Pregenerated sensors for EFNB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031217Ensembl transcript IDs: ENSMUST00000052839.7
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCACAGTTGAGTGGCAGTCTGTTAGCAGCCGTGCTGCCAAGGAGCTaGGGTCAAAGTGCACTGCAGGCTGGCCCAGCCCCAAGCAGCCTC | + |
|
Preference number: 1 (lower is better) Translates to: AQLSGSLLAAVLPRS*GQSALQAGPAPSSL Trigger: GAGGCTGCTTGGGGCTGGGCCAGCCTGCAGTGCACTTTGACCCCAGCTCCTTGGCAGCACGGCTGCTAACAGACTGCCACTCAACTGTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| 3UTR GCA 90 bp | TGGCAGTCTGTTAGCAGCCGTGCTGCCAAGGAGCTGGGGTCAAAGTaGACTGCAGGCTGGCCCAGCCCCAAGCAGCCTCTTCCTCTTTCC | + |
|
Preference number: 1 (lower is better) Translates to: WQSVSSRAAKELGSK*TAGWPSPKQPLPLS Trigger: GGAAAGAGGAAGAGGCTGCTTGGGGCTGGGCCAGCCTGCAGTGCACTTTGACCCCAGCTCCTTGGCAGCACGGCTGCTAACAGACTGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| 3UTR CCA 90 bp | CTCCTTCCATGGCAGCCCTGGGAGTGCCTGCGAGGCACAGTTGAGTaGCAGTCTGTTAGCAGCCGTGCTGCCAAGGAGCTGGGGTCAAAG | + |
|
Preference number: 1 (lower is better) Translates to: LLPWQPWECLRGTVE*QSVSSRAAKELGSK Trigger: CTTTGACCCCAGCTCCTTGGCAGCACGGCTGCTAACAGACTGCCACTCAACTGTGCCTCGCAGGCACTCCCAGGGCTGCCATGGAAGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| 3UTR-3UTR CCA 90 bp | GGGCAGGGCCAGGGGGCTACCTCCCTGCCTGCAGTCCGTCAGTGTCCAACCCTGAGGCCATGTGTCCTGTaGGGCCTGAGGCCATGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: GQGQGATSLPAVRQCPTLRPCVL*GLRPCW Trigger: CCAGCATGGCCTCAGGCCCCACAGGACACATGGCCT...CAGGGTTGGACACTGACGGACTGCAGGCAGGGAGGTAGCCCCCTGGCCCTGCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| 3UTR CAA 90 bp | CCCAGCTCCTTCCATGGCAGCCCTGGGAGTGCCTGCGAGGCACAGTaGAGTGGCAGTCTGTTAGCAGCCGTGCTGCCAAGGAGCTGGGGT | + |
|
Preference number: 2 (lower is better) Translates to: PSSFHGSPGSACEAQ*SGSLLAAVLPRSWG Trigger: ACCCCAGCTCCTTGGCAGCACGGCTGCTAACAGACTGCCACTCAACTGTGCCTCGCAGGCACTCCCAGGGCTGCCATGGAAGGAGCTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| 3UTR-3UTR TCA 90 bp | TGCTGCCAAGGAGCTGGGGTCAAAGTGCACTGCAGGCTGGCCCAGCCCCAAGCACCTCCCCCACTCCCCTaGACTACTAAGGAGTCTATA | + |
|
Preference number: 2 (lower is better) Translates to: CCQGAGVKVHCRLAQPQAPPPLP*TTKESI Trigger: TATAGACTCCTTAGTAGTTCAGGGGAGTGGGGGAGG...TGCTTGGGGCTGGGCCAGCCTGCAGTGCACTTTGACCCCAGCTCCTTGGCAGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| 3UTR-3UTR GCA 90 bp | TTGAGTGGCAGTCTGTTAGCAGCCGTGCTGCCAAGGAGCTGGGGTCAAAGTGCAGGCTACCTCCCTGCCTaGAGTCCGTCAGTGTCCAAC | + |
|
Preference number: 2 (lower is better) Translates to: LSGSLLAAVLPRSWGQSAGYLPA*SPSVSN Trigger: GTTGGACACTGACGGACTGCAGGCAGGGAGGTAGCC...TGCACTTTGACCCCAGCTCCTTGGCAGCACGGCTGCTAACAGACTGCCACTCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| 3UTR-3UTR CCA 90 bp | AGTGGCAGTCTGTTAGCAGCCGTGCTGCCAAGGAGCTGGGGTCAAAGTGCACTGCAGGCCCTCTTAGACTaGGTCAGGCCAGGCTCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: SGSLLAAVLPRSWGQSALQALLD*VRPGSE Trigger: TTCTGAGCCTGGCCTGACCCAGTCTAAGAGGGCCTG...CAGTGCACTTTGACCCCAGCTCCTTGGCAGCACGGCTGCTAACAGACTGCCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| 3UTR-3UTR CCA 90 bp | TTGAGTGGCAGTCTGTTAGCAGCCGTGCTGCCAAGGAGCTGGGGTCAAAGTGCAGGGCAAATAGCCACCTaGGCACCTCACCTCCCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: LSGSLLAAVLPRSWGQSAGQIAT*APHLPP Trigger: TGGAGGGAGGTGAGGTGCCCAGGTGGCTATTTGCCC...TGCACTTTGACCCCAGCTCCTTGGCAGCACGGCTGCTAACAGACTGCCACTCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| 3UTR CAA 90 bp | TTTGGTAGAAGGGTGGTAGTCACTACCCCACTGCTAGGAACAGCATaGTCTCATGAGGGTCCAAAAAGGAGGGTGGCGCTCTTCTCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: FGRRVVVTTPLLGTA*SHEGPKRRVALFSP Trigger: AGGAGAGAAGAGCGCCACCCTCCTTTTTGGACCCTCATGAGACAATGCTGTTCCTAGCAGTGGGGTAGTGACTACCACCCTTCTACCAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| 3UTR GCA 72 bp | CAGCCGTGCTGCCAAGGAGCTGGGGTCAAAGTGCACTaGAGGCTGGCCCAGCCCCAAGCAGCCTCTTCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QPCCQGAGVKVH*RLAQPQAASSS Trigger: AGAGGAAGAGGCTGCTTGGGGCTGGGCCAGCCTGCAGTGCACTTTGACCCCAGCTCCTTGGCAGCACGGCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| 3UTR CCA 72 bp | TGGCAGCCCTGGGAGTGCCTGCGAGGCACAGTTGAGTaGCAGTCTGTTAGCAGCCGTGCTGCCAAGGAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: WQPWECLRGTVE*QSVSSRAAKEL Trigger: CAGCTCCTTGGCAGCACGGCTGCTAACAGACTGCCACTCAACTGTGCCTCGCAGGCACTCCCAGGGCTGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| 3UTR CCA 72 bp | GGTCCAAAAAGGAGGGTGGCGCTCTTCTCTCCTCGGTaGGCAGAAATAGCCCTGGCCTACCCTCCCCCACTC | + |
