RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EFR3B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020658

Ensembl transcript IDs: ENSMUST00000111178.2, ENSMUST00000218166.2, ENSMUST00000219331.2

Found 444 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GATGCTACGCAGCCAGGACACAGACTCACCACACTCGTGCTTTGCTaGAGCTGCCACCCAGTCTGGGAGACCCAGCCCCTCTCCATCCCC +
Preference number: 1 (lower is better)
Translates to: DATQPGHRLTTLVLC*SCHPVWETQPLSIP
Trigger: GGGGATGGAGAGGGGCTGGGTCTCCCAGACTGGGTGGCAGCTTCAGCAAAGCACGAGTGTGGTGAGTCTGTGTCCTGGCTGCGTAGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR TCA 90 bp GCTGCTCCCCGGCCTCCACTCGCTGTGCTTCTTTTCCCTGCCTTGTaGTGGAGGGACAGATCCTCCTGCACCCACCATCTAGACTTCCTG +
Preference number: 1 (lower is better)
Translates to: AAPRPPLAVLLFPAL*WRDRSSCTHHLDFL
Trigger: CAGGAAGTCTAGATGGTGGGTGCAGGAGGATCTGTCCCTCCATCACAAGGCAGGGAAAAGAAGCACAGCGAGTGGAGGCCGGGGAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR GCA 90 bp TGCTGGGCTCAGAAGATCTCCGTGCTCCCTGAGGAGCCAGGCTGGTaGCCAGAATCACGATCAGGGCCTCCCATGATTTCCCTCTGCAGT +
Preference number: 1 (lower is better)
Translates to: CWAQKISVLPEEPGW*PESRSGPPMISLCS
Trigger: ACTGCAGAGGGAAATCATGGGAGGCCCTGATCGTGATTCTGGGCACCAGCCTGGCTCCTCAGGGAGCACGGAGATCTTCTGAGCCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR GCA 90 bp CCATGTGAGTGGTGTTGGGGTGTTGTCCTCAGGGACCTGAGATCATaGAGGCCATGCTGGAGCCGTGAGCCCGTAGCTCAGTGCAGAGAA +
Preference number: 1 (lower is better)
Translates to: PCEWCWGVVLRDLRS*RPCWSREPVAQCRE
Trigger: TTCTCTGCACTGAGCTACGGGCTCACGGCTCCAGCATGGCCTGCATGATCTCAGGTCCCTGAGGACAACACCCCAACACCACTCACATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR CCA 90 bp CCACTTGCTCAACTGCCTGCCTCTCTCTCAAGCCCTCACTACTGCTaGGAGCATCTTCCAGAGGAAGTGATGCAGACAGGCCTCAGGGCC +
Preference number: 1 (lower is better)
Translates to: PLAQLPASLSSPHYC*EHLPEEVMQTGLRA
Trigger: GGCCCTGAGGCCTGTCTGCATCACTTCCTCTGGAAGATGCTCCCAGCAGTAGTGAGGGCTTGAGAGAGAGGCAGGCAGTTGAGCAAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR GCA 90 bp TGGTGTTGGGGTGTTGTCCTCAGGGACCTGAGATCATGCAGGCCATaGTGGAGCCGTGAGCCCGTAGCTCAGTGCAGAGAACATGGGAAA +
Preference number: 1 (lower is better)
Translates to: WCWGVVLRDLRSCRP*WSREPVAQCREHGK
Trigger: TTTCCCATGTTCTCTGCACTGAGCTACGGGCTCACGGCTCCAGCATGGCCTGCATGATCTCAGGTCCCTGAGGACAACACCCCAACACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR CCA 90 bp TGTTGGGGTGTTGTCCTCAGGGACCTGAGATCATGCAGGCCATGCTaGAGCCGTGAGCCCGTAGCTCAGTGCAGAGAACATGGGAAAGAG +
Preference number: 1 (lower is better)
Translates to: CWGVVLRDLRSCRPC*SREPVAQCREHGKE
Trigger: CTCTTTCCCATGTTCTCTGCACTGAGCTACGGGCTCACGGCTCCAGCATGGCCTGCATGATCTCAGGTCCCTGAGGACAACACCCCAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR CCA 90 bp GGGTTGAGCAGTAGCCACACAGCTCCAAAGCCATGTGAGTGGTGTTaGGGTGTTGTCCTCAGGGACCTGAGATCATGCAGGCCATGCTGG +
Preference number: 1 (lower is better)
Translates to: GLSSSHTAPKPCEWC*GVVLRDLRSCRPCW
Trigger: CCAGCATGGCCTGCATGATCTCAGGTCCCTGAGGACAACACCCCAACACCACTCACATGGCTTTGGAGCTGTGTGGCTACTGCTCAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR GCA 90 bp GAGAAGACCCACCCCAAGCTTCCTCTGGACAGAGATGTGGGAAGATaGTACGCAGCCAGGACACAGACTCACCACACTCGTGCTTTGCTG +
Preference number: 1 (lower is better)
Translates to: EKTHPKLPLDRDVGR*YAARTQTHHTRALL
Trigger: CAGCAAAGCACGAGTGTGGTGAGTCTGTGTCCTGGCTGCGTAGCATCTTCCCACATCTCTGTCCAGAGGAAGCTTGGGGTGGGTCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR GCA 90 bp GCTTTCTGGAACTTCTCTACCACCTGTCTCTGCCGCTCACGCTCCTaGTCCTCAACCGCCACACTGTCCACAATGGCCTTCTTCAGTGTC +
Preference number: 1 (lower is better)
Translates to: AFWNFSTTCLCRSRS*SSTATLSTMAFFSV
Trigger: GACACTGAAGAAGGCCATTGTGGACAGTGTGGCGGTTGAGGAGCAGGAGCGTGAGCGGCAGAGACAGGTGGTAGAGAAGTTCCAGAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219331.2
3UTR CCA 90 bp GAGAACCAGAGAAGACCCACCCCAAGCTTCCTCTGGACAGAGATGTaGGAAGATGCTACGCAGCCAGGACACAGACTCACCACACTCGTG +
Preference number: 1 (lower is better)
Translates to: ENQRRPTPSFLWTEM*EDATQPGHRLTTLV
Trigger: CACGAGTGTGGTGAGTCTGTGTCCTGGCTGCGTAGCATCTTCCCACATCTCTGTCCAGAGGAAGCTTGGGGTGGGTCTTCTCTGGTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR GCA 90 bp ATTTCCTCAAAGGGCGCTTTCTGGAACTTCTCTACCACCTGTCTCTaGCGCTCACGCTCCTGCTCCTCAACCGCCACACTGTCCACAATG +
Preference number: 1 (lower is better)
Translates to: ISSKGAFWNFSTTCL*RSRSCSSTATLSTM
Trigger: CATTGTGGACAGTGTGGCGGTTGAGGAGCAGGAGCGTGAGCGGCAGAGACAGGTGGTAGAGAAGTTCCAGAAAGCGCCCTTTGAGGAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219331.2
3UTR TCA 90 bp TCTGTCAGTAGGATGTCACTCTCTAGGCCAGAGCCCTGGGTGCTTTaGTCATGGGGGTGGGGTAGGGACTGCTTGGCCTTAATAGGTTTG +
Preference number: 1 (lower is better)
Translates to: SVSRMSLSRPEPWVL*SWGWGRDCLALIGL
Trigger: CAAACCTATTAAGGCCAAGCAGTCCCTACCCCACCCCCATGATCAAAGCACCCAGGGCTCTGGCCTAGAGAGTGACATCCTACTGACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR TCA 90 bp GGCAGAGCCTGTCTGAATTGTAGCCGCTGCCTCCCAGGACCTCACTaGTTTTGCTCTGGCGGAAGAGAAACTCGATCACCACACCATCTA +
Preference number: 1 (lower is better)
Translates to: GRACLNCSRCLPGPH*FCSGGRETRSPHHL
Trigger: TAGATGGTGTGGTGATCGAGTTTCTCTTCCGCCAGAGCAAAATCAGTGAGGTCCTGGGAGGCAGCGGCTACAATTCAGACAGGCTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000219331.2
3UTR TCA 90 bp ATCTTCATCTGTCAGCTGAGGGATGTACGGCAGGCAGAGCCTGTCTaGATTGTAGCCGCTGCCTCCCAGGACCTCACTGATTTTGCTCTG +
Preference number: 1 (lower is better)
Translates to: IFICQLRDVRQAEPV*IVAAASQDLTDFAL
Trigger: CAGAGCAAAATCAGTGAGGTCCTGGGAGGCAGCGGCTACAATTCAGACAGGCTCTGCCTGCCGTACATCCCTCAGCTGACAGATGAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000219331.2
3UTR CCA 90 bp AAACTTGGGTTGAGCAGTAGCCACACAGCTCCAAAGCCATGTGAGTaGTGTTGGGGTGTTGTCCTCAGGGACCTGAGATCATGCAGGCCA +
Preference number: 1 (lower is better)
Translates to: KLGLSSSHTAPKPCE*CWGVVLRDLRSCRP
Trigger: TGGCCTGCATGATCTCAGGTCCCTGAGGACAACACCCCAACACCACTCACATGGCTTTGGAGCTGTGTGGCTACTGCTCAACCCAAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR TCA 90 bp TTTGACCAACCATGTGGATATCAGGCTCCTTTCTTTGGGAGTGGCTaGCACTCCCTCATAGACACATCCCCAATGGAGGCTTCCCAGGCC +
Preference number: 1 (lower is better)
Translates to: FDQPCGYQAPFFGSG*HSLIDTSPMEASQA
Trigger: GGCCTGGGAAGCCTCCATTGGGGATGTGTCTATGAGGGAGTGTCAGCCACTCCCAAAGAAAGGAGCCTGATATCCACATGGTTGGTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR TCA 90 bp TGTTGTCCTCAGGGACCTGAGATCATGCAGGCCATGCTGGAGCCGTaGGCCCGTAGCTCAGTGCAGAGAACATGGGAAAGAGTTGTATTA +
Preference number: 1 (lower is better)
Translates to: CCPQGPEIMQAMLEP*ARSSVQRTWERVVL
Trigger: TAATACAACTCTTTCCCATGTTCTCTGCACTGAGCTACGGGCTCACGGCTCCAGCATGGCCTGCATGATCTCAGGTCCCTGAGGACAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR GCA 90 bp AGAGCAGACATCACTTCTGAGCTTTCACAGGGTCATTTCCCCAGGTaGCACCTCTGCCCTCCTTTGACCAACCATGTGGATATCAGGCTC +
Preference number: 1 (lower is better)
Translates to: RADITSELSQGHFPR*HLCPPLTNHVDIRL
Trigger: GAGCCTGATATCCACATGGTTGGTCAAAGGAGGGCAGAGGTGGCACCTGGGGAAATGACCCTGTGAAAGCTCAGAAGTGATGTCTGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR TCA 90 bp GGTGAGAGACAGACATATCTGTGTGGGCCTGGAGGCATCTGGTTCTaGTGCTGGCTCTCAAAAGACTCCAAGGAAGTGTCTCTCCCAATC +
Preference number: 1 (lower is better)
Translates to: GERQTYLCGPGGIWF*CWLSKDSKEVSLPI
Trigger: GATTGGGAGAGACACTTCCTTGGAGTCTTTTGAGAGCCAGCATCAGAACCAGATGCCTCCAGGCCCACACAGATATGTCTGTCTCTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR TCA 90 bp CAACCGCCACACTGTCCACAATGGCCTTCTTCAGTGTCTCATAGGTaGTCTCTTCTGCAGGAACTCGCTCCTCTTTTTCTGGGCTGTTCC +
Preference number: 1 (lower is better)
Translates to: QPPHCPQWPSSVSHR*SLLQELAPLFLGCS
Trigger: GGAACAGCCCAGAAAAAGAGGAGCGAGTTCCTGCAGAAGAGATCACCTATGAGACACTGAAGAAGGCCATTGTGGACAGTGTGGCGGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000219331.2
3UTR CCA 90 bp ATACAAGAGAAGACAGGTCAGATGCTTATTAGCCCAGAGGAGAGGTaGCTGGACTCTTCTCACGGAAGACGACAAGGAGGAAGGAGGACC +
Preference number: 1 (lower is better)
Translates to: IQEKTGQMLISPEER*LDSSHGRRQGGRRT
Trigger: GGTCCTCCTTCCTCCTTGTCGTCTTCCGTGAGAAGAGTCCAGCCACCTCTCCTCTGGGCTAATAAGCATCTGACCTGTCTTCTCTTGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR TCA 90 bp ACTCGCTCCTCTTTTTCTGGGCTGTTCCTGGATTCCACCTCTACCTaGAGGGAAATGGTCTCTCCAATGCTCTTCCTCTTGGACAAGCGA +
Preference number: 1 (lower is better)
Translates to: TRSSFSGLFLDSTST*REMVSPMLFLLDKR
Trigger: TCGCTTGTCCAAGAGGAAGAGCATTGGAGAGACCATTTCCCTTCAGGTAGAGGTGGAATCCAGGAACAGCCCAGAAAAAGAGGAGCGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000219331.2
3UTR GCA 90 bp ATCACTTCTGAGCTTTCACAGGGTCATTTCCCCAGGTGCCACCTCTaGCCTCCTTTGACCAACCATGTGGATATCAGGCTCCTTTCTTTG +
Preference number: 1 (lower is better)
Translates to: ITSELSQGHFPRCHL*PPLTNHVDIRLLSL
Trigger: CAAAGAAAGGAGCCTGATATCCACATGGTTGGTCAAAGGAGGGCAGAGGTGGCACCTGGGGAAATGACCCTGTGAAAGCTCAGAAGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR CCA 90 bp AGACACATCCCCAATGGAGGCTTCCCAGGCCCTTCTGCTTCTCAATaGAGATGTCCTTGTGATTCTCTGTCCCTGGCTGATACAAGAGAA +
Preference number: 1 (lower is better)
Translates to: RHIPNGGFPGPSASQ*RCPCDSLSLADTRE
Trigger: TTCTCTTGTATCAGCCAGGGACAGAGAATCACAAGGACATCTCCATTGAGAAGCAGAAGGGCCTGGGAAGCCTCCATTGGGGATGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR CCA 90 bp ACGTATGGGAAGTTTGAAAGGGAAAAGATGGACTATCTTGGACCGTaGAGTATGCCCACTGCTAGGCATTCTGAGAGGCACGGAGACACC +
Preference number: 1 (lower is better)
Translates to: TYGKFEREKMDYLGP*SMPTARHSERHGDT
Trigger: GGTGTCTCCGTGCCTCTCAGAATGCCTAGCAGTGGGCATACTCCACGGTCCAAGATAGTCCATCTTTTCCCTTTCAAACTTCCCATACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR GCA 90 bp ACTGTCCACAATGGCCTTCTTCAGTGTCTCATAGGTGATCTCTTCTaGAGGAACTCGCTCCTCTTTTTCTGGGCTGTTCCTGGATTCCAC +
Preference number: 1 (lower is better)
Translates to: TVHNGLLQCLIGDLF*RNSLLFFWAVPGFH
Trigger: GTGGAATCCAGGAACAGCCCAGAAAAAGAGGAGCGAGTTCCTGCAGAAGAGATCACCTATGAGACACTGAAGAAGGCCATTGTGGACAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000219331.2
3UTR TCA 90 bp CAGCCACGGCATGAAGAAAAAGAAATACTTAGACCGAGCAGCCATTaGTTCTGCAGACATGAACGCTGTGCCTTTCTTCTGTTCCCAGGG +
Preference number: 1 (lower is better)
Translates to: QPRHEEKEILRPSSH*FCRHERCAFLLFPG
Trigger: CCCTGGGAACAGAAGAAAGGCACAGCGTTCATGTCTGCAGAATCAATGGCTGCTCGGTCTAAGTATTTCTTTTTCTTCATGCCGTGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR GCA 90 bp TGGATTCTGGTTTACAATAGGGAAAGAGAACAGAATTTGAGACAGTaGGATCAGACACCAGGGGCTAGAAAAGCATGGGCACTGGGCTGC +
Preference number: 1 (lower is better)
Translates to: WILVYNREREQNLRQ*DQTPGARKAWALGC
Trigger: GCAGCCCAGTGCCCATGCTTTTCTAGCCCCTGGTGTCTGATCGCACTGTCTCAAATTCTGTTCTCTTTCCCTATTGTAAACCAGAATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR TCA 90 bp TTCATGCTTAAACTTGCCTTCAAGGCCATGCTTATAAACTTGGGTTaGGCAGTAGCCACACAGCTCCAAAGCCATGTGAGTGGTGTTGGG +
Preference number: 1 (lower is better)
Translates to: FMLKLAFKAMLINLG*AVATQLQSHVSGVG
Trigger: CCCAACACCACTCACATGGCTTTGGAGCTGTGTGGCTACTGCTCAACCCAAGTTTATAAGCATGGCCTTGAAGGCAAGTTTAAGCATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR TCA 90 bp GGCTCCTTTGGATTCTGGTTTACAATAGGGAAAGAGAACAGAATTTaGGACAGTGCGATCAGACACCAGGGGCTAGAAAAGCATGGGCAC +
Preference number: 1 (lower is better)
Translates to: GSFGFWFTIGKENRI*DSAIRHQGLEKHGH
Trigger: GTGCCCATGCTTTTCTAGCCCCTGGTGTCTGATCGCACTGTCTCAAATTCTGTTCTCTTTCCCTATTGTAAACCAGAATCCAAAGGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR GCA 90 bp GTTAAATCTTTCTTTCCCCAAATTCTAAAGTGCCACTTGCTCAACTaGCTGCCTCTCTCTCAAGCCCTCACTACTGCTGGGAGCATCTTC +
Preference number: 1 (lower is better)
Translates to: VKSFFPQILKCHLLN*LPLSQALTTAGSIF
Trigger: GAAGATGCTCCCAGCAGTAGTGAGGGCTTGAGAGAGAGGCAGGCAGTTGAGCAAGTGGCACTTTAGAATTTGGGGAAAGAAAGATTTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR CCA 90 bp ATTCTGAGACAACCCCAACATCACCATTCTCCTGCAGTTAGTGTGTaGCAGCCACAGTTTAGAAGGCTAAGTCTTGTTGTTGGACACCTT +
Preference number: 1 (lower is better)
Translates to: ILRQPQHHHSPAVSV*QPQFRRLSLVVGHL
Trigger: AAGGTGTCCAACAACAAGACTTAGCCTTCTAAACTGTGGCTGCCACACACTAACTGCAGGAGAATGGTGATGTTGGGGTTGTCTCAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000219331.2
3UTR CCA 90 bp CTAGAACCAGCTAGCTTGCTCAGCTTTCTCTCATCCCAGAGGCTGTaGAAACAAAGACATCAGGGACCAAACTTAACAACTAGGAAACAT +
Preference number: 1 (lower is better)
Translates to: LEPASLLSFLSSQRL*KQRHQGPNLTTRKH
Trigger: ATGTTTCCTAGTTGTTAAGTTTGGTCCCTGATGTCTTTGTTTCCACAGCCTCTGGGATGAGAGAAAGCTGAGCAAGCTAGCTGGTTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR CCA 90 bp AAGTGTCTCTCCCAATCCACAACTAGGGTTAAGGTGTCTCAGGGGTaGACAATGACATCAGTGGGGAACAATAAAGAAACTAATGGACTC +
Preference number: 1 (lower is better)
Translates to: KCLSQSTTRVKVSQG*TMTSVGNNKETNGL
Trigger: GAGTCCATTAGTTTCTTTATTGTTCCCCACTGATGTCATTGTCCACCCCTGAGACACCTTAACCCTAGTTGTGGATTGGGAGAGACACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR TCA 90 bp TCTCCCAATCCACAACTAGGGTTAAGGTGTCTCAGGGGTGGACAATaGCATCAGTGGGGAACAATAAAGAAACTAATGGACTCTTACTCT +
Preference number: 1 (lower is better)
Translates to: SPNPQLGLRCLRGGQ*HQWGTIKKLMDSYS
Trigger: AGAGTAAGAGTCCATTAGTTTCTTTATTGTTCCCCACTGATGTCATTGTCCACCCCTGAGACACCTTAACCCTAGTTGTGGATTGGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR CCA 90 bp CTTCTGGATCAGGCATTTTCTCTTAATCTACTGTTTACACTTTTATaGTCAACCACGTTAACTCCTAACCCTAAACACACTCCCACCTGC +
Preference number: 1 (lower is better)
Translates to: LLDQAFSLNLLFTLL*STTLTPNPKHTPTC
Trigger: GCAGGTGGGAGTGTGTTTAGGGTTAGGAGTTAACGTGGTTGACCATAAAAGTGTAAACAGTAGATTAAGAGAAAATGCCTGATCCAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR GCA 90 bp AAGAGTTGTATTACAAATGGGAAACTCTGGGGAAAGGGTCAGGAGTaGCCCATCTGTGATATTTATCACATATGCAACGAAAAGTACATG +
Preference number: 1 (lower is better)
Translates to: KSCITNGKLWGKGQE*PICDIYHICNEKYM
Trigger: CATGTACTTTTCGTTGCATATGTGATAAATATCACAGATGGGGCACTCCTGACCCTTTCCCCAGAGTTTCCCATTTGTAATACAACTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR TCA 90 bp TGGGCTCAGAAGATCTCCGTGCTCCCTGAGGAGCCAGGCTGGTGCCCAGAATCATTCTCCGGCTTTGCGTaGAGGTGGGAGCCAGAGGGG +
Preference number: 2 (lower is better)
Translates to: WAQKISVLPEEPGWCPESFSGFA*RWEPEG
Trigger: CCCCTCTGGCTCCCACCTTCACGCAAAGCCGGAGAA...TGATTCTGGGCACCAGCCTGGCTCCTCAGGGAGCACGGAGATCTTCTGAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR CCA 90 bp GAGTGGTGTTGGGGTGTTGTCCTCAGGGACCTGAGATCATGCAGGCCATGCTGGAGCTGCCACCCAGTCTaGGAGACCCAGCCCCTCTCC +
Preference number: 2 (lower is better)
Translates to: EWCWGVVLRDLRSCRPCWSCHPV*ETQPLS
Trigger: GGAGAGGGGCTGGGTCTCCCAGACTGGGTGGCAGCT...CCAGCATGGCCTGCATGATCTCAGGTCCCTGAGGACAACACCCCAACACCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR TCA 90 bp TGGGCTCAGAAGATCTCCGTGCTCCCTGAGGAGCCAGGCTGGTGCCCAGAATCAGGGATATGGCTGCTCTaGCCAGGGTCCTTGGTCCCA +
Preference number: 2 (lower is better)
Translates to: WAQKISVLPEEPGWCPESGIWLL*PGSLVP
Trigger: TGGGACCAAGGACCCTGGTCAGAGCAGCCATATCCC...TGATTCTGGGCACCAGCCTGGCTCCTCAGGGAGCACGGAGATCTTCTGAGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR CCA 90 bp TGGGCTCAGAAGATCTCCGTGCTCCCTGAGGAGCCAGGCTGGTGCCCAGAATCACCATGTGAGTGGTGTTaGGGTGTTGTCCTCAGGGAC +
Preference number: 2 (lower is better)
Translates to: WAQKISVLPEEPGWCPESPCEWC*GVVLRD
Trigger: GTCCCTGAGGACAACACCCCAACACCACTCACATGG...TGATTCTGGGCACCAGCCTGGCTCCTCAGGGAGCACGGAGATCTTCTGAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR TCA 90 bp AACTGGAAGGCACCACGACCCAGGGACCCTCAAGAAGTCTGGGGCTTCTTTTCAGGGATATGGCTGCTCTaGCCAGGGTCCTTGGTCCCA +
Preference number: 2 (lower is better)
Translates to: NWKAPRPRDPQEVWGFFSGIWLL*PGSLVP
Trigger: TGGGACCAAGGACCCTGGTCAGAGCAGCCATATCCC...TGAAAAGAAGCCCCAGACTTCTTGAGGGTCCCTGGGTCGTGGTGCCTTCCAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR GCA 90 bp ACCCCAAGCTTCCTCTGGACAGAGATGTGGGAAGATGCTACGCAGCCAGGACACGGTCATTTCCCCAGGTaGCACCTCTGCCCTCCTTTG +
Preference number: 2 (lower is better)
Translates to: TPSFLWTEMWEDATQPGHGHFPR*HLCPPL
Trigger: CAAAGGAGGGCAGAGGTGGCACCTGGGGAAATGACC...GTGTCCTGGCTGCGTAGCATCTTCCCACATCTCTGTCCAGAGGAAGCTTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR GCA 90 bp CAGACTCCAGTCATTAAGAGTTCAGAAAGGGCAAGTGCTGGGCTCAGAAGATCTGCATGGGCACTGGGCTaGTCCCCGGCCTCCACTCGC +
Preference number: 2 (lower is better)
Translates to: QTPVIKSSERASAGLRRSAWALG*SPASTR
Trigger: GCGAGTGGAGGCCGGGGAGCAGCCCAGTGCCCATGC...AGATCTTCTGAGCCCAGCACTTGCCCTTTCTGAACTCTTAATGACTGGAGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR CCA 90 bp CAGGACACAGACTCACCACACTCGTGCTTTGCTGAAGCTGCCACCCAGTCTGGGCAGAGGAGAGGTGGCTaGACTCTTCTCACGGAAGAC +
Preference number: 2 (lower is better)
Translates to: QDTDSPHSCFAEAATQSGQRRGG*TLLTED
Trigger: GTCTTCCGTGAGAAGAGTCCAGCCACCTCTCCTCTG...CCCAGACTGGGTGGCAGCTTCAGCAAAGCACGAGTGTGGTGAGTCTGTGTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR CCA 90 bp CCCAGAATCACGATCAGGGCCTCCCATGATTTCCCTCTGCAGTCTTTAGACAAGAGCTGCCACCCAGTCTaGGAGACCCAGCCCCTCTCC +
Preference number: 2 (lower is better)
Translates to: PRITIRASHDFPLQSLDKSCHPV*ETQPLS
Trigger: GGAGAGGGGCTGGGTCTCCCAGACTGGGTGGCAGCT...CTTGTCTAAAGACTGCAGAGGGAAATCATGGGAGGCCCTGATCGTGATTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR TCA 90 bp CCCAGAATCACGATCAGGGCCTCCCATGATTTCCCTCTGCAGTCTTTAGACAAGTTCTCCGGCTTTGCGTaGAGGTGGGAGCCAGAGGGG +
Preference number: 2 (lower is better)
Translates to: PRITIRASHDFPLQSLDKFSGFA*RWEPEG
Trigger: CCCCTCTGGCTCCCACCTTCACGCAAAGCCGGAGAA...CTTGTCTAAAGACTGCAGAGGGAAATCATGGGAGGCCCTGATCGTGATTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR GCA 90 bp CAGGACACAGACTCACCACACTCGTGCTTTGCTGAAGCTGCCACCCAGTCTGGGCTTCCCAGGCCCTTCTaGTTCTCAATGGAGATGTCC +
Preference number: 2 (lower is better)
Translates to: QDTDSPHSCFAEAATQSGLPRPF*FSMEMS
Trigger: GGACATCTCCATTGAGAAGCAGAAGGGCCTGGGAAG...CCCAGACTGGGTGGCAGCTTCAGCAAAGCACGAGTGTGGTGAGTCTGTGTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR TCA 90 bp AACTGGAAGGCACCACGACCCAGGGACCCTCAAGAAGTCTGGGGCTTCTTTTCACTTTTCCCTGCCTTGTaGTGGAGGGACAGATCCTCC +
Preference number: 2 (lower is better)
Translates to: NWKAPRPRDPQEVWGFFSLFPAL*WRDRSS
Trigger: GGAGGATCTGTCCCTCCATCACAAGGCAGGGAAAAG...TGAAAAGAAGCCCCAGACTTCTTGAGGGTCCCTGGGTCGTGGTGCCTTCCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR GCA 90 bp GAGTGGTGTTGGGGTGTTGTCCTCAGGGACCTGAGATCATGCAGGCCATGCTGGCCAGAGAGGACCTTTTaGTCACTGTCCAAGGTGACA +
Preference number: 2 (lower is better)
Translates to: EWCWGVVLRDLRSCRPCWPERTF*SLSKVT
Trigger: TGTCACCTTGGACAGTGAGCAAAAGGTCCTCTCTGG...CCAGCATGGCCTGCATGATCTCAGGTCCCTGAGGACAACACCCCAACACCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR GCA 90 bp TGGGGGTGGGGTAGGGACTGCTTGGCCTTAATAGGTTTGTTGGCTCCTTTGGATCCCAGGTGCCACCTCTaGCCTCCTTTGACCAACCAT +
Preference number: 2 (lower is better)
Translates to: WGWGRDCLALIGLLAPLDPRCHL*PPLTNH
Trigger: ATGGTTGGTCAAAGGAGGGCAGAGGTGGCACCTGGG...ATCCAAAGGAGCCAACAAACCTATTAAGGCCAAGCAGTCCCTACCCCACCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR GCA 90 bp TGGGGGTGGGGTAGGGACTGCTTGGCCTTAATAGGTTTGTTGGCTCCTTTGGATGGTCATTTCCCCAGGTaGCACCTCTGCCCTCCTTTG +
Preference number: 2 (lower is better)
Translates to: WGWGRDCLALIGLLAPLDGHFPR*HLCPPL
Trigger: CAAAGGAGGGCAGAGGTGGCACCTGGGGAAATGACC...ATCCAAAGGAGCCAACAAACCTATTAAGGCCAAGCAGTCCCTACCCCACCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR CCA 90 bp TCTTTTCCCTGCCTTGTGATGGAGGGACAGATCCTCCTGCACCCACCATCTAGAAGCCCAGAGGAGAGGTaGCTGGACTCTTCTCACGGA +
