Pregenerated sensors for EFNB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001300Ensembl transcript IDs: ENSMUST00000001319.15, ENSMUST00000152698.2
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATAGCCTACCGTGTCCTCCCCGGGCTCTGCAGAGGCCTGAGTGGCTaGGTGCATGGCTTGGAGGTCCGCGTGGGGCCGCGGCAGTCCAAG | + |
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Preference number: 1 (lower is better) Translates to: IAYRVLPGLCRGLSG*VHGLEVRVGPRQSK Trigger: CTTGGACTGCCGCGGCCCCACGCGGACCTCCAAGCCATGCACCCAGCCACTCAGGCCTCTGCAGAGCCCGGGGAGGACACGGTAGGCTAT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR CCA 90 bp | TGGGTGCATGGCTTGGAGGTCCGCGTGGGGCCGCGGCAGTCCAAGTaGGGATCTCCTAGCAGTCTTCCAGCTTCCGGGGAGGGTCTGTGG | + |
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Preference number: 1 (lower is better) Translates to: WVHGLEVRVGPRQSK*GSPSSLPASGEGLW Trigger: CCACAGACCCTCCCCGGAAGCTGGAAGACTGCTAGGAGATCCCCACTTGGACTGCCGCGGCCCCACGCGGACCTCCAAGCCATGCACCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR GCA 90 bp | CAGGAGGCATCCTGCCCCCACAGCCAGGCTCAGGCAGTCCCTGCGTaGCCAAGAACAAGGTGCGAGTTCCCTTGGGAGGCGCAGGTCTCA | + |
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Preference number: 1 (lower is better) Translates to: QEASCPHSQAQAVPA*PRTRCEFPWEAQVS Trigger: TGAGACCTGCGCCTCCCAAGGGAACTCGCACCTTGTTCTTGGGCACGCAGGGACTGCCTGAGCCTGGCTGTGGGGGCAGGATGCCTCCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR GCA 90 bp | TTGACCTGCCGTGGCAGCCAGCACCTCCTCACTCCTCCACACATCTaGGCTTCCCGGCTGACCCGGCCTCCAGGCAAGCAGGGTTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: LTCRGSQHLLTPPHI*ASRLTRPPGKQGSS Trigger: AGAAGAACCCTGCTTGCCTGGAGGCCGGGTCAGCCGGGAAGCGCAGATGTGTGGAGGAGTGAGGAGGTGCTGGCTGCCACGGCAGGTCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR CCA 90 bp | CCCAGCACTTCACCGGAGGCCTGCCCTCTCCCTCTGTGCTCTAGCTaGTCCTTTCACAACAATGGCCCCTTTGTTCCCCGCAGGAGAGGG | + |
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Preference number: 1 (lower is better) Translates to: PSTSPEACPLPLCSS*SFHNNGPFVPRRRG Trigger: CCCTCTCCTGCGGGGAACAAAGGGGCCATTGTTGTGAAAGGACCAGCTAGAGCACAGAGGGAGAGGGCAGGCCTCCGGTGAAGTGCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR TCA 90 bp | TTCCATCTCAAGGACTCTAAGAGGTGGGCCATGTGTGCTTTGCTTTaGCATGGAGCCCGGGTACTGCCTTGGAGCCCGGACAGCACGGCC | + |
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Preference number: 1 (lower is better) Translates to: FHLKDSKRWAMCALL*HGARVLPWSPDSTA Trigger: GGCCGTGCTGTCCGGGCTCCAAGGCAGTACCCGGGCTCCATGTCAAAGCAAAGCACACATGGCCCACCTCTTAGAGTCCTTGAGATGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR GCA 90 bp | CACAGCTCTGCGCTGCGCTTTTTATTTCCAGTACCTCTGCAGTTCTaGCCCAGCACTTCACCGGAGGCCTGCCCTCTCCCTCTGTGCTCT | + |
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Preference number: 1 (lower is better) Translates to: HSSALRFLFPVPLQF*PSTSPEACPLPLCS Trigger: AGAGCACAGAGGGAGAGGGCAGGCCTCCGGTGAAGTGCTGGGGCAGAACTGCAGAGGTACTGGAAATAAAAAGCGCAGCGCAGAGCTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR GCA 90 bp | CTTACTTCCATCTCAAGGACTCTAAGAGGTGGGCCATGTGTGCTTTaGTTTGACATGGAGCCCGGGTACTGCCTTGGAGCCCGGACAGCA | + |
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Preference number: 1 (lower is better) Translates to: LTSISRTLRGGPCVL*FDMEPGYCLGARTA Trigger: TGCTGTCCGGGCTCCAAGGCAGTACCCGGGCTCCATGTCAAAGCAAAGCACACATGGCCCACCTCTTAGAGTCCTTGAGATGGAAGTAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR GCA 90 bp | GTCTCTGTCCTCTCAGAAAAACCAAAGCATTATCTATTTCCTTCCTaGATCCCTACTATGCTCCAGGGGCAGCAAGCAGCCTTGACCTGC | + |
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Preference number: 1 (lower is better) Translates to: VSVLSEKPKHYLFPS*IPTMLQGQQAALTC Trigger: GCAGGTCAAGGCTGCTTGCTGCCCCTGGAGCATAGTAGGGATGCAGGAAGGAAATAGATAATGCTTTGGTTTTTCTGAGAGGACAGAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR GCA 90 bp | TACGGTTCTGCGAGATTCCCGCAGGACCGTGTTATTTTTGCCATTTaGTCTCATTATGGATACTTTTCTTGCTATTGGTACGTTTCGGGG | + |
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Preference number: 1 (lower is better) Translates to: YGSARFPQDRVIFAI*SHYGYFSCYWYVSG Trigger: CCCCGAAACGTACCAATAGCAAGAAAAGTATCCATAATGAGAGCAAATGGCAAAAATAACACGGTCCTGCGGGAATCTCGCAGAACCGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR GCA 90 bp | CCTAGTCTACGGTTCTGCGAGATTCCCGCAGGACCGTGTTATTTTTaGCATTTGCTCTCATTATGGATACTTTTCTTGCTATTGGTACGT | + |
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Preference number: 1 (lower is better) Translates to: PSLRFCEIPAGPCYF*HLLSLWILFLLLVR Trigger: ACGTACCAATAGCAAGAAAAGTATCCATAATGAGAGCAAATGGCAAAAATAACACGGTCCTGCGGGAATCTCGCAGAACCGTAGACTAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR CCA 90 bp | ATTTTCTGCACCAGACACAAAACAGACGCACAGGACACTTCTCAATaGGTTGCAGGTAACTCAACTCTTCATCAATTCATCCGATTCTTC | + |
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Preference number: 1 (lower is better) Translates to: IFCTRHKTDAQDTSQ*VAGNSTLHQFIRFF Trigger: GAAGAATCGGATGAATTGATGAAGAGTTGAGTTACCTGCAACCCATTGAGAAGTGTCCTGTGCGTCTGTTTTGTGTCTGGTGCAGAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR TCA 90 bp | ACTCATACACACACACACACATCGAACCAACATCATTTTCAGGTTTaGGAAGTAGGGAATAATCTCTGTGACAACTCATTTTTGCAGGTA | + |
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Preference number: 1 (lower is better) Translates to: THTHTHTSNQHHFQV*EVGNNLCDNSFLQV Trigger: TACCTGCAAAAATGAGTTGTCACAGAGATTATTCCCTACTTCTCAAACCTGAAAATGATGTTGGTTCGATGTGTGTGTGTGTGTATGAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR TCA 90 bp | ATAATCTCTGTGACAACTCATTTTTGCAGGTACTCACTGGAGGTCTaGGAACCTTCAAATGCTGTCATTACAATTTTTATTTCCTCCCAA | + |
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Preference number: 1 (lower is better) Translates to: IISVTTHFCRYSLEV*EPSNAVITIFISSQ Trigger: TTGGGAGGAAATAAAAATTGTAATGACAGCATTTGAAGGTTCTCAGACCTCCAGTGAGTACCTGCAAAAATGAGTTGTCACAGAGATTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR-3UTR GCA 90 bp | GCTGCGCCATCCATAGCCTACCGTGTCCTCCCCGGGCTCTGCAGAGGCCTGAGTTTCCAGGAGGCATCCTaGCCCCACAGCCAGGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: AAPSIAYRVLPGLCRGLSFQEAS*PHSQAQ Trigger: CTGAGCCTGGCTGTGGGGGCAGGATGCCTCCTGGAA...ACTCAGGCCTCTGCAGAGCCCGGGGAGGACACGGTAGGCTATGGATGGCGCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR-3UTR CCA 90 bp | TGTGTGGTAGTGAAAGGCTCCCCACCACTCACCAGTCAGTCACCTCCCACCTGTAGCCTTGACCTGCCGTaGCAGCCAGCACCTCCTCAC | + |