|
Preference number: 3 (lower is better) Translates to: GPKRRVALFSPR*AEIALAYPPPL Trigger: GAGTGGGGGAGGGTAGGCCAGGGCTATTTCTGCCCACCGAGGAGAGAAGAGCGCCACCCTCCTTTTTGGACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| 3UTR-3UTR CAA 90 bp | GGAGCTGGGGTCAAAGTGCACTGCAGGCTGGCCCAGCCCCAAGCAGCCTCTTCCCTTAAGATCTCCACCTaGAACCAAAGATGCCAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: GAGVKVHCRLAQPQAASSLKIST*NQRCQR Trigger: TCTTTGGCATCTTTGGTTCAAGGTGGAGATCTTAAG...GGAAGAGGCTGCTTGGGGCTGGGCCAGCCTGCAGTGCACTTTGACCCCAGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| 3UTR-3UTR CAA 90 bp | AGTGGCAGTCTGTTAGCAGCCGTGCTGCCAAGGAGCTGGGGTCAAAGTGCACTGCTGCTAGGAACAGCATaGTCTCATGAGGGTCCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: SGSLLAAVLPRSWGQSALLLGTA*SHEGPK Trigger: TTTTGGACCCTCATGAGACAATGCTGTTCCTAGCAG...CAGTGCACTTTGACCCCAGCTCCTTGGCAGCACGGCTGCTAACAGACTGCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS-3UTR GCA 90 bp | GGGCAGGGCCAGGGGGCTACCTCCCTGCCTGCAGTCCGTCAGTGTCCAACCCTGCTCGTAGGGCCGCCCTaGTTCTGCTCGGGGGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GQGQGATSLPAVRQCPTLLVGPP*FCSGAD Trigger: ATCTGCCCCCGAGCAGAAGCAGGGCGGCCCTACGAG...CAGGGTTGGACACTGACGGACTGCAGGCAGGGAGGTAGCCCCCTGGCCCTGCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS-3UTR TCA 90 bp | CTGCCCCAGGCCCTCTTAGACTGGGTCAGGCCAGGCTCAGAAAGCCTGGGAAGGGGCTGGCTAGGGTACTaGGCGAGAGGGCAGCCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LPQALLDWVRPGSESLGRGWLGY*ARGQPP Trigger: GGGCGGCTGCCCTCTCGCTCAGTACCCTAGCCAGCC...CCTTCCCAGGCTTTCTGAGCCTGGCCTGACCCAGTCTAAGAGGGCCTGGGGCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS-3UTR CCA 90 bp | GCAGGGGTGTGGGGGAGAAGAGAGCGGCCGATCCAGGCCATGTGTCCTGTGGGGTCTTGGCCAACGGCGTaGCAAGCCGGCACAGCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AGVWGRRERPIQAMCPVGSWPTA*QAGTAS Trigger: TGACGCTGTGCCGGCTTGCCACGCCGTTGGCCAAGA...CCCCACAGGACACATGGCCTGGATCGGCCGCTCTCTTCTCCCCCACACCCCTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS-3UTR CCA 90 bp | GGAGCTGGGGTCAAAGTGCACTGCAGGCTGGCCCAGCCCCAAGCAGCCTCTTCCCGGGCTCCAGGTTCTTaGCCAACGGCGTGGCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GAGVKVHCRLAQPQAASSRAPGS*PTAWQA Trigger: GGCTTGCCACGCCGTTGGCCAAGAACCTGGAGCCCG...GGAAGAGGCTGCTTGGGGCTGGGCCAGCCTGCAGTGCACTTTGACCCCAGCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS-3UTR TCA 90 bp | GGGCAGGGCCAGGGGGCTACCTCCCTGCCTGCAGTCCGTCAGTGTCCAACCCTGCTGCTCGGGGGCAGATaGTGTCCAGCTTGTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GQGQGATSLPAVRQCPTLLLGGR*CPACLQ Trigger: TTGGAGACAAGCTGGACATCATCTGCCCCCGAGCAG...CAGGGTTGGACACTGACGGACTGCAGGCAGGGAGGTAGCCCCCTGGCCCTGCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS-3UTR GCA 90 bp | GGGGGCTACCTCCCTGCCTGCAGTCCGTCAGTGTCCAACCCTGCCCTCCTAGAAGGGCCGCCCTGCTTCTaGTCGGGGGCAGATGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: GGYLPACSPSVSNPALLEGPPCF*SGADDV Trigger: GACATCATCTGCCCCCGAGCAGAAGCAGGGCGGCCC...TTCTAGGAGGGCAGGGTTGGACACTGACGGACTGCAGGCAGGGAGGTAGCCCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS-3UTR GCA 90 bp | GGGCAGGGCCAGGGGGCTACCTCCCTGCCTGCAGTCCGTCAGTGTCCAACCCTGGATCAAGCACAGTGCTaGAAGCAGCCGCCTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GQGQGATSLPAVRQCPTLDQAQC*KQPPAL Trigger: CAGAGCAGGCGGCTGCTTGCAGCACTGTGCTTGATC...CAGGGTTGGACACTGACGGACTGCAGGCAGGGAGGTAGCCCCCTGGCCCTGCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS-3UTR GCA 90 bp | GGGGGCTACCTCCCTGCCTGCAGTCCGTCAGTGTCCAACCCTGCCCTCCTAGAAGCTGCCACCGCCACCTaGACCTGGGCCACTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GGYLPACSPSVSNPALLEAATAT*TWATLL Trigger: GAGAAGAGTGGCCCAGGTGCAGGTGGCGGTGGCAGC...TTCTAGGAGGGCAGGGTTGGACACTGACGGACTGCAGGCAGGGAGGTAGCCCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS-3UTR GCA 90 bp | GGGGGCTACCTCCCTGCCTGCAGTCCGTCAGTGTCCAACCCTGCCCTCCTAGAATGTCGCTGGGCTCGGTaGCCGCTGTACCACTACCCC | + |
