Pregenerated sensors for EFNA4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028040Ensembl transcript IDs: ENSMUST00000029674.8
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATGCTATGTTCCTGGGCGCCCCCGGACTGTCGGACTGTCGGCAGCTaGCTTACAGGTCCCTCTTCAGCCTGTGGTGAGGGGGCAGTCACC | + |
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Preference number: 1 (lower is better) Translates to: MLCSWAPPDCRTVGS*LTGPSSACGEGAVT Trigger: GGTGACTGCCCCCTCACCACAGGCTGAAGAGGGACCTGTAAGGCAGCTGCCGACAGTCCGACAGTCCGGGGGCGCCCAGGAACATAGCAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR CCA 90 bp | GAGTGGCCCCCAGGAAGGGGCAACAATTGCTCCTGGGAAGAGGCCTaGAGGGCACAGGCGCCATGGCTTCTCCTTTGCTTCTTGGCCAGG | + |
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Preference number: 1 (lower is better) Translates to: EWPPGRGNNCSWEEA*RAQAPWLLLCFLAR Trigger: CCTGGCCAAGAAGCAAAGGAGAAGCCATGGCGCCTGTGCCCTCCAGGCCTCTTCCCAGGAGCAATTGTTGCCCCTTCCTGGGGGCCACTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR CCA 90 bp | CAGAAGACAAGCGAGTGGCCCCCAGGAAGGGGCAACAATTGCTCCTaGGAAGAGGCCTGGAGGGCACAGGCGCCATGGCTTCTCCTTTGC | + |
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Preference number: 1 (lower is better) Translates to: QKTSEWPPGRGNNCS*EEAWRAQAPWLLLC Trigger: GCAAAGGAGAAGCCATGGCGCCTGTGCCCTCCAGGCCTCTTCCCAGGAGCAATTGTTGCCCCTTCCTGGGGGCCACTCGCTTGTCTTCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR GCA 90 bp | TCCTGGGAAGAGGCCTGGAGGGCACAGGCGCCATGGCTTCTCCTTTaGTTCTTGGCCAGGAACCCACCTGTTCCCAGGTCTTTGGCTTGG | + |
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Preference number: 1 (lower is better) Translates to: SWEEAWRAQAPWLLL*FLARNPPVPRSLAW Trigger: CCAAGCCAAAGACCTGGGAACAGGTGGGTTCCTGGCCAAGAAGCAAAGGAGAAGCCATGGCGCCTGTGCCCTCCAGGCCTCTTCCCAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR CCA 90 bp | GGCAACAATTGCTCCTGGGAAGAGGCCTGGAGGGCACAGGCGCCATaGCTTCTCCTTTGCTTCTTGGCCAGGAACCCACCTGTTCCCAGG | + |
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Preference number: 1 (lower is better) Translates to: GNNCSWEEAWRAQAP*LLLCFLARNPPVPR Trigger: CCTGGGAACAGGTGGGTTCCTGGCCAAGAAGCAAAGGAGAAGCCATGGCGCCTGTGCCCTCCAGGCCTCTTCCCAGGAGCAATTGTTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR GCA 90 bp | ATCCCAGTCTTCCAGGGGGAGGAGACAAGACCATCAAAGCAGCTATaGTATGTTCCTGGGCGCCCCCGGACTGTCGGACTGTCGGCAGCT | + |
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Preference number: 1 (lower is better) Translates to: IPVFQGEETRPSKQL*YVPGRPRTVGLSAA Trigger: AGCTGCCGACAGTCCGACAGTCCGGGGGCGCCCAGGAACATAGCATAGCTGCTTTGATGGTCTTGTCTCCTCCCCCTGGAAGACTGGGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR CCA 90 bp | CACATCAAAGTTTCATCCTGTCTGCCTGGTTTGGCATCGCCTGTATaGTGGCAGGAACCCCTTCCACAGAGGCTCTTGACAAGGGCTGCG | + |
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Preference number: 1 (lower is better) Translates to: HIKVSSCLPGLASPV*WQEPLPQRLLTRAA Trigger: CGCAGCCCTTGTCAAGAGCCTCTGTGGAAGGGGTTCCTGCCACCATACAGGCGATGCCAAACCAGGCAGACAGGATGAAACTTTGATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR CCA 90 bp | CAGGTCTTTGGCTTGGGCCCTCAGTGTCTCAAGGAGTTGATCCCCTaGAATCCCAGTCTTCCAGGGGGAGGAGACAAGACCATCAAAGCA | + |
