTCTCTCCG +
Preference number: 4 (lower is better)
Translates to: QVCSILPSSAWFVIFPSVNPFRH*HSAVSP
Trigger: CGGAGAGACTGCTGAGTGTCAGTGTCTGAAAGGGTT...TACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR TCA 90 bp TCTTTTGAGTATCTTCAGTGGAACTGCTTAAAGCAAGAAGCAAAAGTCGCAGCTAACCCTTTCAGACACTaGCACTCAGCAGTCTCTCCG +
Preference number: 4 (lower is better)
Translates to: SFEYLQWNCLKQEAKVAANPFRH*HSAVSP
Trigger: CGGAGAGACTGCTGAGTGTCAGTGTCTGAAAGGGTT...AGCTGCGACTTTTGCTTCTTGCTTTAAGCAGTTCCACTGAAGATACTCAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR GCA 90 bp AGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATATCATAGCAAAAGTAGGGCTTCAGCATGCTaGCTTGAAGACGTACCCTGT +
Preference number: 4 (lower is better)
Translates to: RKHNYEHGPHLAVYHSKSRASAC*LEDVPC
Trigger: ACAGGGTACGTCTTCAAGGCAGCATGCTGAAGCCCT...ACTTTTGCTATGATATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR GCA 90 bp CAAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTAAGGGCTTCAGCATGCTaGCTTGAAGACGTACCCTGT +
Preference number: 4 (lower is better)
Translates to: QVCSILPSSAWFVIFPSVRASAC*LEDVPC
Trigger: ACAGGGTACGTCTTCAAGGCAGCATGCTGAAGCCCT...TACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR GCA 90 bp TCTTTTGAGTATCTTCAGTGGAACTGCTTAAAGCAAGAAGCAAAAGTCGCAGCTAGCCTTCTGAGCATCTaGAGACGTAGCCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: SFEYLQWNCLKQEAKVAASLLSI*RRSHLQ
Trigger: CTGAAGGTGGCTACGTCTGCAGATGCTCAGAAGGCT...AGCTGCGACTTTTGCTTCTTGCTTTAAGCAGTTCCACTGAAGATACTCAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR GCA 90 bp AGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATATCATAGCAAAAGTGCCAGCATCTACTACTaGACCATTCGTACCATCCGC +
Preference number: 4 (lower is better)
Translates to: RKHNYEHGPHLAVYHSKSASIYY*TIRTIR
Trigger: GCGGATGGTACGAATGGTGCAGTAGTAGATGCTGGC...ACTTTTGCTATGATATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR GCA 90 bp TCTTTTGAGTATCTTCAGTGGAACTGCTTAAAGCAAGAAGCAAAAGTCGCAGCTAGCAGCTTTGCCCTGTaGCCATTCCATCTATGTGGG +
Preference number: 4 (lower is better)
Translates to: SFEYLQWNCLKQEAKVAASSFAL*PFHLCG
Trigger: CCCACATAGATGGAATGGGCACAGGGCAAAGCTGCT...AGCTGCGACTTTTGCTTCTTGCTTTAAGCAGTTCCACTGAAGATACTCAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR GCA 90 bp AAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTACAGCAGCTTTGCCCTGTaGCCATTCCATCTATGTGGG +
Preference number: 4 (lower is better)
Translates to: KSVAFYHHQPGLLFSLLYSSFAL*PFHLCG
Trigger: CCCACATAGATGGAATGGGCACAGGGCAAAGCTGCT...GTACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR GCA 90 bp CAAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTAAGCAGCTTTGCCCTGTaGCCATTCCATCTATGTGGG +
Preference number: 4 (lower is better)
Translates to: QVCSILPSSAWFVIFPSVSSFAL*PFHLCG
Trigger: CCCACATAGATGGAATGGGCACAGGGCAAAGCTGCT...TACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR GCA 90 bp AGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATATCATAGCAAAAGTGGAATCCAGCAGCTTTaGCCTGTGCCCATTCCATCT +
Preference number: 4 (lower is better)
Translates to: RKHNYEHGPHLAVYHSKSGIQQL*PVPIPS
Trigger: AGATGGAATGGGCACAGGGCAAAGCTGCTGGATTCC...ACTTTTGCTATGATATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR GCA 90 bp ATTTATCACAATTCAGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATCCCAAGGAGAGAGGGTaGGGTAGAGTCGAAACAGGA +
Preference number: 4 (lower is better)
Translates to: IYHNSESTIMSMGHTWQYPKERG*GRVETG
Trigger: TCCTGTTTCGACTCTACCGCACCCTCTCTCCTTGGG...ATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCTGAATTGTGATAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp ATTTATCACAATTCAGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATCAGTCTCCTGGCCCTTaGATGCACAGCTATTCCTCG +
Preference number: 4 (lower is better)
Translates to: IYHNSESTIMSMGHTWQYQSPGP*MHSYSS
Trigger: CGAGGAATAGCTGTGCATCCAAGGGCCAGGAGACTG...ATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCTGAATTGTGATAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp AGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATATCATAGCAAAAGTTCCAGAACAGTCTCCTaGCCCTTGGATGCACAGCTA +
Preference number: 4 (lower is better)
Translates to: RKHNYEHGPHLAVYHSKSSRTVS*PLDAQL
Trigger: TAGCTGTGCATCCAAGGGCCAGGAGACTGTTCTGGA...ACTTTTGCTATGATATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp AAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTACTCCAGAACAGTCTCCTaGCCCTTGGATGCACAGCTA +
Preference number: 4 (lower is better)
Translates to: KSVAFYHHQPGLLFSLLYSRTVS*PLDAQL
Trigger: TAGCTGTGCATCCAAGGGCCAGGAGACTGTTCTGGA...GTACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp AACTCACAGTTCATGCCTGACACCATGATTTCAGCCACTAGTGTGGAAGATTCTTGGAGCCATCCAGATTaGCCATTTCAATCACAGACC +
Preference number: 4 (lower is better)
Translates to: NSQFMPDTMISATSVEDSWSHPD*PFQSQT
Trigger: GGTCTGTGATTGAAATGGCCAATCTGGATGGCTCCA...AGAATCTTCCACACTAGTGGCTGAAATCATGGTGTCAGGCATGAACTGTGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
CDS-3UTR CCA 90 bp TCTTTTGAGTATCTTCAGTGGAACTGCTTAAAGCAAGAAGCAAAAGTCGCAGCTGCAGGGATCTGCACCTaGTTTTGCCAATGGATGGAC +
Preference number: 4 (lower is better)
Translates to: SFEYLQWNCLKQEAKVAAAGICT*FCQWMD
Trigger: GTCCATCCATTGGCAAAACCAGGTGCAGATCCCTGC...AGCTGCGACTTTTGCTTCTTGCTTTAAGCAGTTCCACTGAAGATACTCAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp AGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATATCATAGCAAAAGTGCAGGGATCTGCACCTaGTTTTGCCAATGGATGGAC +
Preference number: 4 (lower is better)
Translates to: RKHNYEHGPHLAVYHSKSAGICT*FCQWMD
Trigger: GTCCATCCATTGGCAAAACCAGGTGCAGATCCCTGC...ACTTTTGCTATGATATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp ATTTATCACAATTCAGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATGTGCCCAGGCTCTCTTaGCAGATGTGTTCACAGCCT +
Preference number: 4 (lower is better)
Translates to: IYHNSESTIMSMGHTWQYVPRLS*QMCSQP
Trigger: AGGCTGTGAACACATCTGCCAAGAGAGCCTGGGCAC...ATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCTGAATTGTGATAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
3UTR CAA 72 bp GGATGCAGGCAAAGGCTCTGCTGTCTTATATTGTCTTaGGGGCTAAGTGAATACAAAACCAAACGCAGACGA +
Preference number: 4 (lower is better)
Translates to: GCRQRLCCLILS*GLSEYKTKRRR
Trigger: TCGTCTGCGTTTGGTTTTGTATTCACTTAGCCCCAAAGACAATATAAGACAGCAGAGCCTTTGCCTGCATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR CAA 72 bp TGCACACAGATATCTGTAACTCCAGTCTCAGGGGATTaGACAGGATCAGAAAACCCACGTCACACACAAACA +
Preference number: 4 (lower is better)
Translates to: CTQISVTPVSGD*TGSENPRHTQT
Trigger: TGTTTGTGTGTGACGTGGGTTTTCTGATCCTGTCAAATCCCCTGAGACTGGAGTTACAGATATCTGTGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
CDS-3UTR TCA 90 bp ATTTATCACAATTCAGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATGCTAGAGAGAAGGGGTaGCCTACGTCGTTCTGGATA +
Preference number: 4 (lower is better)
Translates to: IYHNSESTIMSMGHTWQYAREKG*PTSFWI
Trigger: TATCCAGAACGACGTAGGTCACCCCTTCTCTCTAGC...ATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCTGAATTGTGATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR TCA 90 bp TCTTTTGAGTATCTTCAGTGGAACTGCTTAAAGCAAGAAGCAAAAGTCGCAGCTTTCAGCATGCTGCCTTaGAGACGTACCCTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: SFEYLQWNCLKQEAKVAAFSMLP*RRTLFW
Trigger: CCAAAACAGGGTACGTCTTCAAGGCAGCATGCTGAA...AGCTGCGACTTTTGCTTCTTGCTTTAAGCAGTTCCACTGAAGATACTCAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR TCA 90 bp CAAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTATCATGCCTGACACCATaGTTTCAGCCACTAGTGTGG +
Preference number: 4 (lower is better)
Translates to: QVCSILPSSAWFVIFPSVSCLTP*FQPLVW
Trigger: CCACACTAGTGGCTGAAATCATGGTGTCAGGCATGA...TACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR GCA 90 bp ATTTATCACAATTCAGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATAACACCTTTGAGGTGTaGTCTGTGAAGGCTGCCGGT +
Preference number: 4 (lower is better)
Translates to: IYHNSESTIMSMGHTWQYNTFEV*SVKAAG
Trigger: ACCGGCAGCCTTCACAGAGCACACCTCAAAGGTGTT...ATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCTGAATTGTGATAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS-3UTR GCA 90 bp AGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATATCATAGCAAAAGTGCGATGAACAACCAGTaGAAGTCTTCCCATCTCTCC +
Preference number: 4 (lower is better)
Translates to: RKHNYEHGPHLAVYHSKSAMNNQ*KSSHLS
Trigger: GGAGAGATGGGAAGACTTGCACTGGTTGTTCATCGC...ACTTTTGCTATGATATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS-3UTR GCA 90 bp CTTAAAGCAAGAAGCAAAAGTCGCAGCTATCCCGCTGTGCAGCTCTGCAGCTGTGTGCAAAATATATCTTaGTTTCCACAGGGTCATAAT +
Preference number: 4 (lower is better)
Translates to: LKARSKSRSYPAVQLCSCVQNIS*FPQGHN
Trigger: ATTATGACCCTGTGGAAAGCAAGATATATTTTGCAC...ACAGCTGCAGAGCTGCACAGCGGGATAGCTGCGACTTTTGCTTCTTGCTTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR GCA 90 bp TCTTTTGAGTATCTTCAGTGGAACTGCTTAAAGCAAGAAGCAAAAGTCGCAGCTCAGCCTGAGTGGAGTTaGTCAGTGATGTCACCTCTT +
Preference number: 4 (lower is better)
Translates to: SFEYLQWNCLKQEAKVAAQPEWS*SVMSPL
Trigger: AAGAGGTGACATCACTGAGCAACTCCACTCAGGCTG...AGCTGCGACTTTTGCTTCTTGCTTTAAGCAGTTCCACTGAAGATACTCAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR GCA 90 bp AGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATATCATAGCAAAAGTCAGCCTGAGTGGAGTTaGTCAGTGATGTCACCTCTT +
Preference number: 4 (lower is better)
Translates to: RKHNYEHGPHLAVYHSKSQPEWS*SVMSPL
Trigger: AAGAGGTGACATCACTGAGCAACTCCACTCAGGCTG...ACTTTTGCTATGATATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR GCA 90 bp ATTTATCACAATTCAGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATAGCCTTCTGAGCATCTaGAGACGTAGCCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: IYHNSESTIMSMGHTWQYSLLSI*RRSHLQ