|
Preference number: 4 (lower is better) Translates to: GGYLPACSPSVSNPALLECRWAR*PLYHYP Trigger: GGGGTAGTGGTACAGCGGGCACCGAGCCCAGCGACA...TTCTAGGAGGGCAGGGTTGGACACTGACGGACTGCAGGCAGGGAGGTAGCCCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS-3UTR CCA 90 bp | GCAGGGGTGTGGGGGAGAAGAGAGCGGCCGATCCAGGCCATGTGTCCTGTGGGGACCGCCACCTGCACCTaGGCCACTCTTCTCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AGVWGRRERPIQAMCPVGTATCT*ATLLFL Trigger: CAGGAAGAGAAGAGTGGCCCAGGTGCAGGTGGCGGT...CCCCACAGGACACATGGCCTGGATCGGCCGCTCTCTTCTCCCCCACACCCCTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS-3UTR TCA 90 bp | CCCTGGGAGTGCCTGCGAGGCACAGTTGAGTGGCAGTCTGTTAGCAGCCGTGCTCCACAAGCCACTTGCTaGGCCAACGCTGCCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PWECLRGTVEWQSVSSRAPQATC*ANAAQA Trigger: GGCCTGGGCAGCGTTGGCTCAGCAAGTGGCTTGTGG...AGCACGGCTGCTAACAGACTGCCACTCAACTGTGCCTCGCAGGCACTCCCAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS-3UTR GCA 90 bp | GGGGGCTACCTCCCTGCCTGCAGTCCGTCAGTGTCCAACCCTGCCCTCCTAGAAGCCCGCTGCTGTGTATaGTTGCGATGGCGCTTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GGYLPACSPSVSNPALLEARCCV*LRWRLR Trigger: CCGCAAGCGCCATCGCAAGCATACACAGCAGCGGGC...TTCTAGGAGGGCAGGGTTGGACACTGACGGACTGCAGGCAGGGAGGTAGCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS-3UTR TCA 90 bp | GGGCAGGGCCAGGGGGCTACCTCCCTGCCTGCAGTCCGTCAGTGTCCAACCCTGCCTGTGTGGCTGTCTTaGCAGTGTTGTCTGACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GQGQGATSLPAVRQCPTLPVWLS*QCCLTP Trigger: AGGAGTCAGACAACACTGTCAAGACAGCCACACAGG...CAGGGTTGGACACTGACGGACTGCAGGCAGGGAGGTAGCCCCCTGGCCCTGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS-3UTR TCA 90 bp | GGAGCTGGGGTCAAAGTGCACTGCAGGCTGGCCCAGCCCCAAGCAGCCTCTTCCCTTGACAGTGTTGTCTaGCTCCTTGCTTGGCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GAGVKVHCRLAQPQAASSLDSVV*LLAWPA Trigger: AGCCGGCCAAGCAAGGAGTCAGACAACACTGTCAAG...GGAAGAGGCTGCTTGGGGCTGGGCCAGCCTGCAGTGCACTTTGACCCCAGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS-3UTR GCA 90 bp | GGCAGTCTGTTAGCAGCCGTGCTGCCAAGGAGCTGGGGTCAAAGTGCACTGCAGAGGGCAGCCGCCCGCTaGTGTGTATGCTTGCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: GSLLAAVLPRSWGQSALQRAAAR*CVCLRW Trigger: CCATCGCAAGCATACACAGCAGCGGGCGGCTGCCCT...CTGCAGTGCACTTTGACCCCAGCTCCTTGGCAGCACGGCTGCTAACAGACTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| 3UTR CAA 72 bp | TTCCATGGCAGCCCTGGGAGTGCCTGCGAGGCACAGTaGAGTGGCAGTCTGTTAGCAGCCGTGCTGCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FHGSPGSACEAQ*SGSLLAAVLPR Trigger: CCTTGGCAGCACGGCTGCTAACAGACTGCCACTCAACTGTGCCTCGCAGGCACTCCCAGGGCTGCCATGGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS-3UTR TCA 90 bp | TGCTGCCAAGGAGCTGGGGTCAAAGTGCACTGCAGGCTGGCCCAGCCCCAAGCAGGCGCTTGCGGAGCTTaGGTAGTAGGACTGTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CCQGAGVKVHCRLAQPQAGACGA*VVGLSR Trigger: TCTTGACAGTCCTACTACTCAAGCTCCGCAAGCGCC...TGCTTGGGGCTGGGCCAGCCTGCAGTGCACTTTGACCCCAGCTCCTTGGCAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS-3UTR GCA 90 bp | GTTGAGTGGCAGTCTGTTAGCAGCCGTGCTGCCAAGGAGCTGGGGTCAAAGTGCGCCGGCGCCGACGGCTaGGAACAATGCTACCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VEWQSVSSRAAKELGSKCAGADG*EQCYLG Trigger: TCCAAGGTAGCATTGTTCGCAGCCGTCGGCGCCGGC...GCACTTTGACCCCAGCTCCTTGGCAGCACGGCTGCTAACAGACTGCCACTCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS-3UTR CCA 90 bp | GGGCAGGGCCAGGGGGCTACCTCCCTGCCTGCAGTCCGTCAGTGTCCAACCCTGGGGTGTCACAGCATTTaGATCTTGCCCAACCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GQGQGATSLPAVRQCPTLGCHSI*ILPNLH Trigger: ATGAAGGTTGGGCAAGATCCAAATGCTGTGACACCC...CAGGGTTGGACACTGACGGACTGCAGGCAGGGAGGTAGCCCCCTGGCCCTGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS-3UTR TCA 90 bp | GGAGCTGGGGTCAAAGTGCACTGCAGGCTGGCCCAGCCCCAAGCAGCCTCTTCCATGCTACCTTGGAGTTaGAGAAGCTGTCAGAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GAGVKVHCRLAQPQAASSMLPWS*RSCQSP Trigger: GGGACTCTGACAGCTTCTTCAACTCCAAGGTAGCAT...GGAAGAGGCTGCTTGGGGCTGGGCCAGCCTGCAGTGCACTTTGACCCCAGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS-3UTR CCA 90 bp | TGCTGCCAAGGAGCTGGGGTCAAAGTGCACTGCAGGCTGGCCCAGCCCCAAGCAGTGAAGCGGATTTCCTaGTGTGGCTTGTTGCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CCQGAGVKVHCRLAQPQAVKRIS*CGLLQV Trigger: CACTTGCAACAAGCCACACCAGGAAATCCGCTTCAC...TGCTTGGGGCTGGGCCAGCCTGCAGTGCACTTTGACCCCAGCTCCTTGGCAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS-3UTR TCA 90 bp | CTGCCCCAGGCCCTCTTAGACTGGGTCAGGCCAGGCTCAGAAAGCCTGGGAAGGGTGGCTTGTTGCAAGTaGCCAGTACATTGGGATCAA | + |
|
Preference number: 4 (lower is better) Translates to: LPQALLDWVRPGSESLGRVACCK*PVHWDQ Trigger: TTGATCCCAATGTACTGGTCACTTGCAACAAGCCAC...CCTTCCCAGGCTTTCTGAGCCTGGCCTGACCCAGTCTAAGAGGGCCTGGGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS-3UTR TCA 90 bp | CTGCCCCAGGCCCTCTTAGACTGGGTCAGGCCAGGCTCAGAAAGCCTGGGAAGGAATCGTGGTACTTTTTaGATTCCAGGCCCATGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPQALLDWVRPGSESLGRNRGTF*IPGPCS Trigger: ACTACATGGGCCTGGAATTCAAAAAGTACCACGATT...CCTTCCCAGGCTTTCTGAGCCTGGCCTGACCCAGTCTAAGAGGGCCTGGGGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| 3UTR CAA 72 bp | AGGGTGGTAGTCACTACCCCACTGCTAGGAACAGCATaGTCTCATGAGGGTCCAAAAAGGAGGGTGGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RVVVTTPLLGTA*SHEGPKRRVAL Trigger: GAGCGCCACCCTCCTTTTTGGACCCTCATGAGACAATGCTGTTCCTAGCAGTGGGGTAGTGACTACCACCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS-3UTR GCA 90 bp | ATTAAGACATTAATTACCGTGAGAGTGAAGGAGGCAGGAGATGCCCAAGAATCCCTGCAAGCAGCCGCCTaGTCTGGCCGCACCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: IKTLITVRVKEAGDAQESLQAAA*SGRTRY Trigger: GTACCTGGTGCGGCCAGAGCAGGCGGCTGCTTGCAG...GGATTCTTGGGCATCTCCTGCCTCCTTCACTCTCACGGTAATTAATGTCTTAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS-3UTR GCA 90 bp | GGCAGTCTGTTAGCAGCCGTGCTGCCAAGGAGCTGGGGTCAAAGTGCACTGCAGACAGCATTTGGATCTTaGCCAACCTTCATAACGATC | + |
|
Preference number: 4 (lower is better) Translates to: GSLLAAVLPRSWGQSALQTAFGS*PTFITI Trigger: GATCGTTATGAAGGTTGGGCAAGATCCAAATGCTGT...CTGCAGTGCACTTTGACCCCAGCTCCTTGGCAGCACGGCTGCTAACAGACTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS-3UTR CCA 90 bp | TTCCCCAGGCAACAGCCAATTAAGACATTAATTACCGTGAGAGTGAAGGAGGCAAGCAGCCGCCTGCTCTaGCCGCACCAGGTACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FPRQQPIKTLITVRVKEASSRLL*PHQVQL Trigger: AAGCTGTACCTGGTGCGGCCAGAGCAGGCGGCTGCT...TGCCTCCTTCACTCTCACGGTAATTAATGTCTTAATTGGCTGTTGCCTGGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS-3UTR GCA 90 bp | ATTAAGACATTAATTACCGTGAGAGTGAAGGAGGCAGGAGATGCCCAAGAATCCCGGCTGGTAGTCAACTaGTCGGGTGTCACAGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: IKTLITVRVKEAGDAQESRLVVN*SGVTAF Trigger: AAATGCTGTGACACCCGAGCAGTTGACTACCAGCCG...GGATTCTTGGGCATCTCCTGCCTCCTTCACTCTCACGGTAATTAATGTCTTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS-3UTR GCA 90 bp | ATTAAGACATTAATTACCGTGAGAGTGAAGGAGGCAGGAGATGCCCAAGAATCCGACGGCTGCGAACAATaGTACCTTGGAGTTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: IKTLITVRVKEAGDAQESDGCEQ*YLGVEE Trigger: TTCTTCAACTCCAAGGTAGCATTGTTCGCAGCCGTC...GGATTCTTGGGCATCTCCTGCCTCCTTCACTCTCACGGTAATTAATGTCTTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS-3UTR CAA 90 bp | GGCAGGGGTGTGGGGGAGAAGAGAGCGGCCGATCCAGGCCATGTGTCCTGTGGGACGGGCTCCAGGTTCTaGGCCAACGGCGTGGCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GRGVGEKRAADPGHVSCGTGSRF*ANGVAS