Preference number: 2 (lower is better)
Translates to: SFPCLVMEGQILLHPPSRSPEER*LDSSHG
Trigger: TCCGTGAGAAGAGTCCAGCCACCTCTCCTCTGGGCT...TCTAGATGGTGGGTGCAGGAGGATCTGTCCCTCCATCACAAGGCAGGGAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR CCA 90 bp TGGGCTCAGAAGATCTCCGTGCTCCCTGAGGAGCCAGGCTGGTGCCCAGAATCATCATCCCAGAGGCTGTaGAAACAAAGACATCAGGGA +
Preference number: 2 (lower is better)
Translates to: WAQKISVLPEEPGWCPESSSQRL*KQRHQG
Trigger: TCCCTGATGTCTTTGTTTCCACAGCCTCTGGGATGA...TGATTCTGGGCACCAGCCTGGCTCCTCAGGGAGCACGGAGATCTTCTGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR CCA 90 bp CTGACTCTGAGGCATACTTGGTCACGATCAGATTCCATTTCCTGTCAACAGGCAGCACCCACCCAGTCCTaGGTCAGCTGCTCCCAGCAC +
Preference number: 2 (lower is better)
Translates to: LTLRHTWSRSDSISCQQAAPTQS*VSCSQH
Trigger: GTGCTGGGAGCAGCTGACCCAGGACTGGGTGGGTGC...TGCCTGTTGACAGGAAATGGAATCTGATCGTGACCAAGTATGCCTCAGAGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR CCA 90 bp TGGGCTCAGAAGATCTCCGTGCTCCCTGAGGAGCCAGGCTGGTGCCCAGAATCAGACCCTCAAGAAGTCTaGGGCTTCTTTTCAGGAAGT +
Preference number: 2 (lower is better)
Translates to: WAQKISVLPEEPGWCPESDPQEV*GFFSGS
Trigger: ACTTCCTGAAAAGAAGCCCCAGACTTCTTGAGGGTC...TGATTCTGGGCACCAGCCTGGCTCCTCAGGGAGCACGGAGATCTTCTGAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR CAA 90 bp GAGCTTTCACAGGGTCATTTCCCCAGGTGCCACCTCTGCCCTCCTTaGACCAACCATGTGGATATCAGGCTCCTTTCTTTGGGAGTGGCT +
Preference number: 2 (lower is better)
Translates to: ELSQGHFPRCHLCPP*TNHVDIRLLSLGVA
Trigger: AGCCACTCCCAAAGAAAGGAGCCTGATATCCACATGGTTGGTCAAAGGAGGGCAGAGGTGGCACCTGGGGAAATGACCCTGTGAAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR TCA 90 bp TGGGCTCAGAAGATCTCCGTGCTCCCTGAGGAGCCAGGCTGGTGCCCAGAATCAAAATGGAAGCCAAAGTaGTTCCTAACACCTCTACCC +
Preference number: 2 (lower is better)
Translates to: WAQKISVLPEEPGWCPESKWKPK*FLTPLP
Trigger: GGGTAGAGGTGTTAGGAATCACTTTGGCTTCCATTT...TGATTCTGGGCACCAGCCTGGCTCCTCAGGGAGCACGGAGATCTTCTGAGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR TCA 90 bp TGGGCTCAGAAGATCTCCGTGCTCCCTGAGGAGCCAGGCTGGTGCCCAGAATCAGAGCAATGTTGGTCCTaGGAGAAAAACAGCTTGGAA +
Preference number: 2 (lower is better)
Translates to: WAQKISVLPEEPGWCPESEQCWS*EKNSLE
Trigger: TTCCAAGCTGTTTTTCTCTCAGGACCAACATTGCTC...TGATTCTGGGCACCAGCCTGGCTCCTCAGGGAGCACGGAGATCTTCTGAGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR TCA 90 bp AACTGGAAGGCACCACGACCCAGGGACCCTCAAGAAGTCTGGGGCTTCTTTTCAAGACCGAGCAGCCATTaGTTCTGCAGACATGAACGC +
Preference number: 2 (lower is better)
Translates to: NWKAPRPRDPQEVWGFFSRPSSH*FCRHER
Trigger: GCGTTCATGTCTGCAGAATCAATGGCTGCTCGGTCT...TGAAAAGAAGCCCCAGACTTCTTGAGGGTCCCTGGGTCGTGGTGCCTTCCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR GCA 90 bp TGGGCTCAGAAGATCTCCGTGCTCCCTGAGGAGCCAGGCTGGTGCCCAGAATCAGGAAAGGGTCAGGAGTaGCCCATCTGTGATATTTAT +
Preference number: 2 (lower is better)
Translates to: WAQKISVLPEEPGWCPESGKGQE*PICDIY
Trigger: ATAAATATCACAGATGGGGCACTCCTGACCCTTTCC...TGATTCTGGGCACCAGCCTGGCTCCTCAGGGAGCACGGAGATCTTCTGAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR CCA 90 bp AGCTGCTCCCAGCACACCAAGTCACATAGGGACAGGGAGGTAGCACATAGGGAACTCTGGACAGAGATGTaGGAAGATGCTACGCAGCCA +
Preference number: 2 (lower is better)
Translates to: SCSQHTKSHRDREVAHRELWTEM*EDATQP
Trigger: TGGCTGCGTAGCATCTTCCCACATCTCTGTCCAGAG...TTCCCTATGTGCTACCTCCCTGTCCCTATGTGACTTGGTGTGCTGGGAGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR CCA 90 bp AGCTGCTCCCAGCACACCAAGTCACATAGGGACAGGGAGGTAGCACATAGGGAAAGCCCTCACTACTGCTaGGAGCATCTTCCAGAGGAA +
Preference number: 2 (lower is better)
Translates to: SCSQHTKSHRDREVAHRESPHYC*EHLPEE
Trigger: TTCCTCTGGAAGATGCTCCCAGCAGTAGTGAGGGCT...TTCCCTATGTGCTACCTCCCTGTCCCTATGTGACTTGGTGTGCTGGGAGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR CCA 90 bp CCAGGGACCCTCAAGAAGTCTGGGGCTTCTTTTCAGGAAGTCAAGAGTCTTAAGTCATGCAGGCCATGCTaGAGCCGTGAGCCCGTAGCT +
Preference number: 2 (lower is better)
Translates to: PGTLKKSGASFQEVKSLKSCRPC*SREPVA
Trigger: AGCTACGGGCTCACGGCTCCAGCATGGCCTGCATGA...CTTAAGACTCTTGACTTCCTGAAAAGAAGCCCCAGACTTCTTGAGGGTCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR CAA 90 bp TGGAGCCGTGAGCCCGTAGCTCAGTGCAGAGAACATGGGAAAGAGTaGTATTACAAATGGGAAACTCTGGGGAAAGGGTCAGGAGTGCCC +
Preference number: 2 (lower is better)
Translates to: WSREPVAQCREHGKE*YYKWETLGKGSGVP
Trigger: GGGCACTCCTGACCCTTTCCCCAGAGTTTCCCATTTGTAATACAACTCTTTCCCATGTTCTCTGCACTGAGCTACGGGCTCACGGCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR TCA 90 bp CAGGACACAGACTCACCACACTCGTGCTTTGCTGAAGCTGCCACCCAGTCTGGGAGCAGACATCACTTCTaGGCTTTCACAGGGTCATTT +
Preference number: 2 (lower is better)
Translates to: QDTDSPHSCFAEAATQSGSRHHF*AFTGSF
Trigger: AAATGACCCTGTGAAAGCTCAGAAGTGATGTCTGCT...CCCAGACTGGGTGGCAGCTTCAGCAAAGCACGAGTGTGGTGAGTCTGTGTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR TCA 90 bp CCATGTGCCAGACTCCAGTCATTAAGAGTTCAGAAAGGGCAAGTGCTGGGCTCATTGTCCTCAGGGACCTaGGATCATGCAGGCCATGCT +
Preference number: 2 (lower is better)
Translates to: PCARLQSLRVQKGQVLGSLSSGT*DHAGHA
Trigger: AGCATGGCCTGCATGATCTCAGGTCCCTGAGGACAA...TGAGCCCAGCACTTGCCCTTTCTGAACTCTTAATGACTGGAGTCTGGCACATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR TCA 90 bp CTGAAGGGAAATGGTCTCTCCAATGCTCTTCCTCTTGGACAAGCGATCTTCATCCAGGCAGAGCCTGTCTaGATTGTAGCCGCTGCCTCC +
Preference number: 2 (lower is better)
Translates to: LKGNGLSNALPLGQAIFIQAEPV*IVAAAS
Trigger: GGAGGCAGCGGCTACAATTCAGACAGGCTCTGCCTG...GATGAAGATCGCTTGTCCAAGAGGAAGAGCATTGGAGAGACCATTTCCCTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219331.2
3UTR-3UTR GCA 90 bp TTCTTCTGTTCCCAGGGCAAGGTGAGAGACAGACATATCTGTGTGGGCCTGGAGCTTCCCAGGCCCTTCTaGTTCTCAATGGAGATGTCC +
Preference number: 2 (lower is better)
Translates to: FFCSQGKVRDRHICVGLELPRPF*FSMEMS
Trigger: GGACATCTCCATTGAGAAGCAGAAGGGCCTGGGAAG...CTCCAGGCCCACACAGATATGTCTGTCTCTCACCTTGCCCTGGGAACAGAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR GCA 90 bp TGGGCTCAGAAGATCTCCGTGCTCCCTGAGGAGCCAGGCTGGTGCCCAGAATCAGAATTCTTGCTTTGGTaGAATCTGCTTGCTGGAGAA +
Preference number: 2 (lower is better)
Translates to: WAQKISVLPEEPGWCPESEFLLW*NLLAGE
Trigger: TTCTCCAGCAAGCAGATTGCACCAAAGCAAGAATTC...TGATTCTGGGCACCAGCCTGGCTCCTCAGGGAGCACGGAGATCTTCTGAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR GCA 90 bp CAGACTCCAGTCATTAAGAGTTCAGAAAGGGCAAGTGCTGGGCTCAGAAGATCTGAGGAGCCAGGCTGGTaGCCAGAATCACGATCAGGG +
Preference number: 2 (lower is better)
Translates to: QTPVIKSSERASAGLRRSEEPGW*PESRSG
Trigger: CCCTGATCGTGATTCTGGGCACCAGCCTGGCTCCTC...AGATCTTCTGAGCCCAGCACTTGCCCTTTCTGAACTCTTAATGACTGGAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR CCA 90 bp TGGGGGTGGGGTAGGGACTGCTTGGCCTTAATAGGTTTGTTGGCTCCTTTGGATCTCTGGACAGAGATGTaGGAAGATGCTACGCAGCCA +
Preference number: 2 (lower is better)
Translates to: WGWGRDCLALIGLLAPLDLWTEM*EDATQP
Trigger: TGGCTGCGTAGCATCTTCCCACATCTCTGTCCAGAG...ATCCAAAGGAGCCAACAAACCTATTAAGGCCAAGCAGTCCCTACCCCACCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR CCA 90 bp TGGGCTCAGAAGATCTCCGTGCTCCCTGAGGAGCCAGGCTGGTGCCCAGAATCATTGAAAGGGAAAAGATaGACTATCTTGGACCGTGGA +
Preference number: 2 (lower is better)
Translates to: WAQKISVLPEEPGWCPESLKGKR*TILDRG
Trigger: TCCACGGTCCAAGATAGTCCATCTTTTCCCTTTCAA...TGATTCTGGGCACCAGCCTGGCTCCTCAGGGAGCACGGAGATCTTCTGAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR CCA 90 bp TGGGCTCAGAAGATCTCCGTGCTCCCTGAGGAGCCAGGCTGGTGCCCAGAATCAAACAGCAGCTGCTTCTaGATCAGGCATTTTCTCTTA +
Preference number: 2 (lower is better)
Translates to: WAQKISVLPEEPGWCPESNSSCF*IRHFLL
Trigger: TAAGAGAAAATGCCTGATCCAGAAGCAGCTGCTGTT...TGATTCTGGGCACCAGCCTGGCTCCTCAGGGAGCACGGAGATCTTCTGAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR TCA 90 bp GTCCACAATGGCCTTCTTCAGTGTCTCATAGGTGATCTCTTCTGCAGGAACTCGCTCCCAGGACCTCACTaGTTTTGCTCTGGCGGAAGA +
Preference number: 2 (lower is better)
Translates to: VHNGLLQCLIGDLFCRNSLPGPH*FCSGGR
Trigger: TCTTCCGCCAGAGCAAAATCAGTGAGGTCCTGGGAG...CGAGTTCCTGCAGAAGAGATCACCTATGAGACACTGAAGAAGGCCATTGTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000219331.2
3UTR-3UTR GCA 90 bp TCTTTTCCCTGCCTTGTGATGGAGGGACAGATCCTCCTGCACCCACCATCTAGACCAGAGAGGACCTTTTaGTCACTGTCCAAGGTGACA +
Preference number: 2 (lower is better)
Translates to: SFPCLVMEGQILLHPPSRPERTF*SLSKVT
Trigger: TGTCACCTTGGACAGTGAGCAAAAGGTCCTCTCTGG...TCTAGATGGTGGGTGCAGGAGGATCTGTCCCTCCATCACAAGGCAGGGAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR GCA 90 bp CCAGGGACCCTCAAGAAGTCTGGGGCTTCTTTTCAGGAAGTCAAGAGTCTTAAGGGCCTCCACTCGCTGTaGTTCTTTTCCCTGCCTTGT +
Preference number: 2 (lower is better)
Translates to: PGTLKKSGASFQEVKSLKGLHSL*FFSLPC
Trigger: ACAAGGCAGGGAAAAGAAGCACAGCGAGTGGAGGCC...CTTAAGACTCTTGACTTCCTGAAAAGAAGCCCCAGACTTCTTGAGGGTCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR GCA 90 bp TGGGGGTGGGGTAGGGACTGCTTGGCCTTAATAGGTTTGTTGGCTCCTTTGGATCAGAATTTGAGACAGTaGGATCAGACACCAGGGGCT +
Preference number: 2 (lower is better)
Translates to: WGWGRDCLALIGLLAPLDQNLRQ*DQTPGA
Trigger: AGCCCCTGGTGTCTGATCGCACTGTCTCAAATTCTG...ATCCAAAGGAGCCAACAAACCTATTAAGGCCAAGCAGTCCCTACCCCACCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR CCA 90 bp TCCCTACTACACAGCCACGGCATGAAGAAAAAGAAATACTTAGACCGAGCAGCCAGCCCAGAGGAGAGGTaGCTGGACTCTTCTCACGGA +
Preference number: 2 (lower is better)
Translates to: SLLHSHGMKKKKYLDRAASPEER*LDSSHG
Trigger: TCCGTGAGAAGAGTCCAGCCACCTCTCCTCTGGGCT...GGCTGCTCGGTCTAAGTATTTCTTTTTCTTCATGCCGTGGCTGTGTAGTAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR CCA 90 bp CAGGACACAGACTCACCACACTCGTGCTTTGCTGAAGCTGCCACCCAGTCTGGGCCTTCTGCTTCTCAATaGAGATGTCCTTGTGATTCT +
Preference number: 2 (lower is better)
Translates to: QDTDSPHSCFAEAATQSGPSASQ*RCPCDS
Trigger: AGAATCACAAGGACATCTCCATTGAGAAGCAGAAGG...CCCAGACTGGGTGGCAGCTTCAGCAAAGCACGAGTGTGGTGAGTCTGTGTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR CCA 90 bp TCTTTTCCCTGCCTTGTGATGGAGGGACAGATCCTCCTGCACCCACCATCTAGAACCCCAAGCTTCCTCTaGACAGAGATGTGGGAAGAT +
Preference number: 2 (lower is better)
Translates to: SFPCLVMEGQILLHPPSRTPSFL*TEMWED
Trigger: ATCTTCCCACATCTCTGTCCAGAGGAAGCTTGGGGT...TCTAGATGGTGGGTGCAGGAGGATCTGTCCCTCCATCACAAGGCAGGGAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR TCA 90 bp AGCTGCTCCCAGCACACCAAGTCACATAGGGACAGGGAGGTAGCACATAGGGAAAGCAGACATCACTTCTaGGCTTTCACAGGGTCATTT +
Preference number: 2 (lower is better)
Translates to: SCSQHTKSHRDREVAHRESRHHF*AFTGSF
Trigger: AAATGACCCTGTGAAAGCTCAGAAGTGATGTCTGCT...TTCCCTATGTGCTACCTCCCTGTCCCTATGTGACTTGGTGTGCTGGGAGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR TCA 90 bp CTGACTCTGAGGCATACTTGGTCACGATCAGATTCCATTTCCTGTCAACAGGCAATCTTCCAGAGGAAGTaGTGCAGACAGGCCTCAGGG +
Preference number: 2 (lower is better)
Translates to: LTLRHTWSRSDSISCQQAIFQRK*CRQASG
Trigger: CCCTGAGGCCTGTCTGCATCACTTCCTCTGGAAGAT...TGCCTGTTGACAGGAAATGGAATCTGATCGTGACCAAGTATGCCTCAGAGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR TCA 90 bp AACTGGAAGGCACCACGACCCAGGGACCCTCAAGAAGTCTGGGGCTTCTTTTCAGAGCAATGTTGGTCCTaGGAGAAAAACAGCTTGGAA +
Preference number: 2 (lower is better)
Translates to: NWKAPRPRDPQEVWGFFSEQCWS*EKNSLE
Trigger: TTCCAAGCTGTTTTTCTCTCAGGACCAACATTGCTC...TGAAAAGAAGCCCCAGACTTCTTGAGGGTCCCTGGGTCGTGGTGCCTTCCAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR TCA 90 bp CCAGGGACCCTCAAGAAGTCTGGGGCTTCTTTTCAGGAAGTCAAGAGTCTTAAGAGCTCCAAAGCCATGTaGGTGGTGTTGGGGTGTTGT +
Preference number: 2 (lower is better)
Translates to: PGTLKKSGASFQEVKSLKSSKAM*VVLGCC
Trigger: ACAACACCCCAACACCACTCACATGGCTTTGGAGCT...CTTAAGACTCTTGACTTCCTGAAAAGAAGCCCCAGACTTCTTGAGGGTCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR GCA 90 bp CCATGTGCCAGACTCCAGTCATTAAGAGTTCAGAAAGGGCAAGTGCTGGGCTCATGTGCTTCTTTTCCCTaGCTTGTGATGGAGGGACAG +
Preference number: 2 (lower is better)
Translates to: PCARLQSLRVQKGQVLGSCASFP*LVMEGQ
Trigger: CTGTCCCTCCATCACAAGGCAGGGAAAAGAAGCACA...TGAGCCCAGCACTTGCCCTTTCTGAACTCTTAATGACTGGAGTCTGGCACATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR CCA 90 bp CAGACTCCAGTCATTAAGAGTTCAGAAAGGGCAAGTGCTGGGCTCAGAAGATCTCAGAGGAGAGGTGGCTaGACTCTTCTCACGGAAGAC +
Preference number: 2 (lower is better)
Translates to: QTPVIKSSERASAGLRRSQRRGG*TLLTED
Trigger: GTCTTCCGTGAGAAGAGTCCAGCCACCTCTCCTCTG...AGATCTTCTGAGCCCAGCACTTGCCCTTTCTGAACTCTTAATGACTGGAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR CCA 90 bp TGGGGGTGGGGTAGGGACTGCTTGGCCTTAATAGGTTTGTTGGCTCCTTTGGATTCATCCCAGAGGCTGTaGAAACAAAGACATCAGGGA +
Preference number: 2 (lower is better)
Translates to: WGWGRDCLALIGLLAPLDSSQRL*KQRHQG
Trigger: TCCCTGATGTCTTTGTTTCCACAGCCTCTGGGATGA...ATCCAAAGGAGCCAACAAACCTATTAAGGCCAAGCAGTCCCTACCCCACCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR CCA 90 bp CTGCAATTTCCTCAAAGGGCGCTTTCTGGAACTTCTCTACCACCTGTCTCTGCCCCTGCAGTTAGTGTGTaGCAGCCACAGTTTAGAAGG +
Preference number: 2 (lower is better)
Translates to: LQFPQRALSGTSLPPVSAPAVSV*QPQFRR
Trigger: CCTTCTAAACTGTGGCTGCCACACACTAACTGCAGG...GGCAGAGACAGGTGGTAGAGAAGTTCCAGAAAGCGCCCTTTGAGGAAATTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000219331.2
3UTR-3UTR TCA 90 bp GCTCAGCTTTCTCTCATCCCAGAGGCTGTGGAAACAAAGACATCAGGGACCAAATTCTTTGGGAGTGGCTaGCACTCCCTCATAGACACA +
Preference number: 2 (lower is better)
Translates to: AQLSLIPEAVETKTSGTKFFGSG*HSLIDT
Trigger: TGTGTCTATGAGGGAGTGTCAGCCACTCCCAAAGAA...TTTGGTCCCTGATGTCTTTGTTTCCACAGCCTCTGGGATGAGAGAAAGCTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR TCA 90 bp TCTTTTCCCTGCCTTGTGATGGAGGGACAGATCCTCCTGCACCCACCATCTAGAAAATGGAAGCCAAAGTaGTTCCTAACACCTCTACCC +
Preference number: 2 (lower is better)
Translates to: SFPCLVMEGQILLHPPSRKWKPK*FLTPLP
Trigger: GGGTAGAGGTGTTAGGAATCACTTTGGCTTCCATTT...TCTAGATGGTGGGTGCAGGAGGATCTGTCCCTCCATCACAAGGCAGGGAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR TCA 90 bp TGGGGGTGGGGTAGGGACTGCTTGGCCTTAATAGGTTTGTTGGCTCCTTTGGATGATGTGGCCGGCAAGTaGAAAAAGACAGTTTTTAGC +
Preference number: 2 (lower is better)
Translates to: WGWGRDCLALIGLLAPLDDVAGK*KKTVFS
Trigger: GCTAAAAACTGTCTTTTTTCACTTGCCGGCCACATC...ATCCAAAGGAGCCAACAAACCTATTAAGGCCAAGCAGTCCCTACCCCACCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR TCA 90 bp CAGACTCCAGTCATTAAGAGTTCAGAAAGGGCAAGTGCTGGGCTCAGAAGATCTGATCAGGGCCTCCCATaGTTTCCCTCTGCAGTCTTT +
Preference number: 2 (lower is better)
Translates to: QTPVIKSSERASAGLRRSDQGLP*FPSAVF
Trigger: AAAGACTGCAGAGGGAAATCATGGGAGGCCCTGATC...AGATCTTCTGAGCCCAGCACTTGCCCTTTCTGAACTCTTAATGACTGGAGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR TCA 90 bp CTGCAATTTCCTCAAAGGGCGCTTTCTGGAACTTCTCTACCACCTGTCTCTGCCTCAGTGTCTCATAGGTaGTCTCTTCTGCAGGAACTC +
Preference number: 2 (lower is better)
Translates to: LQFPQRALSGTSLPPVSASVSHR*SLLQEL
Trigger: GAGTTCCTGCAGAAGAGATCACCTATGAGACACTGA...GGCAGAGACAGGTGGTAGAGAAGTTCCAGAAAGCGCCCTTTGAGGAAATTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219331.2
3UTR-3UTR GCA 90 bp AACTGGAAGGCACCACGACCCAGGGACCCTCAAGAAGTCTGGGGCTTCTTTTCACTTAGAAATGATTCCTaGAGACCACAGAACCACTTC +
Preference number: 2 (lower is better)
Translates to: NWKAPRPRDPQEVWGFFSLRNDS*RPQNHF
Trigger: GAAGTGGTTCTGTGGTCTGCAGGAATCATTTCTAAG...TGAAAAGAAGCCCCAGACTTCTTGAGGGTCCCTGGGTCGTGGTGCCTTCCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR GCA 90 bp TGGGGGTGGGGTAGGGACTGCTTGGCCTTAATAGGTTTGTTGGCTCCTTTGGATGGAAAGGGTCAGGAGTaGCCCATCTGTGATATTTAT +
Preference number: 2 (lower is better)
Translates to: WGWGRDCLALIGLLAPLDGKGQE*PICDIY
Trigger: ATAAATATCACAGATGGGGCACTCCTGACCCTTTCC...ATCCAAAGGAGCCAACAAACCTATTAAGGCCAAGCAGTCCCTACCCCACCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR GCA 90 bp CAGACTCCAGTCATTAAGAGTTCAGAAAGGGCAAGTGCTGGGCTCAGAAGATCTGAGCCCGTAGCTCAGTaGAGAGAACATGGGAAAGAG +
Preference number: 2 (lower is better)
Translates to: QTPVIKSSERASAGLRRSEPVAQ*REHGKE
Trigger: CTCTTTCCCATGTTCTCTGCACTGAGCTACGGGCTC...AGATCTTCTGAGCCCAGCACTTGCCCTTTCTGAACTCTTAATGACTGGAGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR CCA 90 bp CTGACTCTGAGGCATACTTGGTCACGATCAGATTCCATTTCCTGTCAACAGGCAAGCCCTCACTACTGCTaGGAGCATCTTCCAGAGGAA +
Preference number: 2 (lower is better)
Translates to: LTLRHTWSRSDSISCQQASPHYC*EHLPEE
Trigger: TTCCTCTGGAAGATGCTCCCAGCAGTAGTGAGGGCT...TGCCTGTTGACAGGAAATGGAATCTGATCGTGACCAAGTATGCCTCAGAGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR CCA 90 bp AACTGGAAGGCACCACGACCCAGGGACCCTCAAGAAGTCTGGGGCTTCTTTTCAGGCTCCTTTGGATTCTaGTTTACAATAGGGAAAGAG +
Preference number: 2 (lower is better)
Translates to: NWKAPRPRDPQEVWGFFSGSFGF*FTIGKE
Trigger: CTCTTTCCCTATTGTAAACCAGAATCCAAAGGAGCC...TGAAAAGAAGCCCCAGACTTCTTGAGGGTCCCTGGGTCGTGGTGCCTTCCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR CCA 90 bp CCATGTGCCAGACTCCAGTCATTAAGAGTTCAGAAAGGGCAAGTGCTGGGCTCAGACCCTCAAGAAGTCTaGGGCTTCTTTTCAGGAAGT +
Preference number: 2 (lower is better)
Translates to: PCARLQSLRVQKGQVLGSDPQEV*GFFSGS
Trigger: ACTTCCTGAAAAGAAGCCCCAGACTTCTTGAGGGTC...TGAGCCCAGCACTTGCCCTTTCTGAACTCTTAATGACTGGAGTCTGGCACATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR CAA 90 bp CTTGGAAAACGTATGGGAAGTTTGAAAGGGAAAAGATGGACTATCTaGGACCGTGGAGTATGCCCACTGCTAGGCATTCTGAGAGGCACG +
Preference number: 2 (lower is better)
Translates to: LGKRMGSLKGKRWTI*DRGVCPLLGILRGT
Trigger: CGTGCCTCTCAGAATGCCTAGCAGTGGGCATACTCCACGGTCCAAGATAGTCCATCTTTTCCCTTTCAAACTTCCCATACGTTTTCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR TCA 90 bp TCCCTACTACACAGCCACGGCATGAAGAAAAAGAAATACTTAGACCGAGCAGCCTTCTTTGGGAGTGGCTaGCACTCCCTCATAGACACA +
Preference number: 2 (lower is better)
Translates to: SLLHSHGMKKKKYLDRAAFFGSG*HSLIDT
Trigger: TGTGTCTATGAGGGAGTGTCAGCCACTCCCAAAGAA...GGCTGCTCGGTCTAAGTATTTCTTTTTCTTCATGCCGTGGCTGTGTAGTAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR TCA 90 bp TGGGGGTGGGGTAGGGACTGCTTGGCCTTAATAGGTTTGTTGGCTCCTTTGGATAAAGAGAACAGAATTTaGGACAGTGCGATCAGACAC +
Preference number: 2 (lower is better)
Translates to: WGWGRDCLALIGLLAPLDKENRI*DSAIRH
Trigger: GTGTCTGATCGCACTGTCTCAAATTCTGTTCTCTTT...ATCCAAAGGAGCCAACAAACCTATTAAGGCCAAGCAGTCCCTACCCCACCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR GCA 90 bp TTCTTCTGTTCCCAGGGCAAGGTGAGAGACAGACATATCTGTGTGGGCCTGGAGGGTTACTTGCCTTCATaGTTAAACTTGCCTTCAAGG +
Preference number: 2 (lower is better)
Translates to: FFCSQGKVRDRHICVGLEGYLPS*LNLPSR
Trigger: CCTTGAAGGCAAGTTTAAGCATGAAGGCAAGTAACC...CTCCAGGCCCACACAGATATGTCTGTCTCTCACCTTGCCCTGGGAACAGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR CCA 90 bp CTGACTCTGAGGCATACTTGGTCACGATCAGATTCCATTTCCTGTCAACAGGCAACAAATGGGAAACTCTaGGGAAAGGGTCAGGAGTGC +
Preference number: 2 (lower is better)
Translates to: LTLRHTWSRSDSISCQQATNGKL*GKGQEC
Trigger: GCACTCCTGACCCTTTCCCCAGAGTTTCCCATTTGT...TGCCTGTTGACAGGAAATGGAATCTGATCGTGACCAAGTATGCCTCAGAGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR TCA 90 bp TCTTTTCCCTGCCTTGTGATGGAGGGACAGATCCTCCTGCACCCACCATCTAGAAACGTATGGGAAGTTTaGAAGGGAAAAGATGGACTA +
Preference number: 2 (lower is better)
Translates to: SFPCLVMEGQILLHPPSRNVWEV*KGKDGL