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Preference number: 2 (lower is better) Translates to: CVVVKGSPPLTSQSPPTCSLDLP*QPAPPH Trigger: GTGAGGAGGTGCTGGCTGCCACGGCAGGTCAAGGCT...ACAGGTGGGAGGTGACTGACTGGTGAGTGGTGGGGAGCCTTTCACTACCACACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR-3UTR GCA 90 bp | TGTGTGGTAGTGAAAGGCTCCCCACCACTCACCAGTCAGTCACCTCCCACCTGTGGCTCAGGCAGTCCCTaGGTGCCCAAGAACAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: CVVVKGSPPLTSQSPPTCGSGSP*VPKNKV Trigger: CACCTTGTTCTTGGGCACGCAGGGACTGCCTGAGCC...ACAGGTGGGAGGTGACTGACTGGTGAGTGGTGGGGAGCCTTTCACTACCACACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR-3UTR CCA 90 bp | CGGGTACTGCCTTGGAGCCCGGACAGCACGGCCATAAACCAAAAACCAACGTGTGGGAAGGGGCACTTATaGGGCCTGGGGAATCTGACC | + |
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Preference number: 2 (lower is better) Translates to: RVLPWSPDSTAINQKPTCGKGHL*GLGNLT Trigger: GGTCAGATTCCCCAGGCCCCATAAGTGCCCCTTCCC...ACACGTTGGTTTTTGGTTTATGGCCGTGCTGTCCGGGCTCCAAGGCAGTACCCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR-3UTR GCA 90 bp | GCGTCTTCACTTAAAACACGATGGTGCAAGCTCCGAAGTCAGGTGACTAGGGATGTCCTCCCCGGGCTCTaGAGAGGCCTGAGTGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: ASSLKTRWCKLRSQVTRDVLPGL*RGLSGW Trigger: CCAGCCACTCAGGCCTCTGCAGAGCCCGGGGAGGAC...ATCCCTAGTCACCTGACTTCGGAGCTTGCACCATCGTGTTTTAAGTGAAGACGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR-3UTR TCA 90 bp | ACGGTTCTGCGAGATTCCCGCAGGACCGTGTTATTTTTGCCATTTGCTCTCATTGGCAGCAAGCAGCCTTaGCCTGCCGTGGCAGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: TVLRDSRRTVLFLPFALIGSKQP*PAVAAS Trigger: GCTGGCTGCCACGGCAGGTCAAGGCTGCTTGCTGCC...AATGAGAGCAAATGGCAAAAATAACACGGTCCTGCGGGAATCTCGCAGAACCGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR-3UTR GCA 90 bp | CGGGTACTGCCTTGGAGCCCGGACAGCACGGCCATAAACCAAAAACCAACGTGTGTGATAAGTCCAGTGTaGACGGCAGGAAACGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: RVLPWSPDSTAINQKPTCVISPV*TAGNVE Trigger: CTCCACGTTTCCTGCCGTGCACACTGGACTTATCAC...ACACGTTGGTTTTTGGTTTATGGCCGTGCTGTCCGGGCTCCAAGGCAGTACCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR-3UTR CCA 90 bp | TGTGTGGTAGTGAAAGGCTCCCCACCACTCACCAGTCAGTCACCTCCCACCTGTTCTTGGTGTAAAGGGTaGAGCTGGGACTCTGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: CVVVKGSPPLTSQSPPTCSWCKG*SWDSVV Trigger: CACCACAGAGTCCCAGCTCCACCCTTTACACCAAGA...ACAGGTGGGAGGTGACTGACTGGTGAGTGGTGGGGAGCCTTTCACTACCACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR-3UTR GCA 90 bp | GCGTCTTCACTTAAAACACGATGGTGCAAGCTCCGAAGTCAGGTGACTAGGGATTGCCCAAGAACAAGGTaGGAGTTCCCTTGGGAGGCG | + |
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Preference number: 2 (lower is better) Translates to: ASSLKTRWCKLRSQVTRDCPRTR*EFPWEA Trigger: CGCCTCCCAAGGGAACTCGCACCTTGTTCTTGGGCA...ATCCCTAGTCACCTGACTTCGGAGCTTGCACCATCGTGTTTTAAGTGAAGACGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR-3UTR GCA 90 bp | CTTTCACTTTTTAAAGCACTAAGCGCTGGGGTCACTTTAATCACCACCACCACGACTTCACCGGAGGCCTaGCCTCTCCCTCTGTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: LSLFKALSAGVTLITTTTTSPEA*PLPLCS Trigger: AGAGCACAGAGGGAGAGGGCAGGCCTCCGGTGAAGT...CGTGGTGGTGGTGATTAAAGTGACCCCAGCGCTTAGTGCTTTAAAAAGTGAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR-3UTR CCA 90 bp | CTTTCACTTTTTAAAGCACTAAGCGCTGGGGTCACTTTAATCACCACCACCACGAGAGGCCTGAGTGGCTaGGTGCATGGCTTGGAGGTC | + |
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Preference number: 2 (lower is better) Translates to: LSLFKALSAGVTLITTTTRGLSG*VHGLEV Trigger: GACCTCCAAGCCATGCACCCAGCCACTCAGGCCTCT...CGTGGTGGTGGTGATTAAAGTGACCCCAGCGCTTAGTGCTTTAAAAAGTGAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR-3UTR CCA 90 bp | CTTTCACTTTTTAAAGCACTAAGCGCTGGGGTCACTTTAATCACCACCACCACGCTGCAGAGGCCTGAGTaGCTGGGTGCATGGCTTGGA | + |
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Preference number: 2 (lower is better) Translates to: LSLFKALSAGVTLITTTTLQRPE*LGAWLG Trigger: TCCAAGCCATGCACCCAGCCACTCAGGCCTCTGCAG...CGTGGTGGTGGTGATTAAAGTGACCCCAGCGCTTAGTGCTTTAAAAAGTGAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR-3UTR GCA 90 bp | ACGGTTCTGCGAGATTCCCGCAGGACCGTGTTATTTTTGCCATTTGCTCTCATTTGCCCTCTCCCTCTGTaGTCTAGCTGGTCCTTTCAC | + |
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Preference number: 2 (lower is better) Translates to: TVLRDSRRTVLFLPFALICPLPL*SSWSFH Trigger: GTGAAAGGACCAGCTAGAGCACAGAGGGAGAGGGCA...AATGAGAGCAAATGGCAAAAATAACACGGTCCTGCGGGAATCTCGCAGAACCGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR-3UTR TCA 90 bp | CGGGTACTGCCTTGGAGCCCGGACAGCACGGCCATAAACCAAAAACCAACGTGTAATACCCATCTAATTTaGTCTTGGTGTAAAGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: RVLPWSPDSTAINQKPTCNTHLI*SWCKGW Trigger: CCACCCTTTACACCAAGATCAAATTAGATGGGTATT...ACACGTTGGTTTTTGGTTTATGGCCGTGCTGTCCGGGCTCCAAGGCAGTACCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR-3UTR GCA 90 bp | CTTTCACTTTTTAAAGCACTAAGCGCTGGGGTCACTTTAATCACCACCACCACGCTCCTAAGATGCTGCTaGGCCATCCATAGCCTACCG | + |
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Preference number: 2 (lower is better) Translates to: LSLFKALSAGVTLITTTTLLRCC*AIHSLP Trigger: CGGTAGGCTATGGATGGCGCAGCAGCATCTTAGGAG...CGTGGTGGTGGTGATTAAAGTGACCCCAGCGCTTAGTGCTTTAAAAAGTGAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR-3UTR GCA 90 bp | GATTGTCATTTTCTGCACCAGACACAAAACAGACGCACAGGACACTTCTCAATGGTACCTCTGCAGTTCTaGCCCAGCACTTCACCGGAG | + |
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Preference number: 2 (lower is better) Translates to: DCHFLHQTQNRRTGHFSMVPLQF*PSTSPE Trigger: CTCCGGTGAAGTGCTGGGGCAGAACTGCAGAGGTAC...CATTGAGAAGTGTCCTGTGCGTCTGTTTTGTGTCTGGTGCAGAAAATGACAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR-3UTR CCA 90 bp | CCCACCTGTCTCTGTCCTCTCAGAAAAACCAAAGCATTATCTATTTCCTTCCTGCCGCGGCAGTCCAAGTaGGGATCTCCTAGCAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: PTCLCPLRKTKALSISFLPRQSK*GSPSSL Trigger: AAGACTGCTAGGAGATCCCCACTTGGACTGCCGCGG...CAGGAAGGAAATAGATAATGCTTTGGTTTTTCTGAGAGGACAGAGACAGGTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR-3UTR CCA 90 bp | CTGCGAGATTCCCGCAGGACCGTGTTATTTTTGCCATTTGCTCTCATTATGGATCCTCTGTGCTCTAGCTaGTCCTTTCACAACAATGGC | + |
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Preference number: 2 (lower is better) Translates to: LRDSRRTVLFLPFALIMDPLCSS*SFHNNG Trigger: GCCATTGTTGTGAAAGGACCAGCTAGAGCACAGAGG...ATCCATAATGAGAGCAAATGGCAAAAATAACACGGTCCTGCGGGAATCTCGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR-3UTR GCA 90 bp | GATTGTCATTTTCTGCACCAGACACAAAACAGACGCACAGGACACTTCTCAATGACTCTCCCACAGCTCTaGGCTGCGCTTTTTATTTCC | + |