Trigger: CTGAAGGTGGCTACGTCTGCAGATGCTCAGAAGGCT...ATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCTGAATTGTGATAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR GCA 90 bp ATTTATCACAATTCAGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATGCCAGCATCTACTACTaGACCATTCGTACCATCCGC +
Preference number: 4 (lower is better)
Translates to: IYHNSESTIMSMGHTWQYASIYY*TIRTIR
Trigger: GCGGATGGTACGAATGGTGCAGTAGTAGATGCTGGC...ATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCTGAATTGTGATAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR GCA 90 bp ATTTATCACAATTCAGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATGGAATCCAGCAGCTTTaGCCTGTGCCCATTCCATCT +
Preference number: 4 (lower is better)
Translates to: IYHNSESTIMSMGHTWQYGIQQL*PVPIPS
Trigger: AGATGGAATGGGCACAGGGCAAAGCTGCTGGATTCC...ATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCTGAATTGTGATAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp TCTTTTGAGTATCTTCAGTGGAACTGCTTAAAGCAAGAAGCAAAAGTCGCAGCTTCCCCGTGTGTTTGTTaGCTATCCAAATCGCCTTGC +
Preference number: 4 (lower is better)
Translates to: SFEYLQWNCLKQEAKVAASPCVC*LSKSPC
Trigger: GCAAGGCGATTTGGATAGCCAACAAACACACGGGGA...AGCTGCGACTTTTGCTTCTTGCTTTAAGCAGTTCCACTGAAGATACTCAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS-3UTR CCA 90 bp CAAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTAGCAGAACAAATCCTGTaGGGCATGTGCAGTGATAGG +
Preference number: 4 (lower is better)
Translates to: QVCSILPSSAWFVIFPSVAEQIL*GMCSDR
Trigger: CCTATCACTGCACATGCCCCACAGGATTTGTTCTGC...TACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS-3UTR CCA 90 bp AACTCACAGTTCATGCCTGACACCATGATTTCAGCCACTAGTGTGGAAGATTCTCAATCACAGACCTCTTaGTGTCACACCAGTACAAAG +
Preference number: 4 (lower is better)
Translates to: NSQFMPDTMISATSVEDSQSQTS*CHTSTK
Trigger: CTTTGTACTGGTGTGACACCAAGAGGTCTGTGATTG...AGAATCTTCCACACTAGTGGCTGAAATCATGGTGTCAGGCATGAACTGTGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
CDS-3UTR CCA 90 bp TCTTTTGAGTATCTTCAGTGGAACTGCTTAAAGCAAGAAGCAAAAGTCGCAGCTCACCCTTATTACCGATaGGATAGCCCAATCCGAGAC +
Preference number: 4 (lower is better)
Translates to: SFEYLQWNCLKQEAKVAAHPYYR*DSPIRD
Trigger: GTCTCGGATTGGGCTATCCCATCGGTAATAAGGGTG...AGCTGCGACTTTTGCTTCTTGCTTTAAGCAGTTCCACTGAAGATACTCAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp TCTTTTGAGTATCTTCAGTGGAACTGCTTAAAGCAAGAAGCAAAAGTCGCAGCTAGACGTACCCTGTTTTaGCCAGTCCTCTTGTTCACC +
Preference number: 4 (lower is better)
Translates to: SFEYLQWNCLKQEAKVAARRTLF*PVLLFT
Trigger: GGTGAACAAGAGGACTGGCCAAAACAGGGTACGTCT...AGCTGCGACTTTTGCTTCTTGCTTTAAGCAGTTCCACTGAAGATACTCAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp AGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATATCATAGCAAAAGTGGTTTTGCCAATGGATaGACCACAACCAGTGACGAG +
Preference number: 4 (lower is better)
Translates to: RKHNYEHGPHLAVYHSKSGFANG*TTTSDE
Trigger: CTCGTCACTGGTTGTGGTCCATCCATTGGCAAAACC...ACTTTTGCTATGATATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp CAAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTATTTCGGTCCAAATGGTaGCCATCTTCCCCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: QVCSILPSSAWFVIFPSVFRSKW*PSSPRR
Trigger: TCTCCTTGGGGAAGATGGCCACCATTTGGACCGAAA...TACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
3UTR CAA 72 bp AGCATACAGAATTTCCTACTGGTGGAGTGGAAGCTGTaGGAACAAAAGCTATCTGGGAGAACTCACAGTTCA +
Preference number: 4 (lower is better)
Translates to: SIQNFLLVEWKL*EQKLSGRTHSS
Trigger: TGAACTGTGAGTTCTCCCAGATAGCTTTTGTTCCAACAGCTTCCACTCCACCAGTAGGAAATTCTGTATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
3UTR CAA 72 bp AATGCAGGATGCAGGCAAAGGCTCTGCTGTCTTATATaGTCTTTGGGGCTAAGTGAATACAAAACCAAACGC +
Preference number: 4 (lower is better)
Translates to: NAGCRQRLCCLI*SLGLSEYKTKR
Trigger: GCGTTTGGTTTTGTATTCACTTAGCCCCAAAGACAATATAAGACAGCAGAGCCTTTGCCTGCATCCTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
CDS-3UTR TCA 90 bp CAAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTAACCATTGTCAGGCGATaGACAACCAGTGCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: QVCSILPSSAWFVIFPSVTIVRR*TTSASL
Trigger: AAGACTTGCACTGGTTGTTCATCGCCTGACAATGGT...TACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS-3UTR TCA 90 bp AAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTACTATCTACTCCTTCTGTaGTCAGTCTTTCTCGCTGGG +
Preference number: 4 (lower is better)
Translates to: KSVAFYHHQPGLLFSLLYYLLLL*SVFLAG
Trigger: CCCAGCGAGAAAGACTGATCACAGAAGGAGTAGATA...GTACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR TCA 90 bp ATTTATCACAATTCAGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATTTCAGCATGCTGCCTTaGAGACGTACCCTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: IYHNSESTIMSMGHTWQYFSMLP*RRTLFW
Trigger: CCAAAACAGGGTACGTCTTCAAGGCAGCATGCTGAA...ATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCTGAATTGTGATAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp AGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATATCATAGCAAAAGTGTCACAAAGGATGGATaGAGGTTAATCCTGACCGTG +
Preference number: 4 (lower is better)
Translates to: RKHNYEHGPHLAVYHSKSVTKDG*RLILTV
Trigger: CACGGTCAGGATTAACCTCCATCCATCCTTTGTGAC...ACTTTTGCTATGATATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS-3UTR CCA 90 bp AAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTACAGAGGAAGACAGATCTaGCTGCATCCACCATTGTCA +
Preference number: 4 (lower is better)
Translates to: KSVAFYHHQPGLLFSLLYRGRQI*LHPPLS
Trigger: TGACAATGGTGGATGCAGCCAGATCTGTCTTCCTCT...GTACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS-3UTR CCA 90 bp TCTTTTGAGTATCTTCAGTGGAACTGCTTAAAGCAAGAAGCAAAAGTCGCAGCTTGGAGCCATCCAGATTaGCCATTTCAATCACAGACC +
Preference number: 4 (lower is better)
Translates to: SFEYLQWNCLKQEAKVAAWSHPD*PFQSQT
Trigger: GGTCTGTGATTGAAATGGCCAATCTGGATGGCTCCA...AGCTGCGACTTTTGCTTCTTGCTTTAAGCAGTTCCACTGAAGATACTCAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp ATTTATCACAATTCAGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATCACCCTTATTACCGATaGGATAGCCCAATCCGAGAC +
Preference number: 4 (lower is better)
Translates to: IYHNSESTIMSMGHTWQYHPYYR*DSPIRD
Trigger: GTCTCGGATTGGGCTATCCCATCGGTAATAAGGGTG...ATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCTGAATTGTGATAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp ATTTATCACAATTCAGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATAGACGTACCCTGTTTTaGCCAGTCCTCTTGTTCACC +
Preference number: 4 (lower is better)
Translates to: IYHNSESTIMSMGHTWQYRRTLF*PVLLFT
Trigger: GGTGAACAAGAGGACTGGCCAAAACAGGGTACGTCT...ATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCTGAATTGTGATAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp CAAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTAGTACTTCAGCCTGAGTaGAGTTGCTCAGTGATGTCA +
Preference number: 4 (lower is better)
Translates to: QVCSILPSSAWFVIFPSVVLQPE*SCSVMS
Trigger: TGACATCACTGAGCAACTCCACTCAGGCTGAAGTAC...TACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp AGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATATCATAGCAAAAGTCCATTCTTGGGGTCTTaGTGTTTCTCTAGGACCACA +
Preference number: 4 (lower is better)
Translates to: RKHNYEHGPHLAVYHSKSPFLGS*CFSRTT
Trigger: TGTGGTCCTAGAGAAACACCAAGACCCCAAGAATGG...ACTTTTGCTATGATATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp TCTTTTGAGTATCTTCAGTGGAACTGCTTAAAGCAAGAAGCAAAAGTCGCAGCTCCATTCTTGGGGTCTTaGTGTTTCTCTAGGACCACA +
Preference number: 4 (lower is better)
Translates to: SFEYLQWNCLKQEAKVAAPFLGS*CFSRTT
Trigger: TGTGGTCCTAGAGAAACACCAAGACCCCAAGAATGG...AGCTGCGACTTTTGCTTCTTGCTTTAAGCAGTTCCACTGAAGATACTCAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp AAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTACGATCCATTAGCTGACTaGAGAGAATGCAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: KSVAFYHHQPGLLFSLLYDPLAD*RECSFS
Trigger: GGAGAAGCTGCATTCTCTCCAGTCAGCTAATGGATC...GTACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
3UTR CAA 72 bp GTAGGGTGGGGAATACTTAAGTCTCTTTTAGCCTGCTaGTCACCCATTTCGAATTATCCCTCAAATGGTTCA +
Preference number: 4 (lower is better)
Translates to: VGWGILKSLLAC*SPISNYPSNGS
Trigger: TGAACCATTTGAGGGATAATTCGAAATGGGTGACAAGCAGGCTAAAAGAGACTTAAGTATTCCCCACCCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
CDS-3UTR TCA 90 bp ATTTATCACAATTCAGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATACCACCAATTGCTGGTaGTTTGTTCCATCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: IYHNSESTIMSMGHTWQYTTNCW*FVPSGS
Trigger: TGACCCAGATGGAACAAATCACCAGCAATTGGTGGT...ATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCTGAATTGTGATAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS-3UTR TCA 90 bp CAAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTACTTGCTTTTCAACACTaGGTAGAAGATCCGATCACC +
Preference number: 4 (lower is better)
Translates to: QVCSILPSSAWFVIFPSVLAFQH*VEDPIT
Trigger: GGTGATCGGATCTTCTACTCAGTGTTGAAAAGCAAG...TACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS-3UTR TCA 90 bp AAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTACCAGGAAACAAGTTCGTaGCATTGTTTCCCATCAGGA +
Preference number: 4 (lower is better)
Translates to: KSVAFYHHQPGLLFSLLYQETSS*HCFPSG
Trigger: TCCTGATGGGAAACAATGTCACGAACTTGTTTCCTG...GTACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS-3UTR TCA 90 bp CAAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTATTCATAGTTCATGCCTaGCACCATGATTTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: QVCSILPSSAWFVIFPSVFIVHA*HHDFSH