Trigger: TAGTCCATCTTTTCCCTTTCAAACTTCCCATACGTT...TCTAGATGGTGGGTGCAGGAGGATCTGTCCCTCCATCACAAGGCAGGGAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR GCA 90 bp GTCCACAATGGCCTTCTTCAGTGTCTCATAGGTGATCTCTTCTGCAGGAACTCGAAATGGTCTCTCCAATaGTCTTCCTCTTGGACAAGC +
Preference number: 2 (lower is better)
Translates to: VHNGLLQCLIGDLFCRNSKWSLQ*SSSWTS
Trigger: GCTTGTCCAAGAGGAAGAGCATTGGAGAGACCATTT...CGAGTTCCTGCAGAAGAGATCACCTATGAGACACTGAAGAAGGCCATTGTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219331.2
3UTR-3UTR CCA 90 bp TCCCTACTACACAGCCACGGCATGAAGAAAAAGAAATACTTAGACCGAGCAGCCTCCTTTCTTTGGGAGTaGCTGACACTCCCTCATAGA +
Preference number: 2 (lower is better)
Translates to: SLLHSHGMKKKKYLDRAASFLWE*LTLPHR
Trigger: TCTATGAGGGAGTGTCAGCCACTCCCAAAGAAAGGA...GGCTGCTCGGTCTAAGTATTTCTTTTTCTTCATGCCGTGGCTGTGTAGTAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR CCA 90 bp CCTCTTGGACAAGCGATCTTCATCTGTCAGCTGAGGGATGTACGGCAGGCAGAGGCTAAGTCTTGTTGTTaGACACCTTTTATTCCATAC +
Preference number: 2 (lower is better)
Translates to: PLGQAIFICQLRDVRQAEAKSCC*TPFIPY
Trigger: GTATGGAATAAAAGGTGTCCAACAACAAGACTTAGC...CTCTGCCTGCCGTACATCCCTCAGCTGACAGATGAAGATCGCTTGTCCAAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000219331.2
3UTR-3UTR TCA 90 bp CCAGGGACCCTCAAGAAGTCTGGGGCTTCTTTTCAGGAAGTCAAGAGTCTTAAGAAAGAGAACAGAATTTaGGACAGTGCGATCAGACAC +
Preference number: 2 (lower is better)
Translates to: PGTLKKSGASFQEVKSLKKENRI*DSAIRH
Trigger: GTGTCTGATCGCACTGTCTCAAATTCTGTTCTCTTT...CTTAAGACTCTTGACTTCCTGAAAAGAAGCCCCAGACTTCTTGAGGGTCCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR TCA 90 bp CTGACTCTGAGGCATACTTGGTCACGATCAGATTCCATTTCCTGTCAACAGGCAGGAGTGCCCCATCTGTaGTATTTATCACATATGCAA +
Preference number: 2 (lower is better)
Translates to: LTLRHTWSRSDSISCQQAGVPHL*YLSHMQ
Trigger: TTGCATATGTGATAAATATCACAGATGGGGCACTCC...TGCCTGTTGACAGGAAATGGAATCTGATCGTGACCAAGTATGCCTCAGAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR GCA 90 bp CAGACTCCAGTCATTAAGAGTTCAGAAAGGGCAAGTGCTGGGCTCAGAAGATCTCTTAGAAATGATTCCTaGAGACCACAGAACCACTTC +
Preference number: 2 (lower is better)
Translates to: QTPVIKSSERASAGLRRSLRNDS*RPQNHF
Trigger: GAAGTGGTTCTGTGGTCTGCAGGAATCATTTCTAAG...AGATCTTCTGAGCCCAGCACTTGCCCTTTCTGAACTCTTAATGACTGGAGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR GCA 90 bp CTGACTCTGAGGCATACTTGGTCACGATCAGATTCCATTTCCTGTCAACAGGCAGGTTACTTGCCTTCATaGTTAAACTTGCCTTCAAGG +
Preference number: 2 (lower is better)
Translates to: LTLRHTWSRSDSISCQQAGYLPS*LNLPSR
Trigger: CCTTGAAGGCAAGTTTAAGCATGAAGGCAAGTAACC...TGCCTGTTGACAGGAAATGGAATCTGATCGTGACCAAGTATGCCTCAGAGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR CCA 90 bp CCATGTGCCAGACTCCAGTCATTAAGAGTTCAGAAAGGGCAAGTGCTGGGCTCAGAGAGAAAAACAGCTTaGAAAACGTATGGGAAGTTT +
Preference number: 2 (lower is better)
Translates to: PCARLQSLRVQKGQVLGSERKTA*KTYGKF
Trigger: AAACTTCCCATACGTTTTCCAAGCTGTTTTTCTCTC...TGAGCCCAGCACTTGCCCTTTCTGAACTCTTAATGACTGGAGTCTGGCACATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR CCA 90 bp CCCAGAATCACGATCAGGGCCTCCCATGATTTCCCTCTGCAGTCTTTAGACAAGTCAGTGCAGAGAACATaGGAAAGAGTTGTATTACAA +
Preference number: 2 (lower is better)
Translates to: PRITIRASHDFPLQSLDKSVQRT*ERVVLQ
Trigger: TTGTAATACAACTCTTTCCCATGTTCTCTGCACTGA...CTTGTCTAAAGACTGCAGAGGGAAATCATGGGAGGCCCTGATCGTGATTCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR TCA 90 bp CTGACTCTGAGGCATACTTGGTCACGATCAGATTCCATTTCCTGTCAACAGGCAAACGTATGGGAAGTTTaGAAGGGAAAAGATGGACTA +
Preference number: 2 (lower is better)
Translates to: LTLRHTWSRSDSISCQQANVWEV*KGKDGL
Trigger: TAGTCCATCTTTTCCCTTTCAAACTTCCCATACGTT...TGCCTGTTGACAGGAAATGGAATCTGATCGTGACCAAGTATGCCTCAGAGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR CCA 90 bp CTGACTCTGAGGCATACTTGGTCACGATCAGATTCCATTTCCTGTCAACAGGCAGAGAGAAAAACAGCTTaGAAAACGTATGGGAAGTTT +
Preference number: 2 (lower is better)
Translates to: LTLRHTWSRSDSISCQQAERKTA*KTYGKF
Trigger: AAACTTCCCATACGTTTTCCAAGCTGTTTTTCTCTC...TGCCTGTTGACAGGAAATGGAATCTGATCGTGACCAAGTATGCCTCAGAGTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR GCA 72 bp CCAGGGTCCTTGGTCCCAGCCTACGTTCTCCGGCTTTaGGTGAAGGTGGGAGCCAGAGGGGGCATTTCTAGG +
Preference number: 3 (lower is better)
Translates to: PGSLVPAYVLRL*VKVGARGGISR
Trigger: CCTAGAAATGCCCCCTCTGGCTCCCACCTTCACGCAAAGCCGGAGAACGTAGGCTGGGACCAAGGACCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR GCA 72 bp TGGTGTTGGGGTGTTGTCCTCAGGGACCTGAGATCATaGAGGCCATGCTGGAGCCGTGAGCCCGTAGCTCAG +
Preference number: 3 (lower is better)
Translates to: WCWGVVLRDLRS*RPCWSREPVAQ
Trigger: CTGAGCTACGGGCTCACGGCTCCAGCATGGCCTGCATGATCTCAGGTCCCTGAGGACAACACCCCAACACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR GCA 72 bp TGCTCCCCGGCCTCCACTCGCTGTGCTTCTTTTCCCTaGCTTGTGATGGAGGGACAGATCCTCCTGCACCCA +
Preference number: 3 (lower is better)
Translates to: CSPASTRCASFP*LVMEGQILLHP
Trigger: TGGGTGCAGGAGGATCTGTCCCTCCATCACAAGGCAGGGAAAAGAAGCACAGCGAGTGGAGGCCGGGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR TCA 72 bp CCATACGCACAGGCAGCATATGGGATATGGCTGCTCTaGCCAGGGTCCTTGGTCCCAGCCTACGTTCTCCGG +
Preference number: 3 (lower is better)
Translates to: PYAQAAYGIWLL*PGSLVPAYVLR
Trigger: CCGGAGAACGTAGGCTGGGACCAAGGACCCTGGTCAGAGCAGCCATATCCCATATGCTGCCTGTGCGTATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR GCA 72 bp CAGAAGATCTCCGTGCTCCCTGAGGAGCCAGGCTGGTaGCCAGAATCACGATCAGGGCCTCCCATGATTTCC +
Preference number: 3 (lower is better)
Translates to: QKISVLPEEPGW*PESRSGPPMIS
Trigger: GGAAATCATGGGAGGCCCTGATCGTGATTCTGGGCACCAGCCTGGCTCCTCAGGGAGCACGGAGATCTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR GCA 72 bp TCAGAAAGGGCAAGTGCTGGGCTCAGAAGATCTCCGTaGTCCCTGAGGAGCCAGGCTGGTGCCCAGAATCAC +
Preference number: 3 (lower is better)
Translates to: SERASAGLRRSP*SLRSQAGAQNH
Trigger: GTGATTCTGGGCACCAGCCTGGCTCCTCAGGGAGCACGGAGATCTTCTGAGCCCAGCACTTGCCCTTTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR GCA 72 bp AAGGGCGCTTTCTGGAACTTCTCTACCACCTGTCTCTaGCGCTCACGCTCCTGCTCCTCAACCGCCACACTG +
Preference number: 3 (lower is better)
Translates to: KGAFWNFSTTCL*RSRSCSSTATL
Trigger: CAGTGTGGCGGTTGAGGAGCAGGAGCGTGAGCGGCAGAGACAGGTGGTAGAGAAGTTCCAGAAAGCGCCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219331.2
3UTR-3UTR CAA 90 bp ACCCCAAGCTTCCTCTGGACAGAGATGTGGGAAGATGCTACGCAGCCAGGACACCACCACACTCGTGCTTaGCTGAAGCTGCCACCCAGT +
Preference number: 3 (lower is better)
Translates to: TPSFLWTEMWEDATQPGHHHTRA*LKLPPS
Trigger: ACTGGGTGGCAGCTTCAGCAAAGCACGAGTGTGGTG...GTGTCCTGGCTGCGTAGCATCTTCCCACATCTCTGTCCAGAGGAAGCTTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR TCA 72 bp CAGGGACCTGAGATCATGCAGGCCATGCTGGAGCCGTaGGCCCGTAGCTCAGTGCAGAGAACATGGGAAAGA +
Preference number: 3 (lower is better)
Translates to: QGPEIMQAMLEP*ARSSVQRTWER
Trigger: TCTTTCCCATGTTCTCTGCACTGAGCTACGGGCTCACGGCTCCAGCATGGCCTGCATGATCTCAGGTCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR TCA 72 bp CGGCCTCCACTCGCTGTGCTTCTTTTCCCTGCCTTGTaGTGGAGGGACAGATCCTCCTGCACCCACCATCTA +
Preference number: 3 (lower is better)
Translates to: RPPLAVLLFPAL*WRDRSSCTHHL
Trigger: TAGATGGTGGGTGCAGGAGGATCTGTCCCTCCATCACAAGGCAGGGAAAAGAAGCACAGCGAGTGGAGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR TCA 72 bp GGTCCTTGGTCCCAGCCTACGTTCTCCGGCTTTGCGTaGAGGTGGGAGCCAGAGGGGGCATTTCTAGGTTTT +
Preference number: 3 (lower is better)
Translates to: GPWSQPTFSGFA*RWEPEGAFLGF
Trigger: AAAACCTAGAAATGCCCCCTCTGGCTCCCACCTTCACGCAAAGCCGGAGAACGTAGGCTGGGACCAAGGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR TCA 72 bp TGTCAGCTGAGGGATGTACGGCAGGCAGAGCCTGTCTaGATTGTAGCCGCTGCCTCCCAGGACCTCACTGAT +
Preference number: 3 (lower is better)
Translates to: CQLRDVRQAEPV*IVAAASQDLTD
Trigger: ATCAGTGAGGTCCTGGGAGGCAGCGGCTACAATTCAGACAGGCTCTGCCTGCCGTACATCCCTCAGCTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219331.2
3UTR GCA 72 bp TCAGTAGGATGTCACTCTCTAGGCCAGAGCCCTGGGTaGTTTGATCATGGGGGTGGGGTAGGGACTGCTTGG +
Preference number: 3 (lower is better)
Translates to: SVGCHSLGQSPG*FDHGGGVGTAW
Trigger: CCAAGCAGTCCCTACCCCACCCCCATGATCAAAGCACCCAGGGCTCTGGCCTAGAGAGTGACATCCTACTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR GCA 72 bp AACTTCTCTACCACCTGTCTCTGCCGCTCACGCTCCTaGTCCTCAACCGCCACACTGTCCACAATGGCCTTC +
Preference number: 3 (lower is better)
Translates to: NFSTTCLCRSRS*SSTATLSTMAF
Trigger: GAAGGCCATTGTGGACAGTGTGGCGGTTGAGGAGCAGGAGCGTGAGCGGCAGAGACAGGTGGTAGAGAAGTT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219331.2
3UTR GCA 72 bp AAGGGCCAAACCAAGATAACTGCAAGTGGCCTTGTTTaGACCCACCCAGTCCTGGGTCAGCTGCTCCCAGCA +
Preference number: 3 (lower is better)
Translates to: KGQTKITASGLV*THPVLGQLLPA
Trigger: TGCTGGGAGCAGCTGACCCAGGACTGGGTGGGTGCAAACAAGGCCACTTGCAGTTATCTTGGTTTGGCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR CCA 72 bp AGAAGACCCACCCCAAGCTTCCTCTGGACAGAGATGTaGGAAGATGCTACGCAGCCAGGACACAGACTCACC +
Preference number: 3 (lower is better)
Translates to: RRPTPSFLWTEM*EDATQPGHRLT
Trigger: GGTGAGTCTGTGTCCTGGCTGCGTAGCATCTTCCCACATCTCTGTCCAGAGGAAGCTTGGGGTGGGTCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR CCA 72 bp CAACTGCCTGCCTCTCTCTCAAGCCCTCACTACTGCTaGGAGCATCTTCCAGAGGAAGTGATGCAGACAGGC +
Preference number: 3 (lower is better)
Translates to: QLPASLSSPHYC*EHLPEEVMQTG
Trigger: GCCTGTCTGCATCACTTCCTCTGGAAGATGCTCCCAGCAGTAGTGAGGGCTTGAGAGAGAGGCAGGCAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR CCA 72 bp AGAGAGAACCAGAGAAGACCCACCCCAAGCTTCCTCTaGACAGAGATGTGGGAAGATGCTACGCAGCCAGGA +
Preference number: 3 (lower is better)
Translates to: RENQRRPTPSFL*TEMWEDATQPG
Trigger: TCCTGGCTGCGTAGCATCTTCCCACATCTCTGTCCAGAGGAAGCTTGGGGTGGGTCTTCTCTGGTTCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR CCA 72 bp AGTAGCCACACAGCTCCAAAGCCATGTGAGTGGTGTTaGGGTGTTGTCCTCAGGGACCTGAGATCATGCAGG +
Preference number: 3 (lower is better)
Translates to: SSHTAPKPCEWC*GVVLRDLRSCR
Trigger: CCTGCATGATCTCAGGTCCCTGAGGACAACACCCCAACACCACTCACATGGCTTTGGAGCTGTGTGGCTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR CAA 90 bp CCATGTGCCAGACTCCAGTCATTAAGAGTTCAGAAAGGGCAAGTGCTGGGCTCACACCACACTCGTGCTTaGCTGAAGCTGCCACCCAGT +
Preference number: 3 (lower is better)
Translates to: PCARLQSLRVQKGQVLGSHHTRA*LKLPPS
Trigger: ACTGGGTGGCAGCTTCAGCAAAGCACGAGTGTGGTG...TGAGCCCAGCACTTGCCCTTTCTGAACTCTTAATGACTGGAGTCTGGCACATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR CCA 72 bp TTGAGCAGTAGCCACACAGCTCCAAAGCCATGTGAGTaGTGTTGGGGTGTTGTCCTCAGGGACCTGAGATCA +
Preference number: 3 (lower is better)
Translates to: LSSSHTAPKPCE*CWGVVLRDLRS
Trigger: TGATCTCAGGTCCCTGAGGACAACACCCCAACACCACTCACATGGCTTTGGAGCTGTGTGGCTACTGCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR CCA 72 bp AGACCAGTAACATATCCCATACGCACAGGCAGCATATaGGATATGGCTGCTCTGACCAGGGTCCTTGGTCCC +
Preference number: 3 (lower is better)
Translates to: RPVTYPIRTGSI*DMAALTRVLGP
Trigger: GGGACCAAGGACCCTGGTCAGAGCAGCCATATCCCATATGCTGCCTGTGCGTATGGGATATGTTACTGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR CAA 90 bp GAGTGGTGTTGGGGTGTTGTCCTCAGGGACCTGAGATCATGCAGGCCATGCTGGATCTCTGGAGCAATGTaGGTCCTGAGAGAAAAACAG +
Preference number: 3 (lower is better)
Translates to: EWCWGVVLRDLRSCRPCWISGAM*VLREKQ
Trigger: CTGTTTTTCTCTCAGGACCAACATTGCTCCAGAGAT...CCAGCATGGCCTGCATGATCTCAGGTCCCTGAGGACAACACCCCAACACCACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR CAA 90 bp CAAAGGGCGCTTTCTGGAACTTCTCTACCACCTGTCTCTGCCGCTCACGCTCCTCCAATGCTCTTCCTCTaGGACAAGCGATCTTCATCT +
Preference number: 3 (lower is better)
Translates to: QRALSGTSLPPVSAAHAPPMLFL*DKRSSS
Trigger: AGATGAAGATCGCTTGTCCAAGAGGAAGAGCATTGG...AGGAGCGTGAGCGGCAGAGACAGGTGGTAGAGAAGTTCCAGAAAGCGCCCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219331.2
3UTR TCA 72 bp CCATGTGGATATCAGGCTCCTTTCTTTGGGAGTGGCTaGCACTCCCTCATAGACACATCCCCAATGGAGGCT +
Preference number: 3 (lower is better)
Translates to: PCGYQAPFFGSG*HSLIDTSPMEA
Trigger: AGCCTCCATTGGGGATGTGTCTATGAGGGAGTGTCAGCCACTCCCAAAGAAAGGAGCCTGATATCCACATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR TCA 72 bp CTTAGCAGCTTTCTCTGTAGCAGGTTGGCAGGTCTATaGCACCAAAAGGACAACTGGAAGGCACCACGACCC +
Preference number: 3 (lower is better)
Translates to: LSSFLCSRLAGL*HQKDNWKAPRP
Trigger: GGGTCGTGGTGCCTTCCAGTTGTCCTTTTGGTGTCATAGACCTGCCAACCTGCTACAGAGAAAGCTGCTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR TCA 72 bp TGTCTGAATTGTAGCCGCTGCCTCCCAGGACCTCACTaGTTTTGCTCTGGCGGAAGAGAAACTCGATCACCA +
Preference number: 3 (lower is better)
Translates to: CLNCSRCLPGPH*FCSGGRETRSP
Trigger: TGGTGATCGAGTTTCTCTTCCGCCAGAGCAAAATCAGTGAGGTCCTGGGAGGCAGCGGCTACAATTCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000219331.2
3UTR TCA 72 bp CTCTTCCTCTTGGACAAGCGATCTTCATCTGTCAGCTaGGGGATGTACGGCAGGCAGAGCCTGTCTGAATTG +
Preference number: 3 (lower is better)
Translates to: LFLLDKRSSSVS*GMYGRQSLSEL
Trigger: CAATTCAGACAGGCTCTGCCTGCCGTACATCCCTCAGCTGACAGATGAAGATCGCTTGTCCAAGAGGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000219331.2
3UTR GCA 72 bp ATCACTTCTGAGCTTTCACAGGGTCATTTCCCCAGGTaGCACCTCTGCCCTCCTTTGACCAACCATGTGGAT +
Preference number: 3 (lower is better)
Translates to: ITSELSQGHFPR*HLCPPLTNHVD
Trigger: ATCCACATGGTTGGTCAAAGGAGGGCAGAGGTGGCACCTGGGGAAATGACCCTGTGAAAGCTCAGAAGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR CCA 72 bp AAGACAGGTCAGATGCTTATTAGCCCAGAGGAGAGGTaGCTGGACTCTTCTCACGGAAGACGACAAGGAGGA +
Preference number: 3 (lower is better)
Translates to: KTGQMLISPEER*LDSSHGRRQGG
Trigger: TCCTCCTTGTCGTCTTCCGTGAGAAGAGTCCAGCCACCTCTCCTCTGGGCTAATAAGCATCTGACCTGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR CCA 72 bp CTGCAGGAACTCGCTCCTCTTTTTCTGGGCTGTTCCTaGATTCCACCTCTACCTGAAGGGAAATGGTCTCTC +
Preference number: 3 (lower is better)
Translates to: LQELAPLFLGCS*IPPLPEGKWSL
Trigger: GAGAGACCATTTCCCTTCAGGTAGAGGTGGAATCCAGGAACAGCCCAGAAAAAGAGGAGCGAGTTCCTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000219331.2
3UTR-3UTR CAA 90 bp CCATGTGCCAGACTCCAGTCATTAAGAGTTCAGAAAGGGCAAGTGCTGGGCTCACTAGAACCAGCTAGCTaGCTCAGCTTTCTCTCATCC +
Preference number: 3 (lower is better)
Translates to: PCARLQSLRVQKGQVLGSLEPAS*LSFLSS
Trigger: GGATGAGAGAAAGCTGAGCAAGCTAGCTGGTTCTAG...TGAGCCCAGCACTTGCCCTTTCTGAACTCTTAATGACTGGAGTCTGGCACATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR TCA 72 bp AACCAAGACTTAAGAGGCGAGAGCAGACATCACTTCTaGGCTTTCACAGGGTCATTTCCCCAGGTGCCACCT +
Preference number: 3 (lower is better)
Translates to: NQDLRGESRHHF*AFTGSFPQVPP
Trigger: AGGTGGCACCTGGGGAAATGACCCTGTGAAAGCTCAGAAGTGATGTCTGCTCTCGCCTCTTAAGTCTTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR TCA 72 bp CAGACATATCTGTGTGGGCCTGGAGGCATCTGGTTCTaGTGCTGGCTCTCAAAAGACTCCAAGGAAGTGTCT +
Preference number: 3 (lower is better)
Translates to: QTYLCGPGGIWF*CWLSKDSKEVS
Trigger: AGACACTTCCTTGGAGTCTTTTGAGAGCCAGCATCAGAACCAGATGCCTCCAGGCCCACACAGATATGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR GCA 72 bp AAAGGGAAAAGATGGACTATCTTGGACCGTGGAGTATaGCCACTGCTAGGCATTCTGAGAGGCACGGAGACA +
Preference number: 3 (lower is better)
Translates to: KGKRWTILDRGV*PLLGILRGTET
Trigger: TGTCTCCGTGCCTCTCAGAATGCCTAGCAGTGGGCATACTCCACGGTCCAAGATAGTCCATCTTTTCCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR CCA 72 bp CCAACCATGTGGATATCAGGCTCCTTTCTTTGGGAGTaGCTGACACTCCCTCATAGACACATCCCCAATGGA +
Preference number: 3 (lower is better)
Translates to: PTMWISGSFLWE*LTLPHRHIPNG
Trigger: TCCATTGGGGATGTGTCTATGAGGGAGTGTCAGCCACTCCCAAAGAAAGGAGCCTGATATCCACATGGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR CAA 90 bp CCATGTGCCAGACTCCAGTCATTAAGAGTTCAGAAAGGGCAAGTGCTGGGCTCACCGAGGACAGAATTCTaGCTTTGGTGCAATCTGCTT +
Preference number: 3 (lower is better)
Translates to: PCARLQSLRVQKGQVLGSPRTEF*LWCNLL
Trigger: AAGCAGATTGCACCAAAGCAAGAATTCTGTCCTCGG...TGAGCCCAGCACTTGCCCTTTCTGAACTCTTAATGACTGGAGTCTGGCACATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR CAA 90 bp GGCCTTCTTCAGTGTCTCATAGGTGATCTCTTCTGCAGGAACTCGCTCCTCTTTAGGACCTCACTGATTTaGCTCTGGCGGAAGAGAAAC +
Preference number: 3 (lower is better)
Translates to: GLLQCLIGDLFCRNSLLFRTSLI*LWRKRN
Trigger: GTTTCTCTTCCGCCAGAGCAAAATCAGTGAGGTCCT...AAAGAGGAGCGAGTTCCTGCAGAAGAGATCACCTATGAGACACTGAAGAAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219331.2
3UTR TCA 72 bp TCTTTTTCTGGGCTGTTCCTGGATTCCACCTCTACCTaGAGGGAAATGGTCTCTCCAATGCTCTTCCTCTTG +
Preference number: 3 (lower is better)
Translates to: SFSGLFLDSTST*REMVSPMLFLL
Trigger: CAAGAGGAAGAGCATTGGAGAGACCATTTCCCTTCAGGTAGAGGTGGAATCCAGGAACAGCCCAGAAAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000219331.2
3UTR TCA 72 bp CACTGTCCACAATGGCCTTCTTCAGTGTCTCATAGGTaGTCTCTTCTGCAGGAACTCGCTCCTCTTTTTCTG +
Preference number: 3 (lower is better)
Translates to: HCPQWPSSVSHR*SLLQELAPLFL
Trigger: CAGAAAAAGAGGAGCGAGTTCCTGCAGAAGAGATCACCTATGAGACACTGAAGAAGGCCATTGTGGACAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000219331.2
3UTR GCA 72 bp AATGGCCTTCTTCAGTGTCTCATAGGTGATCTCTTCTaGAGGAACTCGCTCCTCTTTTTCTGGGCTGTTCCT +
Preference number: 3 (lower is better)
Translates to: NGLLQCLIGDLF*RNSLLFFWAVP
Trigger: AGGAACAGCCCAGAAAAAGAGGAGCGAGTTCCTGCAGAAGAGATCACCTATGAGACACTGAAGAAGGCCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000219331.2
3UTR CCA 72 bp ACCCACCATCTAGACTTCCTGACTCTGAGGCATACTTaGTCACGATCAGATTCCATTTCCTGTCAACAGGCA +
Preference number: 3 (lower is better)
Translates to: THHLDFLTLRHT*SRSDSISCQQA
Trigger: TGCCTGTTGACAGGAAATGGAATCTGATCGTGACCAAGTATGCCTCAGAGTCAGGAAGTCTAGATGGTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR CCA 72 bp GCTTTTCCAATCCTACTTCAGCTGAACTGCATCGTGTaGACCAAGACCAGTAACATATCCCATACGCACAGG +
Preference number: 3 (lower is better)
Translates to: AFPILLQLNCIV*TKTSNISHTHR
Trigger: CCTGTGCGTATGGGATATGTTACTGGTCTTGGTCCACACGATGCAGTTCAGCTGAAGTAGGATTGGAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR CAA 90 bp TCCCTACTACACAGCCACGGCATGAAGAAAAAGAAATACTTAGACCGAGCAGCCGCTTATAAACTTGGGTaGAGCAGTAGCCACACAGCT +
Preference number: 3 (lower is better)
Translates to: SLLHSHGMKKKKYLDRAAAYKLG*SSSHTA
Trigger: AGCTGTGTGGCTACTGCTCAACCCAAGTTTATAAGC...GGCTGCTCGGTCTAAGTATTTCTTTTTCTTCATGCCGTGGCTGTGTAGTAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR CAA 90 bp CCAGGGACCCTCAAGAAGTCTGGGGCTTCTTTTCAGGAAGTCAAGAGTCTTAAGCCTTCATGCTTAAACTaGCCTTCAAGGCCATGCTTA +
Preference number: 3 (lower is better)
Translates to: PGTLKKSGASFQEVKSLKPSCLN*PSRPCL
Trigger: TAAGCATGGCCTTGAAGGCAAGTTTAAGCATGAAGG...CTTAAGACTCTTGACTTCCTGAAAAGAAGCCCCAGACTTCTTGAGGGTCCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR-3UTR CAA 90 bp CCAGGGACCCTCAAGAAGTCTGGGGCTTCTTTTCAGGAAGTCAAGAGTCTTAAGGCCTTAATAGGTTTGTaGGCTCCTTTGGATTCTGGT +
Preference number: 3 (lower is better)
Translates to: PGTLKKSGASFQEVKSLKALIGL*APLDSG
Trigger: ACCAGAATCCAAAGGAGCCAACAAACCTATTAAGGC...CTTAAGACTCTTGACTTCCTGAAAAGAAGCCCCAGACTTCTTGAGGGTCCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR TCA 72 bp AAACTTGCCTTCAAGGCCATGCTTATAAACTTGGGTTaGGCAGTAGCCACACAGCTCCAAAGCCATGTGAGT +
Preference number: 3 (lower is better)
Translates to: KLAFKAMLINLG*AVATQLQSHVS