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Preference number: 1 (lower is better) Translates to: QVFGLGPQCLKELIP*NPSLPGGGDKTIKA Trigger: TGCTTTGATGGTCTTGTCTCCTCCCCCTGGAAGACTGGGATTCCAGGGGATCAACTCCTTGAGACACTGAGGGCCCAAGCCAAAGACCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR CCA 90 bp | AAATTCAACCTCATGGCAAGTCCGTCTTCACAGAAGACAAGCGAGTaGCCCCCAGGAAGGGGCAACAATTGCTCCTGGGAAGAGGCCTGG | + |
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Preference number: 1 (lower is better) Translates to: KFNLMASPSSQKTSE*PPGRGNNCSWEEAW Trigger: CCAGGCCTCTTCCCAGGAGCAATTGTTGCCCCTTCCTGGGGGCCACTCGCTTGTCTTCTGTGAAGACGGACTTGCCATGAGGTTGAATTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR CCA 90 bp | TCTCTCTCTTCACAGTGTGGGTTCCAGGGATTGACCTCGCTCAGGTaGTCAAGGCTCTGTGGTGAGCTCACACTTTCACCTGCTGAGCCT | + |
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Preference number: 1 (lower is better) Translates to: SLSSQCGFQGLTSLR*SRLCGELTLSPAEP Trigger: AGGCTCAGCAGGTGAAAGTGTGAGCTCACCACAGAGCCTTGACCACCTGAGCGAGGTCAATCCCTGGAACCCACACTGTGAAGAGAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR CCA 90 bp | ATCAAAGTTTCATCCTGTCTGCCTGGTTTGGCATCGCCTGTATGGTaGCAGGAACCCCTTCCACAGAGGCTCTTGACAAGGGCTGCGGTT | + |
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Preference number: 1 (lower is better) Translates to: IKVSSCLPGLASPVW*QEPLPQRLLTRAAV Trigger: AACCGCAGCCCTTGTCAAGAGCCTCTGTGGAAGGGGTTCCTGCCACCATACAGGCGATGCCAAACCAGGCAGACAGGATGAAACTTTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR-3UTR TCA 90 bp | GCGAGTGGCCCCCAGGAAGGGGCAACAATTGCTCCTGGGAAGAGGCCTGGAGGGTGCGGTTCCTTGGGGTaGCTTGGAAGGTGTGCTTGG | + |
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Preference number: 2 (lower is better) Translates to: ASGPQEGATIAPGKRPGGCGSLG*LGRCAW Trigger: CCAAGCACACCTTCCAAGTCACCCCAAGGAACCGCA...CCCTCCAGGCCTCTTCCCAGGAGCAATTGTTGCCCCTTCCTGGGGGCCACTCGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR-3UTR CCA 90 bp | GGTCAAGGCTCTGTGGTGAGCTCACACTTTCACCTGCTGAGCCTGCTCACTGCTCAGAAGACAAGCGAGTaGCCCCCAGGAAGGGGCAAC | + |
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Preference number: 2 (lower is better) Translates to: GQGSVVSSHFHLLSLLTAQKTSE*PPGRGN Trigger: GTTGCCCCTTCCTGGGGGCCACTCGCTTGTCTTCTG...AGCAGTGAGCAGGCTCAGCAGGTGAAAGTGTGAGCTCACCACAGAGCCTTGACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR CAA 90 bp | TTGGCATCGCCTGTATGGTGGCAGGAACCCCTTCCACAGAGGCTCTaGACAAGGGCTGCGGTTCCTTGGGGTGACTTGGAAGGTGTGCTT | + |
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Preference number: 2 (lower is better) Translates to: LASPVWWQEPLPQRL*TRAAVPWGDLEGVL Trigger: AAGCACACCTTCCAAGTCACCCCAAGGAACCGCAGCCCTTGTCAAGAGCCTCTGTGGAAGGGGTTCCTGCCACCATACAGGCGATGCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR-3UTR CCA 90 bp | CACAGAAGACAAGCGAGTGGCCCCCAGGAAGGGGCAACAATTGCTCCTGGGAAGAAGGAGTTGATCCCCTaGAATCCCAGTCTTCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: HRRQASGPQEGATIAPGKKELIP*NPSLPG Trigger: CCCTGGAAGACTGGGATTCCAGGGGATCAACTCCTT...CTTCCCAGGAGCAATTGTTGCCCCTTCCTGGGGGCCACTCGCTTGTCTTCTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR CAA 90 bp | GTGAGGGGGCAGTCACCTACAAGGGTCACCTCAGATCCTCCGACTTaGCACATCAAAGTTTCATCCTGTCTGCCTGGTTTGGCATCGCCT | + |