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Preference number: 2 (lower is better) Translates to: DCHFLHQTQNRRTGHFSMTLPQL*AALFIS Trigger: GGAAATAAAAAGCGCAGCGCAGAGCTGTGGGAGAGT...CATTGAGAAGTGTCCTGTGCGTCTGTTTTGTGTCTGGTGCAGAAAATGACAATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR CAA 90 bp | CTACGGTTCTGCGAGATTCCCGCAGGACCGTGTTATTTTTGCCATTaGCTCTCATTATGGATACTTTTCTTGCTATTGGTACGTTTCGGG | + |
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Preference number: 2 (lower is better) Translates to: LRFCEIPAGPCYFCH*LSLWILFLLLVRFG Trigger: CCCGAAACGTACCAATAGCAAGAAAAGTATCCATAATGAGAGCAAATGGCAAAAATAACACGGTCCTGCGGGAATCTCGCAGAACCGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR CAA 90 bp | TCTGCACCAGACACAAAACAGACGCACAGGACACTTCTCAATGGGTaGCAGGTAACTCAACTCTTCATCAATTCATCCGATTCTTCACAG | + |
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Preference number: 2 (lower is better) Translates to: SAPDTKQTHRTLLNG*QVTQLFINSSDSSQ Trigger: CTGTGAAGAATCGGATGAATTGATGAAGAGTTGAGTTACCTGCAACCCATTGAGAAGTGTCCTGTGCGTCTGTTTTGTGTCTGGTGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR-3UTR CCA 90 bp | CTTTCACTTTTTAAAGCACTAAGCGCTGGGGTCACTTTAATCACCACCACCACGCTTCTAGGTCAGATTTaGCTCTCTGCTCTTCTCCTA | + |
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Preference number: 2 (lower is better) Translates to: LSLFKALSAGVTLITTTTLLGQI*LSALLL Trigger: TAGGAGAAGAGCAGAGAGCCAAATCTGACCTAGAAG...CGTGGTGGTGGTGATTAAAGTGACCCCAGCGCTTAGTGCTTTAAAAAGTGAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR-3UTR TCA 90 bp | GATTGTCATTTTCTGCACCAGACACAAAACAGACGCACAGGACACTTCTCAATGGACTTACAGCCTGTTTaGCCTTTGGCTTTTCAACTT | + |
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Preference number: 2 (lower is better) Translates to: DCHFLHQTQNRRTGHFSMDLQPV*PLAFQL Trigger: AAGTTGAAAAGCCAAAGGTCAAACAGGCTGTAAGTC...CATTGAGAAGTGTCCTGTGCGTCTGTTTTGTGTCTGGTGCAGAAAATGACAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR-3UTR TCA 90 bp | GATTGTCATTTTCTGCACCAGACACAAAACAGACGCACAGGACACTTCTCAATGAACGTAGCCAACCGATaGCACAGACATTTGATTTCA | + |
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Preference number: 2 (lower is better) Translates to: DCHFLHQTQNRRTGHFSMNVANR*HRHLIS Trigger: TGAAATCAAATGTCTGTGTCATCGGTTGGCTACGTT...CATTGAGAAGTGTCCTGTGCGTCTGTTTTGTGTCTGGTGCAGAAAATGACAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR GCA 72 bp | TCCTGCCCCCACAGCCAGGCTCAGGCAGTCCCTGCGTaGCCAAGAACAAGGTGCGAGTTCCCTTGGGAGGCG | + |
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Preference number: 3 (lower is better) Translates to: SCPHSQAQAVPA*PRTRCEFPWEA Trigger: CGCCTCCCAAGGGAACTCGCACCTTGTTCTTGGGCACGCAGGGACTGCCTGAGCCTGGCTGTGGGGGCAGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR GCA 72 bp | GCGCCATCCATAGCCTACCGTGTCCTCCCCGGGCTCTaGAGAGGCCTGAGTGGCTGGGTGCATGGCTTGGAG | + |
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Preference number: 3 (lower is better) Translates to: APSIAYRVLPGL*RGLSGWVHGLE Trigger: CTCCAAGCCATGCACCCAGCCACTCAGGCCTCTGCAGAGCCCGGGGAGGACACGGTAGGCTATGGATGGCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR-3UTR CAA 90 bp | GCTGCGCCATCCATAGCCTACCGTGTCCTCCCCGGGCTCTGCAGAGGCCTGAGTAAGGTGCGAGTTCCCTaGGGAGGCGCAGGTCTCAGG | + |
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Preference number: 3 (lower is better) Translates to: AAPSIAYRVLPGLCRGLSKVRVP*GGAGLR Trigger: CCTGAGACCTGCGCCTCCCAAGGGAACTCGCACCTT...ACTCAGGCCTCTGCAGAGCCCGGGGAGGACACGGTAGGCTATGGATGGCGCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR GCA 72 bp | GCCGGCCTGGTGCGCAACCTTCTCCTAAGATGCTGCTaGGCCATCCATAGCCTACCGTGTCCTCCCCGGGCT | + |
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Preference number: 3 (lower is better) Translates to: AGLVRNLLLRCC*AIHSLPCPPRA Trigger: AGCCCGGGGAGGACACGGTAGGCTATGGATGGCGCAGCAGCATCTTAGGAGAAGGTTGCGCACCAGGCCGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR TCA 72 bp | GCATCCCTACTATGCTCCAGGGGCAGCAAGCAGCCTTaGCCTGCCGTGGCAGCCAGCACCTCCTCACTCCTC | + |
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Preference number: 3 (lower is better) Translates to: ASLLCSRGSKQP*PAVAASTSSLL Trigger: GAGGAGTGAGGAGGTGCTGGCTGCCACGGCAGGTCAAGGCTGCTTGCTGCCCCTGGAGCATAGTAGGGATGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR GCA 72 bp | CCTACTATGCTCCAGGGGCAGCAAGCAGCCTTGACCTaGCGTGGCAGCCAGCACCTCCTCACTCCTCCACAC | + |
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Preference number: 3 (lower is better) Translates to: PTMLQGQQAALT*RGSQHLLTPPH Trigger: GTGTGGAGGAGTGAGGAGGTGCTGGCTGCCACGGCAGGTCAAGGCTGCTTGCTGCCCCTGGAGCATAGTAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR TCA 72 bp | ACCTCCTCACTCCTCCACACATCTGCGCTTCCCGGCTaGCCCGGCCTCCAGGCAAGCAGGGTTCTTCTGTAC | + |
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Preference number: 3 (lower is better) Translates to: TSSLLHTSALPG*PGLQASRVLLY Trigger: GTACAGAAGAACCCTGCTTGCCTGGAGGCCGGGTCAGCCGGGAAGCGCAGATGTGTGGAGGAGTGAGGAGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR GCA 72 bp | CCTCTGCAGTTCTGCCCCAGCACTTCACCGGAGGCCTaGCCTCTCCCTCTGTGCTCTAGCTGGTCCTTTCAC | + |
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Preference number: 3 (lower is better) Translates to: PLQFCPSTSPEA*PLPLCSSWSFH Trigger: GTGAAAGGACCAGCTAGAGCACAGAGGGAGAGGGCAGGCCTCCGGTGAAGTGCTGGGGCAGAACTGCAGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR GCA 72 bp | CTTACTGAACCCGAGGTCCAAGTGATAAGTCCAGTGTaGACGGCAGGAAACGTGGAGGCAGGGGCCGGCCTG | + |
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Preference number: 3 (lower is better) Translates to: LTEPEVQVISPV*TAGNVEAGAGL Trigger: CAGGCCGGCCCCTGCCTCCACGTTTCCTGCCGTGCACACTGGACTTATCACTTGGACCTCGGGTTCAGTAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| 3UTR CCA 72 bp | TCACCGGAGGCCTGCCCTCTCCCTCTGTGCTCTAGCTaGTCCTTTCACAACAATGGCCCCTTTGTTCCCCGC | + |
|
Preference number: 3 (lower is better) Translates to: SPEACPLPLCSS*SFHNNGPFVPR Trigger: GCGGGGAACAAAGGGGCCATTGTTGTGAAAGGACCAGCTAGAGCACAGAGGGAGAGGGCAGGCCTCCGGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| 3UTR GCA 72 bp | CCCAGCACTTCACCGGAGGCCTGCCCTCTCCCTCTGTaGTCTAGCTGGTCCTTTCACAACAATGGCCCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: PSTSPEACPLPL*SSWSFHNNGPF Trigger: AAAGGGGCCATTGTTGTGAAAGGACCAGCTAGAGCACAGAGGGAGAGGGCAGGCCTCCGGTGAAGTGCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| 3UTR GCA 72 bp | GCGCTGCGCTTTTTATTTCCAGTACCTCTGCAGTTCTaGCCCAGCACTTCACCGGAGGCCTGCCCTCTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: ALRFLFPVPLQF*PSTSPEACPLP Trigger: AGGGAGAGGGCAGGCCTCCGGTGAAGTGCTGGGGCAGAACTGCAGAGGTACTGGAAATAAAAAGCGCAGCGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| 3UTR TCA 72 bp | AAGGACTCTAAGAGGTGGGCCATGTGTGCTTTGCTTTaGCATGGAGCCCGGGTACTGCCTTGGAGCCCGGAC | + |