Trigger: GTGGCTGAAATCATGGTGTCAGGCATGAACTATGAA...TACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR GCA 90 bp TCTTTTGAGTATCTTCAGTGGAACTGCTTAAAGCAAGAAGCAAAAGTCGCAGCTTCTGTTCCATCAAAATaGATGTGTCGGATGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SFEYLQWNCLKQEAKVAASVPSK*MCRMSW
Trigger: CCAGGACATCCGACACATGCATTTTGATGGAACAGA...AGCTGCGACTTTTGCTTCTTGCTTTAAGCAGTTCCACTGAAGATACTCAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS-3UTR GCA 90 bp TCCTTGACCCCCTACACCATCAATGTACTCTCTGTCATGTTTCTTCGTCTGCCAGTGCAAAATATATCTTaGTTTCCACAGGGTCATAAT +
Preference number: 4 (lower is better)
Translates to: SLTPYTINVLSVMFLRLPVQNIS*FPQGHN
Trigger: ATTATGACCCTGTGGAAAGCAAGATATATTTTGCAC...TGGCAGACGAAGAAACATGACAGAGAGTACATTGATGGTGTAGGGGGTCAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
CDS-3UTR CCA 90 bp ATTTATCACAATTCAGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATATCAGTCTTTCTCGCTaGGACCCATCCATATTAGCC +
Preference number: 4 (lower is better)
Translates to: IYHNSESTIMSMGHTWQYISLSR*DPSILA
Trigger: GGCTAATATGGATGGGTCCCAGCGAGAAAGACTGAT...ATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCTGAATTGTGATAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp AAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTACCAATCACAGACCTCTTaGTGTCACACCAGTACAAAG +
Preference number: 4 (lower is better)
Translates to: KSVAFYHHQPGLLFSLLYQSQTS*CHTSTK
Trigger: CTTTGTACTGGTGTGACACCAAGAGGTCTGTGATTG...GTACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp CAAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTACAATCACAGACCTCTTaGTGTCACACCAGTACAAAG +
Preference number: 4 (lower is better)
Translates to: QVCSILPSSAWFVIFPSVQSQTS*CHTSTK
Trigger: CTTTGTACTGGTGTGACACCAAGAGGTCTGTGATTG...TACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp ATTTATCACAATTCAGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATGCAGACTCCCATTCTTaGGGTCTTGGTGTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: IYHNSESTIMSMGHTWQYADSHS*GLGVSL
Trigger: TAGAGAAACACCAAGACCCCAAGAATGGGAGTCTGC...ATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCTGAATTGTGATAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
3UTR CAA 72 bp AAAGTGGTCTCTAGCCCACTAACCCTGATGCCTTATTaGATTAAACTTCTGGTTCTCACATTAAGCTGTGAC +
Preference number: 4 (lower is better)
Translates to: KVVSSPLTLMPY*IKLLVLTLSCD
Trigger: GTCACAGCTTAATGTGAGAACCAGAAGTTTAATCAAATAAGGCATCAGGGTTAGTGGGCTAGAGACCACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
CDS-3UTR TCA 90 bp AGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATATCATAGCAAAAGTATCAGCATTTTCACCTaGCAGGATTGGATAATCCTG +
Preference number: 4 (lower is better)
Translates to: RKHNYEHGPHLAVYHSKSISIFT*QDWIIL
Trigger: CAGGATTATCCAATCCTGTCAGGTGAAAATGCTGAT...ACTTTTGCTATGATATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR TCA 90 bp TCTTTTGAGTATCTTCAGTGGAACTGCTTAAAGCAAGAAGCAAAAGTCGCAGCTATCAGCATTTTCACCTaGCAGGATTGGATAATCCTG +
Preference number: 4 (lower is better)
Translates to: SFEYLQWNCLKQEAKVAAISIFT*QDWIIL
Trigger: CAGGATTATCCAATCCTGTCAGGTGAAAATGCTGAT...AGCTGCGACTTTTGCTTCTTGCTTTAAGCAGTTCCACTGAAGATACTCAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp AGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATATCATAGCAAAAGTTTTCAGCCACTAGTGTaGAAGATTCTGTCCCATCAT +
Preference number: 4 (lower is better)
Translates to: RKHNYEHGPHLAVYHSKSFQPLV*KILSHH
Trigger: ATGATGGGACAGAATCTTCCACACTAGTGGCTGAAA...ACTTTTGCTATGATATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR TCA 90 bp ATTTATCACAATTCAGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATAGATTCTCTCCTGGATaGTTATTCGATGATGCTTCC +
Preference number: 4 (lower is better)
Translates to: IYHNSESTIMSMGHTWQYRFSPG*LFDDAS
Trigger: GGAAGCATCATCGAATAATCATCCAGGAGAGAATCT...ATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCTGAATTGTGATAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR TCA 90 bp CAAAGGCTCTGCTGTCTTATATTGTCTTTGGGGCTAAGTGAATACAAAACCAAAAGATTCTCTCCTGGATaGTTATTCGATGATGCTTCC +
Preference number: 4 (lower is better)
Translates to: QRLCCLILSLGLSEYKTKRFSPG*LFDDAS
Trigger: GGAAGCATCATCGAATAATCATCCAGGAGAGAATCT...TTTGGTTTTGTATTCACTTAGCCCCAAAGACAATATAAGACAGCAGAGCCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
CDS-3UTR GCA 90 bp AAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTACCTATCCAAATCGCCTTaGTTTTCAACACTGAGTAGA +
Preference number: 4 (lower is better)
Translates to: KSVAFYHHQPGLLFSLLYLSKSP*FSTLSR
Trigger: TCTACTCAGTGTTGAAAAGCAAGGCGATTTGGATAG...GTACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS-3UTR GCA 90 bp AAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTACCTTCAGGGCTGTCTGTaGAAAATATATCTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: KSVAFYHHQPGLLFSLLYLQGCL*KIYLAF
Trigger: GAAAGCAAGATATATTTTGCACAGACAGCCCTGAAG...GTACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CCA 90 bp ATTTATCACAATTCAGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATTTTCAGCCACTAGTGTaGAAGATTCTGTCCCATCAT +
Preference number: 4 (lower is better)
Translates to: IYHNSESTIMSMGHTWQYFQPLV*KILSHH
Trigger: ATGATGGGACAGAATCTTCCACACTAGTGGCTGAAA...ATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCTGAATTGTGATAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
3UTR CAA 72 bp CAATTCAGAAAGCACAATTATGAGCATGGGCCACACTaGGCAGTATATCATAGCAAAAGTTATAGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: QFRKHNYEHGPH*AVYHSKSYSVP
Trigger: TGGAACACTATAACTTTTGCTATGATATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCTGAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR GCA 90 bp TCTTTTGAGTATCTTCAGTGGAACTGCTTAAAGCAAGAAGCAAAAGTCGCAGCTGTGCAAAATATATCTTaGTTTCCACAGGGTCATAAT +
Preference number: 4 (lower is better)
Translates to: SFEYLQWNCLKQEAKVAAVQNIS*FPQGHN
Trigger: ATTATGACCCTGTGGAAAGCAAGATATATTTTGCAC...AGCTGCGACTTTTGCTTCTTGCTTTAAGCAGTTCCACTGAAGATACTCAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR GCA 90 bp AGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATATCATAGCAAAAGTGTGCAAAATATATCTTaGTTTCCACAGGGTCATAAT +
Preference number: 4 (lower is better)
Translates to: RKHNYEHGPHLAVYHSKSVQNIS*FPQGHN
Trigger: ATTATGACCCTGTGGAAAGCAAGATATATTTTGCAC...ACTTTTGCTATGATATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS GCA 90 bp TGCGGTAGAGTCAGGGCAACTCAGTCCGGGCGAGGATGGGCGGCCTaGGCAGGTGCAGTTGTAGCCTCCCTCCGTGTTGGTGCAGGCGGC +
Preference number: 5 (lower is better)
Translates to: CGRVRATQSGRGWAA*AGAVVASLRVGAGG
Trigger: GCCGCCTGCACCAACACGGAGGGAGGCTACAACTGCACCTGCGCAGGCCGCCCATCCTCGCCCGGACTGAGTTGCCCTGACTCTACCGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
CDS GCA 90 bp AGTCAGGGCAACTCAGTCCGGGCGAGGATGGGCGGCCTGCGCAGGTaGAGTTGTAGCCTCCCTCCGTGTTGGTGCAGGCGGCATTCTCAC +
Preference number: 5 (lower is better)
Translates to: SQGNSVRARMGGLRR*SCSLPPCWCRRHSH
Trigger: GTGAGAATGCCGCCTGCACCAACACGGAGGGAGGCTACAACTGCACCTGCGCAGGCCGCCCATCCTCGCCCGGACTGAGTTGCCCTGACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
CDS CCA 90 bp GAGAGAGGGTGCGGTAGAGTCAGGGCAACTCAGTCCGGGCGAGGATaGGCGGCCTGCGCAGGTGCAGTTGTAGCCTCCCTCCGTGTTGGT +
Preference number: 5 (lower is better)
Translates to: ERGCGRVRATQSGRG*AACAGAVVASLRVG
Trigger: ACCAACACGGAGGGAGGCTACAACTGCACCTGCGCAGGCCGCCCATCCTCGCCCGGACTGAGTTGCCCTGACTCTACCGCACCCTCTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
CDS GCA 90 bp GGACCACAAACCAAGGTTGGGGACAAGAAGCCACAGCTGCCCCGCTaGTGCTGTTGGGTCCGCTGCTGCTCACACTTCCGCTTGGCTCAT +
Preference number: 5 (lower is better)
Translates to: GPQTKVGDKKPQLPR*CCWVRCCSHFRLAH
Trigger: ATGAGCCAAGCGGAAGTGTGAGCAGCAGCGGACCCAACAGCAGCAGCGGGGCAGCTGTGGCTTCTTGTCCCCAACCTTGGTTTGTGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS CCA 90 bp ACCAAGGTTGGGGACAAGAAGCCACAGCTGCCCCGCTGCTGCTGTTaGGTCCGCTGCTGCTCACACTTCCGCTTGGCTCATCACAAGGGT +
Preference number: 5 (lower is better)
Translates to: TKVGDKKPQLPRCCC*VRCCSHFRLAHHKG
Trigger: ACCCTTGTGATGAGCCAAGCGGAAGTGTGAGCAGCAGCGGACCCAACAGCAGCAGCGGGGCAGCTGTGGCTTCTTGTCCCCAACCTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS TCA 90 bp CTGCCGTGGCAGGTCTGGAGCCCTTTCGTGACACGATCCATTAGCTaGCTGGAGAGAATGCAGCTTCTCCGGCCCCACAGGTCTGTAGGA +
Preference number: 5 (lower is better)
Translates to: LPWQVWSPFVTRSIS*LERMQLLRPHRSVG
Trigger: TCCTACAGACCTGTGGGGCCGGAGAAGCTGCATTCTCTCCAGTCAGCTAATGGATCGTGTCACGAAAGGGCTCCAGACCTGCCACGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CAA 90 bp AGCTATCCCGCTGTGCAGCTCTGCAGCTGTGCAGCTATCTTCAGGACCCTGAGCTGTGCCCAGGCTCTCTaGGCAGATGTGTTCACAGCC +
Preference number: 5 (lower is better)
Translates to: SYPAVQLCSCAAIFRTLSCAQAL*ADVFTA
Trigger: GGCTGTGAACACATCTGCCAAGAGAGCCTGGGCACA...GCTCAGGGTCCTGAAGATAGCTGCACAGCTGCAGAGCTGCACAGCGGGATAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS CCA 90 bp CCATTCTTGGGGTCTTGGTGTTTCTCTAGGACCACAAACCAAGGTTaGGGACAAGAAGCCACAGCTGCCCCGCTGCTGCTGTTGGGTCCG +
Preference number: 5 (lower is better)
Translates to: PFLGSWCFSRTTNQG*GQEATAAPLLLLGP
Trigger: CGGACCCAACAGCAGCAGCGGGGCAGCTGTGGCTTCTTGTCCCCAACCTTGGTTTGTGGTCCTAGAGAAACACCAAGACCCCAAGAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CAA 90 bp AGCTATCCCGCTGTGCAGCTCTGCAGCTGTGCAGCTATCTTCAGGACCCTGAGCGACCACAAACCAAGGTaGGGGACAAGAAGCCACAGC +
Preference number: 5 (lower is better)
Translates to: SYPAVQLCSCAAIFRTLSDHKPR*GTRSHS
Trigger: GCTGTGGCTTCTTGTCCCCAACCTTGGTTTGTGGTC...GCTCAGGGTCCTGAAGATAGCTGCACAGCTGCAGAGCTGCACAGCGGGATAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS TCA 90 bp GGTTCCAGTAGATTGGAGCTGGCTATCAGCACCCGGTCGGAACCTTaGAGGGAAGCGCTTTCAATCCGTGGAGACATCCCTACGTCCGTC +
Preference number: 5 (lower is better)
Translates to: GSSRLELAISTRSEP*REALSIRGDIPTSV