Trigger: GCTTGCCACGCCGTTGGCCAAGAACCTGGAGCCCGT...CCCACAGGACACATGGCCTGGATCGGCCGCTCTCTTCTCCCCCACACCCCTGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS TCA 90 bp | CGGTGCCCGCTGTACCACTACCCCCTTTGGGGCTGGCTAGGGTACTaGGCGAGAGGGCAGCCGCCCGCTGCTGTGTATGCTTGCGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: RCPLYHYPLWGWLGY*ARGQPPAAVYACDG Trigger: GCCATCGCAAGCATACACAGCAGCGGGCGGCTGCCCTCTCGCTCAGTACCCTAGCCAGCCCCAAAGGGGGTAGTGGTACAGCGGGCACCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS-3UTR CAA 90 bp | GCAGGGGTGTGGGGGAGAAGAGAGCGGCCGATCCAGGCCATGTGTCCTGTGGGGCGCTGCTGTGTATGCTaGCGATGGCGCTTGCGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AGVWGRRERPIQAMCPVGRCCVC*RWRLRS Trigger: GCTCCGCAAGCGCCATCGCAAGCATACACAGCAGCG...CCCCACAGGACACATGGCCTGGATCGGCCGCTCTCTTCTCCCCCACACCCCTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS-3UTR CAA 90 bp | GGCAGGGGTGTGGGGGAGAAGAGAGCGGCCGATCCAGGCCATGTGTCCTGTGGGATAGCCACAAGCCACTaGCTGAGCCAACGCTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GRGVGEKRAADPGHVSCGIATSH*LSQRCP Trigger: TGGGCAGCGTTGGCTCAGCAAGTGGCTTGTGGCTAT...CCCACAGGACACATGGCCTGGATCGGCCGCTCTCTTCTCCCCCACACCCCTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS GCA 90 bp | CCTTTGGGGCTGGCTAGGGTACTGAGCGAGAGGGCAGCCGCCCGCTaGTGTGTATGCTTGCGATGGCGCTTGCGGAGCTTGAGTAGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: PLGLARVLSERAAAR*CVCLRWRLRSLSSR Trigger: CCTACTACTCAAGCTCCGCAAGCGCCATCGCAAGCATACACAGCAGCGGGCGGCTGCCCTCTCGCTCAGTACCCTAGCCAGCCCCAAAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS-3UTR CAA 90 bp | GGGCAGGGCCAGGGGGCTACCTCCCTGCCTGCAGTCCGTCAGTGTCCAACCCTGGCTGTCTTGACAGTGTaGTCTGACTCCTTGCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GQGQGATSLPAVRQCPTLAVLTV*SDSLLG Trigger: GCCAAGCAAGGAGTCAGACAACACTGTCAAGACAGC...CAGGGTTGGACACTGACGGACTGCAGGCAGGGAGGTAGCCCCCTGGCCCTGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS GCA 90 bp | CTGGCTAGGGTACTGAGCGAGAGGGCAGCCGCCCGCTGCTGTGTATaGTTGCGATGGCGCTTGCGGAGCTTGAGTAGTAGGACTGTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LARVLSERAAARCCV*LRWRLRSLSSRTVK Trigger: CTTGACAGTCCTACTACTCAAGCTCCGCAAGCGCCATCGCAAGCATACACAGCAGCGGGCGGCTGCCCTCTCGCTCAGTACCCTAGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS CCA 90 bp | CAGTACATTGGGATCAAGCACAGTGCTGCAAGCAGCCGCCTGCTCTaGCCGCACCAGGTACAGCTTGTAGTACTCGTAGGGCCGCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QYIGIKHSAASSRLL*PHQVQLVVLVGPPC Trigger: GCAGGGCGGCCCTACGAGTACTACAAGCTGTACCTGGTGCGGCCAGAGCAGGCGGCTGCTTGCAGCACTGTGCTTGATCCCAATGTACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS-3UTR CAA 90 bp | GGGCAGGGCCAGGGGGCTACCTCCCTGCCTGCAGTCCGTCAGTGTCCAACCCTGCTGAACTCTTGGAACTaGATGGTGAAGCGGATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GQGQGATSLPAVRQCPTLLNSWN*MVKRIS Trigger: GGAAATCCGCTTCACCATCAAGTTCCAAGAGTTCAG...CAGGGTTGGACACTGACGGACTGCAGGCAGGGAGGTAGCCCCCTGGCCCTGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS-3UTR CAA 90 bp | GGGGGCTACCTCCCTGCCTGCAGTCCGTCAGTGTCCAACCCTGCCCTCCTAGAAGCCTGTGTGGCTGTCTaGACAGTGTTGTCTGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: GGYLPACSPSVSNPALLEACVAV*TVLSDS Trigger: GGAGTCAGACAACACTGTCAAGACAGCCACACAGGC...TTCTAGGAGGGCAGGGTTGGACACTGACGGACTGCAGGCAGGGAGGTAGCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS-3UTR CAA 90 bp | TGCTGCCAAGGAGCTGGGGTCAAAGTGCACTGCAGGCTGGCCCAGCCCCAAGCATGGCGCTTGCGGAGCTaGAGTAGTAGGACTGTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: CCQGAGVKVHCRLAQPQAWRLRS*SSRTVK Trigger: CTTGACAGTCCTACTACTCAAGCTCCGCAAGCGCCA...TGCTTGGGGCTGGGCCAGCCTGCAGTGCACTTTGACCCCAGCTCCTTGGCAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS TCA 90 bp | GGATCCCCGACCAGGAGCCTGTGTGGCTGTCTTGACAGTGTTGTCTaGCTCCTTGCTTGGCCGGCTGGTAGTCAACTGCTCGGGTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: GSPTRSLCGCLDSVV*LLAWPAGSQLLGCH Trigger: GTGACACCCGAGCAGTTGACTACCAGCCGGCCAAGCAAGGAGTCAGACAACACTGTCAAGACAGCCACACAGGCTCCTGGTCGGGGATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS GCA 90 bp | CCGCACCAGGTACAGCTTGTAGTACTCGTAGGGCCGCCCTGCTTCTaGTCGGGGGCAGATGATGTCCAGCTTGTCTCCAATCTTCGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: PHQVQLVVLVGPPCF*SGADDVQLVSNLRV Trigger: TACCCGAAGATTGGAGACAAGCTGGACATCATCTGCCCCCGAGCAGAAGCAGGGCGGCCCTACGAGTACTACAAGCTGTACCTGGTGCGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS GCA 90 bp | CTCTGGCCGCACCAGGTACAGCTTGTAGTACTCGTAGGGCCGCCCTaGTTCTGCTCGGGGGCAGATGATGTCCAGCTTGTCTCCAATCTT | + |