|
Preference number: 3 (lower is better) Translates to: KDSKRWAMCALL*HGARVLPWSPD Trigger: GTCCGGGCTCCAAGGCAGTACCCGGGCTCCATGTCAAAGCAAAGCACACATGGCCCACCTCTTAGAGTCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| 3UTR GCA 72 bp | CTCCCAAAGCAGACGGACTCTCCCACAGCTCTGCGCTaGGCTTTTTATTTCCAGTACCTCTGCAGTTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: LPKQTDSPTALR*AFYFQYLCSSA Trigger: GGCAGAACTGCAGAGGTACTGGAAATAAAAAGCGCAGCGCAGAGCTGTGGGAGAGTCCGTCTGCTTTGGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| 3UTR-3UTR CAA 90 bp | GATTGTCATTTTCTGCACCAGACACAAAACAGACGCACAGGACACTTCTCAATGGGGCAGCAAGCAGCCTaGACCTGCCGTGGCAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: DCHFLHQTQNRRTGHFSMGQQAA*TCRGSQ Trigger: CTGGCTGCCACGGCAGGTCAAGGCTGCTTGCTGCCC...CATTGAGAAGTGTCCTGTGCGTCTGTTTTGTGTCTGGTGCAGAAAATGACAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| 3UTR TCA 72 bp | GATCTTGGTGTAAAGGGTGGAGCTGGGACTCTGTGGTaGGTGTCCCGTAATGATGCAGTACGTGGAGTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: DLGVKGGAGTLW*VSRNDAVRGVR Trigger: CCTCACTCCACGTACTGCATCATTACGGGACACTCACCACAGAGTCCCAGCTCCACCCTTTACACCAAGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| 3UTR-3UTR CAA 90 bp | CTTTCACTTTTTAAAGCACTAAGCGCTGGGGTCACTTTAATCACCACCACCACGAGGGGTCTAGGGAGTTaGCTGCAGAGCCCTGGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LSLFKALSAGVTLITTTTRGLGS*LQSPGK Trigger: CTTGCCAGGGCTCTGCAGCAAACTCCCTAGACCCCT...CGTGGTGGTGGTGATTAAAGTGACCCCAGCGCTTAGTGCTTTAAAAAGTGAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| 3UTR-3UTR CAA 90 bp | CTGCGAGATTCCCGCAGGACCGTGTTATTTTTGCCATTTGCTCTCATTATGGATCATGTGTGCTTTGCTTaGACATGGAGCCCGGGTACT | + |
|
Preference number: 3 (lower is better) Translates to: LRDSRRTVLFLPFALIMDHVCFA*TWSPGT Trigger: AGTACCCGGGCTCCATGTCAAAGCAAAGCACACATG...ATCCATAATGAGAGCAAATGGCAAAAATAACACGGTCCTGCGGGAATCTCGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| 3UTR-3UTR CAA 90 bp | GCGTCTTCACTTAAAACACGATGGTGCAAGCTCCGAAGTCAGGTGACTAGGGATGCTTACAAGAAACTCTaGTGTGAATGCGCAGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: ASSLKTRWCKLRSQVTRDAYKKL*CECAGE Trigger: CTCTCCTGCGCATTCACACAAGAGTTTCTTGTAAGC...ATCCCTAGTCACCTGACTTCGGAGCTTGCACCATCGTGTTTTAAGTGAAGACGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| 3UTR-3UTR CAA 90 bp | GCGTCTTCACTTAAAACACGATGGTGCAAGCTCCGAAGTCAGGTGACTAGGGATCAAATAAGGGGACAGTaGGTAGATTGTCATTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: ASSLKTRWCKLRSQVTRDQIRGQ*VDCHFL Trigger: CAGAAAATGACAATCTACCAACTGTCCCCTTATTTG...ATCCCTAGTCACCTGACTTCGGAGCTTGCACCATCGTGTTTTAAGTGAAGACGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| 3UTR TCA 72 bp | CACTTAAAACACGATGGTGCAAGCTCCGAAGTCAGGTaGCTAGGGATGATAATACAAGCAAGGCATTTACAG | + |
|
Preference number: 3 (lower is better) Translates to: HLKHDGASSEVR*LGMIIQARHLQ Trigger: CTGTAAATGCCTTGCTTGTATTATCATCCCTAGTCACCTGACTTCGGAGCTTGCACCATCGTGTTTTAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| 3UTR GCA 72 bp | CGGTTCTGCGAGATTCCCGCAGGACCGTGTTATTTTTaGCATTTGCTCTCATTATGGATACTTTTCTTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: RFCEIPAGPCYF*HLLSLWILFLL Trigger: TAGCAAGAAAAGTATCCATAATGAGAGCAAATGGCAAAAATAACACGGTCCTGCGGGAATCTCGCAGAACCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| 3UTR CCA 72 bp | GCCATTTGCTCTCATTATGGATACTTTTCTTGCTATTaGTACGTTTCGGGGAGTAGCTACCCAATCTTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: AICSHYGYFSCY*YVSGSSYPIFH Trigger: GTGAAAGATTGGGTAGCTACTCCCCGAAACGTACCAATAGCAAGAAAAGTATCCATAATGAGAGCAAATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| 3UTR TCA 72 bp | GCTACTGTAACACCCGAATCCATAGACGGTAAGATCTaGACCTATTTACAGCGTCTTCACTTAAAACACGAT | + |
|
Preference number: 3 (lower is better) Translates to: ATVTPESIDGKI*TYLQRLHLKHD Trigger: ATCGTGTTTTAAGTGAAGACGCTGTAAATAGGTTCAGATCTTACCGTCTATGGATTCGGGTGTTACAGTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| 3UTR GCA 72 bp | GGTGATGGAAAGAACTACATATGTACTGCAGTTGATTaGCATGGCAACCCTCCACAGAAATATGATATAGAT | + |
|
Preference number: 3 (lower is better) Translates to: GDGKNYICTAVD*HGNPPQKYDID Trigger: ATCTATATCATATTTCTGTGGAGGGTTGCCATGGCAATCAACTGCAGTACATATGTAGTTCTTTCCATCACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| 3UTR TCA 72 bp | CACACACACACATCGAACCAACATCATTTTCAGGTTTaGGAAGTAGGGAATAATCTCTGTGACAACTCATTT | + |
|
Preference number: 3 (lower is better) Translates to: HTHTSNQHHFQV*EVGNNLCDNSF Trigger: AAATGAGTTGTCACAGAGATTATTCCCTACTTCTCAAACCTGAAAATGATGTTGGTTCGATGTGTGTGTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| 3UTR TCA 72 bp | GTGACAACTCATTTTTGCAGGTACTCACTGGAGGTCTaGGAACCTTCAAATGCTGTCATTACAATTTTTATT | + |
|
Preference number: 3 (lower is better) Translates to: VTTHFCRYSLEV*EPSNAVITIFI Trigger: AATAAAAATTGTAATGACAGCATTTGAAGGTTCTCAGACCTCCAGTGAGTACCTGCAAAAATGAGTTGTCAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| CDS-3UTR CCA 90 bp | GTGGCTGGGTGCATGGCTTGGAGGTCCGCGTGGGGCCGCGGCAGTCCAAGTGGGATCGGTGCTAGAACCTaGATTTGGCTTCACAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VAGCMAWRSAWGRGSPSGIGART*IWLHKG Trigger: CCCTTTGTGAAGCCAAATCCAGGTTCTAGCACCGAT...CCCACTTGGACTGCCGCGGCCCCACGCGGACCTCCAAGCCATGCACCCAGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| CDS-3UTR CCA 90 bp | GCTGCGCCATCCATAGCCTACCGTGTCCTCCCCGGGCTCTGCAGAGGCCTGAGTCGTGGTCGTGTGCTGTaGAGAGTGTTTGCGGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AAPSIAYRVLPGLCRGLSRGRVL*RVFAVS Trigger: AGACACCGCAAACACTCTCCACAGCACACGACCACG...ACTCAGGCCTCTGCAGAGCCCGGGGAGGACACGGTAGGCTATGGATGGCGCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| 3UTR CAA 72 bp | TGCATCCCTACTATGCTCCAGGGGCAGCAAGCAGCCTaGACCTGCCGTGGCAGCCAGCACCTCCTCACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CIPTMLQGQQAA*TCRGSQHLLTP Trigger: AGGAGTGAGGAGGTGCTGGCTGCCACGGCAGGTCAAGGCTGCTTGCTGCCCCTGGAGCATAGTAGGGATGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| CDS-3UTR CCA 90 bp | GTGGCTGGGTGCATGGCTTGGAGGTCCGCGTGGGGCCGCGGCAGTCCAAGTGGGGTGAATTTCACATCTTaGTCTGGTCTGGCACAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VAGCMAWRSAWGRGSPSGVNFTS*SGLAQL Trigger: CAACTGTGCCAGACCAGACCAAGATGTGAAATTCAC...CCCACTTGGACTGCCGCGGCCCCACGCGGACCTCCAAGCCATGCACCCAGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| CDS-3UTR