Trigger: ACTCACATGGCTTTGGAGCTGTGTGGCTACTGCTCAACCCAAGTTTATAAGCATGGCCTTGAAGGCAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR GCA 72 bp CCACACTGCCTACAACCATACCTTAGAAATGATTCCTaGAGACCACAGAACCACTTCCCCTTTACAAGAAGC +
Preference number: 3 (lower is better)
Translates to: PHCLQPYLRNDS*RPQNHFPFTRS
Trigger: GCTTCTTGTAAAGGGGAAGTGGTTCTGTGGTCTGCAGGAATCATTTCTAAGGTATGGTTGTAGGCAGTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR GCA 72 bp AGGTCTCAAAAACTCGGACACACTGAGATGATGGGCTaGAGCATCTATGGGTGTGCACTTTTATACTCCATG +
Preference number: 3 (lower is better)
Translates to: RSQKLGHTEMMG*SIYGCALLYSM
Trigger: CATGGAGTATAAAAGTGCACACCCATAGATGCTGCAGCCCATCATCTCAGTGTGTCCGAGTTTTTGAGACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR GCA 72 bp ATTCCACCTCTACCTGAAGGGAAATGGTCTCTCCAATaGTCTTCCTCTTGGACAAGCGATCTTCATCTGTCA +
Preference number: 3 (lower is better)
Translates to: IPPLPEGKWSLQ*SSSWTSDLHLS
Trigger: TGACAGATGAAGATCGCTTGTCCAAGAGGAAGAGCATTGGAGAGACCATTTCCCTTCAGGTAGAGGTGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219331.2
3UTR CCA 72 bp CAACCCCAACATCACCATTCTCCTGCAGTTAGTGTGTaGCAGCCACAGTTTAGAAGGCTAAGTCTTGTTGTT +
Preference number: 3 (lower is better)
Translates to: QPQHHHSPAVSV*QPQFRRLSLVV
Trigger: AACAACAAGACTTAGCCTTCTAAACTGTGGCTGCCACACACTAACTGCAGGAGAATGGTGATGTTGGGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000219331.2
3UTR GCA 72 bp GTTTACAATAGGGAAAGAGAACAGAATTTGAGACAGTaGGATCAGACACCAGGGGCTAGAAAAGCATGGGCA +
Preference number: 3 (lower is better)
Translates to: VYNREREQNLRQ*DQTPGARKAWA
Trigger: TGCCCATGCTTTTCTAGCCCCTGGTGTCTGATCGCACTGTCTCAAATTCTGTTCTCTTTCCCTATTGTAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR GCA 72 bp TGCAGCATCTATGGGTGTGCACTTTTATACTCCATGTaGCAGACTCCAGTCATTAAGAGTTCAGAAAGGGCA +
Preference number: 3 (lower is better)
Translates to: CSIYGCALLYSM*QTPVIKSSERA
Trigger: TGCCCTTTCTGAACTCTTAATGACTGGAGTCTGGCACATGGAGTATAAAAGTGCACACCCATAGATGCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR CCA 72 bp TCCCAATCCACAACTAGGGTTAAGGTGTCTCAGGGGTaGACAATGACATCAGTGGGGAACAATAAAGAAACT +
Preference number: 3 (lower is better)
Translates to: SQSTTRVKVSQG*TMTSVGNNKET
Trigger: AGTTTCTTTATTGTTCCCCACTGATGTCATTGTCCACCCCTGAGACACCTTAACCCTAGTTGTGGATTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR TCA 72 bp GGATTCTGGTTTACAATAGGGAAAGAGAACAGAATTTaGGACAGTGCGATCAGACACCAGGGGCTAGAAAAG +
Preference number: 3 (lower is better)
Translates to: GFWFTIGKENRI*DSAIRHQGLEK
Trigger: CTTTTCTAGCCCCTGGTGTCTGATCGCACTGTCTCAAATTCTGTTCTCTTTCCCTATTGTAAACCAGAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR GCA 72 bp AGTCTTAAGGCTTTTCCAATCCTACTTCAGCTGAACTaGATCGTGTGGACCAAGACCAGTAACATATCCCAT +
Preference number: 3 (lower is better)
Translates to: SLKAFPILLQLN*IVWTKTSNISH
Trigger: ATGGGATATGTTACTGGTCTTGGTCCACACGATGCAGTTCAGCTGAAGTAGGATTGGAAAAGCCTTAAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR CCA 72 bp AACATGGGAAAGAGTTGTATTACAAATGGGAAACTCTaGGGAAAGGGTCAGGAGTGCCCCATCTGTGATATT +
Preference number: 3 (lower is better)
Translates to: NMGKSCITNGKL*GKGQECPICDI
Trigger: AATATCACAGATGGGGCACTCCTGACCCTTTCCCCAGAGTTTCCCATTTGTAATACAACTCTTTCCCATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR TCA 72 bp CATGAAGAAAAAGAAATACTTAGACCGAGCAGCCATTaGTTCTGCAGACATGAACGCTGTGCCTTTCTTCTG +
Preference number: 3 (lower is better)
Translates to: HEEKEILRPSSH*FCRHERCAFLL
Trigger: CAGAAGAAAGGCACAGCGTTCATGTCTGCAGAATCAATGGCTGCTCGGTCTAAGTATTTCTTTTTCTTCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR TCA 72 bp TCAAGAGTCTTAAGGCTTTTCCAATCCTACTTCAGCTaGACTGCATCGTGTGGACCAAGACCAGTAACATAT +
Preference number: 3 (lower is better)
Translates to: SRVLRLFQSYFS*TASCGPRPVTY
Trigger: ATATGTTACTGGTCTTGGTCCACACGATGCAGTTCAGCTGAAGTAGGATTGGAAAAGCCTTAAGACTCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR GCA 72 bp ATTACAAATGGGAAACTCTGGGGAAAGGGTCAGGAGTaGCCCATCTGTGATATTTATCACATATGCAACGAA +
Preference number: 3 (lower is better)
Translates to: ITNGKLWGKGQE*PICDIYHICNE
Trigger: TTCGTTGCATATGTGATAAATATCACAGATGGGGCACTCCTGACCCTTTCCCCAGAGTTTCCCATTTGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR TCA 72 bp CTAGCTAAGCAGAGGATAGAGGATGTGGCCGGCAAGTaGAAAAAGACAGTTTTTAGCACAAGGCTTAAATTT +
Preference number: 3 (lower is better)
Translates to: LAKQRIEDVAGK*KKTVFSTRLKF
Trigger: AAATTTAAGCCTTGTGCTAAAAACTGTCTTTTTTCACTTGCCGGCCACATCCTCTATCCTCTGCTTAGCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR GCA 72 bp CTAAATTTTATTCCCAGATTCCGAGGACAGAATTCTTaGTTTGGTGCAATCTGCTTGCTGGAGAAGGTCAAA +
Preference number: 3 (lower is better)
Translates to: LNFIPRFRGQNS*FGAICLLEKVK
Trigger: TTTGACCTTCTCCAGCAAGCAGATTGCACCAAAGCAAGAATTCTGTCCTCGGAATCTGGGAATAAAATTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR CCA 72 bp CAGGCATTTTCTCTTAATCTACTGTTTACACTTTTATaGTCAACCACGTTAACTCCTAACCCTAAACACACT +
Preference number: 3 (lower is better)
Translates to: QAFSLNLLFTLL*STTLTPNPKHT
Trigger: AGTGTGTTTAGGGTTAGGAGTTAACGTGGTTGACCATAAAAGTGTAAACAGTAGATTAAGAGAAAATGCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR TCA 90 bp CAGGACACAGACTCACCACACTCGTGCTTTGCTGAAGCTGCCACCCAGTCTGGGGCGCGTAGTCGATGCTaGGCCGCAGCTGCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: QDTDSPHSCFAEAATQSGARSRC*AAAAAA
Trigger: TGCTGCGGCAGCTGCGGCTCAGCATCGACTACGCGC...CCCAGACTGGGTGGCAGCTTCAGCAAAGCACGAGTGTGGTGAGTCTGTGTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp GAGTGGTGTTGGGGTGTTGTCCTCAGGGACCTGAGATCATGCAGGCCATGCTGGCCGCGCTGCGGCTGTTaGCGTCCAGGTGGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: EWCWGVVLRDLRSCRPCWPRCGC*RPGGSG
Trigger: TCCTGAGCCACCTGGACGCCAACAGCCGCAGCGCGG...CCAGCATGGCCTGCATGATCTCAGGTCCCTGAGGACAACACCCCAACACCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR GCA 90 bp CAGGACACAGACTCACCACACTCGTGCTTTGCTGAAGCTGCCACCCAGTCTGGGTGCCGCTCACGCTCCTaGTCCTCAACCGCCACACTG +
Preference number: 4 (lower is better)
Translates to: QDTDSPHSCFAEAATQSGCRSRS*SSTATL
Trigger: CAGTGTGGCGGTTGAGGAGCAGGAGCGTGAGCGGCA...CCCAGACTGGGTGGCAGCTTCAGCAAAGCACGAGTGTGGTGAGTCTGTGTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp AGCTGCTCCCAGCACACCAAGTCACATAGGGACAGGGAGGTAGCACATAGGGAACCGCGCTGCGGCTGTTaGCGTCCAGGTGGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: SCSQHTKSHRDREVAHREPRCGC*RPGGSG
Trigger: TCCTGAGCCACCTGGACGCCAACAGCCGCAGCGCGG...TTCCCTATGTGCTACCTCCCTGTCCCTATGTGACTTGGTGTGCTGGGAGCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR TCA 90 bp CAGGACACAGACTCACCACACTCGTGCTTTGCTGAAGCTGCCACCCAGTCTGGGGACCCACATCTCGGATaGGCCTCTCTGAGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: QDTDSPHSCFAEAATQSGDPHLG*ASLRGR
Trigger: CCTACCTCTCAGAGAGGCTCATCCGAGATGTGGGTC...CCCAGACTGGGTGGCAGCTTCAGCAAAGCACGAGTGTGGTGAGTCTGTGTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111178.2
CDS-3UTR TCA 90 bp ACCCCAAGCTTCCTCTGGACAGAGATGTGGGAAGATGCTACGCAGCCAGGACACCAGGCAGAGCCTGTCTaGATTGTAGCCGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: TPSFLWTEMWEDATQPGHQAEPV*IVAAAS
Trigger: GGAGGCAGCGGCTACAATTCAGACAGGCTCTGCCTG...GTGTCCTGGCTGCGTAGCATCTTCCCACATCTCTGTCCAGAGGAAGCTTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR TCA 90 bp AGCTGCTCCCAGCACACCAAGTCACATAGGGACAGGGAGGTAGCACATAGGGAAGGCCGTAGGCTGCGCTaGTGGTTCCTGAAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: SCSQHTKSHRDREVAHREGRRLR*WFLKGL
Trigger: CAAGCCCTTCAGGAACCATCAGCGCAGCCTACGGCC...TTCCCTATGTGCTACCTCCCTGTCCCTATGTGACTTGGTGTGCTGGGAGCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR GCA 90 bp CCATGTGCCAGACTCCAGTCATTAAGAGTTCAGAAAGGGCAAGTGCTGGGCTCAGCACAGTCGCCGCGCTaGGGCTGTTGGCGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: PCARLQSLRVQKGQVLGSAQSPR*GCWRPG
Trigger: ACCTGGACGCCAACAGCCGCAGCGCGGCGACTGTGC...TGAGCCCAGCACTTGCCCTTTCTGAACTCTTAATGACTGGAGTCTGGCACATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR GCA 90 bp AACTGGAAGGCACCACGACCCAGGGACCCTCAAGAAGTCTGGGGCTTCTTTTCAATAGGACTTCCACGATaGCGGCGCGCACAGTCGCCG +
Preference number: 4 (lower is better)
Translates to: NWKAPRPRDPQEVWGFFSIGLPR*RRAQSP
Trigger: CGGCGACTGTGCGCGCCGGCATCGTGGAAGTCCTAT...TGAAAAGAAGCCCCAGACTTCTTGAGGGTCCCTGGGTCGTGGTGCCTTCCAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR GCA 90 bp AACTGGAAGGCACCACGACCCAGGGACCCTCAAGAAGTCTGGGGCTTCTTTTCAGGCGGTCCAGGAAGTTaGTGGGCAGGGCCGACATCA +
Preference number: 4 (lower is better)
Translates to: NWKAPRPRDPQEVWGFFSGGPGS*WAGPTS
Trigger: TGATGTCGGCCCTGCCCAGCAACTTCCTGGACCGCC...TGAAAAGAAGCCCCAGACTTCTTGAGGGTCCCTGGGTCGTGGTGCCTTCCAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp TGGGCTCAGAAGATCTCCGTGCTCCCTGAGGAGCCAGGCTGGTGCCCAGAATCAGTGGGTCCCAGATGTTaGCCTGCAGCTCGTCATTCA +
Preference number: 4 (lower is better)
Translates to: WAQKISVLPEEPGWCPESVGPRC*PAARHS
Trigger: TGAATGACGAGCTGCAGGCCAACATCTGGGACCCAC...TGATTCTGGGCACCAGCCTGGCTCCTCAGGGAGCACGGAGATCTTCTGAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp GAGTGGTGTTGGGGTGTTGTCCTCAGGGACCTGAGATCATGCAGGCCATGCTGGTGGCTCAGGAGCTGCTaGATAACCAGGTGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: EWCWGVVLRDLRSCRPCWWLRSC*ITRWEC
Trigger: GCACTCCCACCTGGTTATCCAGCAGCTCCTGAGCCA...CCAGCATGGCCTGCATGATCTCAGGTCCCTGAGGACAACACCCCAACACCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR TCA 90 bp TGGGCTCAGAAGATCTCCGTGCTCCCTGAGGAGCCAGGCTGGTGCCCAGAATCACAGTTTTTCAGGCGCTaGGAGGGCATAGAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: WAQKISVLPEEPGWCPESQFFRR*EGIEGQ
Trigger: CTGACCTTCTATGCCCTCTCAGCGCCTGAAAAACTG...TGATTCTGGGCACCAGCCTGGCTCCTCAGGGAGCACGGAGATCTTCTGAGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111178.2
CDS-3UTR TCA 90 bp AACTGGAAGGCACCACGACCCAGGGACCCTCAAGAAGTCTGGGGCTTCTTTTCAGCCGCAGCAGGGTGTTaGACATCTCCAGTACCGTGG +
Preference number: 4 (lower is better)
Translates to: NWKAPRPRDPQEVWGFFSAAAGC*TSPVPW
Trigger: CCACGGTACTGGAGATGTTCAACACCCTGCTGCGGC...TGAAAAGAAGCCCCAGACTTCTTGAGGGTCCCTGGGTCGTGGTGCCTTCCAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR TCA 90 bp GCTCAGCTTTCTCTCATCCCAGAGGCTGTGGAAACAAAGACATCAGGGACCAAAGCGCGTAGTCGATGCTaGGCCGCAGCTGCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: AQLSLIPEAVETKTSGTKARSRC*AAAAAA
Trigger: TGCTGCGGCAGCTGCGGCTCAGCATCGACTACGCGC...TTTGGTCCCTGATGTCTTTGTTTCCACAGCCTCTGGGATGAGAGAAAGCTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR TCA 90 bp CAGGACACAGACTCACCACACTCGTGCTTTGCTGAAGCTGCCACCCAGTCTGGGCCAGCTCAATGCTTATaGGGGCCAGCAGGCCATAGA +
Preference number: 4 (lower is better)
Translates to: QDTDSPHSCFAEAATQSGPAQCL*GPAGHR
Trigger: TCTATGGCCTGCTGGCCCTCATAAGCATTGAGCTGG...CCCAGACTGGGTGGCAGCTTCAGCAAAGCACGAGTGTGGTGAGTCTGTGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR TCA 90 bp CAGGACACAGACTCACCACACTCGTGCTTTGCTGAAGCTGCCACCCAGTCTGGGCTCCCAGGACCTCACTaGTTTTGCTCTGGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: QDTDSPHSCFAEAATQSGLPGPH*FCSGGR
Trigger: TCTTCCGCCAGAGCAAAATCAGTGAGGTCCTGGGAG...CCCAGACTGGGTGGCAGCTTCAGCAAAGCACGAGTGTGGTGAGTCTGTGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR TCA 90 bp TCTTTTCCCTGCCTTGTGATGGAGGGACAGATCCTCCTGCACCCACCATCTAGAGGCCGTAGGCTGCGCTaGTGGTTCCTGAAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: SFPCLVMEGQILLHPPSRGRRLR*WFLKGL
Trigger: CAAGCCCTTCAGGAACCATCAGCGCAGCCTACGGCC...TCTAGATGGTGGGTGCAGGAGGATCTGTCCCTCCATCACAAGGCAGGGAAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR GCA 90 bp CCAGGGACCCTCAAGAAGTCTGGGGCTTCTTTTCAGGAAGTCAAGAGTCTTAAGGCACAGTCGCCGCGCTaGGGCTGTTGGCGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: PGTLKKSGASFQEVKSLKAQSPR*GCWRPG
Trigger: ACCTGGACGCCAACAGCCGCAGCGCGGCGACTGTGC...CTTAAGACTCTTGACTTCCTGAAAAGAAGCCCCAGACTTCTTGAGGGTCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR GCA 90 bp TCTTTTCCCTGCCTTGTGATGGAGGGACAGATCCTCCTGCACCCACCATCTAGAGGCGGTCCAGGAAGTTaGTGGGCAGGGCCGACATCA +
Preference number: 4 (lower is better)
Translates to: SFPCLVMEGQILLHPPSRGGPGS*WAGPTS
Trigger: TGATGTCGGCCCTGCCCAGCAACTTCCTGGACCGCC...TCTAGATGGTGGGTGCAGGAGGATCTGTCCCTCCATCACAAGGCAGGGAAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR GCA 90 bp AGCTGCTCCCAGCACACCAAGTCACATAGGGACAGGGAGGTAGCACATAGGGAATCTACCACCTGTCTCTaGCGCTCACGCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SCSQHTKSHRDREVAHRESTTCL*RSRSCS
Trigger: GGAGCAGGAGCGTGAGCGGCAGAGACAGGTGGTAGA...TTCCCTATGTGCTACCTCCCTGTCCCTATGTGACTTGGTGTGCTGGGAGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp TTCTTCTGTTCCCAGGGCAAGGTGAGAGACAGACATATCTGTGTGGGCCTGGAGCAGGCCATGAGCAGCTaGTCCAGCGCCTCCATGGCA +
Preference number: 4 (lower is better)
Translates to: FFCSQGKVRDRHICVGLEQAMSS*SSASMA
Trigger: TGCCATGGAGGCGCTGGACCAGCTGCTCATGGCCTG...CTCCAGGCCCACACAGATATGTCTGTCTCTCACCTTGCCCTGGGAACAGAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111178.2
CDS-3UTR TCA 90 bp CTGACTCTGAGGCATACTTGGTCACGATCAGATTCCATTTCCTGTCAACAGGCAGGCAGTGGCAGGCCATaGGCAGCTGGTCCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: LTLRHTWSRSDSISCQQAGSGRP*AAGPAP
Trigger: AGGCGCTGGACCAGCTGCTCATGGCCTGCCACTGCC...TGCCTGTTGACAGGAAATGGAATCTGATCGTGACCAAGTATGCCTCAGAGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111178.2
CDS-3UTR TCA 90 bp AACTGGAAGGCACCACGACCCAGGGACCCTCAAGAAGTCTGGGGCTTCTTTTCACCCCTTGCAGGCCTTTaGTGCCTGACATGCGGATCT +
Preference number: 4 (lower is better)
Translates to: NWKAPRPRDPQEVWGFFSPLAGL*CLTCGS
Trigger: AGATCCGCATGTCAGGCATCAAAGGCCTGCAAGGGG...TGAAAAGAAGCCCCAGACTTCTTGAGGGTCCCTGGGTCGTGGTGCCTTCCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR TCA 90 bp TGGGCTCAGAAGATCTCCGTGCTCCCTGAGGAGCCAGGCTGGTGCCCAGAATCAAAACCTGTGGATACCTaGAGGAGGGACTTCAGCAAC +
Preference number: 4 (lower is better)
Translates to: WAQKISVLPEEPGWCPESKPVDT*RRDFSN
Trigger: GTTGCTGAAGTCCCTCCTTCAGGTATCCACAGGTTT...TGATTCTGGGCACCAGCCTGGCTCCTCAGGGAGCACGGAGATCTTCTGAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR TCA 90 bp TGGGCTCAGAAGATCTCCGTGCTCCCTGAGGAGCCAGGCTGGTGCCCAGAATCAGATTCCACCTCTACCTaGAGGGAAATGGTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: WAQKISVLPEEPGWCPESDSTST*REMVSP
Trigger: TGGAGAGACCATTTCCCTTCAGGTAGAGGTGGAATC...TGATTCTGGGCACCAGCCTGGCTCCTCAGGGAGCACGGAGATCTTCTGAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR GCA 90 bp CCATGTGCCAGACTCCAGTCATTAAGAGTTCAGAAAGGGCAAGTGCTGGGCTCATGCCGCTCACGCTCCTaGTCCTCAACCGCCACACTG +
Preference number: 4 (lower is better)
Translates to: PCARLQSLRVQKGQVLGSCRSRS*SSTATL
Trigger: CAGTGTGGCGGTTGAGGAGCAGGAGCGTGAGCGGCA...TGAGCCCAGCACTTGCCCTTTCTGAACTCTTAATGACTGGAGTCTGGCACATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp TGGGCTCAGAAGATCTCCGTGCTCCCTGAGGAGCCAGGCTGGTGCCCAGAATCAGTCTCTATCACCTCGTaGATGTGCTGGCAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: WAQKISVLPEEPGWCPESVSITS*MCWQKA
Trigger: TGCTTTCTGCCAGCACATCCACGAGGTGATAGAGAC...TGATTCTGGGCACCAGCCTGGCTCCTCAGGGAGCACGGAGATCTTCTGAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111178.2
CDS-3UTR CCA 90 bp GAGTGGTGTTGGGGTGTTGTCCTCAGGGACCTGAGATCATGCAGGCCATGCTGGTCTCATAGACAGGGATaGAGTGGTTTTGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: EWCWGVVLRDLRSCRPCWSHRQG*SGFAAG
Trigger: GCCAGCCGCAAAACCACTCCATCCCTGTCTATGAGA...CCAGCATGGCCTGCATGATCTCAGGTCCCTGAGGACAACACCCCAACACCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR CAA 72 bp AAAGGGCCAAACCAAGATAACTGCAAGTGGCCTTGTTaGCACCCACCCAGTCCTGGGTCAGCTGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: KGPNQDNCKWPC*HPPSPGSAAPS
Trigger: GCTGGGAGCAGCTGACCCAGGACTGGGTGGGTGCAAACAAGGCCACTTGCAGTTATCTTGGTTTGGCCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR TCA 90 bp TTCTTCTGTTCCCAGGGCAAGGTGAGAGACAGACATATCTGTGTGGGCCTGGAGCCCCTTGCAGGCCTTTaGTGCCTGACATGCGGATCT +
Preference number: 4 (lower is better)
Translates to: FFCSQGKVRDRHICVGLEPLAGL*CLTCGS
Trigger: AGATCCGCATGTCAGGCATCAAAGGCCTGCAAGGGG...CTCCAGGCCCACACAGATATGTCTGTCTCTCACCTTGCCCTGGGAACAGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR TCA 90 bp TGGGGGTGGGGTAGGGACTGCTTGGCCTTAATAGGTTTGTTGGCTCCTTTGGATCCACGTGCTGCAGATTaGAAAGCAGCGACGGGACGA +
Preference number: 4 (lower is better)
Translates to: WGWGRDCLALIGLLAPLDPRAAD*KAATGR
Trigger: TCGTCCCGTCGCTGCTTTTCAATCTGCAGCACGTGG...ATCCAAAGGAGCCAACAAACCTATTAAGGCCAAGCAGTCCCTACCCCACCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR TCA 90 bp GAGGCTTCCCAGGCCCTTCTGCTTCTCAATGGAGATGTCCTTGTGATTCTCTGTGAAGAGGATCACCTCTaGGCGCTGGTAGGTCGGCAG +
Preference number: 4 (lower is better)
Translates to: EASQALLLLNGDVLVILCEEDHL*ALVGRQ
Trigger: CTGCCGACCTACCAGCGCTCAGAGGTGATCCTCTTC...ACAGAGAATCACAAGGACATCTCCATTGAGAAGCAGAAGGGCCTGGGAAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR TCA 90 bp GCTCAGCTTTCTCTCATCCCAGAGGCTGTGGAAACAAAGACATCAGGGACCAAACCAGCACCAGTCGGATaGGGTCCACCACCACCTCCT +
Preference number: 4 (lower is better)
Translates to: AQLSLIPEAVETKTSGTKPAPVG*GPPPPP
Trigger: AGGAGGTGGTGGTGGACCTCATCCGACTGGTGCTGG...TTTGGTCCCTGATGTCTTTGTTTCCACAGCCTCTGGGATGAGAGAAAGCTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR TCA 90 bp TGGGCTCAGAAGATCTCCGTGCTCCCTGAGGAGCCAGGCTGGTGCCCAGAATCAACACCATCTAGATTCTaGGACAACCTGGGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: WAQKISVLPEEPGWCPESTPSRF*DNLGFS
Trigger: GGAAAAGCCCAGGTTGTCTCAGAATCTAGATGGTGT...TGATTCTGGGCACCAGCCTGGCTCCTCAGGGAGCACGGAGATCTTCTGAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR GCA 90 bp TCTTTTCCCTGCCTTGTGATGGAGGGACAGATCCTCCTGCACCCACCATCTAGAAGGTGGCTCAGGAGCTaGTGGATAACCAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: SFPCLVMEGQILLHPPSRRWLRS*WITRWE
Trigger: CTCCCACCTGGTTATCCAGCAGCTCCTGAGCCACCT...TCTAGATGGTGGGTGCAGGAGGATCTGTCCCTCCATCACAAGGCAGGGAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR GCA 90 bp CCAGGGACCCTCAAGAAGTCTGGGGCTTCTTTTCAGGAAGTCAAGAGTCTTAAGATAGGACTTCCACGATaGCGGCGCGCACAGTCGCCG +
Preference number: 4 (lower is better)
Translates to: PGTLKKSGASFQEVKSLKIGLPR*RRAQSP
Trigger: CGGCGACTGTGCGCGCCGGCATCGTGGAAGTCCTAT...CTTAAGACTCTTGACTTCCTGAAAAGAAGCCCCAGACTTCTTGAGGGTCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR GCA 90 bp AGCTGCTCCCAGCACACCAAGTCACATAGGGACAGGGAGGTAGCACATAGGGAAGAAGAGGCGGATTTCTaGGTCCTCCATGAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: SCSQHTKSHRDREVAHREEEADF*VLHEGS
Trigger: ACTGCCCTCATGGAGGACGCAGAAATCCGCCTCTTC...TTCCCTATGTGCTACCTCCCTGTCCCTATGTGACTTGGTGTGCTGGGAGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR GCA 90 bp ACCCCAAGCTTCCTCTGGACAGAGATGTGGGAAGATGCTACGCAGCCAGGACACATGAAGACAGTGTCCTaGCGGGAGCACTTGTCCACT +
Preference number: 4 (lower is better)
Translates to: TPSFLWTEMWEDATQPGHMKTVS*REHLST
Trigger: AGTGGACAAGTGCTCCCGGCAGGACACTGTCTTCAT...GTGTCCTGGCTGCGTAGCATCTTCCCACATCTCTGTCCAGAGGAAGCTTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp AACTGGAAGGCACCACGACCCAGGGACCCTCAAGAAGTCTGGGGCTTCTTTTCACTTGTCCATGTGCTGTaGGTCCCAGATGTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: NWKAPRPRDPQEVWGFFSLVHVL*VPDVGL
Trigger: CAGGCCAACATCTGGGACCCACAGCACATGGACAAG...TGAAAAGAAGCCCCAGACTTCTTGAGGGTCCCTGGGTCGTGGTGCCTTCCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp GCTCAGCTTTCTCTCATCCCAGAGGCTGTGGAAACAAAGACATCAGGGACCAAATCCTTCTCTGGTGCTTaGAGGGGCGAGGGAGACCGG +