|
Preference number: 5 (lower is better) Translates to: LWPHQVQLVVLVGPP*FCSGADDVQLVSNL Trigger: AAGATTGGAGACAAGCTGGACATCATCTGCCCCCGAGCAGAAGCAGGGCGGCCCTACGAGTACTACAAGCTGTACCTGGTGCGGCCAGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS TCA 90 bp | GCTTGTAGTACTCGTAGGGCCGCCCTGCTTCTGCTCGGGGGCAGATaGTGTCCAGCTTGTCTCCAATCTTCGGGTAGATCACCAAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: ACSTRRAALLLLGGR*CPACLQSSGRSPSP Trigger: AGGGCTTGGTGATCTACCCGAAGATTGGAGACAAGCTGGACATCATCTGCCCCCGAGCAGAAGCAGGGCGGCCCTACGAGTACTACAAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS-3UTR CAA 90 bp | CCCTGGGAGTGCCTGCGAGGCACAGTTGAGTGGCAGTCTGTTAGCAGCCGTGCTTCCTGGTGTGGCTTGTaGCAAGTGACCAGTACATTG | + |
|
Preference number: 5 (lower is better) Translates to: PWECLRGTVEWQSVSSRASWCGL*QVTSTL Trigger: CAATGTACTGGTCACTTGCAACAAGCCACACCAGGA...AGCACGGCTGCTAACAGACTGCCACTCAACTGTGCCTCGCAGGCACTCCCAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS CCA 90 bp | TTCTCTTCCTGGTTCACAGTCTCATGCTTGCCGTCAGAGTCACCCTaGGATCCCCGACCAGGAGCCTGTGTGGCTGTCTTGACAGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FSSWFTVSCLPSESP*DPRPGACVAVLTVL Trigger: CAACACTGTCAAGACAGCCACACAGGCTCCTGGTCGGGGATCCCAGGGTGACTCTGACGGCAAGCATGAGACTGTGAACCAGGAAGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS GCA 90 bp | GAAGATGATGATGAGCAGGAAGATGACACAGCCGGCGCCGACGGCTaGGAACAATGCTACCTTGGAGTTGAAGAAGCTGTCAGAGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: EDDDEQEDDTAGADG*EQCYLGVEEAVRVP Trigger: GGGGACTCTGACAGCTTCTTCAACTCCAAGGTAGCATTGTTCGCAGCCGTCGGCGCCGGCTGTGTCATCTTCCTGCTCATCATCATCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS-3UTR CAA 90 bp | TTGAGTGGCAGTCTGTTAGCAGCCGTGCTGCCAAGGAGCTGGGGTCAAAGTGCAAATGCTACCTTGGAGTaGAAGAAGCTGTCAGAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSGSLLAAVLPRSWGQSANATLE*KKLSES Trigger: GGACTCTGACAGCTTCTTCAACTCCAAGGTAGCATT...TGCACTTTGACCCCAGCTCCTTGGCAGCACGGCTGCTAACAGACTGCCACTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS GCA 90 bp | TTGACAGTGTTGTCTGACTCCTTGCTTGGCCGGCTGGTAGTCAACTaGTCGGGTGTCACAGCATTTGGATCTTGCCCAACCTTCATAACG | + |
|
Preference number: 5 (lower is better) Translates to: LTVLSDSLLGRLVVN*SGVTAFGSCPTFIT Trigger: CGTTATGAAGGTTGGGCAAGATCCAAATGCTGTGACACCCGAGCAGTTGACTACCAGCCGGCCAAGCAAGGAGTCAGACAACACTGTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS-3UTR CAA 90 bp | AGCATTAAAAACAGTGATGATAGTGGACGAGCAGTCCTGGGGATGGGTGAAGGGGCGAACAATGCTACCTaGGAGTTGAAGAAGCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SIKNSDDSGRAVLGMGEGANNAT*ELKKLS Trigger: TGACAGCTTCTTCAACTCCAAGGTAGCATTGTTCGC...CCCTTCACCCATCCCCAGGACTGCTCGTCCACTATCATCACTGTTTTTAATGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS CAA 90 bp | ATGATGATGTCGCTGGGCTCGGTGCCCGCTGTACCACTACCCCCTTaGGGGCTGGCTAGGGTACTGAGCGAGAGGGCAGCCGCCCGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: MMMSLGSVPAVPLPP*GLARVLSERAAARC Trigger: GCAGCGGGCGGCTGCCCTCTCGCTCAGTACCCTAGCCAGCCCCAAAGGGGGTAGTGGTACAGCGGGCACCGAGCCCAGCGACATCATCAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS GCA 72 bp | CTGGCTAGGGTACTGAGCGAGAGGGCAGCCGCCCGCTaGTGTGTATGCTTGCGATGGCGCTTGCGGAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LARVLSERAAAR*CVCLRWRLRSL Trigger: CAAGCTCCGCAAGCGCCATCGCAAGCATACACAGCAGCGGGCGGCTGCCCTCTCGCTCAGTACCCTAGCCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS CAA 72 