CCA 90 bp | GTGGCTGGGTGCATGGCTTGGAGGTCCGCGTGGGGCCGCGGCAGTCCAAGTGGGGCTAGAACCTGGATTTaGCTTCACAAAGGGACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VAGCMAWRSAWGRGSPSGARTWI*LHKGTC Trigger: ACAAGTCCCTTTGTGAAGCCAAATCCAGGTTCTAGC...CCCACTTGGACTGCCGCGGCCCCACGCGGACCTCCAAGCCATGCACCCAGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| CDS-3UTR TCA 90 bp | TGTGTGGTAGTGAAAGGCTCCCCACCACTCACCAGTCAGTCACCTCCCACCTGTCTGGTCTGGCACAGTTaGGCAGCGGGGTATTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CVVVKGSPPLTSQSPPTCLVWHS*AAGYSP Trigger: AGGAGAATACCCCGCTGCTCAACTGTGCCAGACCAG...ACAGGTGGGAGGTGACTGACTGGTGAGTGGTGGGGAGCCTTTCACTACCACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| CDS-3UTR GCA 90 bp | GTGGCTGGGTGCATGGCTTGGAGGTCCGCGTGGGGCCGCGGCAGTCCAAGTGGGAATTGTGCATCTGTCTaGTTGGTCTTTATCAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: VAGCMAWRSAWGRGSPSGNCASV*LVFINH Trigger: ATGGTTGATAAAGACCAAGCAGACAGATGCACAATT...CCCACTTGGACTGCCGCGGCCCCACGCGGACCTCCAAGCCATGCACCCAGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| CDS-3UTR TCA 90 bp | GCTGCGCCATCCATAGCCTACCGTGTCCTCCCCGGGCTCTGCAGAGGCCTGAGTAAAGGGACTTGTTGTTaGACTTCTCCCATTTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: AAPSIAYRVLPGLCRGLSKGTCC*TSPICT Trigger: GGTACAAATGGGAGAAGTTCAACAACAAGTCCCTTT...ACTCAGGCCTCTGCAGAGCCCGGGGAGGACACGGTAGGCTATGGATGGCGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| CDS-3UTR TCA 90 bp | GCGTCTTCACTTAAAACACGATGGTGCAAGCTCCGAAGTCAGGTGACTAGGGATGCCCATAGTCCCCGCTaGCCTTCTCGTAGTGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ASSLKTRWCKLRSQVTRDAHSPR*PSRSAG Trigger: GCCCGCACTACGAGAAGGTCAGCGGGGACTATGGGC...ATCCCTAGTCACCTGACTTCGGAGCTTGCACCATCGTGTTTTAAGTGAAGACGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| CDS-3UTR GCA 90 bp | GCTGCGCCATCCATAGCCTACCGTGTCCTCCCCGGGCTCTGCAGAGGCCTGAGTTGGAGATCGCAGTTCTaGACAAAACCATCAAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: AAPSIAYRVLPGLCRGLSWRSQF*TKPSKV Trigger: GACTTTTGATGGTTTTGTGCAGAACTGCGATCTCCA...ACTCAGGCCTCTGCAGAGCCCGGGGAGGACACGGTAGGCTATGGATGGCGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| CDS-3UTR GCA 90 bp | CGGGTACTGCCTTGGAGCCCGGACAGCACGGCCATAAACCAAAAACCAACGTGTGCTGTGGAGAGTGTTTaGGGTGTCTCCTGCGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: RVLPWSPDSTAINQKPTCAVESV*GVSCGT Trigger: AGTACCGCAGGAGACACCGCAAACACTCTCCACAGC...ACACGTTGGTTTTTGGTTTATGGCCGTGCTGTCCGGGCTCCAAGGCAGTACCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| CDS-3UTR CCA 90 bp | CGGGTACTGCCTTGGAGCCCGGACAGCACGGCCATAAACCAAAAACCAACGTGTCCTTGTAGTAAATGTTaGCAGGACTCTGTGGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RVLPWSPDSTAINQKPTCPCSKC*QDSVGA Trigger: TGCCCCCACAGAGTCCTGCCAACATTTACTACAAGG...ACACGTTGGTTTTTGGTTTATGGCCGTGCTGTCCGGGCTCCAAGGCAGTACCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| CDS-3UTR TCA 90 bp | CTGCGAGATTCCCGCAGGACCGTGTTATTTTTGCCATTTGCTCTCATTATGGATGCGTGGCCAGTGTGCTaGGAGACAGCGTGGTCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LRDSRRTVLFLPFALIMDAWPVC*ETAWSC Trigger: ACACGACCACGCTGTCTCTCAGCACACTGGCCACGC...ATCCATAATGAGAGCAAATGGCAAAAATAACACGGTCCTGCGGGAATCTCGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| CDS-3UTR GCA 90 bp | GCGTCTTCACTTAAAACACGATGGTGCAAGCTCCGAAGTCAGGTGACTAGGGATGACAGCGTGGTCGTGTaGTGTGGAGAGTGTTTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: ASSLKTRWCKLRSQVTRDDSVVV*CGECLR Trigger: CCGCAAACACTCTCCACAGCACACGACCACGCTGTC...ATCCCTAGTCACCTGACTTCGGAGCTTGCACCATCGTGTTTTAAGTGAAGACGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| CDS-3UTR GCA 90 bp | CTTTCACTTTTTAAAGCACTAAGCGCTGGGGTCACTTTAATCACCACCACCACGAGATTGTTCCCGGAATaGCCCGCGCTGTTGCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: LSLFKALSAGVTLITTTTRLFPE*PALLPS Trigger: CGATGGCAACAGCGCGGGGCATTCCGGGAACAATCT...CGTGGTGGTGGTGATTAAAGTGACCCCAGCGCTTAGTGCTTTAAAAAGTGAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| CDS-3UTR GCA 90 bp | CCCACCTGTCTCTGTCCTCTCAGAAAAACCAAAGCATTATCTATTTCCTTCCTGTGTGGGGGCATCTCCTaGACGATGTACACCGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PTCLCPLRKTKALSISFLCGGIS*TMYTGC Trigger: GCACCCGGTGTACATCGTGCAGGAGATGCCCCCACA...CAGGAAGGAAATAGATAATGCTTTGGTTTTTCTGAGAGGACAGAGACAGGTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| CDS-3UTR CCA 90 bp | CGGGTACTGCCTTGGAGCCCGGACAGCACGGCCATAAACCAAAAACCAACGTGTCTAAAACTATCGATCTaGAGATCGCAGTTCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RVLPWSPDSTAINQKPTCLKLSI*RSQFCT Trigger: TGTGCAGAACTGCGATCTCCAGATCGATAGTTTTAG...ACACGTTGGTTTTTGGTTTATGGCCGTGCTGTCCGGGCTCCAAGGCAGTACCCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| CDS-3UTR CCA 90 bp | CCCACCTGTCTCTGTCCTCTCAGAAAAACCAAAGCATTATCTATTTCCTTCCTGCACACCCCTCCCTCCTaGTTATCCAGGCCCTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PTCLCPLRKTKALSISFLHTPPS*LSRPSK Trigger: TTTGGAGGGCCTGGATAACCAGGAGGGAGGGGTGTG...CAGGAAGGAAATAGATAATGCTTTGGTTTTTCTGAGAGGACAGAGACAGGTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| CDS-3UTR CCA 90 bp | GATTGTCATTTTCTGCACCAGACACAAAACAGACGCACAGGACACTTCTCAATGTTCATGGCTCTTGTCTaGCACACCCCTCCCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DCHFLHQTQNRRTGHFSMFMALV*HTPPSW Trigger: CCAGGAGGGAGGGGTGTGCCAGACAAGAGCCATGAA...CATTGAGAAGTGTCCTGTGCGTCTGTTTTGTGTCTGGTGCAGAAAATGACAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| CDS-3UTR CCA 90 bp | GCGTCTTCACTTAAAACACGATGGTGCAAGCTCCGAAGTCAGGTGACTAGGGATTTGGACCGTGATTCCTaGCTGATCCAGCAGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: ASSLKTRWCKLRSQVTRDLDRDS*LIQQNL Trigger: CAAGTTCTGCTGGATCAGCCAGGAATCACGGTCCAA...ATCCCTAGTCACCTGACTTCGGAGCTTGCACCATCGTGTTTTAAGTGAAGACGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| CDS-3UTR CCA 90 bp | GATTGTCATTTTCTGCACCAGACACAAAACAGACGCACAGGACACTTCTCAATGGTTGGCAGGACTCTGTaGGGGCATCTCCTGCACGAT | + |
|