Trigger: GACGGACGTAGGGATGTCTCCACGGATTGAAAGCGCTTCCCTTCAAGGTTCCGACCGGGTGCTGATAGCCAGCTCCAATCTACTGGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000197713.2
ENSMUST00000199615.5
CDS GCA 90 bp GTGCCCATTCCATCTATGTGGGGCTTCTGTCTCCATGAAGTCAGATaGACTGACCCGAGCTGCAGGGAGGGAGACAGGCCAGCATCTACT +
Preference number: 5 (lower is better)
Translates to: VPIPSMWGFCLHEVR*TDPSCREGDRPAST
Trigger: AGTAGATGCTGGCCTGTCTCCCTCCCTGCAGCTCGGGTCAGTGCATCTGACTTCATGGAGACAGAAGCCCCACATAGATGGAATGGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS CCA 90 bp GATGGTGGAATCCAGCAGCTTTGCCCTGTGCCCATTCCATCTATGTaGGGCTTCTGTCTCCATGAAGTCAGATGCACTGACCCGAGCTGC +
Preference number: 5 (lower is better)
Translates to: DGGIQQLCPVPIPSM*GFCLHEVRCTDPSC
Trigger: GCAGCTCGGGTCAGTGCATCTGACTTCATGGAGACAGAAGCCCCACATAGATGGAATGGGCACAGGGCAAAGCTGCTGGATTCCACCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CAA 90 bp AGCTATCCCGCTGTGCAGCTCTGCAGCTGTGCAGCTATCTTCAGGACCCTGAGCAAGACGTACCCTGTTTaGGCCAGTCCTCTTGTTCAC +
Preference number: 5 (lower is better)
Translates to: SYPAVQLCSCAAIFRTLSKTYPV*ASPLVH
Trigger: GTGAACAAGAGGACTGGCCAAAACAGGGTACGTCTT...GCTCAGGGTCCTGAAGATAGCTGCACAGCTGCAGAGCTGCACAGCGGGATAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS TCA 90 bp GCAGGGATCTGCACCTGGTTTTGCCAATGGATGGACCACAACCAGTaGCGAGGGCTTCAGCATGCTGCCTTGAAGACGTACCCTGTTTTG +
Preference number: 5 (lower is better)
Translates to: AGICTWFCQWMDHNQ*RGLQHAALKTYPVL
Trigger: CAAAACAGGGTACGTCTTCAAGGCAGCATGCTGAAGCCCTCGTCACTGGTTGTGGTCCATCCATTGGCAAAACCAGGTGCAGATCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS TCA 90 bp TGCGGTAGAGTCGAAACAGGAGATCCCGTCTCCTTCGTAGCCTTCTaGGCATCTGCAGACGTAGCCACCTTCAGTGTTGATGCACCTGGA +
Preference number: 5 (lower is better)
Translates to: CGRVETGDPVSFVAF*ASADVATFSVDAPG
Trigger: TCCAGGTGCATCAACACTGAAGGTGGCTACGTCTGCAGATGCTCAGAAGGCTACGAAGGAGACGGGATCTCCTGTTTCGACTCTACCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000199615.5
CDS GCA 90 bp TTGCCAATGGATGGACCACAACCAGTGACGAGGGCTTCAGCATGCTaGCTTGAAGACGTACCCTGTTTTGGCCAGTCCTCTTGTTCACCC +
Preference number: 5 (lower is better)
Translates to: LPMDGPQPVTRASAC*LEDVPCFGQSSCSP
Trigger: GGGTGAACAAGAGGACTGGCCAAAACAGGGTACGTCTTCAAGGCAGCATGCTGAAGCCCTCGTCACTGGTTGTGGTCCATCCATTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS GCA 90 bp CATCCCAGGCCTTCACAAAACCTTCACGACACAAACACCGAGCTGTaGCCAGGCTCTCTTGGCAGATGTGTTCACAGCCTCCATTCCTGT +
Preference number: 5 (lower is better)
Translates to: HPRPSQNLHDTNTEL*PGSLGRCVHSLHSC
Trigger: ACAGGAATGGAGGCTGTGAACACATCTGCCAAGAGAGCCTGGGCACAGCTCGGTGTTTGTGTCGTGAAGGTTTTGTGAAGGCCTGGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS CCA 90 bp CTGCACCCTGTTTTGGCCAGTCCTCTTGTTCACCCTTATTACCGATaGGATAGCCCAATCCGAGACCCACAGGTGATCCTCAAACACGGC +
Preference number: 5 (lower is better)
Translates to: LHPVLASPLVHPYYR*DSPIRDPQVILKHG
Trigger: GCCGTGTTTGAGGATCACCTGTGGGTCTCGGATTGGGCTATCCCATCGGTAATAAGGGTGAACAAGAGGACTGGCCAAAACAGGGTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
CDS-3UTR CAA 90 bp AGCTATCCCGCTGTGCAGCTCTGCAGCTGTGCAGCTATCTTCAGGACCCTGAGCTTGGAGCCATCCAGATaGGCCATTTCAATCACAGAC +
Preference number: 5 (lower is better)
Translates to: SYPAVQLCSCAAIFRTLSLEPSR*AISITD
Trigger: GTCTGTGATTGAAATGGCCAATCTGGATGGCTCCAA...GCTCAGGGTCCTGAAGATAGCTGCACAGCTGCAGAGCTGCACAGCGGGATAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CAA 90 bp CTTAAAGCAAGAAGCAAAAGTCGCAGCTATCCCGCTGTGCAGCTCTGCAGCTGTTGTGCCCAGGCTCTCTaGGCAGATGTGTTCACAGCC +
Preference number: 5 (lower is better)
Translates to: LKARSKSRSYPAVQLCSCCAQAL*ADVFTA
Trigger: GGCTGTGAACACATCTGCCAAGAGAGCCTGGGCACA...ACAGCTGCAGAGCTGCACAGCGGGATAGCTGCGACTTTTGCTTCTTGCTTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS TCA 90 bp GTAGGTCATACCCAGGAAAGCAATCACATTCCCAGGATCCTGGCCTaGGAGGAAGACAGATCTGGCTGCATCCACCATTGTCAGGCGATG +
Preference number: 5 (lower is better)
Translates to: VGHTQESNHIPRILA*EEDRSGCIHHCQAM
Trigger: CATCGCCTGACAATGGTGGATGCAGCCAGATCTGTCTTCCTCTCAGGCCAGGATCCTGGGAATGTGATTGCTTTCCTGGGTATGACCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS GCA 90 bp GGGGTCCTCTGTCACTTGATGGTGGAATCCAGCAGCTTTGCCCTGTaGCCATTCCATCTATGTGGGGCTTCTGTCTCCATGAAGTCAGAT +
Preference number: 5 (lower is better)
Translates to: GVLCHLMVESSSFAL*PFHLCGASVSMKSD
Trigger: ATCTGACTTCATGGAGACAGAAGCCCCACATAGATGGAATGGGCACAGGGCAAAGCTGCTGGATTCCACCATCAAGTGACAGAGGACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS CCA 90 bp ACGTACCCTGTTTTGGCCAGTCCTCTTGTTCACCCTTATTACCGATaGGATAGCCCAATCCGAGACCCACAGGTGATCCTCAAACACGGC +
Preference number: 5 (lower is better)
Translates to: TYPVLASPLVHPYYR*DSPIRDPQVILKHG
Trigger: GCCGTGTTTGAGGATCACCTGTGGGTCTCGGATTGGGCTATCCCATCGGTAATAAGGGTGAACAAGAGGACTGGCCAAAACAGGGTACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS CCA 90 bp CTACTACTGCACCATTCGTACCATCCGCAGGCAGACTCCCATTCTTaGGGTCTTGGTGTTTCTCTAGGACCACAAACCAAGGTTGGGGAC +
Preference number: 5 (lower is better)
Translates to: LLLHHSYHPQADSHS*GLGVSLGPQTKVGD
Trigger: GTCCCCAACCTTGGTTTGTGGTCCTAGAGAAACACCAAGACCCCAAGAATGGGAGTCTGCCTGCGGATGGTACGAATGGTGCAGTAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CAA 90 bp AGCTATCCCGCTGTGCAGCTCTGCAGCTGTGCAGCTATCTTCAGGACCCTGAGCTCAATCACAGACCTCTaGGTGTCACACCAGTACAAA +
Preference number: 5 (lower is better)
Translates to: SYPAVQLCSCAAIFRTLSSITDL*VSHQYK
Trigger: TTTGTACTGGTGTGACACCAAGAGGTCTGTGATTGA...GCTCAGGGTCCTGAAGATAGCTGCACAGCTGCAGAGCTGCACAGCGGGATAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CAA 90 bp TTCCCAGTACCCACACGGCTGCACACAGATATCTGTAACTCCAGTCTCAGGGGAGATCTGCACCCTGTTTaGGCCAGTCCTCTTGTTCAC +
Preference number: 5 (lower is better)
Translates to: FPVPTRLHTDICNSSLRGDLHPV*ASPLVH
Trigger: GTGAACAAGAGGACTGGCCAAAACAGGGTGCAGATC...TCCCCTGAGACTGGAGTTACAGATATCTGTGTGCAGCCGTGTGGGTACTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
CDS TCA 90 bp CTCGTCAATATCGAAACAGGAGATCCCGTCTCCTTCGTAGCCTTCTaGGCATCTGCAGACGTAGCCACCTTCAGTGTTGATGCACCTGGA +
Preference number: 5 (lower is better)
Translates to: LVNIETGDPVSFVAF*ASADVATFSVDAPG
Trigger: TCCAGGTGCATCAACACTGAAGGTGGCTACGTCTGCAGATGCTCAGAAGGCTACGAAGGAGACGGGATCTCCTGTTTCGATATTGACGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
CDS GCA 90 bp CCACCAATTGCTGGTGATTTGTTCCATCTGGGTCAATCCGAGAGATaGTCTTTCCTTGTGAGAAAACTAGGAAGGGGGCAGGACCGGCAC +
Preference number: 5 (lower is better)
Translates to: PPIAGDLFHLGQSER*SFLVRKLGRGQDRH
Trigger: GTGCCGGTCCTGCCCCCTTCCTAGTTTTCTCACAAGGAAAGAGCATCTCTCGGATTGACCCAGATGGAACAAATCACCAGCAATTGGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS GCA 90 bp GTTTTGCCAATGGATGGACCACAACCAGTGACGAGGGCTTCAGCATaGTGCCTTGAAGACGTACCCTGTTTTGGCCAGTCCTCTTGTTCA +
Preference number: 5 (lower is better)
Translates to: VLPMDGPQPVTRASA*CLEDVPCFGQSSCS
Trigger: TGAACAAGAGGACTGGCCAAAACAGGGTACGTCTTCAAGGCAGCATGCTGAAGCCCTCGTCACTGGTTGTGGTCCATCCATTGGCAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS GCA 90 bp ATTTCCTGGGGTCCTCTGTCACTTGATGGTGGAATCCAGCAGCTTTaGCCTGTGCCCATTCCATCTATGTGGGGCTTCTGTCTCCATGAA +
Preference number: 5 (lower is better)
Translates to: ISWGPLSLDGGIQQL*PVPIPSMWGFCLHE
Trigger: TTCATGGAGACAGAAGCCCCACATAGATGGAATGGGCACAGGGCAAAGCTGCTGGATTCCACCATCAAGTGACAGAGGACCCCAGGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS CCA 90 bp AAGCAATCACATTCCCAGGATCCTGGCCTGAGAGGAAGACAGATCTaGCTGCATCCACCATTGTCAGGCGATGAACAACCAGTGCAAGTC +
Preference number: 5 (lower is better)
Translates to: KQSHSQDPGLRGRQI*LHPPLSGDEQPVQV
Trigger: GACTTGCACTGGTTGTTCATCGCCTGACAATGGTGGATGCAGCCAGATCTGTCTTCCTCTCAGGCCAGGATCCTGGGAATGTGATTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS-3UTR CAA 90 bp ACCTGCTTTAACCCACTCCTTCTGAGGCAAAAGGAAAAGAGGCAAACCGTCCAGACAGTCTCCTGGCCCTaGGATGCACAGCTATTCCTC +
Preference number: 5 (lower is better)
Translates to: TCFNPLLLRQKEKRQTVQTVSWP*DAQLFL
Trigger: GAGGAATAGCTGTGCATCCAAGGGCCAGGAGACTGT...CTGGACGGTTTGCCTCTTTTCCTTTTGCCTCAGAAGGAGTGGGTTAAAGCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CAA 90 bp CTTAAAGCAAGAAGCAAAAGTCGCAGCTATCCCGCTGTGCAGCTCTGCAGCTGTATAAGTCTTCGGCGTTaGGAGCCATCCAGATTGGCC +
Preference number: 5 (lower is better)
Translates to: LKARSKSRSYPAVQLCSCISLRR*EPSRLA
Trigger: GGCCAATCTGGATGGCTCCAAACGCCGAAGACTTAT...ACAGCTGCAGAGCTGCACAGCGGGATAGCTGCGACTTTTGCTTCTTGCTTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CAA 90 bp CAAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTAGCCCCGCTGCTGCTGTaGGGTCCGCTGCTGCTCACA +
Preference number: 5 (lower is better)
Translates to: QVCSILPSSAWFVIFPSVAPLLL*GPLLLT
Trigger: TGTGAGCAGCAGCGGACCCAACAGCAGCAGCGGGGC...TACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CAA 90 bp TCTTTTGAGTATCTTCAGTGGAACTGCTTAAAGCAAGAAGCAAAAGTCGCAGCTGCCCCGCTGCTGCTGTaGGGTCCGCTGCTGCTCACA +
Preference number: 5 (lower is better)
Translates to: SFEYLQWNCLKQEAKVAAAPLLL*GPLLLT
Trigger: TGTGAGCAGCAGCGGACCCAACAGCAGCAGCGGGGC...AGCTGCGACTTTTGCTTCTTGCTTTAAGCAGTTCCACTGAAGATACTCAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS TCA 90 bp CCGATATTCCCCCTGTCTCCAGCAGTGTTTTTACATCAACACCTTTaGGGTGTGCTCTGTGAAGGCTGCCGGTCACCTCTGAAGACCAAA +
Preference number: 5 (lower is better)
Translates to: PIFPLSPAVFLHQHL*GVLCEGCRSPLKTK
Trigger: TTTGGTCTTCAGAGGTGACCGGCAGCCTTCACAGAGCACACCTCAAAGGTGTTGATGTAAAAACACTGCTGGAGACAGGGGGAATATCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS TCA 90 bp AATGGATGGACCACAACCAGTGACGAGGGCTTCAGCATGCTGCCTTaGAGACGTACCCTGTTTTGGCCAGTCCTCTTGTTCACCCTTATT +
Preference number: 5 (lower is better)
Translates to: NGWTTTSDEGFSMLP*RRTLFWPVLLFTLI