bp | GGGTTAAGAGAGCTCCAGGACACGGGCTCCAGGTTCTaGGCCAACGGCGTGGCAAGCCGGCACAGCGTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GLRELQDTGSRF*ANGVASRHSVS Trigger: GCTGACGCTGTGCCGGCTTGCCACGCCGTTGGCCAAGAACCTGGAGCCCGTGTCCTGGAGCTCTCTTAACCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS TCA 72 bp | CCTGGGATCCCCGACCAGGAGCCTGTGTGGCTGTCTTaGCAGTGTTGTCTGACTCCTTGCTTGGCCGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PGIPDQEPVWLS*QCCLTPCLAGW Trigger: CCAGCCGGCCAAGCAAGGAGTCAGACAACACTGTCAAGACAGCCACACAGGCTCCTGGTCGGGGATCCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS GCA 72 bp | GTACTGAGCGAGAGGGCAGCCGCCCGCTGCTGTGTATaGTTGCGATGGCGCTTGCGGAGCTTGAGTAGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: VLSERAAARCCV*LRWRLRSLSSR Trigger: CCTACTACTCAAGCTCCGCAAGCGCCATCGCAAGCATACACAGCAGCGGGCGGCTGCCCTCTCGCTCAGTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS CAA 72 bp | CCCTGGGATCCCCGACCAGGAGCCTGTGTGGCTGTCTaGACAGTGTTGTCTGACTCCTTGCTTGGCCGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PWDPRPGACVAV*TVLSDSLLGRL Trigger: CAGCCGGCCAAGCAAGGAGTCAGACAACACTGTCAAGACAGCCACACAGGCTCCTGGTCGGGGATCCCAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS CAA 90 bp | CCCTGGGATCCCCGACCAGGAGCCTGTGTGGCTGTCTTGACAGTGTaGTCTGACTCCTTGCTTGGCCGGCTGGTAGTCAACTGCTCGGGT | + |
|
Preference number: 6 (lower is better) Translates to: PWDPRPGACVAVLTV*SDSLLGRLVVNCSG Trigger: ACCCGAGCAGTTGACTACCAGCCGGCCAAGCAAGGAGTCAGACAACACTGTCAAGACAGCCACACAGGCTCCTGGTCGGGGATCCCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS CCA 72 bp | GGGATCAAGCACAGTGCTGCAAGCAGCCGCCTGCTCTaGCCGCACCAGGTACAGCTTGTAGTACTCGTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GIKHSAASSRLL*PHQVQLVVLVG Trigger: CCCTACGAGTACTACAAGCTGTACCTGGTGCGGCCAGAGCAGGCGGCTGCTTGCAGCACTGTGCTTGATCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS CCA 72 bp | GAGAGGGCAGCCGCCCGCTGCTGTGTATGCTTGCGATaGCGCTTGCGGAGCTTGAGTAGTAGGACTGTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: ERAAARCCVCLR*RLRSLSSRTVK Trigger: CTTGACAGTCCTACTACTCAAGCTCCGCAAGCGCCATCGCAAGCATACACAGCAGCGGGCGGCTGCCCTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS CAA 72 bp | ACACAGCCGGCGCCGACGGCTGCGAACAATGCTACCTaGGAGTTGAAGAAGCTGTCAGAGTCCCCGCTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: TQPAPTAANNAT*ELKKLSESPLP Trigger: TGGCAGCGGGGACTCTGACAGCTTCTTCAACTCCAAGGTAGCATTGTTCGCAGCCGTCGGCGCCGGCTGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS CAA 90 bp | AGGAACTTAGGGTTAAGAGAGCTCCAGGACACGGGCTCCAGGTTCTaGGCCAACGGCGTGGCAAGCCGGCACAGCGTCAGCACGACCATA | + |
|
Preference number: 6 (lower is better) Translates to: RNLGLRELQDTGSRF*ANGVASRHSVSTTI Trigger: TATGGTCGTGCTGACGCTGTGCCGGCTTGCCACGCCGTTGGCCAAGAACCTGGAGCCCGTGTCCTGGAGCTCTCTTAACCCTAAGTTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS GCA 72 bp | CACCAGGTACAGCTTGTAGTACTCGTAGGGCCGCCCTaGTTCTGCTCGGGGGCAGATGATGTCCAGCTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: HQVQLVVLVGPP*FCSGADDVQLV Trigger: GACAAGCTGGACATCATCTGCCCCCGAGCAGAAGCAGGGCGGCCCTACGAGTACTACAAGCTGTACCTGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS CCA 72 bp | TGGTTCACAGTCTCATGCTTGCCGTCAGAGTCACCCTaGGATCCCCGACCAGGAGCCTGTGTGGCTGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: WFTVSCLPSESP*DPRPGACVAVL Trigger: CAAGACAGCCACACAGGCTCCTGGTCGGGGATCCCAGGGTGACTCTGACGGCAAGCATGAGACTGTGAACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS CAA 72 bp | CCCCGACCAGGAGCCTGTGTGGCTGTCTTGACAGTGTaGTCTGACTCCTTGCTTGGCCGGCTGGTAGTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: PRPGACVAVLTV*SDSLLGRLVVN Trigger: GTTGACTACCAGCCGGCCAAGCAAGGAGTCAGACAACACTGTCAAGACAGCCACACAGGCTCCTGGTCGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS CAA 90 bp | TCAGAGTCACCCTGGGATCCCCGACCAGGAGCCTGTGTGGCTGTCTaGACAGTGTTGTCTGACTCCTTGCTTGGCCGGCTGGTAGTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: SESPWDPRPGACVAV*TVLSDSLLGRLVVN Trigger: GTTGACTACCAGCCGGCCAAGCAAGGAGTCAGACAACACTGTCAAGACAGCCACACAGGCTCCTGGTCGGGGATCCCAGGGTGACTCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS TCA 72 bp | ACTCGTAGGGCCGCCCTGCTTCTGCTCGGGGGCAGATaGTGTCCAGCTTGTCTCCAATCTTCGGGTAGATCA | + |