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Preference number: 2 (lower is better) Translates to: VRGQSPTRVTSDPPT*HIKVSSCLPGLASP Trigger: AGGCGATGCCAAACCAGGCAGACAGGATGAAACTTTGATGTGCAAAGTCGGAGGATCTGAGGTGACCCTTGTAGGTGACTGCCCCCTCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGGCAACAATTGCTCCTGGGAAGAGGCCTGGAGGGCACAGGCGCCATGGCTTCAGATCCTCCGACTTTaGACATCAAAGTTTCATCCT | + |
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Preference number: 2 (lower is better) Translates to: RGNNCSWEEAWRAQAPWLQILRL*TSKFHP Trigger: AGGATGAAACTTTGATGTGCAAAGTCGGAGGATCTG...AAGCCATGGCGCCTGTGCCCTCCAGGCCTCTTCCCAGGAGCAATTGTTGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR-3UTR GCA 90 bp | ACACTTTCACCTGCTGAGCCTGCTCACTGCTCTCCAAGGTGGTGGTTTGCTTTGCCCTCACCCTCCCAGTaGTGGAATTACAGGTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: TLSPAEPAHCSPRWWFALPSPSQ*WNYRCE Trigger: CTCACACCTGTAATTCCAGCACTGGGAGGGTGAGGG...CAAAGCAAACCACCACCTTGGAGAGCAGTGAGCAGGCTCAGCAGGTGAAAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR-3UTR TCA 90 bp | CCTACAAGGGTCACCTCAGATCCTCCGACTTTGCACATCAAAGTTTCATCCTGTTTCCACAGAGGCTCTTaGCAAGGGCTGCGGTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: PTRVTSDPPTLHIKVSSCFHRGS*QGLRFL Trigger: AAGGAACCGCAGCCCTTGTCAAGAGCCTCTGTGGAA...ACAGGATGAAACTTTGATGTGCAAAGTCGGAGGATCTGAGGTGACCCTTGTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR GCA 72 bp | TCCTGGGCGCCCCCGGACTGTCGGACTGTCGGCAGCTaGCTTACAGGTCCCTCTTCAGCCTGTGGTGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: SWAPPDCRTVGS*LTGPSSACGEG Trigger: CCCCTCACCACAGGCTGAAGAGGGACCTGTAAGGCAGCTGCCGACAGTCCGACAGTCCGGGGGCGCCCAGGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR CCA 72 bp | AGCGAGTGGCCCCCAGGAAGGGGCAACAATTGCTCCTaGGAAGAGGCCTGGAGGGCACAGGCGCCATGGCTT | + |
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Preference number: 3 (lower is better) Translates to: SEWPPGRGNNCS*EEAWRAQAPWL Trigger: AAGCCATGGCGCCTGTGCCCTCCAGGCCTCTTCCCAGGAGCAATTGTTGCCCCTTCCTGGGGGCCACTCGCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR GCA 72 bp | AAGACAAGCGAGTGGCCCCCAGGAAGGGGCAACAATTaGTCCTGGGAAGAGGCCTGGAGGGCACAGGCGCCA | + |
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Preference number: 3 (lower is better) Translates to: KTSEWPPGRGNN*SWEEAWRAQAP Trigger: TGGCGCCTGTGCCCTCCAGGCCTCTTCCCAGGAGCAATTGTTGCCCCTTCCTGGGGGCCACTCGCTTGTCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR GCA 72 bp | GAGGCCTGGAGGGCACAGGCGCCATGGCTTCTCCTTTaGTTCTTGGCCAGGAACCCACCTGTTCCCAGGTCT | + |
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Preference number: 3 (lower is better) Translates to: EAWRAQAPWLLL*FLARNPPVPRS Trigger: AGACCTGGGAACAGGTGGGTTCCTGGCCAAGAAGCAAAGGAGAAGCCATGGCGCCTGTGCCCTCCAGGCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR CCA 72 bp | TGCTCCTGGGAAGAGGCCTGGAGGGCACAGGCGCCATaGCTTCTCCTTTGCTTCTTGGCCAGGAACCCACCT | + |
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Preference number: 3 (lower is better) Translates to: CSWEEAWRAQAP*LLLCFLARNPP Trigger: AGGTGGGTTCCTGGCCAAGAAGCAAAGGAGAAGCCATGGCGCCTGTGCCCTCCAGGCCTCTTCCCAGGAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR-3UTR CAA 90 bp | AACAATTGCTCCTGGGAAGAGGCCTGGAGGGCACAGGCGCCATGGCTTCTCCTTCTTCCACAGAGGCTCTaGACAAGGGCTGCGGTTCCT | + |