Trigger: AATAAGGGTGAACAAGAGGACTGGCCAAAACAGGGTACGTCTTCAAGGCAGCATGCTGAAGCCCTCGTCACTGGTTGTGGTCCATCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS CCA 90 bp CGAGGGTGTACTACCATCAGTTTTCCAGGTGTCACAAAGGATGGATaGAGGTTAATCCTGACCGTGTCCTTCCCCGTGTGTTTGTTGGCT +
Preference number: 5 (lower is better)
Translates to: RGCTTISFPGVTKDG*RLILTVSFPVCLLA
Trigger: AGCCAACAAACACACGGGGAAGGACACGGTCAGGATTAACCTCCATCCATCCTTTGTGACACCTGGAAAACTGATGGTAGTACACCCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS CCA 90 bp ACAAAACCTTCACGACACAAACACCGAGCTGTGCCCAGGCTCTCTTaGCAGATGTGTTCACAGCCTCCATTCCTGTATAAGCAGGGATCT +
Preference number: 5 (lower is better)
Translates to: TKPSRHKHRAVPRLS*QMCSQPPFLYKQGS
Trigger: AGATCCCTGCTTATACAGGAATGGAGGCTGTGAACACATCTGCCAAGAGAGCCTGGGCACAGCTCGGTGTTTGTGTCGTGAAGGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000197713.2
ENSMUST00000199615.5
CDS-3UTR CAA 90 bp CTTAAAGCAAGAAGCAAAAGTCGCAGCTATCCCGCTGTGCAGCTCTGCAGCTGTGATGACTCCGTTCTGTaGGTCTACCCAGAGAACTTC +
Preference number: 5 (lower is better)
Translates to: LKARSKSRSYPAVQLCSCDDSVL*VYPENF
Trigger: GAAGTTCTCTGGGTAGACCAACAGAACGGAGTCATC...ACAGCTGCAGAGCTGCACAGCGGGATAGCTGCGACTTTTGCTTCTTGCTTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS-3UTR CAA 90 bp ACCTGCTTTAACCCACTCCTTCTGAGGCAAAAGGAAAAGAGGCAAACCGTCCAGATAAGTCTTCGGCGTTaGGAGCCATCCAGATTGGCC +
Preference number: 5 (lower is better)
Translates to: TCFNPLLLRQKEKRQTVQISLRR*EPSRLA
Trigger: GGCCAATCTGGATGGCTCCAAACGCCGAAGACTTAT...CTGGACGGTTTGCCTCTTTTCCTTTTGCCTCAGAAGGAGTGGGTTAAAGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CAA 90 bp CTTAAAGCAAGAAGCAAAAGTCGCAGCTATCCCGCTGTGCAGCTCTGCAGCTGTGATCTGCACCTGGTTTaGCCAATGGATGGACCACAA +
Preference number: 5 (lower is better)
Translates to: LKARSKSRSYPAVQLCSCDLHLV*PMDGPQ
Trigger: TTGTGGTCCATCCATTGGCAAAACCAGGTGCAGATC...ACAGCTGCAGAGCTGCACAGCGGGATAGCTGCGACTTTTGCTTCTTGCTTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CAA 90 bp ATTTATCACAATTCAGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATGCCCCGCTGCTGCTGTaGGGTCCGCTGCTGCTCACA +
Preference number: 5 (lower is better)
Translates to: IYHNSESTIMSMGHTWQYAPLLL*GPLLLT
Trigger: TGTGAGCAGCAGCGGACCCAACAGCAGCAGCGGGGC...ATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCTGAATTGTGATAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CAA 90 bp ACCTGCTTTAACCCACTCCTTCTGAGGCAAAAGGAAAAGAGGCAAACCGTCCAGGGCAGACTCCCATTCTaGGGGTCTTGGTGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: TCFNPLLLRQKEKRQTVQGRLPF*GSWCFS
Trigger: AGAGAAACACCAAGACCCCAAGAATGGGAGTCTGCC...CTGGACGGTTTGCCTCTTTTCCTTTTGCCTCAGAAGGAGTGGGTTAAAGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS TCA 90 bp ATATCAGAACACAGGTTTCCATCCCTGGCAAACCCTTTCAGACACTaGCACTCAGCAGTCTCTCCGTCTGAAACGCATCGAGCATGGCTT +
Preference number: 5 (lower is better)
Translates to: ISEHRFPSLANPFRH*HSAVSPSETHRAWL
Trigger: AAGCCATGCTCGATGCGTTTCAGACGGAGAGACTGCTGAGTGTCAGTGTCTGAAAGGGTTTGCCAGGGATGGAAACCTGTGTTCTGATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS CCA 90 bp TGCACGAGGGTGTACTACCATCAGTTTTCCAGGTGTCACAAAGGATaGATGGAGGTTAATCCTGACCGTGTCCTTCCCCGTGTGTTTGTT +
Preference number: 5 (lower is better)
Translates to: CTRVYYHQFSRCHKG*MEVNPDRVLPRVFV
Trigger: AACAAACACACGGGGAAGGACACGGTCAGGATTAACCTCCATCCATCCTTTGTGACACCTGGAAAACTGATGGTAGTACACCCTCGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS CCA 90 bp AGACCTTCAAGCGTATCTACTCCTTCTGTGATCAGTCTTTCTCGCTaGGACCCATCCATATTAGCCCTCTCTATCCACTTCAGGGCTGTC +
Preference number: 5 (lower is better)
Translates to: RPSSVSTPSVISLSR*DPSILALSIHFRAV
Trigger: GACAGCCCTGAAGTGGATAGAGAGGGCTAATATGGATGGGTCCCAGCGAGAAAGACTGATCACAGAAGGAGTAGATACGCTTGAAGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000197713.2
ENSMUST00000199615.5
CDS-3UTR CAA 90 bp TCCTTGACCCCCTACACCATCAATGTACTCTCTGTCATGTTTCTTCGTCTGCCAATAAGTCTTCGGCGTTaGGAGCCATCCAGATTGGCC +
Preference number: 5 (lower is better)
Translates to: SLTPYTINVLSVMFLRLPISLRR*EPSRLA
Trigger: GGCCAATCTGGATGGCTCCAAACGCCGAAGACTTAT...TGGCAGACGAAGAAACATGACAGAGAGTACATTGATGGTGTAGGGGGTCAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
CDS-3UTR CAA 90 bp AACTCACAGTTCATGCCTGACACCATGATTTCAGCCACTAGTGTGGAAGATTCTTGTGCCCAGGCTCTCTaGGCAGATGTGTTCACAGCC +
Preference number: 5 (lower is better)
Translates to: NSQFMPDTMISATSVEDSCAQAL*ADVFTA
Trigger: GGCTGTGAACACATCTGCCAAGAGAGCCTGGGCACA...AGAATCTTCCACACTAGTGGCTGAAATCATGGTGTCAGGCATGAACTGTGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
CDS TCA 90 bp GTCTCCAGCAGTGTTTTTACATCAACACCTTTGAGGTGTGCTCTGTaGAGGCTGCCGGTCACCTCTGAAGACCAAAACATCAACCTCTCT +
Preference number: 5 (lower is better)
Translates to: VSSSVFTSTPLRCAL*RLPVTSEDQNINLS
Trigger: AGAGAGGTTGATGTTTTGGTCTTCAGAGGTGACCGGCAGCCTTCACAGAGCACACCTCAAAGGTGTTGATGTAAAAACACTGCTGGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS GCA 90 bp GACCATCTGATGTCAGGACACAGCCATGACTGCACTTTGATACGTTaGCTGGGCAGGAAACAAGTTCGTGACATTGTTTCCCATCAGGAA +
Preference number: 5 (lower is better)
Translates to: DHLMSGHSHDCTLIR*LGRKQVRDIVSHQE
Trigger: TTCCTGATGGGAAACAATGTCACGAACTTGTTTCCTGCCCAGGCAACGTATCAAAGTGCAGTCATGGCTGTGTCCTGACATCAGATGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS-3UTR CAA 90 bp ACCTGCTTTAACCCACTCCTTCTGAGGCAAAAGGAAAAGAGGCAAACCGTCCAGATGCACACGCCACCATaGAGGCAGTATCCATCATAT +
Preference number: 5 (lower is better)
Translates to: TCFNPLLLRQKEKRQTVQMHTPP*RQYPSY
Trigger: ATATGATGGATACTGCCTCAATGGTGGCGTGTGCAT...CTGGACGGTTTGCCTCTTTTCCTTTTGCCTCAGAAGGAGTGGGTTAAAGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS TCA 90 bp ATATCCATGTCTGCTGAGATGCCAGCATCCACCACCAATTGCTGGTaGTTTGTTCCATCTGGGTCAATCCGAGAGATGCTCTTTCCTTGT +
Preference number: 5 (lower is better)
Translates to: ISMSAEMPASTTNCW*FVPSGSIREMLFPC
Trigger: ACAAGGAAAGAGCATCTCTCGGATTGACCCAGATGGAACAAATCACCAGCAATTGGTGGTGGATGCTGGCATCTCAGCAGACATGGATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS TCA 90 bp CCACAGGGTCATAATCCAAGGCAAAAACCATTCCCATCTGCCGGCTaGGCAGAACTTTGTAGTCTGTTCCATCAAAATGCATGTGTCGGA +
Preference number: 5 (lower is better)
Translates to: PQGHNPRQKPFPSAG*AELCSLFHQNACVG
Trigger: TCCGACACATGCATTTTGATGGAACAGACTACAAAGTTCTGCTCAGCCGGCAGATGGGAATGGTTTTTGCCTTGGATTATGACCCTGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS-3UTR CAA 90 bp ACCTGCTTTAACCCACTCCTTCTGAGGCAAAAGGAAAAGAGGCAAACCGTCCAGGGATGTCCTGGGAATTaGCAAACAGTAAAAGTGGCT +
Preference number: 5 (lower is better)
Translates to: TCFNPLLLRQKEKRQTVQGCPGN*QTVKVA
Trigger: AGCCACTTTTACTGTTTGCAAATTCCCAGGACATCC...CTGGACGGTTTGCCTCTTTTCCTTTTGCCTCAGAAGGAGTGGGTTAAAGCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS-3UTR CAA 90 bp ACCTGCTTTAACCCACTCCTTCTGAGGCAAAAGGAAAAGAGGCAAACCGTCCAGTCAATCACAGACCTCTaGGTGTCACACCAGTACAAA +
Preference number: 5 (lower is better)
Translates to: TCFNPLLLRQKEKRQTVQSITDL*VSHQYK
Trigger: TTTGTACTGGTGTGACACCAAGAGGTCTGTGATTGA...CTGGACGGTTTGCCTCTTTTCCTTTTGCCTCAGAAGGAGTGGGTTAAAGCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CAA 90 bp CAAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTATGTGCCCAGGCTCTCTaGGCAGATGTGTTCACAGCC +
Preference number: 5 (lower is better)
Translates to: QVCSILPSSAWFVIFPSVCAQAL*ADVFTA
Trigger: GGCTGTGAACACATCTGCCAAGAGAGCCTGGGCACA...TACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CAA 90 bp AGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATATCATAGCAAAAGTGGTCTTCCCCTCTGTTaGAGAAGTTCGGGGTCAGGA +
Preference number: 5 (lower is better)
Translates to: RKHNYEHGPHLAVYHSKSGLPLC*RSSGSG
Trigger: TCCTGACCCCGAACTTCTCAAACAGAGGGGAAGACC...ACTTTTGCTATGATATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS-3UTR CAA 90 bp TCTTTTGAGTATCTTCAGTGGAACTGCTTAAAGCAAGAAGCAAAAGTCGCAGCTACAGTCTCCTGGCCCTaGGATGCACAGCTATTCCTC +
Preference number: 5 (lower is better)
Translates to: SFEYLQWNCLKQEAKVAATVSWP*DAQLFL
Trigger: GAGGAATAGCTGTGCATCCAAGGGCCAGGAGACTGT...AGCTGCGACTTTTGCTTCTTGCTTTAAGCAGTTCCACTGAAGATACTCAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CAA 90 bp TCTTTTGAGTATCTTCAGTGGAACTGCTTAAAGCAAGAAGCAAAAGTCGCAGCTCTGGGTTCCAGTAGATaGGAGCTGGCTATCAGCACC +
Preference number: 5 (lower is better)
Translates to: SFEYLQWNCLKQEAKVAALGSSR*ELAIST
Trigger: GGTGCTGATAGCCAGCTCCAATCTACTGGAACCCAG...AGCTGCGACTTTTGCTTCTTGCTTTAAGCAGTTCCACTGAAGATACTCAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CAA 90 bp TCCTTGACCCCCTACACCATCAATGTACTCTCTGTCATGTTTCTTCGTCTGCCATCAATCACAGACCTCTaGGTGTCACACCAGTACAAA +
Preference number: 5 (lower is better)
Translates to: SLTPYTINVLSVMFLRLPSITDL*VSHQYK
Trigger: TTTGTACTGGTGTGACACCAAGAGGTCTGTGATTGA...TGGCAGACGAAGAAACATGACAGAGAGTACATTGATGGTGTAGGGGGTCAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
CDS-3UTR CAA 90 bp TCTTTTGAGTATCTTCAGTGGAACTGCTTAAAGCAAGAAGCAAAAGTCGCAGCTGACCACAAACCAAGGTaGGGGACAAGAAGCCACAGC +
Preference number: 5 (lower is better)
Translates to: SFEYLQWNCLKQEAKVAADHKPR*GTRSHS
Trigger: GCTGTGGCTTCTTGTCCCCAACCTTGGTTTGTGGTC...AGCTGCGACTTTTGCTTCTTGCTTTAAGCAGTTCCACTGAAGATACTCAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CAA 90 bp AAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTACGACCACAAACCAAGGTaGGGGACAAGAAGCCACAGC +
Preference number: 5 (lower is better)
Translates to: KSVAFYHHQPGLLFSLLYDHKPR*GTRSHS
Trigger: GCTGTGGCTTCTTGTCCCCAACCTTGGTTTGTGGTC...GTACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CAA 90 bp AGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATATCATAGCAAAAGTTGGAATCCAGCAGCTTaGCCCTGTGCCCATTCCATC +
Preference number: 5 (lower is better)
Translates to: RKHNYEHGPHLAVYHSKSWNPAA*PCAHSI