Preference number: 4 (lower is better) Translates to: DCHFLHQTQNRRTGHFSMVGRTL*GHLLHD Trigger: ATCGTGCAGGAGATGCCCCCACAGAGTCCTGCCAAC...CATTGAGAAGTGTCCTGTGCGTCTGTTTTGTGTCTGGTGCAGAAAATGACAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| CDS-3UTR TCA 90 bp | GATTGTCATTTTCTGCACCAGACACAAAACAGACGCACAGGACACTTCTCAATGCGTCTTGTTGGACCGTaGTTCCTGGCTGATCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DCHFLHQTQNRRTGHFSMRLVGP*FLADPA Trigger: TGCTGGATCAGCCAGGAATCACGGTCCAACAAGACG...CATTGAGAAGTGTCCTGTGCGTCTGTTTTGTGTCTGGTGCAGAAAATGACAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| CDS-3UTR CCA 90 bp | GCGTCTTCACTTAAAACACGATGGTGCAAGCTCCGAAGTCAGGTGACTAGGGATTTTCACATCTTGGTCTaGTCTGGCACAGTTGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ASSLKTRWCKLRSQVTRDFHILV*SGTVEQ Trigger: CTGCTCAACTGTGCCAGACCAGACCAAGATGTGAAA...ATCCCTAGTCACCTGACTTCGGAGCTTGCACCATCGTGTTTTAAGTGAAGACGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| CDS-3UTR TCA 90 bp | GCGTCTTCACTTAAAACACGATGGTGCAAGCTCCGAAGTCAGGTGACTAGGGATCTTGTCCAACTTTCATaGGGATCTTCATGGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ASSLKTRWCKLRSQVTRDLVQLS*GSSWLL Trigger: CAAGAGCCATGAAGATCCTCATGAAAGTTGGACAAG...ATCCCTAGTCACCTGACTTCGGAGCTTGCACCATCGTGTTTTAAGTGAAGACGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| CDS-3UTR TCA 90 bp | CCCACCTGTCTCTGTCCTCTCAGAAAAACCAAAGCATTATCTATTTCCTTCCTGACCGTGATTCCTGGCTaGTCCAGCAGAACTTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: PTCLCPLRKTKALSISFLTVIPG*SSRTCI Trigger: GATGCAAGTTCTGCTGGATCAGCCAGGAATCACGGT...CAGGAAGGAAATAGATAATGCTTTGGTTTTTCTGAGAGGACAGAGACAGGTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| 3UTR CAA 72 bp | GACACAAAACAGACGCACAGGACACTTCTCAATGGGTaGCAGGTAACTCAACTCTTCATCAATTCATCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: DTKQTHRTLLNG*QVTQLFINSSD Trigger: ATCGGATGAATTGATGAAGAGTTGAGTTACCTGCAACCCATTGAGAAGTGTCCTGTGCGTCTGTTTTGTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
||
| CDS GCA 90 bp | CCTCGCTTGGGCGTGGCCAGTGTGCTGAGAGACAGCGTGGTCGTGTaGTGTGGAGAGTGTTTGCGGTGTCTCCTGCGGTACTTGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PRLGVASVLRDSVVV*CGECLRCLLRYLSS Trigger: GCTGCTCAAGTACCGCAGGAGACACCGCAAACACTCTCCACAGCACACGACCACGCTGTCTCTCAGCACACTGGCCACGCCCAAGCGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001319.15 ENSMUST00000152698.2 |
||
| CDS TCA 90 bp | CCGAGCCATTGTTGTTGCCACCTCGCTTGGGCGTGGCCAGTGTGCTaGGAGACAGCGTGGTCGTGTGCTGTGGAGAGTGTTTGCGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: PSHCCCHLAWAWPVC*ETAWSCAVESVCGV Trigger: GACACCGCAAACACTCTCCACAGCACACGACCACGCTGTCTCTCAGCACACTGGCCACGCCCAAGCGAGGTGGCAACAACAATGGCTCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001319.15 ENSMUST00000152698.2 |
||
| CDS CCA 90 bp | CTTGGGCGTGGCCAGTGTGCTGAGAGACAGCGTGGTCGTGTGCTGTaGAGAGTGTTTGCGGTGTCTCCTGCGGTACTTGAGCAGCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LGRGQCAERQRGRVL*RVFAVSPAVLEQQH Trigger: GTGCTGCTGCTCAAGTACCGCAGGAGACACCGCAAACACTCTCCACAGCACACGACCACGCTGTCTCTCAGCACACTGGCCACGCCCAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001319.15 ENSMUST00000152698.2 |
||
| CDS-3UTR CAA 90 bp | GTGGCTGGGTGCATGGCTTGGAGGTCCGCGTGGGGCCGCGGCAGTCCAAGTGGGAGCAGAACTTGCATCTaGTCCAACTTTCATGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: VAGCMAWRSAWGRGSPSGSRTCI*SNFHED Trigger: ATCCTCATGAAAGTTGGACAAGATGCAAGTTCTGCT...CCCACTTGGACTGCCGCGGCCCCACGCGGACCTCCAAGCCATGCACCCAGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| CDS GCA 90 bp | CCTGCGAATAAGGCCACTTCGGAACCCAGGAGATTGTTCCCGGAATaGCCCGCGCTGTTGCCATCGGTGCTAGAACCTGGATTTGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: PANKATSEPRRLFPE*PALLPSVLEPGFGF Trigger: GAAGCCAAATCCAGGTTCTAGCACCGATGGCAACAGCGCGGGGCATTCCGGGAACAATCTCCTGGGTTCCGAAGTGGCCTTATTCGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001319.15 ENSMUST00000152698.2 |
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| CDS-3UTR CAA 90 bp | ACGGTTCTGCGAGATTCCCGCAGGACCGTGTTATTTTTGCCATTTGCTCTCATTTTGTTGCCACCTCGCTaGGGCGTGGCCAGTGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: TVLRDSRRTVLFLPFALILLPPR*GVASVL Trigger: CAGCACACTGGCCACGCCCAAGCGAGGTGGCAACAA...AATGAGAGCAAATGGCAAAAATAACACGGTCCTGCGGGAATCTCGCAGAACCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| CDS-3UTR CAA 90 bp | CGGGTACTGCCTTGGAGCCCGGACAGCACGGCCATAAACCAAAAACCAACGTGTCTGATCCAGCAGAACTaGCATCTTGTCCAACTTTCA | + |
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Preference number: 5 (lower is better) Translates to: RVLPWSPDSTAINQKPTCLIQQN*HLVQLS Trigger: TGAAAGTTGGACAAGATGCAAGTTCTGCTGGATCAG...ACACGTTGGTTTTTGGTTTATGGCCGTGCTGTCCGGGCTCCAAGGCAGTACCCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| CDS-3UTR CAA 90 bp | CTTTCACTTTTTAAAGCACTAAGCGCTGGGGTCACTTTAATCACCACCACCACGGCTCTGGACGTCTTGTaGGACCGTGATTCCTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: LSLFKALSAGVTLITTTTALDVL*DRDSWL Trigger: CAGCCAGGAATCACGGTCCAACAAGACGTCCAGAGC...CGTGGTGGTGGTGATTAAAGTGACCCCAGCGCTTAGTGCTTTAAAAAGTGAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| CDS-3UTR CAA 90 bp | ACGGTTCTGCGAGATTCCCGCAGGACCGTGTTATTTTTGCCATTTGCTCTCATTCTAGCTCTGGACGTCTaGTTGGACCGTGATTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: TVLRDSRRTVLFLPFALILALDV*LDRDSW Trigger: CCAGGAATCACGGTCCAACAAGACGTCCAGAGCTAG...AATGAGAGCAAATGGCAAAAATAACACGGTCCTGCGGGAATCTCGCAGAACCGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| CDS-3UTR CAA 90 bp | CGGGTACTGCCTTGGAGCCCGGACAGCACGGCCATAAACCAAAAACCAACGTGTTCACAAAGGGACTTGTaGTTGAACTTCTCCCATTTG | + |
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Preference number: 5 (lower is better) Translates to: RVLPWSPDSTAINQKPTCSQRDL*LNFSHL Trigger: CAAATGGGAGAAGTTCAACAACAAGTCCCTTTGTGA...ACACGTTGGTTTTTGGTTTATGGCCGTGCTGTCCGGGCTCCAAGGCAGTACCCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| CDS-3UTR CAA 90 bp | GATTGTCATTTTCTGCACCAGACACAAAACAGACGCACAGGACACTTCTCAATGGAATGCCCCGCGCTGTaGCCATCGGTGCTAGAACCT | + |
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Preference number: 5 (lower is better) Translates to: DCHFLHQTQNRRTGHFSMECPAL*PSVLEP Trigger: AGGTTCTAGCACCGATGGCAACAGCGCGGGGCATTC...CATTGAGAAGTGTCCTGTGCGTCTGTTTTGTGTCTGGTGCAGAAAATGACAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| CDS TCA 90 bp | CTCCCATTTGTACCAGCTTCTAGCTCTGGACGTCTTGTTGGACCGTaGTTCCTGGCTGATCCAGCAGAACTTGCATCTTGTCCAACTTTC | + |
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Preference number: 5 (lower is better) Translates to: LPFVPASSSGRLVGP*FLADPAELASCPTF Trigger: GAAAGTTGGACAAGATGCAAGTTCTGCTGGATCAGCCAGGAATCACGGTCCAACAAGACGTCCAGAGCTAGAAGCTGGTACAAATGGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| CDS-3UTR CAA 90 bp | CGGGTACTGCCTTGGAGCCCGGACAGCACGGCCATAAACCAAAAACCAACGTGTGTTAGGGCTGAATTCTaGAAACTTGATGGTGAATTT | + |