|
Preference number: 6 (lower is better) Translates to: TRRAALLLLGGR*CPACLQSSGRS Trigger: TGATCTACCCGAAGATTGGAGACAAGCTGGACATCATCTGCCCCCGAGCAGAAGCAGGGCGGCCCTACGAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS GCA 72 bp | GAAGATGACACAGCCGGCGCCGACGGCTGCGAACAATaGTACCTTGGAGTTGAAGAAGCTGTCAGAGTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: EDDTAGADGCEQ*YLGVEEAVRVP Trigger: GGGGACTCTGACAGCTTCTTCAACTCCAAGGTAGCATTGTTCGCAGCCGTCGGCGCCGGCTGTGTCATCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS CAA 72 bp | GCCTGTGTGGCTGTCTTGACAGTGTTGTCTGACTCCTaGCTTGGCCGGCTGGTAGTCAACTGCTCGGGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: ACVAVLTVLSDS*LGRLVVNCSGV Trigger: GACACCCGAGCAGTTGACTACCAGCCGGCCAAGCAAGGAGTCAGACAACACTGTCAAGACAGCCACACAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS CAA 72 bp | GCAGCCGCCCGCTGCTGTGTATGCTTGCGATGGCGCTaGCGGAGCTTGAGTAGTAGGACTGTCAAGAAGATG | + |
|
Preference number: 6 (lower is better) Translates to: AAARCCVCLRWR*RSLSSRTVKKM Trigger: CATCTTCTTGACAGTCCTACTACTCAAGCTCCGCAAGCGCCATCGCAAGCATACACAGCAGCGGGCGGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS CAA 90 bp | CGACCAGGAGCCTGTGTGGCTGTCTTGACAGTGTTGTCTGACTCCTaGCTTGGCCGGCTGGTAGTCAACTGCTCGGGTGTCACAGCATTT | + |
|
Preference number: 6 (lower is better) Translates to: RPGACVAVLTVLSDS*LGRLVVNCSGVTAF Trigger: AAATGCTGTGACACCCGAGCAGTTGACTACCAGCCGGCCAAGCAAGGAGTCAGACAACACTGTCAAGACAGCCACACAGGCTCCTGGTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS TCA 72 bp | ACCAGGAGCCTGTGTGGCTGTCTTGACAGTGTTGTCTaGCTCCTTGCTTGGCCGGCTGGTAGTCAACTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: TRSLCGCLDSVV*LLAWPAGSQLL Trigger: GAGCAGTTGACTACCAGCCGGCCAAGCAAGGAGTCAGACAACACTGTCAAGACAGCCACACAGGCTCCTGGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS GCA 72 bp | GTACAGCTTGTAGTACTCGTAGGGCCGCCCTGCTTCTaGTCGGGGGCAGATGATGTCCAGCTTGTCTCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: VQLVVLVGPPCF*SGADDVQLVSN Trigger: ATTGGAGACAAGCTGGACATCATCTGCCCCCGAGCAGAAGCAGGGCGGCCCTACGAGTACTACAAGCTGTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS GCA 72 bp | GATGAGCAGGAAGATGACACAGCCGGCGCCGACGGCTaGGAACAATGCTACCTTGGAGTTGAAGAAGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: DEQEDDTAGADG*EQCYLGVEEAV Trigger: GACAGCTTCTTCAACTCCAAGGTAGCATTGTTCGCAGCCGTCGGCGCCGGCTGTGTCATCTTCCTGCTCATC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS CAA 90 bp | GCAGCCGCCCGCTGCTGTGTATGCTTGCGATGGCGCTTGCGGAGCTaGAGTAGTAGGACTGTCAAGAAGATGATGATGAGCAGGAAGATG | + |
|
Preference number: 6 (lower is better) Translates to: AAARCCVCLRWRLRS*SSRTVKKMMMSRKM Trigger: CATCTTCCTGCTCATCATCATCTTCTTGACAGTCCTACTACTCAAGCTCCGCAAGCGCCATCGCAAGCATACACAGCAGCGGGCGGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS GCA 72 bp | TTGTCTGACTCCTTGCTTGGCCGGCTGGTAGTCAACTaGTCGGGTGTCACAGCATTTGGATCTTGCCCAACC | + |
|
Preference number: 6 (lower is better) Translates to: LSDSLLGRLVVN*SGVTAFGSCPT Trigger: GGTTGGGCAAGATCCAAATGCTGTGACACCCGAGCAGTTGACTACCAGCCGGCCAAGCAAGGAGTCAGACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS CAA 72 bp | ATTTCCTGGTGTGGCTTGTTGCAAGTGACCAGTACATaGGGATCAAGCACAGTGCTGCAAGCAGCCGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ISWCGLLQVTST*GSSTVLQAAAC Trigger: GCAGGCGGCTGCTTGCAGCACTGTGCTTGATCCCAATGTACTGGTCACTTGCAACAAGCCACACCAGGAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||
| CDS CAA 72 bp | CGCTGCTGTGTATGCTTGCGATGGCGCTTGCGGAGCTaGAGTAGTAGGACTGTCAAGAAGATGATGATGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RCCVCLRWRLRS*SSRTVKKMMMS Trigger: GCTCATCATCATCTTCTTGACAGTCCTACTACTCAAGCTCCGCAAGCGCCATCGCAAGCATACACAGCAGCG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052839.7 |
||