Trigger: GATGGAATGGGCACAGGGCAAAGCTGCTGGATTCCA...ACTTTTGCTATGATATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CAA 90 bp AAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTACTGGAATCCAGCAGCTTaGCCCTGTGCCCATTCCATC +
Preference number: 5 (lower is better)
Translates to: KSVAFYHHQPGLLFSLLYWNPAA*PCAHSI
Trigger: GATGGAATGGGCACAGGGCAAAGCTGCTGGATTCCA...GTACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS CCA 90 bp GAATTTTTCCCTGTCATATCTGTTACGGTGATGACTCCGTTCTGTTaGTCTACCCAGAGAACTTCATCATCTATCCAGTCTATGGCCAGC +
Preference number: 5 (lower is better)
Translates to: EFFPVISVTVMTPFC*STQRTSSSIQSMAS
Trigger: GCTGGCCATAGACTGGATAGATGATGAAGTTCTCTGGGTAGACCAACAGAACGGAGTCATCACCGTAACAGATATGACAGGGAAAAATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS-3UTR CAA 90 bp TCTTTTGAGTATCTTCAGTGGAACTGCTTAAAGCAAGAAGCAAAAGTCGCAGCTTCCTTCCCCGTGTGTTaGTTGGCTATCCAAATCGCC +
Preference number: 5 (lower is better)
Translates to: SFEYLQWNCLKQEAKVAASFPVC*LAIQIA
Trigger: GGCGATTTGGATAGCCAACAAACACACGGGGAAGGA...AGCTGCGACTTTTGCTTCTTGCTTTAAGCAGTTCCACTGAAGATACTCAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS-3UTR CAA 90 bp CAAAGGCTCTGCTGTCTTATATTGTCTTTGGGGCTAAGTGAATACAAAACCAAAACAGTCTCCTGGCCCTaGGATGCACAGCTATTCCTC +
Preference number: 5 (lower is better)
Translates to: QRLCCLILSLGLSEYKTKTVSWP*DAQLFL
Trigger: GAGGAATAGCTGTGCATCCAAGGGCCAGGAGACTGT...TTTGGTTTTGTATTCACTTAGCCCCAAAGACAATATAAGACAGCAGAGCCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
CDS-3UTR CAA 90 bp ATTTATCACAATTCAGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATCTGGGTTCCAGTAGATaGGAGCTGGCTATCAGCACC +
Preference number: 5 (lower is better)
Translates to: IYHNSESTIMSMGHTWQYLGSSR*ELAIST
Trigger: GGTGCTGATAGCCAGCTCCAATCTACTGGAACCCAG...ATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCTGAATTGTGATAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CAA 90 bp CAAAGGCTCTGCTGTCTTATATTGTCTTTGGGGCTAAGTGAATACAAAACCAAACTGGGTTCCAGTAGATaGGAGCTGGCTATCAGCACC +
Preference number: 5 (lower is better)
Translates to: QRLCCLILSLGLSEYKTKLGSSR*ELAIST
Trigger: GGTGCTGATAGCCAGCTCCAATCTACTGGAACCCAG...TTTGGTTTTGTATTCACTTAGCCCCAAAGACAATATAAGACAGCAGAGCCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
CDS-3UTR CAA 90 bp AACTCACAGTTCATGCCTGACACCATGATTTCAGCCACTAGTGTGGAAGATTCTTTGGAGCCATCCAGATaGGCCATTTCAATCACAGAC +
Preference number: 5 (lower is better)
Translates to: NSQFMPDTMISATSVEDSLEPSR*AISITD
Trigger: GTCTGTGATTGAAATGGCCAATCTGGATGGCTCCAA...AGAATCTTCCACACTAGTGGCTGAAATCATGGTGTCAGGCATGAACTGTGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
CDS-3UTR CAA 90 bp TCTTTTGAGTATCTTCAGTGGAACTGCTTAAAGCAAGAAGCAAAAGTCGCAGCTATAAGTCTTCGGCGTTaGGAGCCATCCAGATTGGCC +
Preference number: 5 (lower is better)
Translates to: SFEYLQWNCLKQEAKVAAISLRR*EPSRLA
Trigger: GGCCAATCTGGATGGCTCCAAACGCCGAAGACTTAT...AGCTGCGACTTTTGCTTCTTGCTTTAAGCAGTTCCACTGAAGATACTCAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CAA 90 bp TACCAGGGAAAGAGCATACAGAATTTCCTACTGGTGGAGTGGAAGCTGTTGGAATTTTGGCCAGTCCTCTaGTTCACCCTTATTACCGAT +
Preference number: 5 (lower is better)
Translates to: YQGKSIQNFLLVEWKLLEFWPVL*FTLITD
Trigger: ATCGGTAATAAGGGTGAACAAGAGGACTGGCCAAAA...TTCCAACAGCTTCCACTCCACCAGTAGGAAATTCTGTATGCTCTTTCCCTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
CDS-3UTR CAA 90 bp AGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATATCATAGCAAAAGTGGCAGACTCCCATTCTaGGGGTCTTGGTGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: RKHNYEHGPHLAVYHSKSGRLPF*GSWCFS
Trigger: AGAGAAACACCAAGACCCCAAGAATGGGAGTCTGCC...ACTTTTGCTATGATATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CAA 90 bp CAAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTAGGCAGACTCCCATTCTaGGGGTCTTGGTGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: QVCSILPSSAWFVIFPSVGRLPF*GSWCFS
Trigger: AGAGAAACACCAAGACCCCAAGAATGGGAGTCTGCC...TACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CAA 90 bp ATTTATCACAATTCAGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATTGGAATCCAGCAGCTTaGCCCTGTGCCCATTCCATC +
Preference number: 5 (lower is better)
Translates to: IYHNSESTIMSMGHTWQYWNPAA*PCAHSI
Trigger: GATGGAATGGGCACAGGGCAAAGCTGCTGGATTCCA...ATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCTGAATTGTGATAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CAA 90 bp AAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTACAAGACGTACCCTGTTTaGGCCAGTCCTCTTGTTCAC +
Preference number: 5 (lower is better)
Translates to: KSVAFYHHQPGLLFSLLYKTYPV*ASPLVH
Trigger: GTGAACAAGAGGACTGGCCAAAACAGGGTACGTCTT...GTACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CAA 90 bp TCTTTTGAGTATCTTCAGTGGAACTGCTTAAAGCAAGAAGCAAAAGTCGCAGCTAAGACGTACCCTGTTTaGGCCAGTCCTCTTGTTCAC +
Preference number: 5 (lower is better)
Translates to: SFEYLQWNCLKQEAKVAAKTYPV*ASPLVH
Trigger: GTGAACAAGAGGACTGGCCAAAACAGGGTACGTCTT...AGCTGCGACTTTTGCTTCTTGCTTTAAGCAGTTCCACTGAAGATACTCAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CAA 90 bp AGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATATCATAGCAAAAGTGATCTGCACCTGGTTTaGCCAATGGATGGACCACAA +
Preference number: 5 (lower is better)
Translates to: RKHNYEHGPHLAVYHSKSDLHLV*PMDGPQ
Trigger: TTGTGGTCCATCCATTGGCAAAACCAGGTGCAGATC...ACTTTTGCTATGATATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CAA 90 bp CAAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTAGATCTGCACCTGGTTTaGCCAATGGATGGACCACAA +
Preference number: 5 (lower is better)
Translates to: QVCSILPSSAWFVIFPSVDLHLV*PMDGPQ
Trigger: TTGTGGTCCATCCATTGGCAAAACCAGGTGCAGATC...TACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CAA 90 bp AGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATATCATAGCAAAAGTAGCATCCACCACCAATaGCTGGTGATTTGTTCCATC +
Preference number: 5 (lower is better)
Translates to: RKHNYEHGPHLAVYHSKSSIHHQ*LVICSI
Trigger: GATGGAACAAATCACCAGCAATTGGTGGTGGATGCT...ACTTTTGCTATGATATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS-3UTR CAA 90 bp ATTTATCACAATTCAGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATTTCCCCGTGTGTTTGTaGGCTATCCAAATCGCCTTG +
Preference number: 5 (lower is better)
Translates to: IYHNSESTIMSMGHTWQYFPVCL*AIQIAL
Trigger: CAAGGCGATTTGGATAGCCAACAAACACACGGGGAA...ATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCTGAATTGTGATAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS-3UTR CAA 90 bp CAAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTATTGGAGCCATCCAGATaGGCCATTTCAATCACAGAC +
Preference number: 5 (lower is better)
Translates to: QVCSILPSSAWFVIFPSVLEPSR*AISITD
Trigger: GTCTGTGATTGAAATGGCCAATCTGGATGGCTCCAA...TACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CAA 90 bp AGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATATCATAGCAAAAGTTTGGAGCCATCCAGATaGGCCATTTCAATCACAGAC +
Preference number: 5 (lower is better)
Translates to: RKHNYEHGPHLAVYHSKSLEPSR*AISITD
Trigger: GTCTGTGATTGAAATGGCCAATCTGGATGGCTCCAA...ACTTTTGCTATGATATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CAA 90 bp AGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATATCATAGCAAAAGTATGCACACGCCACCATaGAGGCAGTATCCATCATAT +
Preference number: 5 (lower is better)
Translates to: RKHNYEHGPHLAVYHSKSMHTPP*RQYPSY
Trigger: ATATGATGGATACTGCCTCAATGGTGGCGTGTGCAT...ACTTTTGCTATGATATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CAA 90 bp TCTTTTGAGTATCTTCAGTGGAACTGCTTAAAGCAAGAAGCAAAAGTCGCAGCTAACAAGTTCGTGACATaGTTTCCCATCAGGAAGCAG +
Preference number: 5 (lower is better)
Translates to: SFEYLQWNCLKQEAKVAANKFVT*FPIRKQ
Trigger: CTGCTTCCTGATGGGAAACAATGTCACGAACTTGTT...AGCTGCGACTTTTGCTTCTTGCTTTAAGCAGTTCCACTGAAGATACTCAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS-3UTR CAA 90 bp AAGTCTGTAGCATTCTACCATCATCAGCCTGGTTTGTTATTTTCCCTTCTGTACTTTTGGCCAGTCCTCTaGTTCACCCTTATTACCGAT +
Preference number: 5 (lower is better)
Translates to: KSVAFYHHQPGLLFSLLYFWPVL*FTLITD
Trigger: ATCGGTAATAAGGGTGAACAAGAGGACTGGCCAAAA...GTACAGAAGGGAAAATAACAAACCAGGCTGATGATGGTAGAATGCTACAGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS-3UTR CAA 90 bp AGAAAGCACAATTATGAGCATGGGCCACACTTGGCAGTATATCATAGCAAAAGTTTTTGGCCAGTCCTCTaGTTCACCCTTATTACCGAT +
Preference number: 5 (lower is better)
Translates to: RKHNYEHGPHLAVYHSKSFWPVL*FTLITD
Trigger: ATCGGTAATAAGGGTGAACAAGAGGACTGGCCAAAA...ACTTTTGCTATGATATACTGCCAAGTGTGGCCCATGCTCATAATTGTGCTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS CCA 72 bp TGCGGTAGAGTCAGGGCAACTCAGTCCGGGCGAGGATaGGCGGCCTGCGCAGGTGCAGTTGTAGCCTCCCTC +
Preference number: 6 (lower is better)
Translates to: CGRVRATQSGRG*AACAGAVVASL
Trigger: GAGGGAGGCTACAACTGCACCTGCGCAGGCCGCCCATCCTCGCCCGGACTGAGTTGCCCTGACTCTACCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
CDS GCA 72 bp ACCAAGGTTGGGGACAAGAAGCCACAGCTGCCCCGCTaGTGCTGTTGGGTCCGCTGCTGCTCACACTTCCGC +
Preference number: 6 (lower is better)
Translates to: TKVGDKKPQLPR*CCWVRCCSHFR
Trigger: GCGGAAGTGTGAGCAGCAGCGGACCCAACAGCAGCAGCGGGGCAGCTGTGGCTTCTTGTCCCCAACCTTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS CAA 72 bp TGGGGACAAGAAGCCACAGCTGCCCCGCTGCTGCTGTaGGGTCCGCTGCTGCTCACACTTCCGCTTGGCTCA +
Preference number: 6 (lower is better)
Translates to: WGQEATAAPLLL*GPLLLTLPLGS
Trigger: TGAGCCAAGCGGAAGTGTGAGCAGCAGCGGACCCAACAGCAGCAGCGGGGCAGCTGTGGCTTCTTGTCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS GCA 72 bp CCACAGCTGCCCCGCTGCTGCTGTTGGGTCCGCTGCTaGTCACACTTCCGCTTGGCTCATCACAAGGGTTCT +
Preference number: 6 (lower is better)
Translates to: PQLPRCCCWVRC*SHFRLAHHKGS