Preference number: 4 (lower is better)
Translates to: AQLSLIPEAVETKTSGTKSFSGA*RGEGDR
Trigger: CCGGTCTCCCTCGCCCCTCCAAGCACCAGAGAAGGA...TTTGGTCCCTGATGTCTTTGTTTCCACAGCCTCTGGGATGAGAGAAAGCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp TGGGGGTGGGGTAGGGACTGCTTGGCCTTAATAGGTTTGTTGGCTCCTTTGGATGGTCCAGGAAGTTGCTaGGCAGGGCCGACATCATGT +
Preference number: 4 (lower is better)
Translates to: WGWGRDCLALIGLLAPLDGPGSC*AGPTSC
Trigger: ACATGATGTCGGCCCTGCCCAGCAACTTCCTGGACC...ATCCAAAGGAGCCAACAAACCTATTAAGGCCAAGCAGTCCCTACCCCACCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp TGGGCTCAGAAGATCTCCGTGCTCCCTGAGGAGCCAGGCTGGTGCCCAGAATCATTTCTGGGCTGTTCCTaGATTCCACCTCTACCTGAA +
Preference number: 4 (lower is better)
Translates to: WAQKISVLPEEPGWCPESFLGCS*IPPLPE
Trigger: TTCAGGTAGAGGTGGAATCCAGGAACAGCCCAGAAA...TGATTCTGGGCACCAGCCTGGCTCCTCAGGGAGCACGGAGATCTTCTGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR TCA 90 bp AGCTGCTCCCAGCACACCAAGTCACATAGGGACAGGGAGGTAGCACATAGGGAATTTCCACGAAGAGGTTaGTACTCTGGCAGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SCSQHTKSHRDREVAHREFPRRG*YSGSGR
Trigger: CCTGCCACTGCCAGAGTATCAACCTCTTCGTGGAAA...TTCCCTATGTGCTACCTCCCTGTCCCTATGTGACTTGGTGTGCTGGGAGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111178.2
CDS-3UTR TCA 90 bp TGGGCTCAGAAGATCTCCGTGCTCCCTGAGGAGCCAGGCTGGTGCCCAGAATCAAGTGGCACATTTCACTaGATCGGGACACAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: WAQKISVLPEEPGWCPESSGTFH*IGTQRS
Trigger: ACTTCTTTGTGTCCCGATTCAGTGAAATGTGCCACT...TGATTCTGGGCACCAGCCTGGCTCCTCAGGGAGCACGGAGATCTTCTGAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR TCA 90 bp CTGACTCTGAGGCATACTTGGTCACGATCAGATTCCATTTCCTGTCAACAGGCACCAGCACCAGTCGGATaGGGTCCACCACCACCTCCT +
Preference number: 4 (lower is better)
Translates to: LTLRHTWSRSDSISCQQAPAPVG*GPPPPP
Trigger: AGGAGGTGGTGGTGGACCTCATCCGACTGGTGCTGG...TGCCTGTTGACAGGAAATGGAATCTGATCGTGACCAAGTATGCCTCAGAGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR TCA 90 bp TGGGGGTGGGGTAGGGACTGCTTGGCCTTAATAGGTTTGTTGGCTCCTTTGGATCTCCCAGGACCTCACTaGTTTTGCTCTGGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: WGWGRDCLALIGLLAPLDLPGPH*FCSGGR
Trigger: TCTTCCGCCAGAGCAAAATCAGTGAGGTCCTGGGAG...ATCCAAAGGAGCCAACAAACCTATTAAGGCCAAGCAGTCCCTACCCCACCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR TCA 90 bp CCAGGGACCCTCAAGAAGTCTGGGGCTTCTTTTCAGGAAGTCAAGAGTCTTAAGCAGGCAGAGCCTGTCTaGATTGTAGCCGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: PGTLKKSGASFQEVKSLKQAEPV*IVAAAS
Trigger: GGAGGCAGCGGCTACAATTCAGACAGGCTCTGCCTG...CTTAAGACTCTTGACTTCCTGAAAAGAAGCCCCAGACTTCTTGAGGGTCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR TCA 90 bp GAGTGGTGTTGGGGTGTTGTCCTCAGGGACCTGAGATCATGCAGGCCATGCTGGTCAGTGTCTCATAGGTaGTCTCTTCTGCAGGAACTC +
Preference number: 4 (lower is better)
Translates to: EWCWGVVLRDLRSCRPCWSVSHR*SLLQEL
Trigger: GAGTTCCTGCAGAAGAGATCACCTATGAGACACTGA...CCAGCATGGCCTGCATGATCTCAGGTCCCTGAGGACAACACCCCAACACCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR GCA 90 bp TGGGGGTGGGGTAGGGACTGCTTGGCCTTAATAGGTTTGTTGGCTCCTTTGGATTTGGTGCCAAGGATCTaGAGGTTCGGCTTCTCCGAC +
Preference number: 4 (lower is better)
Translates to: WGWGRDCLALIGLLAPLDLVPRI*RFGFSD
Trigger: GTCGGAGAAGCCGAACCTGCAGATCCTTGGCACCAA...ATCCAAAGGAGCCAACAAACCTATTAAGGCCAAGCAGTCCCTACCCCACCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111178.2
CDS-3UTR GCA 90 bp TGGGGGTGGGGTAGGGACTGCTTGGCCTTAATAGGTTTGTTGGCTCCTTTGGATGAAGAGGCGGATTTCTaGGTCCTCCATGAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: WGWGRDCLALIGLLAPLDEEADF*VLHEGS
Trigger: ACTGCCCTCATGGAGGACGCAGAAATCCGCCTCTTC...ATCCAAAGGAGCCAACAAACCTATTAAGGCCAAGCAGTCCCTACCCCACCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR GCA 90 bp GCTCAGCTTTCTCTCATCCCAGAGGCTGTGGAAACAAAGACATCAGGGACCAAAGAGGTTCAGGTAGGCTaGGCCCAGAGCATAGAGCGC +
Preference number: 4 (lower is better)
Translates to: AQLSLIPEAVETKTSGTKEVQVG*AQSIER
Trigger: GCGCTCTATGCTCTGGGCGCAGCCTACCTGAACCTC...TTTGGTCCCTGATGTCTTTGTTTCCACAGCCTCTGGGATGAGAGAAAGCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111178.2
CDS-3UTR CCA 90 bp CAGGACACAGACTCACCACACTCGTGCTTTGCTGAAGCTGCCACCCAGTCTGGGTCATCGTGGCTTGAGTaGCACATTTCACTGAATCGG +
Preference number: 4 (lower is better)
Translates to: QDTDSPHSCFAEAATQSGSSWLE*HISLNR
Trigger: CCGATTCAGTGAAATGTGCCACTCAAGCCACGATGA...CCCAGACTGGGTGGCAGCTTCAGCAAAGCACGAGTGTGGTGAGTCTGTGTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp CAGACTCCAGTCATTAAGAGTTCAGAAAGGGCAAGTGCTGGGCTCAGAAGATCTTCCTTCTCTGGTGCTTaGAGGGGCGAGGGAGACCGG +
Preference number: 4 (lower is better)
Translates to: QTPVIKSSERASAGLRRSSFSGA*RGEGDR
Trigger: CCGGTCTCCCTCGCCCCTCCAAGCACCAGAGAAGGA...AGATCTTCTGAGCCCAGCACTTGCCCTTTCTGAACTCTTAATGACTGGAGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp CCCAGAATCACGATCAGGGCCTCCCATGATTTCCCTCTGCAGTCTTTAGACAAGTGGCTCAGGAGCTGCTaGATAACCAGGTGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: PRITIRASHDFPLQSLDKWLRSC*ITRWEC
Trigger: GCACTCCCACCTGGTTATCCAGCAGCTCCTGAGCCA...CTTGTCTAAAGACTGCAGAGGGAAATCATGGGAGGCCCTGATCGTGATTCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp CCCAGAATCACGATCAGGGCCTCCCATGATTTCCCTCTGCAGTCTTTAGACAAGCTGTTGGCGTCCAGGTaGCTCAGGAGCTGCTGGATA +
Preference number: 4 (lower is better)
Translates to: PRITIRASHDFPLQSLDKLLASR*LRSCWI
Trigger: TATCCAGCAGCTCCTGAGCCACCTGGACGCCAACAG...CTTGTCTAAAGACTGCAGAGGGAAATCATGGGAGGCCCTGATCGTGATTCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp AGCTGCTCCCAGCACACCAAGTCACATAGGGACAGGGAGGTAGCACATAGGGAATTGATGACGGCCTCCTaGAACATGCACTCCTCATGC +
Preference number: 4 (lower is better)
Translates to: SCSQHTKSHRDREVAHRELMTAS*NMHSSC
Trigger: GCATGAGGAGTGCATGTTCCAGGAGGCCGTCATCAA...TTCCCTATGTGCTACCTCCCTGTCCCTATGTGACTTGGTGTGCTGGGAGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp GAGTGGTGTTGGGGTGTTGTCCTCAGGGACCTGAGATCATGCAGGCCATGCTGGTTCAGCAACATGATCTaGGTCAGCCGGTTCCTATTC +
Preference number: 4 (lower is better)
Translates to: EWCWGVVLRDLRSCRPCWFSNMI*VSRFLF
Trigger: GAATAGGAACCGGCTGACCCAGATCATGTTGCTGAA...CCAGCATGGCCTGCATGATCTCAGGTCCCTGAGGACAACACCCCAACACCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp CCCAGAATCACGATCAGGGCCTCCCATGATTTCCCTCTGCAGTCTTTAGACAAGGGTCCAGGAAGTTGCTaGGCAGGGCCGACATCATGT +
Preference number: 4 (lower is better)
Translates to: PRITIRASHDFPLQSLDKGPGSC*AGPTSC
Trigger: ACATGATGTCGGCCCTGCCCAGCAACTTCCTGGACC...CTTGTCTAAAGACTGCAGAGGGAAATCATGGGAGGCCCTGATCGTGATTCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp CAAAGGGCGCTTTCTGGAACTTCTCTACCACCTGTCTCTGCCGCTCACGCTCCTGTCTCTATCACCTCGTaGATGTGCTGGCAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: QRALSGTSLPPVSAAHAPVSITS*MCWQKA
Trigger: TGCTTTCTGCCAGCACATCCACGAGGTGATAGAGAC...AGGAGCGTGAGCGGCAGAGACAGGTGGTAGAGAAGTTCCAGAAAGCGCCCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219331.2
CDS-3UTR TCA 90 bp AGCTGCTCCCAGCACACCAAGTCACATAGGGACAGGGAGGTAGCACATAGGGAACAGGTCATCGTGGCTTaGGTGGCACATTTCACTGAA +
Preference number: 4 (lower is better)
Translates to: SCSQHTKSHRDREVAHREQVIVA*VAHFTE
Trigger: TTCAGTGAAATGTGCCACTCAAGCCACGATGACCTG...TTCCCTATGTGCTACCTCCCTGTCCCTATGTGACTTGGTGTGCTGGGAGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR TCA 90 bp GCTCAGCTTTCTCTCATCCCAGAGGCTGTGGAAACAAAGACATCAGGGACCAAACCACGTGCTGCAGATTaGAAAGCAGCGACGGGACGA +
Preference number: 4 (lower is better)
Translates to: AQLSLIPEAVETKTSGTKPRAAD*KAATGR
Trigger: TCGTCCCGTCGCTGCTTTTCAATCTGCAGCACGTGG...TTTGGTCCCTGATGTCTTTGTTTCCACAGCCTCTGGGATGAGAGAAAGCTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR TCA 90 bp CAGACTCCAGTCATTAAGAGTTCAGAAAGGGCAAGTGCTGGGCTCAGAAGATCTGAAGAGGATCACCTCTaGGCGCTGGTAGGTCGGCAG +
Preference number: 4 (lower is better)
Translates to: QTPVIKSSERASAGLRRSEEDHL*ALVGRQ
Trigger: CTGCCGACCTACCAGCGCTCAGAGGTGATCCTCTTC...AGATCTTCTGAGCCCAGCACTTGCCCTTTCTGAACTCTTAATGACTGGAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR TCA 90 bp AGCTGCTCCCAGCACACCAAGTCACATAGGGACAGGGAGGTAGCACATAGGGAAAAACCTGTGGATACCTaGAGGAGGGACTTCAGCAAC +
Preference number: 4 (lower is better)
Translates to: SCSQHTKSHRDREVAHREKPVDT*RRDFSN
Trigger: GTTGCTGAAGTCCCTCCTTCAGGTATCCACAGGTTT...TTCCCTATGTGCTACCTCCCTGTCCCTATGTGACTTGGTGTGCTGGGAGCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR GCA 90 bp GAGGCTTCCCAGGCCCTTCTGCTTCTCAATGGAGATGTCCTTGTGATTCTCTGTCTTTTCCTTCTCTGGTaGTTGGAGGGGCGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: EASQALLLLNGDVLVILCLFLLW*LEGRGR
Trigger: TCTCCCTCGCCCCTCCAAGCACCAGAGAAGGAAAAG...ACAGAGAATCACAAGGACATCTCCATTGAGAAGCAGAAGGGCCTGGGAAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR GCA 90 bp CCAGGGACCCTCAAGAAGTCTGGGGCTTCTTTTCAGGAAGTCAAGAGTCTTAAGAGGTGGCTCAGGAGCTaGTGGATAACCAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: PGTLKKSGASFQEVKSLKRWLRS*WITRWE
Trigger: CTCCCACCTGGTTATCCAGCAGCTCCTGAGCCACCT...CTTAAGACTCTTGACTTCCTGAAAAGAAGCCCCAGACTTCTTGAGGGTCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR GCA 90 bp CAGACTCCAGTCATTAAGAGTTCAGAAAGGGCAAGTGCTGGGCTCAGAAGATCTTCTACCACCTGTCTCTaGCGCTCACGCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: QTPVIKSSERASAGLRRSSTTCL*RSRSCS
Trigger: GGAGCAGGAGCGTGAGCGGCAGAGACAGGTGGTAGA...AGATCTTCTGAGCCCAGCACTTGCCCTTTCTGAACTCTTAATGACTGGAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp TTCTTCTGTTCCCAGGGCAAGGTGAGAGACAGACATATCTGTGTGGGCCTGGAGACGTACCCATATCGATaGCGACCCACATCTCGGATG +
Preference number: 4 (lower is better)
Translates to: FFCSQGKVRDRHICVGLETYPYR*RPTSRM
Trigger: CATCCGAGATGTGGGTCGCCATCGATATGGGTACGT...CTCCAGGCCCACACAGATATGTCTGTCTCTCACCTTGCCCTGGGAACAGAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111178.2
CDS-3UTR CCA 90 bp CCCAGAATCACGATCAGGGCCTCCCATGATTTCCCTCTGCAGTCTTTAGACAAGGTGGGTCCCAGATGTTaGCCTGCAGCTCGTCATTCA +
Preference number: 4 (lower is better)
Translates to: PRITIRASHDFPLQSLDKVGPRC*PAARHS
Trigger: TGAATGACGAGCTGCAGGCCAACATCTGGGACCCAC...CTTGTCTAAAGACTGCAGAGGGAAATCATGGGAGGCCCTGATCGTGATTCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp GAGTGGTGTTGGGGTGTTGTCCTCAGGGACCTGAGATCATGCAGGCCATGCTGGGATTCTGAGACAACCTaGGCTTTTCCACAAACACGT +
Preference number: 4 (lower is better)
Translates to: EWCWGVVLRDLRSCRPCWDSETT*AFPQTR
Trigger: ACGTGTTTGTGGAAAAGCCCAGGTTGTCTCAGAATC...CCAGCATGGCCTGCATGATCTCAGGTCCCTGAGGACAACACCCCAACACCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR CAA 72 bp GAGGAAGGAGGACCACAGAGGACCAGAGAGGACCTTTaGCTCACTGTCCAAGGTGACAAGTTCTTAGCCATC +
Preference number: 4 (lower is better)
Translates to: EEGGPQRTREDL*LTVQGDKFLAI
Trigger: GATGGCTAAGAACTTGTCACCTTGGACAGTGAGCAAAAGGTCCTCTCTGGTCCTCTGTGGTCCTCCTTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR TCA 90 bp ACCCCAAGCTTCCTCTGGACAGAGATGTGGGAAGATGCTACGCAGCCAGGACACAGTGGCACATTTCACTaGATCGGGACACAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: TPSFLWTEMWEDATQPGHSGTFH*IGTQRS
Trigger: ACTTCTTTGTGTCCCGATTCAGTGAAATGTGCCACT...GTGTCCTGGCTGCGTAGCATCTTCCCACATCTCTGTCCAGAGGAAGCTTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR TCA 90 bp TGGGCTCAGAAGATCTCCGTGCTCCCTGAGGAGCCAGGCTGGTGCCCAGAATCAGTGCTGCGGCTGAATTaGGTACATGATGATTTTAAA +
Preference number: 4 (lower is better)
Translates to: WAQKISVLPEEPGWCPESVLRLN*VHDDFK
Trigger: TTTAAAATCATCATGTACTCAATTCAGCCGCAGCAC...TGATTCTGGGCACCAGCCTGGCTCCTCAGGGAGCACGGAGATCTTCTGAGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR TCA 90 bp AGCTGCTCCCAGCACACCAAGTCACATAGGGACAGGGAGGTAGCACATAGGGAATGGGAGTGCTGCGGCTaGATTGAGTACATGATGATT +
Preference number: 4 (lower is better)
Translates to: SCSQHTKSHRDREVAHREWECCG*IEYMMI
Trigger: AATCATCATGTACTCAATTCAGCCGCAGCACTCCCA...TTCCCTATGTGCTACCTCCCTGTCCCTATGTGACTTGGTGTGCTGGGAGCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR TCA 90 bp CCAGGGACCCTCAAGAAGTCTGGGGCTTCTTTTCAGGAAGTCAAGAGTCTTAAGCCAGCTCAATGCTTATaGGGGCCAGCAGGCCATAGA +
Preference number: 4 (lower is better)
Translates to: PGTLKKSGASFQEVKSLKPAQCL*GPAGHR
Trigger: TCTATGGCCTGCTGGCCCTCATAAGCATTGAGCTGG...CTTAAGACTCTTGACTTCCTGAAAAGAAGCCCCAGACTTCTTGAGGGTCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR GCA 90 bp TCTTTTCCCTGCCTTGTGATGGAGGGACAGATCCTCCTGCACCCACCATCTAGATCTGCCTCTTCCACGTaGTGCAGATTGAAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: SFPCLVMEGQILLHPPSRSASST*CRLKSS
Trigger: GCTGCTTTTCAATCTGCAGCACGTGGAAGAGGCAGA...TCTAGATGGTGGGTGCAGGAGGATCTGTCCCTCCATCACAAGGCAGGGAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR GCA 90 bp ACCCCAAGCTTCCTCTGGACAGAGATGTGGGAAGATGCTACGCAGCCAGGACACAGGAAGCATGTATGGTaGCTCTTTCTTTCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: TPSFLWTEMWEDATQPGHRKHVW*LFLSGL
Trigger: GAGACCAGAAAGAAAGAGGCACCATACATGCTTCCT...GTGTCCTGGCTGCGTAGCATCTTCCCACATCTCTGTCCAGAGGAAGCTTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp GCTCAGCTTTCTCTCATCCCAGAGGCTGTGGAAACAAAGACATCAGGGACCAAATTGATACTCTGGCAGTaGCAGGCCATGAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: AQLSLIPEAVETKTSGTKLILWQ*QAMSSW
Trigger: CCAGCTGCTCATGGCCTGCCACTGCCAGAGTATCAA...TTTGGTCCCTGATGTCTTTGTTTCCACAGCCTCTGGGATGAGAGAAAGCTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111178.2
CDS-3UTR CCA 90 bp CAGACTCCAGTCATTAAGAGTTCAGAAAGGGCAAGTGCTGGGCTCAGAAGATCTCTCCTTTTCCTTCTCTaGTGCTTGGAGGGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: QTPVIKSSERASAGLRRSLLFLL*CLEGRG
Trigger: CCCTCGCCCCTCCAAGCACCAGAGAAGGAAAAGGAG...AGATCTTCTGAGCCCAGCACTTGCCCTTTCTGAACTCTTAATGACTGGAGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp CTGACTCTGAGGCATACTTGGTCACGATCAGATTCCATTTCCTGTCAACAGGCACTCCTTTTCCTTCTCTaGTGCTTGGAGGGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: LTLRHTWSRSDSISCQQALLFLL*CLEGRG
Trigger: CCCTCGCCCCTCCAAGCACCAGAGAAGGAAAAGGAG...TGCCTGTTGACAGGAAATGGAATCTGATCGTGACCAAGTATGCCTCAGAGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp CTGACTCTGAGGCATACTTGGTCACGATCAGATTCCATTTCCTGTCAACAGGCACTGTTGGCGTCCAGGTaGCTCAGGAGCTGCTGGATA +
Preference number: 4 (lower is better)
Translates to: LTLRHTWSRSDSISCQQALLASR*LRSCWI
Trigger: TATCCAGCAGCTCCTGAGCCACCTGGACGCCAACAG...TGCCTGTTGACAGGAAATGGAATCTGATCGTGACCAAGTATGCCTCAGAGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp CCCAGAATCACGATCAGGGCCTCCCATGATTTCCCTCTGCAGTCTTTAGACAAGTTGATGACGGCCTCCTaGAACATGCACTCCTCATGC +
Preference number: 4 (lower is better)
Translates to: PRITIRASHDFPLQSLDKLMTAS*NMHSSC
Trigger: GCATGAGGAGTGCATGTTCCAGGAGGCCGTCATCAA...CTTGTCTAAAGACTGCAGAGGGAAATCATGGGAGGCCCTGATCGTGATTCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp TGGGGGTGGGGTAGGGACTGCTTGGCCTTAATAGGTTTGTTGGCTCCTTTGGATTGCACTGGAAACCTGTaGATACCTGAAGGAGGGACT +
Preference number: 4 (lower is better)
Translates to: WGWGRDCLALIGLLAPLDCTGNL*IPEGGT
Trigger: AGTCCCTCCTTCAGGTATCCACAGGTTTCCAGTGCA...ATCCAAAGGAGCCAACAAACCTATTAAGGCCAAGCAGTCCCTACCCCACCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp AACTGGAAGGCACCACGACCCAGGGACCCTCAAGAAGTCTGGGGCTTCTTTTCAATGGTAGAGAATTTGTaGCGGTTGCCATGGCGATCA +
Preference number: 4 (lower is better)
Translates to: NWKAPRPRDPQEVWGFFSMVENL*RLPWRS
Trigger: TGATCGCCATGGCAACCGCCACAAATTCTCTACCAT...TGAAAAGAAGCCCCAGACTTCTTGAGGGTCCCTGGGTCGTGGTGCCTTCCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp CCATGTGCCAGACTCCAGTCATTAAGAGTTCAGAAAGGGCAAGTGCTGGGCTCAACCTCGTGGATGTGCTaGCAGAAAGCAGGCACTGTT +
Preference number: 4 (lower is better)
Translates to: PCARLQSLRVQKGQVLGSTSWMC*QKAGTV
Trigger: AACAGTGCCTGCTTTCTGCCAGCACATCCACGAGGT...TGAGCCCAGCACTTGCCCTTTCTGAACTCTTAATGACTGGAGTCTGGCACATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111178.2
CDS-3UTR CCA 90 bp GATCTTCATCTGTCAGCTGAGGGATGTACGGCAGGCAGAGCCTGTCTGAATTGTACCTCGTGGATGTGCTaGCAGAAAGCAGGCACTGTT +
Preference number: 4 (lower is better)
Translates to: DLHLSAEGCTAGRACLNCTSWMC*QKAGTV
Trigger: AACAGTGCCTGCTTTCTGCCAGCACATCCACGAGGT...ACAATTCAGACAGGCTCTGCCTGCCGTACATCCCTCAGCTGACAGATGAAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219331.2
CDS-3UTR CCA 90 bp TGGGGGTGGGGTAGGGACTGCTTGGCCTTAATAGGTTTGTTGGCTCCTTTGGATTCGCTCCTCTTTTTCTaGGCTGTTCCTGGATTCCAC +
Preference number: 4 (lower is better)
Translates to: WGWGRDCLALIGLLAPLDSLLFF*AVPGFH
Trigger: GTGGAATCCAGGAACAGCCCAGAAAAAGAGGAGCGA...ATCCAAAGGAGCCAACAAACCTATTAAGGCCAAGCAGTCCCTACCCCACCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp AACTGGAAGGCACCACGACCCAGGGACCCTCAAGAAGTCTGGGGCTTCTTTTCACCACACTGTCCACAATaGCCTTCTTCAGTGTCTCAT +
Preference number: 4 (lower is better)
Translates to: NWKAPRPRDPQEVWGFFSPHCPQ*PSSVSH
Trigger: ATGAGACACTGAAGAAGGCCATTGTGGACAGTGTGG...TGAAAAGAAGCCCCAGACTTCTTGAGGGTCCCTGGGTCGTGGTGCCTTCCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp TGGGCTCAGAAGATCTCCGTGCTCCCTGAGGAGCCAGGCTGGTGCCCAGAATCAGTGATTTCAAAGATCTaGTTGAGTTTACTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: WAQKISVLPEEPGWCPESVISKI*LSLLCS
Trigger: GCTGCAGAGTAAACTCAACCAGATCTTTGAAATCAC...TGATTCTGGGCACCAGCCTGGCTCCTCAGGGAGCACGGAGATCTTCTGAGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp CCCAGAATCACGATCAGGGCCTCCCATGATTTCCCTCTGCAGTCTTTAGACAAGTCTCATAGACAGGGATaGAGTGGTTTTGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: PRITIRASHDFPLQSLDKSHRQG*SGFAAG
Trigger: GCCAGCCGCAAAACCACTCCATCCCTGTCTATGAGA...CTTGTCTAAAGACTGCAGAGGGAAATCATGGGAGGCCCTGATCGTGATTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR TCA 90 bp CAGACTCCAGTCATTAAGAGTTCAGAAAGGGCAAGTGCTGGGCTCAGAAGATCTTCGGATGAGCCTCTCTaGGAGGTAGGCACCAATTCG +
Preference number: 4 (lower is better)
Translates to: QTPVIKSSERASAGLRRSSDEPL*EVGTNS
Trigger: CGAATTGGTGCCTACCTCTCAGAGAGGCTCATCCGA...AGATCTTCTGAGCCCAGCACTTGCCCTTTCTGAACTCTTAATGACTGGAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111178.2
CDS-3UTR TCA 90 bp CCCAGAATCACGATCAGGGCCTCCCATGATTTCCCTCTGCAGTCTTTAGACAAGGCTTGGCCACCATTTTaGGGAAGCTTTCCACGAAGA +
Preference number: 4 (lower is better)
Translates to: PRITIRASHDFPLQSLDKAWPPF*GSFPRR
Trigger: TCTTCGTGGAAAGCTTCCTCAAAATGGTGGCCAAGC...CTTGTCTAAAGACTGCAGAGGGAAATCATGGGAGGCCCTGATCGTGATTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111178.2
CDS-3UTR TCA 90 bp GAGTGGTGTTGGGGTGTTGTCCTCAGGGACCTGAGATCATGCAGGCCATGCTGGGTGCTGCGGCTGAATTaGGTACATGATGATTTTAAA +
Preference number: 4 (lower is better)
Translates to: EWCWGVVLRDLRSCRPCWVLRLN*VHDDFK
Trigger: TTTAAAATCATCATGTACTCAATTCAGCCGCAGCAC...CCAGCATGGCCTGCATGATCTCAGGTCCCTGAGGACAACACCCCAACACCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR GCA 90 bp GAGGCTTCCCAGGCCCTTCTGCTTCTCAATGGAGATGTCCTTGTGATTCTCTGTTCTGCCTCTTCCACGTaGTGCAGATTGAAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: EASQALLLLNGDVLVILCSASST*CRLKSS
Trigger: GCTGCTTTTCAATCTGCAGCACGTGGAAGAGGCAGA...ACAGAGAATCACAAGGACATCTCCATTGAGAAGCAGAAGGGCCTGGGAAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR GCA 90 bp CAGACTCCAGTCATTAAGAGTTCAGAAAGGGCAAGTGCTGGGCTCAGAAGATCTCTTTTCCTTCTCTGGTaGTTGGAGGGGCGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: QTPVIKSSERASAGLRRSLFLLW*LEGRGR