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Preference number: 5 (lower is better) Translates to: RVLPWSPDSTAINQKPTCVRAEF*KLDGEF Trigger: AAATTCACCATCAAGTTTCAAGAATTCAGCCCTAAC...ACACGTTGGTTTTTGGTTTATGGCCGTGCTGTCCGGGCTCCAAGGCAGTACCCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| CDS-3UTR CAA 90 bp | GATTGTCATTTTCTGCACCAGACACAAAACAGACGCACAGGACACTTCTCAATGTTGAACTTCTCCCATTaGTACCAGCTTCTAGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: DCHFLHQTQNRRTGHFSMLNFSH*YQLLAL Trigger: CAGAGCTAGAAGCTGGTACAAATGGGAGAAGTTCAA...CATTGAGAAGTGTCCTGTGCGTCTGTTTTGTGTCTGGTGCAGAAAATGACAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| CDS-3UTR CAA 90 bp | CCCACCTGTCTCTGTCCTCTCAGAAAAACCAAAGCATTATCTATTTCCTTCCTGCAAAGGGACTTGTTGTaGAACTTCTCCCATTTGTAC | + |
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Preference number: 5 (lower is better) Translates to: PTCLCPLRKTKALSISFLQRDLL*NFSHLY Trigger: GTACAAATGGGAGAAGTTCAACAACAAGTCCCTTTG...CAGGAAGGAAATAGATAATGCTTTGGTTTTTCTGAGAGGACAGAGACAGGTGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| CDS GCA 72 bp | GGCGTGGCCAGTGTGCTGAGAGACAGCGTGGTCGTGTaGTGTGGAGAGTGTTTGCGGTGTCTCCTGCGGTAC | + |
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Preference number: 6 (lower is better) Translates to: GVASVLRDSVVV*CGECLRCLLRY Trigger: GTACCGCAGGAGACACCGCAAACACTCTCCACAGCACACGACCACGCTGTCTCTCAGCACACTGGCCACGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001319.15 ENSMUST00000152698.2 |
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| CDS TCA 72 bp | TGTTGTTGCCACCTCGCTTGGGCGTGGCCAGTGTGCTaGGAGACAGCGTGGTCGTGTGCTGTGGAGAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: CCCHLAWAWPVC*ETAWSCAVESV Trigger: AACACTCTCCACAGCACACGACCACGCTGTCTCTCAGCACACTGGCCACGCCCAAGCGAGGTGGCAACAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001319.15 ENSMUST00000152698.2 |
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| CDS GCA 72 bp | AAGGCCACTTCGGAACCCAGGAGATTGTTCCCGGAATaGCCCGCGCTGTTGCCATCGGTGCTAGAACCTGGA | + |
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Preference number: 6 (lower is better) Translates to: KATSEPRRLFPE*PALLPSVLEPG Trigger: TCCAGGTTCTAGCACCGATGGCAACAGCGCGGGGCATTCCGGGAACAATCTCCTGGGTTCCGAAGTGGCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001319.15 ENSMUST00000152698.2 |
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| CDS CCA 72 bp | GGCCAGTGTGCTGAGAGACAGCGTGGTCGTGTGCTGTaGAGAGTGTTTGCGGTGTCTCCTGCGGTACTTGAG | + |
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Preference number: 6 (lower is better) Translates to: GQCAERQRGRVL*RVFAVSPAVLE Trigger: CTCAAGTACCGCAGGAGACACCGCAAACACTCTCCACAGCACACGACCACGCTGTCTCTCAGCACACTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001319.15 ENSMUST00000152698.2 |
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| CDS CAA 72 bp | ATCCCTGCGAATAAGGCCACTTCGGAACCCAGGAGATaGTTCCCGGAATGCCCCGCGCTGTTGCCATCGGTG | + |
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Preference number: 6 (lower is better) Translates to: IPANKATSEPRR*FPECPALLPSV Trigger: CACCGATGGCAACAGCGCGGGGCATTCCGGGAACAATCTCCTGGGTTCCGAAGTGGCCTTATTCGCAGGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001319.15 ENSMUST00000152698.2 |
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| CDS CAA 90 bp | CCTGATGCGATCCCTGCGAATAAGGCCACTTCGGAACCCAGGAGATaGTTCCCGGAATGCCCCGCGCTGTTGCCATCGGTGCTAGAACCT | + |
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Preference number: 6 (lower is better) Translates to: PDAIPANKATSEPRR*FPECPALLPSVLEP Trigger: AGGTTCTAGCACCGATGGCAACAGCGCGGGGCATTCCGGGAACAATCTCCTGGGTTCCGAAGTGGCCTTATTCGCAGGGATCGCATCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001319.15 ENSMUST00000152698.2 |
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| CDS CAA 90 bp | GCCAGTGTGCTGAGAGACAGCGTGGTCGTGTGCTGTGGAGAGTGTTaGCGGTGTCTCCTGCGGTACTTGAGCAGCAGCACCACCAAAGTG | + |
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Preference number: 6 (lower is better) Translates to: ASVLRDSVVVCCGEC*RCLLRYLSSSTTKV Trigger: CACTTTGGTGGTGCTGCTGCTCAAGTACCGCAGGAGACACCGCAAACACTCTCCACAGCACACGACCACGCTGTCTCTCAGCACACTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001319.15 ENSMUST00000152698.2 |
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| CDS CAA 90 bp | ATGATAACGTCACTGGGCTCCGAGCCATTGTTGTTGCCACCTCGCTaGGGCGTGGCCAGTGTGCTGAGAGACAGCGTGGTCGTGTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: MITSLGSEPLLLPPR*GVASVLRDSVVVCC Trigger: ACAGCACACGACCACGCTGTCTCTCAGCACACTGGCCACGCCCAAGCGAGGTGGCAACAACAATGGCTCGGAGCCCAGTGACGTTATCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001319.15 ENSMUST00000152698.2 |
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| CDS CAA 90 bp | GTCCTTAGTGGTATGATAACGTCACTGGGCTCCGAGCCATTGTTGTaGCCACCTCGCTTGGGCGTGGCCAGTGTGCTGAGAGACAGCGTG | + |
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Preference number: 6 (lower is better) Translates to: VLSGMITSLGSEPLL*PPRLGVASVLRDSV Trigger: CACGCTGTCTCTCAGCACACTGGCCACGCCCAAGCGAGGTGGCAACAACAATGGCTCGGAGCCCAGTGACGTTATCATACCACTAAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001319.15 ENSMUST00000152698.2 |
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| CDS CAA 90 bp | GCAGTCCTTAGTGGTATGATAACGTCACTGGGCTCCGAGCCATTGTaGTTGCCACCTCGCTTGGGCGTGGCCAGTGTGCTGAGAGACAGC | + |
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Preference number: 6 (lower is better) Translates to: AVLSGMITSLGSEPL*LPPRLGVASVLRDS Trigger: GCTGTCTCTCAGCACACTGGCCACGCCCAAGCGAGGTGGCAACAACAATGGCTCGGAGCCCAGTGACGTTATCATACCACTAAGGACTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001319.15 ENSMUST00000152698.2 |
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| CDS CAA 72 bp | GGTATGATAACGTCACTGGGCTCCGAGCCATTGTTGTaGCCACCTCGCTTGGGCGTGGCCAGTGTGCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: GMITSLGSEPLL*PPRLGVASVLR Trigger: TCTCAGCACACTGGCCACGCCCAAGCGAGGTGGCAACAACAATGGCTCGGAGCCCAGTGACGTTATCATACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001319.15 ENSMUST00000152698.2 |
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| CDS CAA 72 bp | AGTGGTATGATAACGTCACTGGGCTCCGAGCCATTGTaGTTGCCACCTCGCTTGGGCGTGGCCAGTGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: SGMITSLGSEPL*LPPRLGVASVL Trigger: CAGCACACTGGCCACGCCCAAGCGAGGTGGCAACAACAATGGCTCGGAGCCCAGTGACGTTATCATACCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001319.15 ENSMUST00000152698.2 |
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| CDS CAA 90 bp | TCTGCAGTCCTTAGTGGTATGATAACGTCACTGGGCTCCGAGCCATaGTTGTTGCCACCTCGCTTGGGCGTGGCCAGTGTGCTGAGAGAC | + |