Trigger: AGAACCCTTGTGATGAGCCAAGCGGAAGTGTGAGCAGCAGCGGACCCAACAGCAGCAGCGGGGCAGCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS GCA 72 bp AAGCCACAGCTGCCCCGCTGCTGCTGTTGGGTCCGCTaGTGCTCACACTTCCGCTTGGCTCATCACAAGGGT +
Preference number: 6 (lower is better)
Translates to: KPQLPRCCCWVR*CSHFRLAHHKG
Trigger: ACCCTTGTGATGAGCCAAGCGGAAGTGTGAGCAGCAGCGGACCCAACAGCAGCAGCGGGGCAGCTGTGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS GCA 72 bp AAGGTTGGGGACAAGAAGCCACAGCTGCCCCGCTGCTaGTGTTGGGTCCGCTGCTGCTCACACTTCCGCTTG +
Preference number: 6 (lower is better)
Translates to: KVGDKKPQLPRC*CWVRCCSHFRL
Trigger: CAAGCGGAAGTGTGAGCAGCAGCGGACCCAACAGCAGCAGCGGGGCAGCTGTGGCTTCTTGTCCCCAACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS GCA 72 bp GACCACAAACCAAGGTTGGGGACAAGAAGCCACAGCTaGCCCGCTGCTGCTGTTGGGTCCGCTGCTGCTCAC +
Preference number: 6 (lower is better)
Translates to: DHKPRLGTRSHS*PAAAVGSAAAH
Trigger: GTGAGCAGCAGCGGACCCAACAGCAGCAGCGGGGCAGCTGTGGCTTCTTGTCCCCAACCTTGGTTTGTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS CAA 90 bp AACCAAGGTTGGGGACAAGAAGCCACAGCTGCCCCGCTGCTGCTGTaGGGTCCGCTGCTGCTCACACTTCCGCTTGGCTCATCACAAGGG +
Preference number: 6 (lower is better)
Translates to: NQGWGQEATAAPLLL*GPLLLTLPLGSSQG
Trigger: CCCTTGTGATGAGCCAAGCGGAAGTGTGAGCAGCAGCGGACCCAACAGCAGCAGCGGGGCAGCTGTGGCTTCTTGTCCCCAACCTTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS GCA 72 bp GTCCAAATGGTGGCCATCTTCCCCAAGGAGAGAGGGTaGGGTAGAGTCAGGGCAACTCAGTCCGGGCGAGGA +
Preference number: 6 (lower is better)
Translates to: VQMVAIFPKERG*GRVRATQSGRG
Trigger: TCCTCGCCCGGACTGAGTTGCCCTGACTCTACCGCACCCTCTCTCCTTGGGGAAGATGGCCACCATTTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
CDS GCA 72 bp GAGCTGCAGGGAGGGAGACAGGCCAGCATCTACTACTaGACCATTCGTACCATCCGCAGGCAGACTCCCATT +
Preference number: 6 (lower is better)
Translates to: ELQGGRQASIYY*TIRTIRRQTPI
Trigger: AATGGGAGTCTGCCTGCGGATGGTACGAATGGTGCAGTAGTAGATGCTGGCCTGTCTCCCTCCCTGCAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS GCA 72 bp CCATCTATGTGGGGCTTCTGTCTCCATGAAGTCAGATaGACTGACCCGAGCTGCAGGGAGGGAGACAGGCCA +
Preference number: 6 (lower is better)
Translates to: PSMWGFCLHEVR*TDPSCREGDRP
Trigger: TGGCCTGTCTCCCTCCCTGCAGCTCGGGTCAGTGCATCTGACTTCATGGAGACAGAAGCCCCACATAGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS CCA 72 bp GGGTCTTGGTGTTTCTCTAGGACCACAAACCAAGGTTaGGGACAAGAAGCCACAGCTGCCCCGCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: GSWCFSRTTNQG*GQEATAAPLLL
Trigger: CAGCAGCAGCGGGGCAGCTGTGGCTTCTTGTCCCCAACCTTGGTTTGTGGTCCTAGAGAAACACCAAGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS CAA 72 bp ACATCCCTACGTCCGTCCAGAACAGTCTCCTGGCCCTaGGATGCACAGCTATTCCTCGCGGCCTCGAGATTC +
Preference number: 6 (lower is better)
Translates to: TSLRPSRTVSWP*DAQLFLAASRF
Trigger: GAATCTCGAGGCCGCGAGGAATAGCTGTGCATCCAAGGGCCAGGAGACTGTTCTGGACGGACGTAGGGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000197713.2
ENSMUST00000199615.5
CDS GCA 72 bp GTCCAAATGGTGGCCATCTTCCCCAAGGAGAGAGGGTaGGGTAGAGTCGAAACAGGAGATCCCGTCTCCTTC +
Preference number: 6 (lower is better)
Translates to: VQMVAIFPKERG*GRVETGDPVSF
Trigger: GAAGGAGACGGGATCTCCTGTTTCGACTCTACCGCACCCTCTCTCCTTGGGGAAGATGGCCACCATTTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000199615.5
CDS TCA 72 bp AGATTGGAGCTGGCTATCAGCACCCGGTCGGAACCTTaGAGGGAAGCGCTTTCAATCCGTGGAGACATCCCT +
Preference number: 6 (lower is better)
Translates to: RLELAISTRSEP*REALSIRGDIP
Trigger: AGGGATGTCTCCACGGATTGAAAGCGCTTCCCTTCAAGGTTCCGACCGGGTGCTGATAGCCAGCTCCAATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000197713.2
ENSMUST00000199615.5
CDS GCA 72 bp GATGGACCACAACCAGTGACGAGGGCTTCAGCATGCTaGCTTGAAGACGTACCCTGTTTTGGCCAGTCCTCT +
Preference number: 6 (lower is better)
Translates to: DGPQPVTRASAC*LEDVPCFGQSS
Trigger: AGAGGACTGGCCAAAACAGGGTACGTCTTCAAGGCAGCATGCTGAAGCCCTCGTCACTGGTTGTGGTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS GCA 72 bp ATGGATGGACCACAACCAGTGACGAGGGCTTCAGCATaGTGCCTTGAAGACGTACCCTGTTTTGGCCAGTCC +
Preference number: 6 (lower is better)
Translates to: MDGPQPVTRASA*CLEDVPCFGQS
Trigger: GGACTGGCCAAAACAGGGTACGTCTTCAAGGCAGCATGCTGAAGCCCTCGTCACTGGTTGTGGTCCATCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS GCA 72 bp TTCTGTCTCCATGAAGTCAGATGCACTGACCCGAGCTaGAGGGAGGGAGACAGGCCAGCATCTACTACTGCA +
Preference number: 6 (lower is better)
Translates to: FCLHEVRCTDPS*REGDRPASTTA
Trigger: TGCAGTAGTAGATGCTGGCCTGTCTCCCTCCCTGCAGCTCGGGTCAGTGCATCTGACTTCATGGAGACAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS CAA 90 bp CAGGATCCTGGCCTGAGAGGAAGACAGATCTGGCTGCATCCACCATaGTCAGGCGATGAACAACCAGTGCAAGTCTTCCCATCTCTCCCA +
Preference number: 6 (lower is better)
Translates to: QDPGLRGRQIWLHPP*SGDEQPVQVFPSLP
Trigger: TGGGAGAGATGGGAAGACTTGCACTGGTTGTTCATCGCCTGACAATGGTGGATGCAGCCAGATCTGTCTTCCTCTCAGGCCAGGATCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS TCA 72 bp CCCCTGTCTCCAGCAGTGTTTTTACATCAACACCTTTaGGGTGTGCTCTGTGAAGGCTGCCGGTCACCTCTG +
Preference number: 6 (lower is better)
Translates to: PLSPAVFLHQHL*GVLCEGCRSPL
Trigger: CAGAGGTGACCGGCAGCCTTCACAGAGCACACCTCAAAGGTGTTGATGTAAAAACACTGCTGGAGACAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS TCA 72 bp ACCACAACCAGTGACGAGGGCTTCAGCATGCTGCCTTaGAGACGTACCCTGTTTTGGCCAGTCCTCTTGTTC +
Preference number: 6 (lower is better)
Translates to: TTTSDEGFSMLP*RRTLFWPVLLF
Trigger: GAACAAGAGGACTGGCCAAAACAGGGTACGTCTTCAAGGCAGCATGCTGAAGCCCTCGTCACTGGTTGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS TCA 72 bp TGCACCTGGTTTTGCCAATGGATGGACCACAACCAGTaGCGAGGGCTTCAGCATGCTGCCTTGAAGACGTAC +
Preference number: 6 (lower is better)
Translates to: CTWFCQWMDHNQ*RGLQHAALKTY
Trigger: GTACGTCTTCAAGGCAGCATGCTGAAGCCCTCGTCACTGGTTGTGGTCCATCCATTGGCAAAACCAGGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS GCA 72 bp CCTTCACAAAACCTTCACGACACAAACACCGAGCTGTaGCCAGGCTCTCTTGGCAGATGTGTTCACAGCCTC +
Preference number: 6 (lower is better)
Translates to: PSQNLHDTNTEL*PGSLGRCVHSL
Trigger: GAGGCTGTGAACACATCTGCCAAGAGAGCCTGGGCACAGCTCGGTGTTTGTGTCGTGAAGGTTTTGTGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS CCA 72 bp GTACCATCCGCAGGCAGACTCCCATTCTTGGGGTCTTaGTGTTTCTCTAGGACCACAAACCAAGGTTGGGGA +
Preference number: 6 (lower is better)
Translates to: VPSAGRLPFLGS*CFSRTTNQGWG
Trigger: TCCCCAACCTTGGTTTGTGGTCCTAGAGAAACACCAAGACCCCAAGAATGGGAGTCTGCCTGCGGATGGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS CAA 72 bp GGCCTGAGAGGAAGACAGATCTGGCTGCATCCACCATaGTCAGGCGATGAACAACCAGTGCAAGTCTTCCCA +
Preference number: 6 (lower is better)
Translates to: GLRGRQIWLHPP*SGDEQPVQVFP
Trigger: TGGGAAGACTTGCACTGGTTGTTCATCGCCTGACAATGGTGGATGCAGCCAGATCTGTCTTCCTCTCAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS TCA 72 bp CACAGGTTTCCATCCCTGGCAAACCCTTTCAGACACTaGCACTCAGCAGTCTCTCCGTCTGAAACGCATCGA +
Preference number: 6 (lower is better)
Translates to: HRFPSLANPFRH*HSAVSPSETHR
Trigger: TCGATGCGTTTCAGACGGAGAGACTGCTGAGTGTCAGTGTCTGAAAGGGTTTGCCAGGGATGGAAACCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS CCA 72 bp GTTTTGGCCAGTCCTCTTGTTCACCCTTATTACCGATaGGATAGCCCAATCCGAGACCCACAGGTGATCCTC +
Preference number: 6 (lower is better)
Translates to: VLASPLVHPYYR*DSPIRDPQVIL
Trigger: GAGGATCACCTGTGGGTCTCGGATTGGGCTATCCCATCGGTAATAAGGGTGAACAAGAGGACTGGCCAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000197713.2
ENSMUST00000199615.5
CDS CCA 72 bp TATAAGCAGGGATCTGCACCTGGTTTTGCCAATGGATaGACCACAACCAGTGACGAGGGCTTCAGCATGCTG +
Preference number: 6 (lower is better)
Translates to: YKQGSAPGFANG*TTTSDEGFSML
Trigger: CAGCATGCTGAAGCCCTCGTCACTGGTTGTGGTCCATCCATTGGCAAAACCAGGTGCAGATCCCTGCTTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS CCA 72 bp TCACGACACAAACACCGAGCTGTGCCCAGGCTCTCTTaGCAGATGTGTTCACAGCCTCCATTCCTGTATAAG +
Preference number: 6 (lower is better)
Translates to: SRHKHRAVPRLS*QMCSQPPFLYK
Trigger: CTTATACAGGAATGGAGGCTGTGAACACATCTGCCAAGAGAGCCTGGGCACAGCTCGGTGTTTGTGTCGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000197713.2
ENSMUST00000199615.5
CDS CCA 72 bp CACCATTCGTACCATCCGCAGGCAGACTCCCATTCTTaGGGTCTTGGTGTTTCTCTAGGACCACAAACCAAG +
Preference number: 6 (lower is better)
Translates to: HHSYHPQADSHS*GLGVSLGPQTK
Trigger: CTTGGTTTGTGGTCCTAGAGAAACACCAAGACCCCAAGAATGGGAGTCTGCCTGCGGATGGTACGAATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS CAA 72 bp GGGCTTCAGCATGCTGCCTTGAAGACGTACCCTGTTTaGGCCAGTCCTCTTGTTCACCCTTATTACCGATGG +
Preference number: 6 (lower is better)
Translates to: GLQHAALKTYPV*ASPLVHPYYRW
Trigger: CCATCGGTAATAAGGGTGAACAAGAGGACTGGCCAAAACAGGGTACGTCTTCAAGGCAGCATGCTGAAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS CAA 72 bp CTCCATTCCTGTATAAGCAGGGATCTGCACCTGGTTTaGCCAATGGATGGACCACAACCAGTGACGAGGGCT +
Preference number: 6 (lower is better)
Translates to: LHSCISRDLHLV*PMDGPQPVTRA
Trigger: AGCCCTCGTCACTGGTTGTGGTCCATCCATTGGCAAAACCAGGTGCAGATCCCTGCTTATACAGGAATGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS CAA 72 bp GCACCATTCGTACCATCCGCAGGCAGACTCCCATTCTaGGGGTCTTGGTGTTTCTCTAGGACCACAAACCAA +
Preference number: 6 (lower is better)
Translates to: APFVPSAGRLPF*GSWCFSRTTNQ
Trigger: TTGGTTTGTGGTCCTAGAGAAACACCAAGACCCCAAGAATGGGAGTCTGCCTGCGGATGGTACGAATGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS CAA 90 bp TCTACTACTGCACCATTCGTACCATCCGCAGGCAGACTCCCATTCTaGGGGTCTTGGTGTTTCTCTAGGACCACAAACCAAGGTTGGGGA +
Preference number: 6 (lower is better)
Translates to: STTAPFVPSAGRLPF*GSWCFSRTTNQGWG
Trigger: TCCCCAACCTTGGTTTGTGGTCCTAGAGAAACACCAAGACCCCAAGAATGGGAGTCTGCCTGCGGATGGTACGAATGGTGCAGTAGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS TCA 72 bp TCTGCTGAGATGCCAGCATCCACCACCAATTGCTGGTaGTTTGTTCCATCTGGGTCAATCCGAGAGATGCTC +