Trigger: TCTCCCTCGCCCCTCCAAGCACCAGAGAAGGAAAAG...AGATCTTCTGAGCCCAGCACTTGCCCTTTCTGAACTCTTAATGACTGGAGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR GCA 90 bp GCTCAGCTTTCTCTCATCCCAGAGGCTGTGGAAACAAAGACATCAGGGACCAAAATGAAGACAGTGTCCTaGCGGGAGCACTTGTCCACT +
Preference number: 4 (lower is better)
Translates to: AQLSLIPEAVETKTSGTKMKTVS*REHLST
Trigger: AGTGGACAAGTGCTCCCGGCAGGACACTGTCTTCAT...TTTGGTCCCTGATGTCTTTGTTTCCACAGCCTCTGGGATGAGAGAAAGCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR GCA 90 bp CTCTACCTGAAGGGAAATGGTCTCTCCAATGCTCTTCCTCTTGGACAAGCGATCATCACCTCGTGGATGTaGTGGCAGAAAGCAGGCACT +
Preference number: 4 (lower is better)
Translates to: LYLKGNGLSNALPLGQAIITSWM*WQKAGT
Trigger: AGTGCCTGCTTTCTGCCAGCACATCCACGAGGTGAT...GATCGCTTGTCCAAGAGGAAGAGCATTGGAGAGACCATTTCCCTTCAGGTAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219331.2
CDS-3UTR GCA 90 bp AGCTGCTCCCAGCACACCAAGTCACATAGGGACAGGGAGGTAGCACATAGGGAAAGGAAGCATGTATGGTaGCTCTTTCTTTCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: SCSQHTKSHRDREVAHRERKHVW*LFLSGL
Trigger: GAGACCAGAAAGAAAGAGGCACCATACATGCTTCCT...TTCCCTATGTGCTACCTCCCTGTCCCTATGTGACTTGGTGTGCTGGGAGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR GCA 90 bp AACTGGAAGGCACCACGACCCAGGGACCCTCAAGAAGTCTGGGGCTTCTTTTCAAAATGGTCTCTCCAATaGTCTTCCTCTTGGACAAGC +
Preference number: 4 (lower is better)
Translates to: NWKAPRPRDPQEVWGFFSKWSLQ*SSSWTS
Trigger: GCTTGTCCAAGAGGAAGAGCATTGGAGAGACCATTT...TGAAAAGAAGCCCCAGACTTCTTGAGGGTCCCTGGGTCGTGGTGCCTTCCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp AACTGGAAGGCACCACGACCCAGGGACCCTCAAGAAGTCTGGGGCTTCTTTTCATCAGTTTCTCCATGTTaGTCTTCACCAGACCATCCT +
Preference number: 4 (lower is better)
Translates to: NWKAPRPRDPQEVWGFFSSVSPC*SSPDHP
Trigger: AGGATGGTCTGGTGAAGACCAACATGGAGAAACTGA...TGAAAAGAAGCCCCAGACTTCTTGAGGGTCCCTGGGTCGTGGTGCCTTCCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111178.2
CDS-3UTR CCA 90 bp CCAGGGACCCTCAAGAAGTCTGGGGCTTCTTTTCAGGAAGTCAAGAGTCTTAAGAAGAGGTTGATACTCTaGCAGTGGCAGGCCATGAGC +
Preference number: 4 (lower is better)
Translates to: PGTLKKSGASFQEVKSLKKRLIL*QWQAMS
Trigger: GCTCATGGCCTGCCACTGCCAGAGTATCAACCTCTT...CTTAAGACTCTTGACTTCCTGAAAAGAAGCCCCAGACTTCTTGAGGGTCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111178.2
CDS-3UTR CCA 90 bp AACTGGAAGGCACCACGACCCAGGGACCCTCAAGAAGTCTGGGGCTTCTTTTCAATTTCCAGGTCATCGTaGCTTGAGTGGCACATTTCA +
Preference number: 4 (lower is better)
Translates to: NWKAPRPRDPQEVWGFFSISRSS*LEWHIS
Trigger: TGAAATGTGCCACTCAAGCCACGATGACCTGGAAAT...TGAAAAGAAGCCCCAGACTTCTTGAGGGTCCCTGGGTCGTGGTGCCTTCCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp CTGACTCTGAGGCATACTTGGTCACGATCAGATTCCATTTCCTGTCAACAGGCACTTGTCCATGTGCTGTaGGTCCCAGATGTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: LTLRHTWSRSDSISCQQALVHVL*VPDVGL
Trigger: CAGGCCAACATCTGGGACCCACAGCACATGGACAAG...TGCCTGTTGACAGGAAATGGAATCTGATCGTGACCAAGTATGCCTCAGAGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp AGCTGCTCCCAGCACACCAAGTCACATAGGGACAGGGAGGTAGCACATAGGGAAGGTTCCCAAAGAGAGTaGTTATCCAGGTGGATAAGA +
Preference number: 4 (lower is better)
Translates to: SCSQHTKSHRDREVAHREGSQRE*LSRWIR
Trigger: TCTTATCCACCTGGATAACCACTCTCTTTGGGAACC...TTCCCTATGTGCTACCTCCCTGTCCCTATGTGACTTGGTGTGCTGGGAGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp GAGGCTTCCCAGGCCCTTCTGCTTCTCAATGGAGATGTCCTTGTGATTCTCTGTTGCACTGGAAACCTGTaGATACCTGAAGGAGGGACT +
Preference number: 4 (lower is better)
Translates to: EASQALLLLNGDVLVILCCTGNL*IPEGGT
Trigger: AGTCCCTCCTTCAGGTATCCACAGGTTTCCAGTGCA...ACAGAGAATCACAAGGACATCTCCATTGAGAAGCAGAAGGGCCTGGGAAGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp TCTTTTCCCTGCCTTGTGATGGAGGGACAGATCCTCCTGCACCCACCATCTAGATTGTGGCGGTTGCCATaGCGATCAATGAAACTGATG +
Preference number: 4 (lower is better)
Translates to: SFPCLVMEGQILLHPPSRLWRLP*RSMKLM
Trigger: CATCAGTTTCATTGATCGCCATGGCAACCGCCACAA...TCTAGATGGTGGGTGCAGGAGGATCTGTCCCTCCATCACAAGGCAGGGAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp TCTTTTCCCTGCCTTGTGATGGAGGGACAGATCCTCCTGCACCCACCATCTAGATTTCTGGGCTGTTCCTaGATTCCACCTCTACCTGAA +
Preference number: 4 (lower is better)
Translates to: SFPCLVMEGQILLHPPSRFLGCS*IPPLPE
Trigger: TTCAGGTAGAGGTGGAATCCAGGAACAGCCCAGAAA...TCTAGATGGTGGGTGCAGGAGGATCTGTCCCTCCATCACAAGGCAGGGAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR TCA 90 bp CCAGGGACCCTCAAGAAGTCTGGGGCTTCTTTTCAGGAAGTCAAGAGTCTTAAGGATTCCACCTCTACCTaGAGGGAAATGGTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: PGTLKKSGASFQEVKSLKDSTST*REMVSP
Trigger: TGGAGAGACCATTTCCCTTCAGGTAGAGGTGGAATC...CTTAAGACTCTTGACTTCCTGAAAAGAAGCCCCAGACTTCTTGAGGGTCCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR GCA 90 bp CTGACTCTGAGGCATACTTGGTCACGATCAGATTCCATTTCCTGTCAACAGGCATTCCTCACTACCCCTTaGAGGCCTTTGATGCCTGAC +
Preference number: 4 (lower is better)
Translates to: LTLRHTWSRSDSISCQQAFLTTP*RPLMPD
Trigger: GTCAGGCATCAAAGGCCTGCAAGGGGTAGTGAGGAA...TGCCTGTTGACAGGAAATGGAATCTGATCGTGACCAAGTATGCCTCAGAGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR GCA 90 bp CAGACTCCAGTCATTAAGAGTTCAGAAAGGGCAAGTGCTGGGCTCAGAAGATCTTTCCTCACTACCCCTTaGAGGCCTTTGATGCCTGAC +
Preference number: 4 (lower is better)
Translates to: QTPVIKSSERASAGLRRSFLTTP*RPLMPD
Trigger: GTCAGGCATCAAAGGCCTGCAAGGGGTAGTGAGGAA...AGATCTTCTGAGCCCAGCACTTGCCCTTTCTGAACTCTTAATGACTGGAGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR GCA 90 bp TCTTTTCCCTGCCTTGTGATGGAGGGACAGATCCTCCTGCACCCACCATCTAGACCGACATCATGTTGTTaGACTGGAAACCTGTGGATA +
Preference number: 4 (lower is better)
Translates to: SFPCLVMEGQILLHPPSRPTSCC*TGNLWI
Trigger: TATCCACAGGTTTCCAGTGCAACAACATGATGTCGG...TCTAGATGGTGGGTGCAGGAGGATCTGTCCCTCCATCACAAGGCAGGGAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR GCA 90 bp TCCCTACTACACAGCCACGGCATGAAGAAAAAGAAATACTTAGACCGAGCAGCCATCACCTCGTGGATGTaGTGGCAGAAAGCAGGCACT +
Preference number: 4 (lower is better)
Translates to: SLLHSHGMKKKKYLDRAAITSWM*WQKAGT
Trigger: AGTGCCTGCTTTCTGCCAGCACATCCACGAGGTGAT...GGCTGCTCGGTCTAAGTATTTCTTTTTCTTCATGCCGTGGCTGTGTAGTAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111178.2
CDS-3UTR CCA 90 bp AGCTGCTCCCAGCACACCAAGTCACATAGGGACAGGGAGGTAGCACATAGGGAATGTCCTCTTCAATGTTaGCGAACTTCACAAACGAGT +
Preference number: 4 (lower is better)
Translates to: SCSQHTKSHRDREVAHRECPLQC*RTSQTS
Trigger: ACTCGTTTGTGAAGTTCGCCAACATTGAAGAGGACA...TTCCCTATGTGCTACCTCCCTGTCCCTATGTGACTTGGTGTGCTGGGAGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp TGGGGGTGGGGTAGGGACTGCTTGGCCTTAATAGGTTTGTTGGCTCCTTTGGATGGTTCCCAAAGAGAGTaGTTATCCAGGTGGATAAGA +
Preference number: 4 (lower is better)
Translates to: WGWGRDCLALIGLLAPLDGSQRE*LSRWIR
Trigger: TCTTATCCACCTGGATAACCACTCTCTTTGGGAACC...ATCCAAAGGAGCCAACAAACCTATTAAGGCCAAGCAGTCCCTACCCCACCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp GCTCAGCTTTCTCTCATCCCAGAGGCTGTGGAAACAAAGACATCAGGGACCAAAGGGTGGCAAACACTTTaGGTTCCCAAAGAGAGTGGT +
Preference number: 4 (lower is better)
Translates to: AQLSLIPEAVETKTSGTKGWQTL*VPKESG
Trigger: ACCACTCTCTTTGGGAACCCAAAGTGTTTGCCACCC...TTTGGTCCCTGATGTCTTTGTTTCCACAGCCTCTGGGATGAGAGAAAGCTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp CCCAGAATCACGATCAGGGCCTCCCATGATTTCCCTCTGCAGTCTTTAGACAAGTTCAGCAACATGATCTaGGTCAGCCGGTTCCTATTC +
Preference number: 4 (lower is better)
Translates to: PRITIRASHDFPLQSLDKFSNMI*VSRFLF
Trigger: GAATAGGAACCGGCTGACCCAGATCATGTTGCTGAA...CTTGTCTAAAGACTGCAGAGGGAAATCATGGGAGGCCCTGATCGTGATTCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp CCATGTGCCAGACTCCAGTCATTAAGAGTTCAGAAAGGGCAAGTGCTGGGCTCATTGTGGCGGTTGCCATaGCGATCAATGAAACTGATG +
Preference number: 4 (lower is better)
Translates to: PCARLQSLRVQKGQVLGSLWRLP*RSMKLM
Trigger: CATCAGTTTCATTGATCGCCATGGCAACCGCCACAA...TGAGCCCAGCACTTGCCCTTTCTGAACTCTTAATGACTGGAGTCTGGCACATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp TGGGGGTGGGGTAGGGACTGCTTGGCCTTAATAGGTTTGTTGGCTCCTTTGGATCTCAGGAAGCATGTATaGTGCCTCTTTCTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: WGWGRDCLALIGLLAPLDLRKHV*CLFLSG
Trigger: ACCAGAAAGAAAGAGGCACCATACATGCTTCCTGAG...ATCCAAAGGAGCCAACAAACCTATTAAGGCCAAGCAGTCCCTACCCCACCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp TTCTTCTGTTCCCAGGGCAAGGTGAGAGACAGACATATCTGTGTGGGCCTGGAGGATTCTGAGACAACCTaGGCTTTTCCACAAACACGT +
Preference number: 4 (lower is better)
Translates to: FFCSQGKVRDRHICVGLEDSETT*AFPQTR
Trigger: ACGTGTTTGTGGAAAAGCCCAGGTTGTCTCAGAATC...CTCCAGGCCCACACAGATATGTCTGTCTCTCACCTTGCCCTGGGAACAGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp CCAGGGACCCTCAAGAAGTCTGGGGCTTCTTTTCAGGAAGTCAAGAGTCTTAAGTCGCTCCTCTTTTTCTaGGCTGTTCCTGGATTCCAC +
Preference number: 4 (lower is better)
Translates to: PGTLKKSGASFQEVKSLKSLLFF*AVPGFH
Trigger: GTGGAATCCAGGAACAGCCCAGAAAAAGAGGAGCGA...CTTAAGACTCTTGACTTCCTGAAAAGAAGCCCCAGACTTCTTGAGGGTCCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp CCATGTGCCAGACTCCAGTCATTAAGAGTTCAGAAAGGGCAAGTGCTGGGCTCACCACACTGTCCACAATaGCCTTCTTCAGTGTCTCAT +
Preference number: 4 (lower is better)
Translates to: PCARLQSLRVQKGQVLGSPHCPQ*PSSVSH
Trigger: ATGAGACACTGAAGAAGGCCATTGTGGACAGTGTGG...TGAGCCCAGCACTTGCCCTTTCTGAACTCTTAATGACTGGAGTCTGGCACATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR CAA 72 bp CACCCACCATCTAGACTTCCTGACTCTGAGGCATACTaGGTCACGATCAGATTCCATTTCCTGTCAACAGGC +
Preference number: 4 (lower is better)
Translates to: HPPSRLPDSEAY*VTIRFHFLSTG
Trigger: GCCTGTTGACAGGAAATGGAATCTGATCGTGACCAAGTATGCCTCAGAGTCAGGAAGTCTAGATGGTGGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR TCA 90 bp TCCCTACTACACAGCCACGGCATGAAGAAAAAGAAATACTTAGACCGAGCAGCCCAGGTCATCGTGGCTTaGGTGGCACATTTCACTGAA +
Preference number: 4 (lower is better)
Translates to: SLLHSHGMKKKKYLDRAAQVIVA*VAHFTE
Trigger: TTCAGTGAAATGTGCCACTCAAGCCACGATGACCTG...GGCTGCTCGGTCTAAGTATTTCTTTTTCTTCATGCCGTGGCTGTGTAGTAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR TCA 90 bp GCTCAGCTTTCTCTCATCCCAGAGGCTGTGGAAACAAAGACATCAGGGACCAAAACACCATCTAGATTCTaGGACAACCTGGGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: AQLSLIPEAVETKTSGTKTPSRF*DNLGFS
Trigger: GGAAAAGCCCAGGTTGTCTCAGAATCTAGATGGTGT...TTTGGTCCCTGATGTCTTTGTTTCCACAGCCTCTGGGATGAGAGAAAGCTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR TCA 90 bp CCAGGGACCCTCAAGAAGTCTGGGGCTTCTTTTCAGGAAGTCAAGAGTCTTAAGTCAGTGTCTCATAGGTaGTCTCTTCTGCAGGAACTC +
Preference number: 4 (lower is better)
Translates to: PGTLKKSGASFQEVKSLKSVSHR*SLLQEL
Trigger: GAGTTCCTGCAGAAGAGATCACCTATGAGACACTGA...CTTAAGACTCTTGACTTCCTGAAAAGAAGCCCCAGACTTCTTGAGGGTCCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR GCA 90 bp TCCCTACTACACAGCCACGGCATGAAGAAAAAGAAATACTTAGACCGAGCAGCCTCACAAACGAGTTGGTaGCAAGGATCTGCAGGTTCG +
Preference number: 4 (lower is better)
Translates to: SLLHSHGMKKKKYLDRAASQTSW*QGSAGS
Trigger: CGAACCTGCAGATCCTTGGCACCAACTCGTTTGTGA...GGCTGCTCGGTCTAAGTATTTCTTTTTCTTCATGCCGTGGCTGTGTAGTAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111178.2
CDS-3UTR GCA 90 bp CTGACTCTGAGGCATACTTGGTCACGATCAGATTCCATTTCCTGTCAACAGGCAACGATCTTGTCCATGTaGTGTGGGTCCCAGATGTTG +
Preference number: 4 (lower is better)
Translates to: LTLRHTWSRSDSISCQQATILSM*CGSQML
Trigger: CAACATCTGGGACCCACAGCACATGGACAAGATCGT...TGCCTGTTGACAGGAAATGGAATCTGATCGTGACCAAGTATGCCTCAGAGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR GCA 90 bp GATCTTCATCTGTCAGCTGAGGGATGTACGGCAGGCAGAGCCTGTCTGAATTGTAGGAAGCATGTATGGTaGCTCTTTCTTTCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: DLHLSAEGCTAGRACLNCRKHVW*LFLSGL
Trigger: GAGACCAGAAAGAAAGAGGCACCATACATGCTTCCT...ACAATTCAGACAGGCTCTGCCTGCCGTACATCCCTCAGCTGACAGATGAAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219331.2
CDS-3UTR CCA 90 bp GCTCAGCTTTCTCTCATCCCAGAGGCTGTGGAAACAAAGACATCAGGGACCAAAATGGTAGAGAATTTGTaGCGGTTGCCATGGCGATCA +
Preference number: 4 (lower is better)
Translates to: AQLSLIPEAVETKTSGTKMVENL*RLPWRS
Trigger: TGATCGCCATGGCAACCGCCACAAATTCTCTACCAT...TTTGGTCCCTGATGTCTTTGTTTCCACAGCCTCTGGGATGAGAGAAAGCTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp GCTCAGCTTTCTCTCATCCCAGAGGCTGTGGAAACAAAGACATCAGGGACCAAACTACCTGAAGGGAAATaGTCTCTCCAATGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: AQLSLIPEAVETKTSGTKLPEGK*SLQCSS
Trigger: GGAAGAGCATTGGAGAGACCATTTCCCTTCAGGTAG...TTTGGTCCCTGATGTCTTTGTTTCCACAGCCTCTGGGATGAGAGAAAGCTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR TCA 90 bp TCCCTACTACACAGCCACGGCATGAAGAAAAAGAAATACTTAGACCGAGCAGCCTGGGAGTGCTGCGGCTaGATTGAGTACATGATGATT +
Preference number: 4 (lower is better)
Translates to: SLLHSHGMKKKKYLDRAAWECCG*IEYMMI
Trigger: AATCATCATGTACTCAATTCAGCCGCAGCACTCCCA...GGCTGCTCGGTCTAAGTATTTCTTTTTCTTCATGCCGTGGCTGTGTAGTAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR TCA 90 bp CCATGTGCCAGACTCCAGTCATTAAGAGTTCAGAAAGGGCAAGTGCTGGGCTCATTTCAAAGATCTGGTTaGGTTTACTCTGCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: PCARLQSLRVQKGQVLGSFQRSG*VYSAAV
Trigger: CACTGCTGCAGAGTAAACTCAACCAGATCTTTGAAA...TGAGCCCAGCACTTGCCCTTTCTGAACTCTTAATGACTGGAGTCTGGCACATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp TCCCTACTACACAGCCACGGCATGAAGAAAAAGAAATACTTAGACCGAGCAGCCACTTCACAAACGAGTTaGTGCCAAGGATCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: SLLHSHGMKKKKYLDRAATSQTS*CQGSAG
Trigger: ACCTGCAGATCCTTGGCACCAACTCGTTTGTGAAGT...GGCTGCTCGGTCTAAGTATTTCTTTTTCTTCATGCCGTGGCTGTGTAGTAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111178.2
CDS-3UTR CCA 90 bp TCCCTACTACACAGCCACGGCATGAAGAAAAAGAAATACTTAGACCGAGCAGCCCTACCTGAAGGGAAATaGTCTCTCCAATGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SLLHSHGMKKKKYLDRAALPEGK*SLQCSS
Trigger: GGAAGAGCATTGGAGAGACCATTTCCCTTCAGGTAG...GGCTGCTCGGTCTAAGTATTTCTTTTTCTTCATGCCGTGGCTGTGTAGTAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR GCA 90 bp TCCCTACTACACAGCCACGGCATGAAGAAAAAGAAATACTTAGACCGAGCAGCCCCGACATCATGTTGTTaGACTGGAAACCTGTGGATA +
Preference number: 4 (lower is better)
Translates to: SLLHSHGMKKKKYLDRAAPTSCC*TGNLWI
Trigger: TATCCACAGGTTTCCAGTGCAACAACATGATGTCGG...GGCTGCTCGGTCTAAGTATTTCTTTTTCTTCATGCCGTGGCTGTGTAGTAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR GCA 90 bp CAGTTTAGAAGGCTAAGTCTTGTTGTTGGACACCTTTTATTCCATACTATCCTTGAGGTTCAGGTAGGCTaGGCCCAGAGCATAGAGCGC +
Preference number: 4 (lower is better)
Translates to: QFRRLSLVVGHLLFHTILEVQVG*AQSIER
Trigger: GCGCTCTATGCTCTGGGCGCAGCCTACCTGAACCTC...AAGGATAGTATGGAATAAAAGGTGTCCAACAACAAGACTTAGCCTTCTAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000219331.2
CDS-3UTR GCA 90 bp CTGACTCTGAGGCATACTTGGTCACGATCAGATTCCATTTCCTGTCAACAGGCAAAATGGTCTCTCCAATaGTCTTCCTCTTGGACAAGC +
Preference number: 4 (lower is better)
Translates to: LTLRHTWSRSDSISCQQAKWSLQ*SSSWTS
Trigger: GCTTGTCCAAGAGGAAGAGCATTGGAGAGACCATTT...TGCCTGTTGACAGGAAATGGAATCTGATCGTGACCAAGTATGCCTCAGAGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp CTGACTCTGAGGCATACTTGGTCACGATCAGATTCCATTTCCTGTCAACAGGCAATTTCCAGGTCATCGTaGCTTGAGTGGCACATTTCA +
Preference number: 4 (lower is better)
Translates to: LTLRHTWSRSDSISCQQAISRSS*LEWHIS
Trigger: TGAAATGTGCCACTCAAGCCACGATGACCTGGAAAT...TGCCTGTTGACAGGAAATGGAATCTGATCGTGACCAAGTATGCCTCAGAGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp CTGACTCTGAGGCATACTTGGTCACGATCAGATTCCATTTCCTGTCAACAGGCACTCAGGAAGCATGTATaGTGCCTCTTTCTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: LTLRHTWSRSDSISCQQALRKHV*CLFLSG
Trigger: ACCAGAAAGAAAGAGGCACCATACATGCTTCCTGAG...TGCCTGTTGACAGGAAATGGAATCTGATCGTGACCAAGTATGCCTCAGAGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR TCA 90 bp TCCCTACTACACAGCCACGGCATGAAGAAAAAGAAATACTTAGACCGAGCAGCCTTTCAAAGATCTGGTTaGGTTTACTCTGCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: SLLHSHGMKKKKYLDRAAFQRSG*VYSAAV
Trigger: CACTGCTGCAGAGTAAACTCAACCAGATCTTTGAAA...GGCTGCTCGGTCTAAGTATTTCTTTTTCTTCATGCCGTGGCTGTGTAGTAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp TCCCTACTACACAGCCACGGCATGAAGAAAAAGAAATACTTAGACCGAGCAGCCTGTCCTCTTCAATGTTaGCGAACTTCACAAACGAGT +
Preference number: 4 (lower is better)
Translates to: SLLHSHGMKKKKYLDRAACPLQC*RTSQTS
Trigger: ACTCGTTTGTGAAGTTCGCCAACATTGAAGAGGACA...GGCTGCTCGGTCTAAGTATTTCTTTTTCTTCATGCCGTGGCTGTGTAGTAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp CCAGGGACCCTCAAGAAGTCTGGGGCTTCTTTTCAGGAAGTCAAGAGTCTTAAGGTGATTTCAAAGATCTaGTTGAGTTTACTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PGTLKKSGASFQEVKSLKVISKI*LSLLCS
Trigger: GCTGCAGAGTAAACTCAACCAGATCTTTGAAATCAC...CTTAAGACTCTTGACTTCCTGAAAAGAAGCCCCAGACTTCTTGAGGGTCCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR CAA 72 bp TGGATTCTGGTTTACAATAGGGAAAGAGAACAGAATTaGAGACAGTGCGATCAGACACCAGGGGCTAGAAAA +
Preference number: 4 (lower is better)
Translates to: WILVYNREREQN*RQCDQTPGARK
Trigger: TTTTCTAGCCCCTGGTGTCTGATCGCACTGTCTCAAATTCTGTTCTCTTTCCCTATTGTAAACCAGAATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
3UTR CAA 72 bp CCTAAATTTTATTCCCAGATTCCGAGGACAGAATTCTaGCTTTGGTGCAATCTGCTTGCTGGAGAAGGTCAA +
Preference number: 4 (lower is better)
Translates to: PKFYSQIPRTEF*LWCNLLAGEGQ
Trigger: TTGACCTTCTCCAGCAAGCAGATTGCACCAAAGCAAGAATTCTGTCCTCGGAATCTGGGAATAAAATTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CCA 90 bp CAGTTTAGAAGGCTAAGTCTTGTTGTTGGACACCTTTTATTCCATACTATCCTTCTCAGGAAGCATGTATaGTGCCTCTTTCTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: QFRRLSLVVGHLLFHTILLRKHV*CLFLSG
Trigger: ACCAGAAAGAAAGAGGCACCATACATGCTTCCTGAG...AAGGATAGTATGGAATAAAAGGTGTCCAACAACAAGACTTAGCCTTCTAAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000219331.2
CDS GCA 90 bp GGCCGCCCGGCCCAGGAGCTCCCTCAGGCACCTCTCAGCCAGTTCTaGTGGGTTCTCCTTTTCCTTCTCTGGTGCTTGGAGGGGCGAGGG +
Preference number: 5 (lower is better)
Translates to: GRPAQELPQAPLSQF*WVLLFLLWCLEGRG
Trigger: CCCTCGCCCCTCCAAGCACCAGAGAAGGAAAAGGAGAACCCAGCAGAACTGGCTGAGAGGTGCCTGAGGGAGCTCCTGGGCCGGGCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp GAGTGGTGTTGGGGTGTTGTCCTCAGGGACCTGAGATCATGCAGGCCATGCTGGAGGCGGTCCAGGAAGTaGCTGGGCAGGGCCGACATC +
Preference number: 5 (lower is better)
Translates to: EWCWGVVLRDLRSCRPCWRRSRK*LGRADI
Trigger: GATGTCGGCCCTGCCCAGCAACTTCCTGGACCGCCT...CCAGCATGGCCTGCATGATCTCAGGTCCCTGAGGACAACACCCCAACACCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS GCA 90 bp GCACCTCTCAGCCAGTTCTGCTGGGTTCTCCTTTTCCTTCTCTGGTaGTTGGAGGGGCGAGGGAGACCGGCTCTCTGCCTCTTCCACGTG +
Preference number: 5 (lower is better)
Translates to: APLSQFCWVLLFLLW*LEGRGRPALCLFHV
Trigger: CACGTGGAAGAGGCAGAGAGCCGGTCTCCCTCGCCCCTCCAAGCACCAGAGAAGGAAAAGGAGAACCCAGCAGAACTGGCTGAGAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp TGGGCTCAGAAGATCTCCGTGCTCCCTGAGGAGCCAGGCTGGTGCCCAGAATCAAGCGACGGGACGATCTaGTCCATGTGCTGTGGGTCC +
Preference number: 5 (lower is better)
Translates to: WAQKISVLPEEPGWCPESSDGTI*SMCCGS
Trigger: GGACCCACAGCACATGGACAAGATCGTCCCGTCGCT...TGATTCTGGGCACCAGCCTGGCTCCTCAGGGAGCACGGAGATCTTCTGAGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp GAGTGGTGTTGGGGTGTTGTCCTCAGGGACCTGAGATCATGCAGGCCATGCTGGAGGGATGGAGTGGTTTaGCGGCTGGCCGTAGGCTGC +
Preference number: 5 (lower is better)
Translates to: EWCWGVVLRDLRSCRPCWRDGVV*RLAVGC