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Preference number: 6 (lower is better) Translates to: SAVLSGMITSLGSEP*LLPPRLGVASVLRD Trigger: GTCTCTCAGCACACTGGCCACGCCCAAGCGAGGTGGCAACAACAATGGCTCGGAGCCCAGTGACGTTATCATACCACTAAGGACTGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001319.15 ENSMUST00000152698.2 |
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| CDS CAA 72 bp | GAACCCAGGAGATTGTTCCCGGAATGCCCCGCGCTGTaGCCATCGGTGCTAGAACCTGGATTTGGCTTCACA | + |
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Preference number: 6 (lower is better) Translates to: EPRRLFPECPAL*PSVLEPGFGFT Trigger: TGTGAAGCCAAATCCAGGTTCTAGCACCGATGGCAACAGCGCGGGGCATTCCGGGAACAATCTCCTGGGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001319.15 ENSMUST00000152698.2 |
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| CDS CAA 72 bp | CTTAGTGGTATGATAACGTCACTGGGCTCCGAGCCATaGTTGTTGCCACCTCGCTTGGGCGTGGCCAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: LSGMITSLGSEP*LLPPRLGVASV Trigger: CACACTGGCCACGCCCAAGCGAGGTGGCAACAACAATGGCTCGGAGCCCAGTGACGTTATCATACCACTAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001319.15 ENSMUST00000152698.2 |
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| CDS CAA 90 bp | GTGGTCGTGTGCTGTGGAGAGTGTTTGCGGTGTCTCCTGCGGTACTaGAGCAGCAGCACCACCAAAGTGATGATGATGACGATGAAGATG | + |
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Preference number: 6 (lower is better) Translates to: VVVCCGECLRCLLRY*SSSTTKVMMMTMKM Trigger: CATCTTCATCGTCATCATCATCACTTTGGTGGTGCTGCTGCTCAAGTACCGCAGGAGACACCGCAAACACTCTCCACAGCACACGACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001319.15 ENSMUST00000152698.2 |
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| CDS TCA 72 bp | GTACCAGCTTCTAGCTCTGGACGTCTTGTTGGACCGTaGTTCCTGGCTGATCCAGCAGAACTTGCATCTTGT | + |
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Preference number: 6 (lower is better) Translates to: VPASSSGRLVGP*FLADPAELASC Trigger: ACAAGATGCAAGTTCTGCTGGATCAGCCAGGAATCACGGTCCAACAAGACGTCCAGAGCTAGAAGCTGGTAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| CDS CAA 72 bp | TCCCATTTGTACCAGCTTCTAGCTCTGGACGTCTTGTaGGACCGTGATTCCTGGCTGATCCAGCAGAACTTG | + |
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Preference number: 6 (lower is better) Translates to: SHLYQLLALDVL*DRDSWLIQQNL Trigger: CAAGTTCTGCTGGATCAGCCAGGAATCACGGTCCAACAAGACGTCCAGAGCTAGAAGCTGGTACAAATGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001319.15 ENSMUST00000152698.2 |
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| CDS CAA 72 bp | TTCTCCCATTTGTACCAGCTTCTAGCTCTGGACGTCTaGTTGGACCGTGATTCCTGGCTGATCCAGCAGAAC | + |
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Preference number: 6 (lower is better) Translates to: FSHLYQLLALDV*LDRDSWLIQQN Trigger: GTTCTGCTGGATCAGCCAGGAATCACGGTCCAACAAGACGTCCAGAGCTAGAAGCTGGTACAAATGGGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001319.15 ENSMUST00000152698.2 |
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| CDS CCA 72 bp | CTTCTAGCTCTGGACGTCTTGTTGGACCGTGATTCCTaGCTGATCCAGCAGAACTTGCATCTTGTCCAACTT | + |
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Preference number: 6 (lower is better) Translates to: LLALDVLLDRDS*LIQQNLHLVQL Trigger: AAGTTGGACAAGATGCAAGTTCTGCTGGATCAGCCAGGAATCACGGTCCAACAAGACGTCCAGAGCTAGAAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| CDS CAA 90 bp | TTGAACTTCTCCCATTTGTACCAGCTTCTAGCTCTGGACGTCTTGTaGGACCGTGATTCCTGGCTGATCCAGCAGAACTTGCATCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: LNFSHLYQLLALDVL*DRDSWLIQQNLHLV Trigger: GACAAGATGCAAGTTCTGCTGGATCAGCCAGGAATCACGGTCCAACAAGACGTCCAGAGCTAGAAGCTGGTACAAATGGGAGAAGTTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| CDS TCA 72 bp | GTACCAGCTTCTAGCTCTGGACGTCTTGTTGGACCGTaGTTCCTGGCTGATCCAGCAGAACTTGCATATATA | + |
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Preference number: 6 (lower is better) Translates to: VPASSSGRLVGP*FLADPAELAYI Trigger: TATATATGCAAGTTCTGCTGGATCAGCCAGGAATCACGGTCCAACAAGACGTCCAGAGCTAGAAGCTGGTAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152698.2 |
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| CDS CAA 90 bp | TTGTTGAACTTCTCCCATTTGTACCAGCTTCTAGCTCTGGACGTCTaGTTGGACCGTGATTCCTGGCTGATCCAGCAGAACTTGCATCTT | + |
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Preference number: 6 (lower is better) Translates to: LLNFSHLYQLLALDV*LDRDSWLIQQNLHL Trigger: AAGATGCAAGTTCTGCTGGATCAGCCAGGAATCACGGTCCAACAAGACGTCCAGAGCTAGAAGCTGGTACAAATGGGAGAAGTTCAACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001319.15 |
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| CDS CAA 90 bp | CTGGATTTGGCTTCACAAAGGGACTTGTTGTTGAACTTCTCCCATTaGTACCAGCTTCTAGCTCTGGACGTCTTGTTGGACCGTGATTCC | + |
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Preference number: 6 (lower is better) Translates to: LDLASQRDLLLNFSH*YQLLALDVLLDRDS Trigger: GGAATCACGGTCCAACAAGACGTCCAGAGCTAGAAGCTGGTACAAATGGGAGAAGTTCAACAACAAGTCCCTTTGTGAAGCCAAATCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001319.15 ENSMUST00000152698.2 |
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| CDS CAA 90 bp | TTGTTGAACTTCTCCCATTTGTACCAGCTTCTAGCTCTGGACGTCTaGTTGGACCGTGATTCCTGGCTGATCCAGCAGAACTTGCATATA | + |
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Preference number: 6 (lower is better) Translates to: LLNFSHLYQLLALDV*LDRDSWLIQQNLHI Trigger: TATATGCAAGTTCTGCTGGATCAGCCAGGAATCACGGTCCAACAAGACGTCCAGAGCTAGAAGCTGGTACAAATGGGAGAAGTTCAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152698.2 |
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| CDS CAA 72 bp | GCTTCACAAAGGGACTTGTTGTTGAACTTCTCCCATTaGTACCAGCTTCTAGCTCTGGACGTCTTGTTGGAC | + |
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Preference number: 6 (lower is better) Translates to: ASQRDLLLNFSH*YQLLALDVLLD Trigger: GTCCAACAAGACGTCCAGAGCTAGAAGCTGGTACAAATGGGAGAAGTTCAACAACAAGTCCCTTTGTGAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001319.15 ENSMUST00000152698.2 |
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| CDS CAA 72 bp | ATGGTGAATTTCACATCTTGGTCTGGTCTGGCACAGTaGAGCAGCGGGGTATTCTCCTTCTTAATTGTGCAT | + |
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Preference number: 6 (lower is better) Translates to: MVNFTSWSGLAQ*SSGVFSFLIVH Trigger: ATGCACAATTAAGAAGGAGAATACCCCGCTGCTCAACTGTGCCAGACCAGACCAAGATGTGAAATTCACCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001319.15 ENSMUST00000152698.2 |
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