Preference number: 6 (lower is better)
Translates to: SAEMPASTTNCW*FVPSGSIREML
Trigger: GAGCATCTCTCGGATTGACCCAGATGGAACAAATCACCAGCAATTGGTGGTGGATGCTGGCATCTCAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS TCA 72 bp AAGACAGATCTGGCTGCATCCACCATTGTCAGGCGATaGACAACCAGTGCAAGTCTTCCCATCTCTCCCAAG +
Preference number: 6 (lower is better)
Translates to: KTDLAASTIVRR*TTSASLPISPK
Trigger: CTTGGGAGAGATGGGAAGACTTGCACTGGTTGTTCATCGCCTGACAATGGTGGATGCAGCCAGATCTGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS CAA 90 bp CCATGTCTGCTGAGATGCCAGCATCCACCACCAATTGCTGGTGATTaGTTCCATCTGGGTCAATCCGAGAGATGCTCTTTCCTTGTGAGA +
Preference number: 6 (lower is better)
Translates to: PCLLRCQHPPPIAGD*FHLGQSERCSFLVR
Trigger: TCTCACAAGGAAAGAGCATCTCTCGGATTGACCCAGATGGAACAAATCACCAGCAATTGGTGGTGGATGCTGGCATCTCAGCAGACATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS GCA 72 bp GCTGGTGATTTGTTCCATCTGGGTCAATCCGAGAGATaGTCTTTCCTTGTGAGAAAACTAGGAAGGGGGCAG +
Preference number: 6 (lower is better)
Translates to: AGDLFHLGQSER*SFLVRKLGRGQ
Trigger: CTGCCCCCTTCCTAGTTTTCTCACAAGGAAAGAGCATCTCTCGGATTGACCCAGATGGAACAAATCACCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS CCA 72 bp GGTCTACCCAGAGAACTTCATCATCTATCCAGTCTATaGCCAGCCCAGACACCTTCCTCTCTACATTGCACA +
Preference number: 6 (lower is better)
Translates to: GLPRELHHLSSL*PAQTPSSLHCT
Trigger: TGTGCAATGTAGAGAGGAAGGTGTCTGGGCTGGCCATAGACTGGATAGATGATGAAGTTCTCTGGGTAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS CCA 72 bp ACTACCATCAGTTTTCCAGGTGTCACAAAGGATGGATaGAGGTTAATCCTGACCGTGTCCTTCCCCGTGTGT +
Preference number: 6 (lower is better)
Translates to: TTISFPGVTKDG*RLILTVSFPVC
Trigger: ACACACGGGGAAGGACACGGTCAGGATTAACCTCCATCCATCCTTTGTGACACCTGGAAAACTGATGGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS CCA 72 bp GTGTACTACCATCAGTTTTCCAGGTGTCACAAAGGATaGATGGAGGTTAATCCTGACCGTGTCCTTCCCCGT +
Preference number: 6 (lower is better)
Translates to: VYYHQFSRCHKG*MEVNPDRVLPR
Trigger: ACGGGGAAGGACACGGTCAGGATTAACCTCCATCCATCCTTTGTGACACCTGGAAAACTGATGGTAGTACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS CAA 72 bp CTGAGATGCCAGCATCCACCACCAATTGCTGGTGATTaGTTCCATCTGGGTCAATCCGAGAGATGCTCTTTC +
Preference number: 6 (lower is better)
Translates to: LRCQHPPPIAGD*FHLGQSERCSF
Trigger: GAAAGAGCATCTCTCGGATTGACCCAGATGGAACAAATCACCAGCAATTGGTGGTGGATGCTGGCATCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS CAA 72 bp CAGTCTATGGCCAGCCCAGACACCTTCCTCTCTACATaGCACACTTTCTCTAGTCCTGTCCCGTTAAGGAAA +
Preference number: 6 (lower is better)
Translates to: QSMASPDTFLST*HTFSSPVPLRK
Trigger: TTTCCTTAACGGGACAGGACTAGAGAAAGTGTGCAATGTAGAGAGGAAGGTGTCTGGGCTGGCCATAGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS CAA 72 bp CTCCATTCCTGTATAAGCAGGGATCTGCACCCTGTTTaGGCCAGTCCTCTTGTTCACCCTTATTACCGATGG +
Preference number: 6 (lower is better)
Translates to: LHSCISRDLHPV*ASPLVHPYYRW
Trigger: CCATCGGTAATAAGGGTGAACAAGAGGACTGGCCAAAACAGGGTGCAGATCCCTGCTTATACAGGAATGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197713.2
CDS TCA 72 bp TGTCCAGTGATTCAATATGCATGCACACGCCACCATTaGGGCAGTATCCATCATATGAGGATGGGCATCCTG +
Preference number: 6 (lower is better)
Translates to: CPVIQYACTRHH*GSIHHMRMGIL
Trigger: CAGGATGCCCATCCTCATATGATGGATACTGCCTCAATGGTGGCGTGTGCATGCATATTGAATCACTGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS GCA 72 bp ATGTCAGGACACAGCCATGACTGCACTTTGATACGTTaGCTGGGCAGGAAACAAGTTCGTGACATTGTTTCC +
Preference number: 6 (lower is better)
Translates to: MSGHSHDCTLIR*LGRKQVRDIVS
Trigger: GGAAACAATGTCACGAACTTGTTTCCTGCCCAGGCAACGTATCAAAGTGCAGTCATGGCTGTGTCCTGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS CCA 72 bp AGCGTATCTACTCCTTCTGTGATCAGTCTTTCTCGCTaGGACCCATCCATATTAGCCCTCTCTATCCACTTC +
Preference number: 6 (lower is better)
Translates to: SVSTPSVISLSR*DPSILALSIHF
Trigger: GAAGTGGATAGAGAGGGCTAATATGGATGGGTCCCAGCGAGAAAGACTGATCACAGAAGGAGTAGATACGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000197713.2
ENSMUST00000199615.5
CDS CAA 72 bp AGGTTAATCCTGACCGTGTCCTTCCCCGTGTGTTTGTaGGCTATCCAAATCGCCTTGCTTTTCAACACTGAG +
Preference number: 6 (lower is better)
Translates to: RLILTVSFPVCL*AIQIALLFNTE
Trigger: CTCAGTGTTGAAAAGCAAGGCGATTTGGATAGCCAACAAACACACGGGGAAGGACACGGTCAGGATTAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS CAA 72 bp TGGAGGTTAATCCTGACCGTGTCCTTCCCCGTGTGTTaGTTGGCTATCCAAATCGCCTTGCTTTTCAACACT +
Preference number: 6 (lower is better)
Translates to: WRLILTVSFPVC*LAIQIALLFNT
Trigger: AGTGTTGAAAAGCAAGGCGATTTGGATAGCCAACAAACACACGGGGAAGGACACGGTCAGGATTAACCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS CAA 72 bp CTGTCCAGTGATTCAATATGCATGCACACGCCACCATaGAGGCAGTATCCATCATATGAGGATGGGCATCCT +
Preference number: 6 (lower is better)
Translates to: LSSDSICMHTPP*RQYPSYEDGHP
Trigger: AGGATGCCCATCCTCATATGATGGATACTGCCTCAATGGTGGCGTGTGCATGCATATTGAATCACTGGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS CAA 90 bp TCATCTATCCAGTCTATGGCCAGCCCAGACACCTTCCTCTCTACATaGCACACTTTCTCTAGTCCTGTCCCGTTAAGGAAAACTCTTAGC +
Preference number: 6 (lower is better)
Translates to: SSIQSMASPDTFLST*HTFSSPVPLRKTLS
Trigger: GCTAAGAGTTTTCCTTAACGGGACAGGACTAGAGAAAGTGTGCAATGTAGAGAGGAAGGTGTCTGGGCTGGCCATAGACTGGATAGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS CAA 90 bp TGTAGTCTGTTCCATCAAAATGCATGTGTCGGATGTCCTGGGAATTaGCAAACAGTAAAAGTGGCTGTGGTCCTGAAGCTGCACAGCTCT +
Preference number: 6 (lower is better)
Translates to: CSLFHQNACVGCPGN*QTVKVAVVLKLHSS
Trigger: AGAGCTGTGCAGCTTCAGGACCACAGCCACTTTTACTGTTTGCAAATTCCCAGGACATCCGACACATGCATTTTGATGGAACAGACTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS TCA 72 bp AGTGTTTTTACATCAACACCTTTGAGGTGTGCTCTGTaGAGGCTGCCGGTCACCTCTGAAGACCAAAACATC +
Preference number: 6 (lower is better)
Translates to: SVFTSTPLRCAL*RLPVTSEDQNI
Trigger: GATGTTTTGGTCTTCAGAGGTGACCGGCAGCCTTCACAGAGCACACCTCAAAGGTGTTGATGTAAAAACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS GCA 72 bp CCTTCCCCGTGTGTTTGTTGGCTATCCAAATCGCCTTaGTTTTCAACACTGAGTAGAAGATCCGATCACCAA +
Preference number: 6 (lower is better)
Translates to: PSPCVCWLSKSP*FSTLSRRSDHQ
Trigger: TTGGTGATCGGATCTTCTACTCAGTGTTGAAAAGCAAGGCGATTTGGATAGCCAACAAACACACGGGGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS CCA 72 bp CACACTCATCTATATCAGAACACAGGTTTCCATCCCTaGCAAACCCTTTCAGACACTGACACTCAGCAGTCT +
Preference number: 6 (lower is better)
Translates to: HTHLYQNTGFHP*QTLSDTDTQQS
Trigger: AGACTGCTGAGTGTCAGTGTCTGAAAGGGTTTGCCAGGGATGGAAACCTGTGTTCTGATATAGATGAGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS CAA 72 bp CCCTGTCATATCTGTTACGGTGATGACTCCGTTCTGTaGGTCTACCCAGAGAACTTCATCATCTATCCAGTC +
Preference number: 6 (lower is better)
Translates to: PCHICYGDDSVL*VYPENFIIYPV
Trigger: GACTGGATAGATGATGAAGTTCTCTGGGTAGACCAACAGAACGGAGTCATCACCGTAACAGATATGACAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS CAA 90 bp GGAATTTTTCCCTGTCATATCTGTTACGGTGATGACTCCGTTCTGTaGGTCTACCCAGAGAACTTCATCATCTATCCAGTCTATGGCCAG +
Preference number: 6 (lower is better)
Translates to: GIFPCHICYGDDSVL*VYPENFIIYPVYGQ
Trigger: CTGGCCATAGACTGGATAGATGATGAAGTTCTCTGGGTAGACCAACAGAACGGAGTCATCACCGTAACAGATATGACAGGGAAAAATTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS TCA 72 bp CACACCAGTACAAAGTGTCTGTTAAGTAGTCAATCGTaGTTCCACTGGGTTCCAGTAGATTGGAGCTGGCTA +
Preference number: 6 (lower is better)
Translates to: HTSTKCLLSSQS*FHWVPVDWSWL
Trigger: TAGCCAGCTCCAATCTACTGGAACCCAGTGGAATCACGATTGACTACTTAACAGACACTTTGTACTGGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000197713.2
ENSMUST00000199615.5
CDS TCA 72 bp GACCACAGTCATCTTCATAGTTCATGCCTGACACCATaGTTTCAGCCACTAGTGTGGAAGATTCTGTCCCAT +
Preference number: 6 (lower is better)
Translates to: DHSHLHSSCLTP*FQPLVWKILSH
Trigger: ATGGGACAGAATCTTCCACACTAGTGGCTGAAATCATGGTGTCAGGCATGAACTATGAAGATGACTGTGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000199615.5
CDS CCA 72 bp CCTGTCATATCTGTTACGGTGATGACTCCGTTCTGTTaGTCTACCCAGAGAACTTCATCATCTATCCAGTCT +
Preference number: 6 (lower is better)
Translates to: PVISVTVMTPFC*STQRTSSSIQS
Trigger: AGACTGGATAGATGATGAAGTTCTCTGGGTAGACCAACAGAACGGAGTCATCACCGTAACAGATATGACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS CAA 72 bp TTCCATCAAAATGCATGTGTCGGATGTCCTGGGAATTaGCAAACAGTAAAAGTGGCTGTGGTCCTGAAGCTG +
Preference number: 6 (lower is better)
Translates to: FHQNACVGCPGN*QTVKVAVVLKL
Trigger: CAGCTTCAGGACCACAGCCACTTTTACTGTTTGCAAATTCCCAGGACATCCGACACATGCATTTTGATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7
CDS TCA 72 bp CATAATCCAAGGCAAAAACCATTCCCATCTGCCGGCTaGGCAGAACTTTGTAGTCTGTTCCATCAAAATGCA +
Preference number: 6 (lower is better)
Translates to: HNPRQKPFPSAG*AELCSLFHQNA
Trigger: TGCATTTTGATGGAACAGACTACAAAGTTCTGCTCAGCCGGCAGATGGGAATGGTTTTTGCCTTGGATTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000197713.2
ENSMUST00000199615.5
CDS CCA 72 bp AGCCATCCAGATTGGCCATTTCAATCACAGACCTCTTaGTGTCACACCAGTACAAAGTGTCTGTTAAGTAGT +
Preference number: 6 (lower is better)
Translates to: SHPDWPFQSQTS*CHTSTKCLLSS
Trigger: ACTACTTAACAGACACTTTGTACTGGTGTGACACCAAGAGGTCTGTGATTGAAATGGCCAATCTGGATGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000029653.7
ENSMUST00000197079.5
ENSMUST00000197713.2
ENSMUST00000199615.5
CDS CAA 72 bp AAAACATCAACCTCTCTATTGGATCCACTGCTATATTaGACGGATGTTTTAAGGAACTTAGAAGAACTCGGG +
Preference number: 6 (lower is better)
Translates to: KTSTSLLDPLLY*TDVLRNLEELG
Trigger: CCCGAGTTCTTCTAAGTTCCTTAAAACATCCGTCAAATATAGCAGTGGATCCAATAGAGAGGTTGATGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000029653.7