Trigger: GCAGCCTACGGCCAGCCGCAAAACCACTCCATCCCT...CCAGCATGGCCTGCATGATCTCAGGTCCCTGAGGACAACACCCCAACACCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp GCTCAGCTTTCTCTCATCCCAGAGGCTGTGGAAACAAAGACATCAGGGACCAAAGCCGCGCTGCGGCTGTaGGCGTCCAGGTGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: AQLSLIPEAVETKTSGTKAALRL*ASRWLR
Trigger: CCTGAGCCACCTGGACGCCAACAGCCGCAGCGCGGC...TTTGGTCCCTGATGTCTTTGTTTCCACAGCCTCTGGGATGAGAGAAAGCTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS TCA 90 bp GTCAGCCGGTTCCTATTCTCCCCCGTCCGTCCGGTCTCTACGGGGTaGTGCACAGAAGGCAGCGGGACTTTGCTCATGATGAAGAGGATC +
Preference number: 5 (lower is better)
Translates to: VSRFLFSPVRPVSTG*CTEGSGTLLMMKRI
Trigger: GATCCTCTTCATCATGAGCAAAGTCCCGCTGCCTTCTGTGCATCACCCCGTAGAGACCGGACGGACGGGGGAGAATAGGAACCGGCTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp CAGGACACAGACTCACCACACTCGTGCTTTGCTGAAGCTGCCACCCAGTCTGGGACCCCTTGCAGGCCTTaGATGCCTGACATGCGGATC +
Preference number: 5 (lower is better)
Translates to: QDTDSPHSCFAEAATQSGTPCRP*MPDMRI
Trigger: GATCCGCATGTCAGGCATCAAAGGCCTGCAAGGGGT...CCCAGACTGGGTGGCAGCTTCAGCAAAGCACGAGTGTGGTGAGTCTGTGTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp GAGTGGTGTTGGGGTGTTGTCCTCAGGGACCTGAGATCATGCAGGCCATGCTGGACCCCTTGCAGGCCTTaGATGCCTGACATGCGGATC +
Preference number: 5 (lower is better)
Translates to: EWCWGVVLRDLRSCRPCWTPCRP*MPDMRI
Trigger: GATCCGCATGTCAGGCATCAAAGGCCTGCAAGGGGT...CCAGCATGGCCTGCATGATCTCAGGTCCCTGAGGACAACACCCCAACACCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp GAGTGGTGTTGGGGTGTTGTCCTCAGGGACCTGAGATCATGCAGGCCATGCTGGGGCTTGATGGCGTTCTaGATATTGCCGAAGGCCGCC +
Preference number: 5 (lower is better)
Translates to: EWCWGVVLRDLRSCRPCWGLMAF*ILPKAA
Trigger: GGCGGCCTTCGGCAATATCAAGAACGCCATCAAGCC...CCAGCATGGCCTGCATGATCTCAGGTCCCTGAGGACAACACCCCAACACCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp TCCCTACTACACAGCCACGGCATGAAGAAAAAGAAATACTTAGACCGAGCAGCCGCCGCGCTGCGGCTGTaGGCGTCCAGGTGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: SLLHSHGMKKKKYLDRAAAALRL*ASRWLR
Trigger: CCTGAGCCACCTGGACGCCAACAGCCGCAGCGCGGC...GGCTGCTCGGTCTAAGTATTTCTTTTTCTTCATGCCGTGGCTGTGTAGTAGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp GAGTGGTGTTGGGGTGTTGTCCTCAGGGACCTGAGATCATGCAGGCCATGCTGGTGCTCCTTGATGATCTaGGAGCCCAGGCTCACAGCG +
Preference number: 5 (lower is better)
Translates to: EWCWGVVLRDLRSCRPCWCSLMI*EPRLTA
Trigger: CGCTGTGAGCCTGGGCTCCAAGATCATCAAGGAGCA...CCAGCATGGCCTGCATGATCTCAGGTCCCTGAGGACAACACCCCAACACCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp TGGGCTCAGAAGATCTCCGTGCTCCCTGAGGAGCCAGGCTGGTGCCCAGAATCAACCACCACCTCCTCGTaGGCCAGCTCAATGCTTATG +
Preference number: 5 (lower is better)
Translates to: WAQKISVLPEEPGWCPESTTTSS*ASSMLM
Trigger: CATAAGCATTGAGCTGGCCAACGAGGAGGTGGTGGT...TGATTCTGGGCACCAGCCTGGCTCCTCAGGGAGCACGGAGATCTTCTGAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS GCA 90 bp GACGGGACGATCTTGTCCATGTGCTGTGGGTCCCAGATGTTGGCCTaGAGCTCGTCATTCACTGTCTTCCTCACTACCCCTTGCAGGCCT +
Preference number: 5 (lower is better)
Translates to: DGTILSMCCGSQMLA*SSSFTVFLTTPCRP
Trigger: AGGCCTGCAAGGGGTAGTGAGGAAGACAGTGAATGACGAGCTGCAGGCCAACATCTGGGACCCACAGCACATGGACAAGATCGTCCCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp TGGGCTCAGAAGATCTCCGTGCTCCCTGAGGAGCCAGGCTGGTGCCCAGAATCAAGGGCCGACATCATGTaGTTGCACTGGAAACCTGTG +
Preference number: 5 (lower is better)
Translates to: WAQKISVLPEEPGWCPESRADIM*LHWKPV
Trigger: CACAGGTTTCCAGTGCAACAACATGATGTCGGCCCT...TGATTCTGGGCACCAGCCTGGCTCCTCAGGGAGCACGGAGATCTTCTGAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp GAGTGGTGTTGGGGTGTTGTCCTCAGGGACCTGAGATCATGCAGGCCATGCTGGACCACCACCTCCTCGTaGGCCAGCTCAATGCTTATG +
Preference number: 5 (lower is better)
Translates to: EWCWGVVLRDLRSCRPCWTTTSS*ASSMLM
Trigger: CATAAGCATTGAGCTGGCCAACGAGGAGGTGGTGGT...CCAGCATGGCCTGCATGATCTCAGGTCCCTGAGGACAACACCCCAACACCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS TCA 90 bp CACAGAAGGCAGCGGGACTTTGCTCATGATGAAGAGGATCACCTCTaGGCGCTGGTAGGTCGGCAGTGTGCTGGCAAAGGAGCCGATAGT +
Preference number: 5 (lower is better)
Translates to: HRRQRDFAHDEEDHL*ALVGRQCAGKGADS
Trigger: ACTATCGGCTCCTTTGCCAGCACACTGCCGACCTACCAGCGCTCAGAGGTGATCCTCTTCATCATGAGCAAAGTCCCGCTGCCTTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS CCA 90 bp CCCACAGCAGCATCTGAAGGCAAGGTCCTATTGGGATGGCGCCCCTaGGCTTTTCCACAAACACGTCCTCAGGAAGCATGTATGGTGCCT +
Preference number: 5 (lower is better)
Translates to: PTAASEGKVLLGWRP*AFPQTRPQEACMVP
Trigger: AGGCACCATACATGCTTCCTGAGGACGTGTTTGTGGAAAAGCCCAGGGGCGCCATCCCAATAGGACCTTGCCTTCAGATGCTGCTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000219331.2
CDS-3UTR CAA 90 bp AACTGGAAGGCACCACGACCCAGGGACCCTCAAGAAGTCTGGGGCTTCTTTTCATTGTCCACCAGCCTCTaGTACCTGGGACGAAGGGCA +
Preference number: 5 (lower is better)
Translates to: NWKAPRPRDPQEVWGFFSLSTSL*YLGRRA
Trigger: TGCCCTTCGTCCCAGGTACAAGAGGCTGGTGGACAA...TGAAAAGAAGCCCCAGACTTCTTGAGGGTCCCTGGGTCGTGGTGCCTTCCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111178.2
CDS-3UTR CAA 90 bp TCTTTTCCCTGCCTTGTGATGGAGGGACAGATCCTCCTGCACCCACCATCTAGAAGCGACGGGACGATCTaGTCCATGTGCTGTGGGTCC +
Preference number: 5 (lower is better)
Translates to: SFPCLVMEGQILLHPPSRSDGTI*SMCCGS
Trigger: GGACCCACAGCACATGGACAAGATCGTCCCGTCGCT...TCTAGATGGTGGGTGCAGGAGGATCTGTCCCTCCATCACAAGGCAGGGAAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp CCATGTGCCAGACTCCAGTCATTAAGAGTTCAGAAAGGGCAAGTGCTGGGCTCATTCCTTCTCTGGTGCTaGGAGGGGCGAGGGAGACCG +
Preference number: 5 (lower is better)
Translates to: PCARLQSLRVQKGQVLGSFLLWC*EGRGRP
Trigger: CGGTCTCCCTCGCCCCTCCAAGCACCAGAGAAGGAA...TGAGCCCAGCACTTGCCCTTTCTGAACTCTTAATGACTGGAGTCTGGCACATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS GCA 90 bp ACGTGCTGCAGATTGAAAAGCAGCGACGGGACGATCTTGTCCATGTaGTGTGGGTCCCAGATGTTGGCCTGCAGCTCGTCATTCACTGTC +
Preference number: 5 (lower is better)
Translates to: TCCRLKSSDGTILSM*CGSQMLACSSSFTV
Trigger: GACAGTGAATGACGAGCTGCAGGCCAACATCTGGGACCCACAGCACATGGACAAGATCGTCCCGTCGCTGCTTTTCAATCTGCAGCACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS GCA 90 bp GAAGGCGGTCCAGGAAGTTGCTGGGCAGGGCCGACATCATGTTGTTaGACTGGAAACCTGTGGATACCTGAAGGAGGGACTTCAGCAACA +
Preference number: 5 (lower is better)
Translates to: EGGPGSCWAGPTSCC*TGNLWIPEGGTSAT
Trigger: TGTTGCTGAAGTCCCTCCTTCAGGTATCCACAGGTTTCCAGTGCAACAACATGATGTCGGCCCTGCCCAGCAACTTCCTGGACCGCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS GCA 90 bp GAAAGCAGGCACTGTTGTGAGCTGGCTGATGAGGTTCAGGTAGGCTaGGCCCAGAGCATAGAGCGCACAGCGGTTATAGGTAGGCAGATT +
Preference number: 5 (lower is better)
Translates to: ESRHCCELADEVQVG*AQSIERTAVIGRQI
Trigger: AATCTGCCTACCTATAACCGCTGTGCGCTCTATGCTCTGGGCGCAGCCTACCTGAACCTCATCAGCCAGCTCACAACAGTGCCTGCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000219331.2
CDS CCA 90 bp GGCAGTGTGCTGGCAAAGGAGCCGATAGTTTTGATGACGGCCTCCTaGAACATGCACTCCTCATGCTCCTTGATGATCTTGGAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: GSVLAKEPIVLMTAS*NMHSSCSLMILEPR
Trigger: CCTGGGCTCCAAGATCATCAAGGAGCATGAGGAGTGCATGTTCCAGGAGGCCGTCATCAAAACTATCGGCTCCTTTGCCAGCACACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp CAGGACACAGACTCACCACACTCGTGCTTTGCTGAAGCTGCCACCCAGTCTGGGGTCAGTTTCTCCATGTaGGTCTTCACCAGACCATCC +
Preference number: 5 (lower is better)
Translates to: QDTDSPHSCFAEAATQSGVSFSM*VFTRPS
Trigger: GGATGGTCTGGTGAAGACCAACATGGAGAAACTGAC...CCCAGACTGGGTGGCAGCTTCAGCAAAGCACGAGTGTGGTGAGTCTGTGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111178.2
CDS-3UTR CAA 90 bp ACCCCAAGCTTCCTCTGGACAGAGATGTGGGAAGATGCTACGCAGCCAGGACACCTTTCCACGAAGAGGTaGATACTCTGGCAGTGGCAG +
Preference number: 5 (lower is better)
Translates to: TPSFLWTEMWEDATQPGHLSTKR*ILWQWQ
Trigger: CTGCCACTGCCAGAGTATCAACCTCTTCGTGGAAAG...GTGTCCTGGCTGCGTAGCATCTTCCCACATCTCTGTCCAGAGGAAGCTTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111178.2
CDS-3UTR CAA 90 bp AGCTGCTCCCAGCACACCAAGTCACATAGGGACAGGGAGGTAGCACATAGGGAACACTCCTCATGCTCCTaGATGATCTTGGAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: SCSQHTKSHRDREVAHREHSSCS*MILEPR
Trigger: CCTGGGCTCCAAGATCATCAAGGAGCATGAGGAGTG...TTCCCTATGTGCTACCTCCCTGTCCCTATGTGACTTGGTGTGCTGGGAGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp ACCCCAAGCTTCCTCTGGACAGAGATGTGGGAAGATGCTACGCAGCCAGGACACAAGGAGCCGATAGTTTaGATGACGGCCTCCTGGAAC +
Preference number: 5 (lower is better)
Translates to: TPSFLWTEMWEDATQPGHKEPIV*MTASWN
Trigger: GTTCCAGGAGGCCGTCATCAAAACTATCGGCTCCTT...GTGTCCTGGCTGCGTAGCATCTTCCCACATCTCTGTCCAGAGGAAGCTTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp CAGACTCCAGTCATTAAGAGTTCAGAAAGGGCAAGTGCTGGGCTCAGAAGATCTAGGCGGTCCAGGAAGTaGCTGGGCAGGGCCGACATC +
Preference number: 5 (lower is better)
Translates to: QTPVIKSSERASAGLRRSRRSRK*LGRADI
Trigger: GATGTCGGCCCTGCCCAGCAACTTCCTGGACCGCCT...AGATCTTCTGAGCCCAGCACTTGCCCTTTCTGAACTCTTAATGACTGGAGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp CAGGACACAGACTCACCACACTCGTGCTTTGCTGAAGCTGCCACCCAGTCTGGGAGGACCTCACTGATTTaGCTCTGGCGGAAGAGAAAC +
Preference number: 5 (lower is better)
Translates to: QDTDSPHSCFAEAATQSGRTSLI*LWRKRN
Trigger: GTTTCTCTTCCGCCAGAGCAAAATCAGTGAGGTCCT...CCCAGACTGGGTGGCAGCTTCAGCAAAGCACGAGTGTGGTGAGTCTGTGTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp CCAGGGACCCTCAAGAAGTCTGGGGCTTCTTTTCAGGAAGTCAAGAGTCTTAAGAGGGATGGAGTGGTTTaGCGGCTGGCCGTAGGCTGC +
Preference number: 5 (lower is better)
Translates to: PGTLKKSGASFQEVKSLKRDGVV*RLAVGC
Trigger: GCAGCCTACGGCCAGCCGCAAAACCACTCCATCCCT...CTTAAGACTCTTGACTTCCTGAAAAGAAGCCCCAGACTTCTTGAGGGTCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS CCA 90 bp CTGCAGATTGAAAAGCAGCGACGGGACGATCTTGTCCATGTGCTGTaGGTCCCAGATGTTGGCCTGCAGCTCGTCATTCACTGTCTTCCT +
Preference number: 5 (lower is better)
Translates to: LQIEKQRRDDLVHVL*VPDVGLQLVIHCLP
Trigger: AGGAAGACAGTGAATGACGAGCTGCAGGCCAACATCTGGGACCCACAGCACATGGACAAGATCGTCCCGTCGCTGCTTTTCAATCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp ACCCCAAGCTTCCTCTGGACAGAGATGTGGGAAGATGCTACGCAGCCAGGACACAGCTTGGCCACCATTTaGAGGAAGCTTTCCACGAAG +
Preference number: 5 (lower is better)
Translates to: TPSFLWTEMWEDATQPGHSLATI*RKLSTK
Trigger: CTTCGTGGAAAGCTTCCTCAAAATGGTGGCCAAGCT...GTGTCCTGGCTGCGTAGCATCTTCCCACATCTCTGTCCAGAGGAAGCTTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111178.2
CDS-3UTR CAA 90 bp GAGTGGTGTTGGGGTGTTGTCCTCAGGGACCTGAGATCATGCAGGCCATGCTGGGTGTCCTCTTCAATGTaGGCGAACTTCACAAACGAG +
Preference number: 5 (lower is better)
Translates to: EWCWGVVLRDLRSCRPCWVSSSM*ANFTNE
Trigger: CTCGTTTGTGAAGTTCGCCAACATTGAAGAGGACAC...CCAGCATGGCCTGCATGATCTCAGGTCCCTGAGGACAACACCCCAACACCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp TCTTTTCCCTGCCTTGTGATGGAGGGACAGATCCTCCTGCACCCACCATCTAGACGGGTGGCAAACACTTaGGGTTCCCAAAGAGAGTGG +
Preference number: 5 (lower is better)
Translates to: SFPCLVMEGQILLHPPSRRVANT*GSQREW
Trigger: CCACTCTCTTTGGGAACCCAAAGTGTTTGCCACCCG...TCTAGATGGTGGGTGCAGGAGGATCTGTCCCTCCATCACAAGGCAGGGAAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp CCATGTGCCAGACTCCAGTCATTAAGAGTTCAGAAAGGGCAAGTGCTGGGCTCATGCCGCAGCAGGGTGTaGAACATCTCCAGTACCGTG +
Preference number: 5 (lower is better)
Translates to: PCARLQSLRVQKGQVLGSCRSRV*NISSTV
Trigger: CACGGTACTGGAGATGTTCAACACCCTGCTGCGGCA...TGAGCCCAGCACTTGCCCTTTCTGAACTCTTAATGACTGGAGTCTGGCACATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp AACTGGAAGGCACCACGACCCAGGGACCCTCAAGAAGTCTGGGGCTTCTTTTCACTGATGGTAGAGAATTaGTGGCGGTTGCCATGGCGA +
Preference number: 5 (lower is better)
Translates to: NWKAPRPRDPQEVWGFFSLMVEN*WRLPWR
Trigger: TCGCCATGGCAACCGCCACAAATTCTCTACCATCAG...TGAAAAGAAGCCCCAGACTTCTTGAGGGTCCCTGGGTCGTGGTGCCTTCCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp CAGGACACAGACTCACCACACTCGTGCTTTGCTGAAGCTGCCACCCAGTCTGGGCCAATGCTCTTCCTCTaGGACAAGCGATCTTCATCT +
Preference number: 5 (lower is better)
Translates to: QDTDSPHSCFAEAATQSGPMLFL*DKRSSS
Trigger: AGATGAAGATCGCTTGTCCAAGAGGAAGAGCATTGG...CCCAGACTGGGTGGCAGCTTCAGCAAAGCACGAGTGTGGTGAGTCTGTGTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS GCA 90 bp CTCGTTGGCCAGCTCAATGCTTATGAGGGCCAGCAGGCCATAGAGTaGCTCATAGTGTTTCTGGATGTTCGTCTCCTCCTTACAGCTCAG +
Preference number: 5 (lower is better)
Translates to: LVGQLNAYEGQQAIE*LIVFLDVRLLLTAQ
Trigger: CTGAGCTGTAAGGAGGAGACGAACATCCAGAAACACTATGAGGCACTCTATGGCCTGCTGGCCCTCATAAGCATTGAGCTGGCCAACGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp GCTCAGCTTTCTCTCATCCCAGAGGCTGTGGAAACAAAGACATCAGGGACCAAATGTGGGTCCCAGATGTaGGCCTGCAGCTCGTCATTC +
Preference number: 5 (lower is better)
Translates to: AQLSLIPEAVETKTSGTKCGSQM*ACSSSF
Trigger: GAATGACGAGCTGCAGGCCAACATCTGGGACCCACA...TTTGGTCCCTGATGTCTTTGTTTCCACAGCCTCTGGGATGAGAGAAAGCTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp GCTCAGCTTTCTCTCATCCCAGAGGCTGTGGAAACAAAGACATCAGGGACCAAAGGCTTGATGGCGTTCTaGATATTGCCGAAGGCCGCC +
Preference number: 5 (lower is better)
Translates to: AQLSLIPEAVETKTSGTKGLMAF*ILPKAA
Trigger: GGCGGCCTTCGGCAATATCAAGAACGCCATCAAGCC...TTTGGTCCCTGATGTCTTTGTTTCCACAGCCTCTGGGATGAGAGAAAGCTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp GCTCAGCTTTCTCTCATCCCAGAGGCTGTGGAAACAAAGACATCAGGGACCAAATGCCGCAGCAGGGTGTaGAACATCTCCAGTACCGTG +
Preference number: 5 (lower is better)
Translates to: AQLSLIPEAVETKTSGTKCRSRV*NISSTV
Trigger: CACGGTACTGGAGATGTTCAACACCCTGCTGCGGCA...TTTGGTCCCTGATGTCTTTGTTTCCACAGCCTCTGGGATGAGAGAAAGCTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp GAGGCTTCCCAGGCCCTTCTGCTTCTCAATGGAGATGTCCTTGTGATTCTCTGTTCCTGCCGGGAGCACTaGTCCACTTTCAACTTCAGG +
Preference number: 5 (lower is better)
Translates to: EASQALLLLNGDVLVILCSCREH*STFNFR
Trigger: CCTGAAGTTGAAAGTGGACAAGTGCTCCCGGCAGGA...ACAGAGAATCACAAGGACATCTCCATTGAGAAGCAGAAGGGCCTGGGAAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS GCA 90 bp TGCCTGTATAGCTGCTGGGAGTGCTTCTTCATGAAGACAGTGTCCTaGCGGGAGCACTTGTCCACTTTCAACTTCAGGACCGAGATGTCA +
Preference number: 5 (lower is better)
Translates to: CLYSCWECFFMKTVS*REHLSTFNFRTEMS
Trigger: TGACATCTCGGTCCTGAAGTTGAAAGTGGACAAGTGCTCCCGGCAGGACACTGTCTTCATGAAGAAGCACTCCCAGCAGCTATACAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp CTGACTCTGAGGCATACTTGGTCACGATCAGATTCCATTTCCTGTCAACAGGCATGTGGGTCCCAGATGTaGGCCTGCAGCTCGTCATTC +
Preference number: 5 (lower is better)
Translates to: LTLRHTWSRSDSISCQQACGSQM*ACSSSF
Trigger: GAATGACGAGCTGCAGGCCAACATCTGGGACCCACA...TGCCTGTTGACAGGAAATGGAATCTGATCGTGACCAAGTATGCCTCAGAGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp TCCCTACTACACAGCCACGGCATGAAGAAAAAGAAATACTTAGACCGAGCAGCCTGCTCCTTGATGATCTaGGAGCCCAGGCTCACAGCG +
Preference number: 5 (lower is better)
Translates to: SLLHSHGMKKKKYLDRAACSLMI*EPRLTA
Trigger: CGCTGTGAGCCTGGGCTCCAAGATCATCAAGGAGCA...GGCTGCTCGGTCTAAGTATTTCTTTTTCTTCATGCCGTGGCTGTGTAGTAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp TCTTTTCCCTGCCTTGTGATGGAGGGACAGATCCTCCTGCACCCACCATCTAGAGCCGACATCATGTTGTaGCACTGGAAACCTGTGGAT +
Preference number: 5 (lower is better)
Translates to: SFPCLVMEGQILLHPPSRADIML*HWKPVD
Trigger: ATCCACAGGTTTCCAGTGCAACAACATGATGTCGGC...TCTAGATGGTGGGTGCAGGAGGATCTGTCCCTCCATCACAAGGCAGGGAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp CCATGTGCCAGACTCCAGTCATTAAGAGTTCAGAAAGGGCAAGTGCTGGGCTCACTGATGGTAGAGAATTaGTGGCGGTTGCCATGGCGA +
Preference number: 5 (lower is better)
Translates to: PCARLQSLRVQKGQVLGSLMVEN*WRLPWR
Trigger: TCGCCATGGCAACCGCCACAAATTCTCTACCATCAG...TGAGCCCAGCACTTGCCCTTTCTGAACTCTTAATGACTGGAGTCTGGCACATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp TCTTTTCCCTGCCTTGTGATGGAGGGACAGATCCTCCTGCACCCACCATCTAGAAGGACCTCACTGATTTaGCTCTGGCGGAAGAGAAAC +
Preference number: 5 (lower is better)
Translates to: SFPCLVMEGQILLHPPSRRTSLI*LWRKRN
Trigger: GTTTCTCTTCCGCCAGAGCAAAATCAGTGAGGTCCT...TCTAGATGGTGGGTGCAGGAGGATCTGTCCCTCCATCACAAGGCAGGGAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS GCA 90 bp ATGTTGGCCTGCAGCTCGTCATTCACTGTCTTCCTCACTACCCCTTaGAGGCCTTTGATGCCTGACATGCGGATCTTAGTCTTGATTTCC +
Preference number: 5 (lower is better)
Translates to: MLACSSSFTVFLTTP*RPLMPDMRILVLIS
Trigger: GGAAATCAAGACTAAGATCCGCATGTCAGGCATCAAAGGCCTGCAAGGGGTAGTGAGGAAGACAGTGAATGACGAGCTGCAGGCCAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp CTGACTCTGAGGCATACTTGGTCACGATCAGATTCCATTTCCTGTCAACAGGCATCCGACTCCAGCAGCTaGGCCACCATTTTGAGGAAG +
Preference number: 5 (lower is better)
Translates to: LTLRHTWSRSDSISCQQASDSSS*ATILRK
Trigger: CTTCCTCAAAATGGTGGCCAAGCTGCTGGAGTCGGA...TGCCTGTTGACAGGAAATGGAATCTGATCGTGACCAAGTATGCCTCAGAGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111178.2
CDS-3UTR CAA 90 bp TCCCTACTACACAGCCACGGCATGAAGAAAAAGAAATACTTAGACCGAGCAGCCCGGGTGGCAAACACTTaGGGTTCCCAAAGAGAGTGG +
Preference number: 5 (lower is better)
Translates to: SLLHSHGMKKKKYLDRAARVANT*GSQREW
Trigger: CCACTCTCTTTGGGAACCCAAAGTGTTTGCCACCCG...GGCTGCTCGGTCTAAGTATTTCTTTTTCTTCATGCCGTGGCTGTGTAGTAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp CTGACTCTGAGGCATACTTGGTCACGATCAGATTCCATTTCCTGTCAACAGGCACACTCCTCATGCTCCTaGATGATCTTGGAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: LTLRHTWSRSDSISCQQAHSSCS*MILEPR
Trigger: CCTGGGCTCCAAGATCATCAAGGAGCATGAGGAGTG...TGCCTGTTGACAGGAAATGGAATCTGATCGTGACCAAGTATGCCTCAGAGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp GCTCAGCTTTCTCTCATCCCAGAGGCTGTGGAAACAAAGACATCAGGGACCAAAAAGGAGCCGATAGTTTaGATGACGGCCTCCTGGAAC +
Preference number: 5 (lower is better)
Translates to: AQLSLIPEAVETKTSGTKKEPIV*MTASWN
Trigger: GTTCCAGGAGGCCGTCATCAAAACTATCGGCTCCTT...TTTGGTCCCTGATGTCTTTGTTTCCACAGCCTCTGGGATGAGAGAAAGCTGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp CCAGGGACCCTCAAGAAGTCTGGGGCTTCTTTTCAGGAAGTCAAGAGTCTTAAGGAAGGCAGCGGGACTTaGCTCATGATGAAGAGGATC +
Preference number: 5 (lower is better)
Translates to: PGTLKKSGASFQEVKSLKEGSGT*LMMKRI
Trigger: GATCCTCTTCATCATGAGCAAAGTCCCGCTGCCTTC...CTTAAGACTCTTGACTTCCTGAAAAGAAGCCCCAGACTTCTTGAGGGTCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp CCATGTGCCAGACTCCAGTCATTAAGAGTTCAGAAAGGGCAAGTGCTGGGCTCAGCCGACATCATGTTGTaGCACTGGAAACCTGTGGAT +
Preference number: 5 (lower is better)
Translates to: PCARLQSLRVQKGQVLGSADIML*HWKPVD
Trigger: ATCCACAGGTTTCCAGTGCAACAACATGATGTCGGC...TGAGCCCAGCACTTGCCCTTTCTGAACTCTTAATGACTGGAGTCTGGCACATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp TTCTTCTGTTCCCAGGGCAAGGTGAGAGACAGACATATCTGTGTGGGCCTGGAGGAGAATTTGTGGCGGTaGCCATGGCGATCAATGAAA +
Preference number: 5 (lower is better)
Translates to: FFCSQGKVRDRHICVGLEENLWR*PWRSMK
Trigger: TTTCATTGATCGCCATGGCAACCGCCACAAATTCTC...CTCCAGGCCCACACAGATATGTCTGTCTCTCACCTTGCCCTGGGAACAGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp TCCCTACTACACAGCCACGGCATGAAGAAAAAGAAATACTTAGACCGAGCAGCCTCCTGCCGGGAGCACTaGTCCACTTTCAACTTCAGG +
Preference number: 5 (lower is better)
Translates to: SLLHSHGMKKKKYLDRAASCREH*STFNFR
Trigger: CCTGAAGTTGAAAGTGGACAAGTGCTCCCGGCAGGA...GGCTGCTCGGTCTAAGTATTTCTTTTTCTTCATGCCGTGGCTGTGTAGTAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS CCA 90 bp TTCAGGACCGAGATGTCACCAAGGGTGCTGATGGTAGAGAATTTGTaGCGGTTGCCATGGCGATCAATGAAACTGATGAGGATCTCTAGG +