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Preference number: 3 (lower is better) Translates to: NNCSWEEAWRAQAPWLLLLPQRL*TRAAVP Trigger: AGGAACCGCAGCCCTTGTCAAGAGCCTCTGTGGAAG...AAGGAGAAGCCATGGCGCCTGTGCCCTCCAGGCCTCTTCCCAGGAGCAATTGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR TCA 72 bp | CTGTATGGTGGCAGGAACCCCTTCCACAGAGGCTCTTaGCAAGGGCTGCGGTTCCTTGGGGTGACTTGGAAG | + |
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Preference number: 3 (lower is better) Translates to: LYGGRNPFHRGS*QGLRFLGVTWK Trigger: CTTCCAAGTCACCCCAAGGAACCGCAGCCCTTGTCAAGAGCCTCTGTGGAAGGGGTTCCTGCCACCATACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR TCA 72 bp | AGGTCTTTGGCTTGGGCCCTCAGTGTCTCAAGGAGTTaGTCCCCTGGAATCCCAGTCTTCCAGGGGGAGGAG | + |
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Preference number: 3 (lower is better) Translates to: RSLAWALSVSRS*SPGIPVFQGEE Trigger: CTCCTCCCCCTGGAAGACTGGGATTCCAGGGGATCAACTCCTTGAGACACTGAGGGCCCAAGCCAAAGACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR CCA 72 bp | GCTTCTTGGCCAGGAACCCACCTGTTCCCAGGTCTTTaGCTTGGGCCCTCAGTGTCTCAAGGAGTTGATCCC | + |
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Preference number: 3 (lower is better) Translates to: ASWPGTHLFPGL*LGPSVSQGVDP Trigger: GGGATCAACTCCTTGAGACACTGAGGGCCCAAGCCAAAGACCTGGGAACAGGTGGGTTCCTGGCCAAGAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR CCA 72 bp | CTCATGGCAAGTCCGTCTTCACAGAAGACAAGCGAGTaGCCCCCAGGAAGGGGCAACAATTGCTCCTGGGAA | + |
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Preference number: 3 (lower is better) Translates to: LMASPSSQKTSE*PPGRGNNCSWE Trigger: TTCCCAGGAGCAATTGTTGCCCCTTCCTGGGGGCCACTCGCTTGTCTTCTGTGAAGACGGACTTGCCATGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR-3UTR CAA 90 bp | AGGGGCAACAATTGCTCCTGGGAAGAGGCCTGGAGGGCACAGGCGCCATGGCTTTCAGATCCTCCGACTTaGCACATCAAAGTTTCATCC | + |
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Preference number: 3 (lower is better) Translates to: RGNNCSWEEAWRAQAPWLSDPPT*HIKVSS Trigger: GGATGAAACTTTGATGTGCAAAGTCGGAGGATCTGA...AAGCCATGGCGCCTGTGCCCTCCAGGCCTCTTCCCAGGAGCAATTGTTGCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR CCA 72 bp | GTTTCATCCTGTCTGCCTGGTTTGGCATCGCCTGTATaGTGGCAGGAACCCCTTCCACAGAGGCTCTTGACA | + |
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Preference number: 3 (lower is better) Translates to: VSSCLPGLASPV*WQEPLPQRLLT Trigger: TGTCAAGAGCCTCTGTGGAAGGGGTTCCTGCCACCATACAGGCGATGCCAAACCAGGCAGACAGGATGAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR CCA 72 bp | TCACAGTGTGGGTTCCAGGGATTGACCTCGCTCAGGTaGTCAAGGCTCTGTGGTGAGCTCACACTTTCACCT | + |
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Preference number: 3 (lower is better) Translates to: SQCGFQGLTSLR*SRLCGELTLSP Trigger: AGGTGAAAGTGTGAGCTCACCACAGAGCCTTGACCACCTGAGCGAGGTCAATCCCTGGAACCCACACTGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR CCA 72 bp | TCCGACTTTGCACATCAAAGTTTCATCCTGTCTGCCTaGTTTGGCATCGCCTGTATGGTGGCAGGAACCCCT | + |
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Preference number: 3 (lower is better) Translates to: SDFAHQSFILSA*FGIACMVAGTP Trigger: AGGGGTTCCTGCCACCATACAGGCGATGCCAAACCAGGCAGACAGGATGAAACTTTGATGTGCAAAGTCGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR GCA 72 bp | GGTGAGCTCACACTTTCACCTGCTGAGCCTGCTCACTaGTCTCCAAGGTGGTGGTTTGCTTTGTTCTTGTTT | + |