Preference number: 5 (lower is better)
Translates to: FRTEMSPRVLMVENL*RLPWRSMKLMRISR
Trigger: CCTAGAGATCCTCATCAGTTTCATTGATCGCCATGGCAACCGCCACAAATTCTCTACCATCAGCACCCTTGGTGACATCTCGGTCCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp CCAGGGACCCTCAAGAAGTCTGGGGCTTCTTTTCAGGAAGTCAAGAGTCTTAAGAACTTCACAAACGAGTaGGTGCCAAGGATCTGCAGG +
Preference number: 5 (lower is better)
Translates to: PGTLKKSGASFQEVKSLKNFTNE*VPRICR
Trigger: CCTGCAGATCCTTGGCACCAACTCGTTTGTGAAGTT...CTTAAGACTCTTGACTTCCTGAAAAGAAGCCCCAGACTTCTTGAGGGTCCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111178.2
CDS-3UTR CAA 90 bp GAGGCTTCCCAGGCCCTTCTGCTTCTCAATGGAGATGTCCTTGTGATTCTCTGTGTGTCCTCTTCAATGTaGGCGAACTTCACAAACGAG +
Preference number: 5 (lower is better)
Translates to: EASQALLLLNGDVLVILCVSSSM*ANFTNE
Trigger: CTCGTTTGTGAAGTTCGCCAACATTGAAGAGGACAC...ACAGAGAATCACAAGGACATCTCCATTGAGAAGCAGAAGGGCCTGGGAAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp TCCCTACTACACAGCCACGGCATGAAGAAAAAGAAATACTTAGACCGAGCAGCCGAAGGCAGCGGGACTTaGCTCATGATGAAGAGGATC +
Preference number: 5 (lower is better)
Translates to: SLLHSHGMKKKKYLDRAAEGSGT*LMMKRI
Trigger: GATCCTCTTCATCATGAGCAAAGTCCCGCTGCCTTC...GGCTGCTCGGTCTAAGTATTTCTTTTTCTTCATGCCGTGGCTGTGTAGTAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp TCCCTACTACACAGCCACGGCATGAAGAAAAAGAAATACTTAGACCGAGCAGCCAGGGCCGACATCATGTaGTTGCACTGGAAACCTGTG +
Preference number: 5 (lower is better)
Translates to: SLLHSHGMKKKKYLDRAARADIM*LHWKPV
Trigger: CACAGGTTTCCAGTGCAACAACATGATGTCGGCCCT...GGCTGCTCGGTCTAAGTATTTCTTTTTCTTCATGCCGTGGCTGTGTAGTAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp CCATGTGCCAGACTCCAGTCATTAAGAGTTCAGAAAGGGCAAGTGCTGGGCTCAGAGAATTTGTGGCGGTaGCCATGGCGATCAATGAAA +
Preference number: 5 (lower is better)
Translates to: PCARLQSLRVQKGQVLGSENLWR*PWRSMK
Trigger: TTTCATTGATCGCCATGGCAACCGCCACAAATTCTC...TGAGCCCAGCACTTGCCCTTTCTGAACTCTTAATGACTGGAGTCTGGCACATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp CCATGTGCCAGACTCCAGTCATTAAGAGTTCAGAAAGGGCAAGTGCTGGGCTCACCAATGCTCTTCCTCTaGGACAAGCGATCTTCATCT +
Preference number: 5 (lower is better)
Translates to: PCARLQSLRVQKGQVLGSPMLFL*DKRSSS
Trigger: AGATGAAGATCGCTTGTCCAAGAGGAAGAGCATTGG...TGAGCCCAGCACTTGCCCTTTCTGAACTCTTAATGACTGGAGTCTGGCACATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS CCA 90 bp GTTTTTCAGGCGCTGAGAGGGCATAGAAGGTCAGTTTCTCCATGTTaGTCTTCACCAGACCATCCTCAGGATCTTCAGGGAAGATATTGT +
Preference number: 5 (lower is better)
Translates to: VFQALRGHRRSVSPC*SSPDHPQDLQGRYC
Trigger: ACAATATCTTCCCTGAAGATCCTGAGGATGGTCTGGTGAAGACCAACATGGAGAAACTGACCTTCTATGCCCTCTCAGCGCCTGAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111178.2
CDS-3UTR CAA 90 bp TTCTTCTGTTCCCAGGGCAAGGTGAGAGACAGACATATCTGTGTGGGCCTGGAGATTTCAAAGATCTGGTaGAGTTTACTCTGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: FFCSQGKVRDRHICVGLEISKIW*SLLCSS
Trigger: ACTGCTGCAGAGTAAACTCAACCAGATCTTTGAAAT...CTCCAGGCCCACACAGATATGTCTGTCTCTCACCTTGCCCTGGGAACAGAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS-3UTR CAA 90 bp TGGGGGTGGGGTAGGGACTGCTTGGCCTTAATAGGTTTGTTGGCTCCTTTGGATATTTCAAAGATCTGGTaGAGTTTACTCTGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: WGWGRDCLALIGLLAPLDISKIW*SLLCSS
Trigger: ACTGCTGCAGAGTAAACTCAACCAGATCTTTGAAAT...ATCCAAAGGAGCCAACAAACCTATTAAGGCCAAGCAGTCCCTACCCCACCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS CCA 90 bp TTGATGCCTGACATGCGGATCTTAGTCTTGATTTCCAGGTCATCGTaGCTTGAGTGGCACATTTCACTGAATCGGGACACAAAGAAGTCA +
Preference number: 5 (lower is better)
Translates to: LMPDMRILVLISRSS*LEWHISLNRDTKKS
Trigger: TGACTTCTTTGTGTCCCGATTCAGTGAAATGTGCCACTCAAGCCACGATGACCTGGAAATCAAGACTAAGATCCGCATGTCAGGCATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS GCA 72 bp GGACTTCCACGATGCCGGCGCGCACAGTCGCCGCGCTaGGGCTGTTGGCGTCCAGGTGGCTCAGGAGCTGCT +
Preference number: 6 (lower is better)
Translates to: GLPRCRRAQSPR*GCWRPGGSGAA
Trigger: AGCAGCTCCTGAGCCACCTGGACGCCAACAGCCGCAGCGCGGCGACTGTGCGCGCCGGCATCGTGGAAGTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS CCA 72 bp CGCACAGTCGCCGCGCTGCGGCTGTTGGCGTCCAGGTaGCTCAGGAGCTGCTGGATAACCAGGTGGGAGTGC +
Preference number: 6 (lower is better)
Translates to: RTVAALRLLASR*LRSCWITRWEC
Trigger: GCACTCCCACCTGGTTATCCAGCAGCTCCTGAGCCACCTGGACGCCAACAGCCGCAGCGCGGCGACTGTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS TCA 72 bp GGATGGAGTGGTTTTGCGGCTGGCCGTAGGCTGCGCTaGTGGTTCCTGAAGGGCTTGGAGGGGGCCGGATGG +
Preference number: 6 (lower is better)
Translates to: GWSGFAAGRRLR*WFLKGLEGAGW
Trigger: CCATCCGGCCCCCTCCAAGCCCTTCAGGAACCATCAGCGCAGCCTACGGCCAGCCGCAAAACCACTCCATCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS CAA 72 bp AGGTGGATAAGAACGGGCTTGATGGCGTTCTTGATATaGCCGAAGGCCGCCCGGCCCAGGAGCTCCCTCAGG +
Preference number: 6 (lower is better)
Translates to: RWIRTGLMAFLI*PKAARPRSSLR
Trigger: CCTGAGGGAGCTCCTGGGCCGGGCGGCCTTCGGCAATATCAAGAACGCCATCAAGCCCGTTCTTATCCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS CCA 72 bp ACCGGCCCACAGCAGCATCTGAAGGCAAGGTCCTATTaGGATGGCGCCCCTGGGCTTTTCCACAAACACGTC +
Preference number: 6 (lower is better)
Translates to: TGPQQHLKARSY*DGAPGLFHKHV
Trigger: GACGTGTTTGTGGAAAAGCCCAGGGGCGCCATCCCAATAGGACCTTGCCTTCAGATGCTGCTGTGGGCCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000219331.2
CDS CAA 90 bp TGGTTATCCAGGTGGATAAGAACGGGCTTGATGGCGTTCTTGATATaGCCGAAGGCCGCCCGGCCCAGGAGCTCCCTCAGGCACCTCTCA +
Preference number: 6 (lower is better)
Translates to: WLSRWIRTGLMAFLI*PKAARPRSSLRHLS
Trigger: TGAGAGGTGCCTGAGGGAGCTCCTGGGCCGGGCGGCCTTCGGCAATATCAAGAACGCCATCAAGCCCGTTCTTATCCACCTGGATAACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS CAA 90 bp TCTGCGTCCTCCATGAGGGCAGTGGAGAGAAGGCGGTCCAGGAAGTaGCTGGGCAGGGCCGACATCATGTTGTTGCACTGGAAACCTGTG +
Preference number: 6 (lower is better)
Translates to: SASSMRAVERRRSRK*LGRADIMLLHWKPV
Trigger: CACAGGTTTCCAGTGCAACAACATGATGTCGGCCCTGCCCAGCAACTTCCTGGACCGCCTTCTCTCCACTGCCCTCATGGAGGACGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS CAA 90 bp AGCAGCGACGGGACGATCTTGTCCATGTGCTGTGGGTCCCAGATGTaGGCCTGCAGCTCGTCATTCACTGTCTTCCTCACTACCCCTTGC +
Preference number: 6 (lower is better)
Translates to: SSDGTILSMCCGSQM*ACSSSFTVFLTTPC
Trigger: GCAAGGGGTAGTGAGGAAGACAGTGAATGACGAGCTGCAGGCCAACATCTGGGACCCACAGCACATGGACAAGATCGTCCCGTCGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS CAA 90 bp GCCTCTTCCACGTGCTGCAGATTGAAAAGCAGCGACGGGACGATCTaGTCCATGTGCTGTGGGTCCCAGATGTTGGCCTGCAGCTCGTCA +
Preference number: 6 (lower is better)
Translates to: ASSTCCRLKSSDGTI*SMCCGSQMLACSSS
Trigger: TGACGAGCTGCAGGCCAACATCTGGGACCCACAGCACATGGACAAGATCGTCCCGTCGCTGCTTTTCAATCTGCAGCACGTGGAAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS TCA 72 bp TTCCTATTCTCCCCCGTCCGTCCGGTCTCTACGGGGTaGTGCACAGAAGGCAGCGGGACTTTGCTCATGATG +
Preference number: 6 (lower is better)
Translates to: FLFSPVRPVSTG*CTEGSGTLLMM
Trigger: CATCATGAGCAAAGTCCCGCTGCCTTCTGTGCATCACCCCGTAGAGACCGGACGGACGGGGGAGAATAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS CCA 72 bp GGGCTTGGAGGGGGCCGGATGGTGATTTCAAAGATCTaGTTGAGTTTACTCTGCAGCAGTGATGCCCGGGCC +
Preference number: 6 (lower is better)
Translates to: GLGGGRMVISKI*LSLLCSSDARA
Trigger: GGCCCGGGCATCACTGCTGCAGAGTAAACTCAACCAGATCTTTGAAATCACCATCCGGCCCCCTCCAAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS CCA 72 bp CCCACAGCAGCATCTGAAGGCAAGGTCCTATTGGGATaGCGCCCCTGGGCTTTTCCACAAACACGTCCTCAG +
Preference number: 6 (lower is better)
Translates to: PTAASEGKVLLG*RPWAFPQTRPQ
Trigger: CTGAGGACGTGTTTGTGGAAAAGCCCAGGGGCGCCATCCCAATAGGACCTTGCCTTCAGATGCTGCTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000219331.2
CDS CAA 72 bp TACCGGCCCACAGCAGCATCTGAAGGCAAGGTCCTATaGGGATGGCGCCCCTGGGCTTTTCCACAAACACGT +
Preference number: 6 (lower is better)
Translates to: YRPTAASEGKVL*GWRPWAFPQTR
Trigger: ACGTGTTTGTGGAAAAGCCCAGGGGCGCCATCCCAATAGGACCTTGCCTTCAGATGCTGCTGTGGGCCGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000219331.2
CDS TCA 72 bp CAGCGGGACTTTGCTCATGATGAAGAGGATCACCTCTaGGCGCTGGTAGGTCGGCAGTGTGCTGGCAAAGGA +
Preference number: 6 (lower is better)
Translates to: QRDFAHDEEDHL*ALVGRQCAGKG
Trigger: TCCTTTGCCAGCACACTGCCGACCTACCAGCGCTCAGAGGTGATCCTCTTCATCATGAGCAAAGTCCCGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS GCA 72 bp TTGGCGAACTTCACAAACGAGTTGGTGCCAAGGATCTaGAGGTTCGGCTTCTCCGACTCCAGCAGCTTGGCC +
Preference number: 6 (lower is better)
Translates to: LANFTNELVPRI*RFGFSDSSSLA
Trigger: GGCCAAGCTGCTGGAGTCGGAGAAGCCGAACCTGCAGATCCTTGGCACCAACTCGTTTGTGAAGTTCGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111178.2
CDS CCA 72 bp AGCGCCTCCATGGCAATACACACGTACCCATATCGATaGCGACCCACATCTCGGATGAGCCTCTCTGAGAGG +
Preference number: 6 (lower is better)
Translates to: SASMAIHTYPYR*RPTSRMSLSER
Trigger: CCTCTCAGAGAGGCTCATCCGAGATGTGGGTCGCCATCGATATGGGTACGTGTGTATTGCCATGGAGGCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111178.2
CDS CCA 72 bp GAAAAGCAGCGACGGGACGATCTTGTCCATGTGCTGTaGGTCCCAGATGTTGGCCTGCAGCTCGTCATTCAC +
Preference number: 6 (lower is better)
Translates to: EKQRRDDLVHVL*VPDVGLQLVIH
Trigger: GTGAATGACGAGCTGCAGGCCAACATCTGGGACCCACAGCACATGGACAAGATCGTCCCGTCGCTGCTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS CAA 72 bp ACGTGCTGCAGATTGAAAAGCAGCGACGGGACGATCTaGTCCATGTGCTGTGGGTCCCAGATGTTGGCCTGC +
Preference number: 6 (lower is better)
Translates to: TCCRLKSSDGTI*SMCCGSQMLAC
Trigger: GCAGGCCAACATCTGGGACCCACAGCACATGGACAAGATCGTCCCGTCGCTGCTTTTCAATCTGCAGCACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS CAA 72 bp CTTGGAGGGGGCCGGATGGTGATTTCAAAGATCTGGTaGAGTTTACTCTGCAGCAGTGATGCCCGGGCCCCA +
Preference number: 6 (lower is better)
Translates to: LGGGRMVISKIW*SLLCSSDARAP
Trigger: TGGGGCCCGGGCATCACTGCTGCAGAGTAAACTCAACCAGATCTTTGAAATCACCATCCGGCCCCCTCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS TCA 72 bp AACCTGTGGATACCTGAAGGAGGGACTTCAGCAACATaGTCTGGGTCAGCCGGTTCCTATTCTCCCCCGTCC +
Preference number: 6 (lower is better)
Translates to: NLWIPEGGTSAT*SGSAGSYSPPS
Trigger: GGACGGGGGAGAATAGGAACCGGCTGACCCAGATCATGTTGCTGAAGTCCCTCCTTCAGGTATCCACAGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS TCA 72 bp AGTTTACTCTGCAGCAGTGATGCCCGGGCCCCACAGTaGGCTGCAATTTCCTCAAAGGGCGCTTTCTGGAAC +
Preference number: 6 (lower is better)
Translates to: SLLCSSDARAPQ*AAISSKGAFWN
Trigger: GTTCCAGAAAGCGCCCTTTGAGGAAATTGCAGCTCACTGTGGGGCCCGGGCATCACTGCTGCAGAGTAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS GCA 72 bp AGATTGAAAAGCAGCGACGGGACGATCTTGTCCATGTaGTGTGGGTCCCAGATGTTGGCCTGCAGCTCGTCA +
Preference number: 6 (lower is better)
Translates to: RLKSSDGTILSM*CGSQMLACSSS
Trigger: TGACGAGCTGCAGGCCAACATCTGGGACCCACAGCACATGGACAAGATCGTCCCGTCGCTGCTTTTCAATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS GCA 72 bp CCAGGAAGTTGCTGGGCAGGGCCGACATCATGTTGTTaGACTGGAAACCTGTGGATACCTGAAGGAGGGACT +
Preference number: 6 (lower is better)
Translates to: PGSCWAGPTSCC*TGNLWIPEGGT
Trigger: AGTCCCTCCTTCAGGTATCCACAGGTTTCCAGTGCAACAACATGATGTCGGCCCTGCCCAGCAACTTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS CCA 72 bp GCATCTGAAGGCAAGGTCCTATTGGGATGGCGCCCCTaGGCTTTTCCACAAACACGTCCTCAGGAAGCATGT +
Preference number: 6 (lower is better)
Translates to: ASEGKVLLGWRP*AFPQTRPQEAC
Trigger: ACATGCTTCCTGAGGACGTGTTTGTGGAAAAGCCCAGGGGCGCCATCCCAATAGGACCTTGCCTTCAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000219331.2
CDS CAA 72 bp AGGATCTGCAGGTTCGGCTTCTCCGACTCCAGCAGCTaGGCCACCATTTTGAGGAAGCTTTCCACGAAGAGG +
Preference number: 6 (lower is better)
Translates to: RICRFGFSDSSS*ATILRKLSTKR
Trigger: CCTCTTCGTGGAAAGCTTCCTCAAAATGGTGGCCAAGCTGCTGGAGTCGGAGAAGCCGAACCTGCAGATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111178.2
CDS CAA 90 bp TGCTGGGAGTGCTTCTTCATGAAGACAGTGTCCTGCCGGGAGCACTaGTCCACTTTCAACTTCAGGACCGAGATGTCACCAAGGGTGCTG +
Preference number: 6 (lower is better)
Translates to: CWECFFMKTVSCREH*STFNFRTEMSPRVL
Trigger: CAGCACCCTTGGTGACATCTCGGTCCTGAAGTTGAAAGTGGACAAGTGCTCCCGGCAGGACACTGTCTTCATGAAGAAGCACTCCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS GCA 72 bp ATCTTGTCCATGTGCTGTGGGTCCCAGATGTTGGCCTaGAGCTCGTCATTCACTGTCTTCCTCACTACCCCT +
Preference number: 6 (lower is better)
Translates to: ILSMCCGSQMLA*SSSFTVFLTTP
Trigger: AGGGGTAGTGAGGAAGACAGTGAATGACGAGCTGCAGGCCAACATCTGGGACCCACAGCACATGGACAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS GCA 72 bp AGCTGCTGGGAGTGCTTCTTCATGAAGACAGTGTCCTaGCGGGAGCACTTGTCCACTTTCAACTTCAGGACC +
Preference number: 6 (lower is better)
Translates to: SCWECFFMKTVS*REHLSTFNFRT
Trigger: GGTCCTGAAGTTGAAAGTGGACAAGTGCTCCCGGCAGGACACTGTCTTCATGAAGAAGCACTCCCAGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS CAA 72 bp TTGGCCACCATTTTGAGGAAGCTTTCCACGAAGAGGTaGATACTCTGGCAGTGGCAGGCCATGAGCAGCTGG +
Preference number: 6 (lower is better)
Translates to: LATILRKLSTKR*ILWQWQAMSSW
Trigger: CCAGCTGCTCATGGCCTGCCACTGCCAGAGTATCAACCTCTTCGTGGAAAGCTTCCTCAAAATGGTGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111178.2
CDS CAA 90 bp TTGGTGCCAAGGATCTGCAGGTTCGGCTTCTCCGACTCCAGCAGCTaGGCCACCATTTTGAGGAAGCTTTCCACGAAGAGGTTGATACTC +
Preference number: 6 (lower is better)
Translates to: LVPRICRFGFSDSSS*ATILRKLSTKRLIL
Trigger: GAGTATCAACCTCTTCGTGGAAAGCTTCCTCAAAATGGTGGCCAAGCTGCTGGAGTCGGAGAAGCCGAACCTGCAGATCCTTGGCACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111178.2
CDS GCA 72 bp TGCAGCTCGTCATTCACTGTCTTCCTCACTACCCCTTaGAGGCCTTTGATGCCTGACATGCGGATCTTAGTC +
Preference number: 6 (lower is better)
Translates to: CSSSFTVFLTTP*RPLMPDMRILV
Trigger: GACTAAGATCCGCATGTCAGGCATCAAAGGCCTGCAAGGGGTAGTGAGGAAGACAGTGAATGACGAGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS CCA 72 bp GCGCTGAGAGGGCATAGAAGGTCAGTTTCTCCATGTTaGTCTTCACCAGACCATCCTCAGGATCTTCAGGGA +
Preference number: 6 (lower is better)
Translates to: ALRGHRRSVSPC*SSPDHPQDLQG
Trigger: TCCCTGAAGATCCTGAGGATGGTCTGGTGAAGACCAACATGGAGAAACTGACCTTCTATGCCCTCTCAGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111178.2
CDS CAA 90 bp TGCAGCTCGTCATTCACTGTCTTCCTCACTACCCCTTGCAGGCCTTaGATGCCTGACATGCGGATCTTAGTCTTGATTTCCAGGTCATCG +
Preference number: 6 (lower is better)
Translates to: CSSSFTVFLTTPCRP*MPDMRILVLISRSS
Trigger: CGATGACCTGGAAATCAAGACTAAGATCCGCATGTCAGGCATCAAAGGCCTGCAAGGGGTAGTGAGGAAGACAGTGAATGACGAGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS TCA 72 bp GATTTCAAAGATCTGGTTGAGTTTACTCTGCAGCAGTaGTGCCCGGGCCCCACAGTGAGCTGCAATTTCCTC +
Preference number: 6 (lower is better)
Translates to: DFKDLVEFTLQQ*CPGPTVSCNFL
Trigger: GAGGAAATTGCAGCTCACTGTGGGGCCCGGGCATCACTGCTGCAGAGTAAACTCAACCAGATCTTTGAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS GCA 72 bp CAGCTCAATGCTTATGAGGGCCAGCAGGCCATAGAGTaGCTCATAGTGTTTCTGGATGTTCGTCTCCTCCTT +
Preference number: 6 (lower is better)
Translates to: QLNAYEGQQAIE*LIVFLDVRLLL
Trigger: AAGGAGGAGACGAACATCCAGAAACACTATGAGGCACTCTATGGCCTGCTGGCCCTCATAAGCATTGAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS CCA 72 bp CTGGCAAAGGAGCCGATAGTTTTGATGACGGCCTCCTaGAACATGCACTCCTCATGCTCCTTGATGATCTTG +
Preference number: 6 (lower is better)
Translates to: LAKEPIVLMTAS*NMHSSCSLMIL
Trigger: CAAGATCATCAAGGAGCATGAGGAGTGCATGTTCCAGGAGGCCGTCATCAAAACTATCGGCTCCTTTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS CAA 72 bp TGCTTCTTCATGAAGACAGTGTCCTGCCGGGAGCACTaGTCCACTTTCAACTTCAGGACCGAGATGTCACCA +
Preference number: 6 (lower is better)
Translates to: CFFMKTVSCREH*STFNFRTEMSP
Trigger: TGGTGACATCTCGGTCCTGAAGTTGAAAGTGGACAAGTGCTCCCGGCAGGACACTGTCTTCATGAAGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS TCA 72 bp TGTCTTCCTCACTACCCCTTGCAGGCCTTTGATGCCTaGCATGCGGATCTTAGTCTTGATTTCCAGGTCATC +
Preference number: 6 (lower is better)
Translates to: CLPHYPLQAFDA*HADLSLDFQVI
Trigger: GATGACCTGGAAATCAAGACTAAGATCCGCATGTCAGGCATCAAAGGCCTGCAAGGGGTAGTGAGGAAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS CCA 72 bp AGCTTCGATGATAGGAGGGGGTGTCCTCTTCAATGTTaGCGAACTTCACAAACGAGTTGGTGCCAAGGATCT +
Preference number: 6 (lower is better)
Translates to: SFDDRRGCPLQC*RTSQTSWCQGS
Trigger: AGATCCTTGGCACCAACTCGTTTGTGAAGTTCGCCAACATTGAAGAGGACACCCCCTCCTATCATCGAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111178.2
CDS CAA 90 bp AACTTCAGGACCGAGATGTCACCAAGGGTGCTGATGGTAGAGAATTaGTGGCGGTTGCCATGGCGATCAATGAAACTGATGAGGATCTCT +
Preference number: 6 (lower is better)
Translates to: NFRTEMSPRVLMVEN*WRLPWRSMKLMRIS
Trigger: AGAGATCCTCATCAGTTTCATTGATCGCCATGGCAACCGCCACAAATTCTCTACCATCAGCACCCTTGGTGACATCTCGGTCCTGAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS TCA 72 bp CGGAAGAGAAACTCGATCACCACACCATCTAGATTCTaGGACAACCTGGGCTTTTCCACAAACACGTCCTCA +
Preference number: 6 (lower is better)
Translates to: RKRNSITTPSRF*DNLGFSTNTSS
Trigger: TGAGGACGTGTTTGTGGAAAAGCCCAGGTTGTCTCAGAATCTAGATGGTGTGGTGATCGAGTTTCTCTTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS CCA 72 bp GACATGCGGATCTTAGTCTTGATTTCCAGGTCATCGTaGCTTGAGTGGCACATTTCACTGAATCGGGACACA +
Preference number: 6 (lower is better)
Translates to: DMRILVLISRSS*LEWHISLNRDT
Trigger: TGTGTCCCGATTCAGTGAAATGTGCCACTCAAGCCACGATGACCTGGAAATCAAGACTAAGATCCGCATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS CAA 72 bp TCATTCACTGTCTTCCTCACTACCCCTTGCAGGCCTTaGATGCCTGACATGCGGATCTTAGTCTTGATTTCC +
Preference number: 6 (lower is better)
Translates to: SFTVFLTTPCRP*MPDMRILVLIS
Trigger: GGAAATCAAGACTAAGATCCGCATGTCAGGCATCAAAGGCCTGCAAGGGGTAGTGAGGAAGACAGTGAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS TCA 72 bp GCGGATCTTAGTCTTGATTTCCAGGTCATCGTGGCTTaGGTGGCACATTTCACTGAATCGGGACACAAAGAA +
Preference number: 6 (lower is better)
Translates to: ADLSLDFQVIVA*VAHFTESGHKE
Trigger: TTCTTTGTGTCCCGATTCAGTGAAATGTGCCACTCAAGCCACGATGACCTGGAAATCAAGACTAAGATCCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS GCA 72 bp CTTTTCCACAAACACGTCCTCAGGAAGCATGTATGGTaGCTCTTTCTTTCTGGTCTCTATCACCTCGTGGAT +
Preference number: 6 (lower is better)
Translates to: LFHKHVLRKHVW*LFLSGLYHLVD
Trigger: ATCCACGAGGTGATAGAGACCAGAAAGAAAGAGGCACCATACATGCTTCCTGAGGACGTGTTTGTGGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000219331.2
CDS GCA 72 bp CTTTTCCACAAACACGTCCTCAGGAAGCATGTATGGTaGCTCTTTCTTTCTGGTCTCTATCACCTGAACAGC +
Preference number: 6 (lower is better)
Translates to: LFHKHVLRKHVW*LFLSGLYHLNS
Trigger: GCTGTTCAGGTGATAGAGACCAGAAAGAAAGAGGCACCATACATGCTTCCTGAGGACGTGTTTGTGGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218166.2
CDS TCA 72 bp TTTCCAGGTCATCGTGGCTTGAGTGGCACATTTCACTaGATCGGGACACAAAGAAGTCATAGCTTCGATGAT +
Preference number: 6 (lower is better)
Translates to: FPGHRGLSGTFH*IGTQRSHSFDD
Trigger: ATCATCGAAGCTATGACTTCTTTGTGTCCCGATTCAGTGAAATGTGCCACTCAAGCCACGATGACCTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2
CDS CAA 72 bp TACATGATGATTTTAAAGCAACGGGTGGCAAACACTTaGGGTTCCCAAAGAGAGTGGTTATCCAGGTGGATA +
Preference number: 6 (lower is better)
Translates to: YMMILKQRVANT*GSQREWLSRWI
Trigger: TATCCACCTGGATAACCACTCTCTTTGGGAACCCAAAGTGTTTGCCACCCGTTGCTTTAAAATCATCATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111178.2
ENSMUST00000218166.2