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Preference number: 3 (lower is better) Translates to: GELTLSPAEPAH*SPRWWFALFLF Trigger: AAACAAGAACAAAGCAAACCACCACCTTGGAGAGCAGTGAGCAGGCTCAGCAGGTGAAAGTGTGAGCTCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR CCA 72 bp | ACAACTTTTTGGGGTGTGTTCTCTCTCTTCACAGTGTaGGTTCCAGGGATTGACCTCGCTCAGGTGGTCAAG | + |
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Preference number: 3 (lower is better) Translates to: TTFWGVFSLFTV*VPGIDLAQVVK Trigger: CTTGACCACCTGAGCGAGGTCAATCCCTGGAACCCACACTGTGAAGAGAGAGAACACACCCCAAAAAGTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR GCA 72 bp | AGTCACCTACAAGGGTCACCTCAGATCCTCCGACTTTaGACATCAAAGTTTCATCCTGTCTGCCTGGTTTGG | + |
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Preference number: 3 (lower is better) Translates to: SHLQGSPQILRL*TSKFHPVCLVW Trigger: CCAAACCAGGCAGACAGGATGAAACTTTGATGTGCAAAGTCGGAGGATCTGAGGTGACCCTTGTAGGTGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR CAA 72 bp | GAAGACAAGCGAGTGGCCCCCAGGAAGGGGCAACAATaGCTCCTGGGAAGAGGCCTGGAGGGCACAGGCGCC | + |
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Preference number: 4 (lower is better) Translates to: EDKRVAPRKGQQ*LLGRGLEGTGA Trigger: GGCGCCTGTGCCCTCCAGGCCTCTTCCCAGGAGCAATTGTTGCCCCTTCCTGGGGGCCACTCGCTTGTCTTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| CDS-3UTR GCA 90 bp | GGTCAAGGCTCTGTGGTGAGCTCACACTTTCACCTGCTGAGCCTGCTCACTGCTGGCATTTGCCCCCTCTaGCGTGCAGGCCTCGTAGCC | + |
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Preference number: 4 (lower is better) Translates to: GQGSVVSSHFHLLSLLTAGICPL*RAGLVA Trigger: GGCTACGAGGCCTGCACGGCAGAGGGGGCAAATGCC...AGCAGTGAGCAGGCTCAGCAGGTGAAAGTGTGAGCTCACCACAGAGCCTTGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| CDS-3UTR CCA 90 bp | ATCGCCTGTATGGTGGCAGGAACCCCTTCCACAGAGGCTCTTGACAAGGGCTGCGGAGTTCCAGTAGATTaGGTGGCGGAGGCTGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: IACMVAGTPSTEALDKGCGVPVD*VAEAGA Trigger: TGCTCCAGCCTCCGCCACCCAATCTACTGGAACTCC...GCAGCCCTTGTCAAGAGCCTCTGTGGAAGGGGTTCCTGCCACCATACAGGCGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR CAA 72 bp | CCTGTATGGTGGCAGGAACCCCTTCCACAGAGGCTCTaGACAAGGGCTGCGGTTCCTTGGGGTGACTTGGAA | + |
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Preference number: 4 (lower is better) Translates to: PVWWQEPLPQRL*TRAAVPWGDLE Trigger: TTCCAAGTCACCCCAAGGAACCGCAGCCCTTGTCAAGAGCCTCTGTGGAAGGGGTTCCTGCCACCATACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR CAA 72 bp | CAGGTCTTTGGCTTGGGCCCTCAGTGTCTCAAGGAGTaGATCCCCTGGAATCCCAGTCTTCCAGGGGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: QVFGLGPQCLKE*IPWNPSLPGGG Trigger: TCCTCCCCCTGGAAGACTGGGATTCCAGGGGATCAACTCCTTGAGACACTGAGGGCCCAAGCCAAAGACCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| CDS-3UTR CCA 90 bp | ACACTTTCACCTGCTGAGCCTGCTCACTGCTCTCCAAGGTGGTGGTTTGCTTTGCAGCAGACAGACACCTaGAGTCTCAGGCACCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: TLSPAEPAHCSPRWWFALQQTDT*SLRHRP Trigger: TGGCCGGTGCCTGAGACTCCAGGTGTCTGTCTGCTG...CAAAGCAAACCACCACCTTGGAGAGCAGTGAGCAGGCTCAGCAGGTGAAAGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| CDS-3UTR TCA 90 bp | GGTCAAGGCTCTGTGGTGAGCTCACACTTTCACCTGCTGAGCCTGCTCACTGCTGGACTCCCAACAGGATaGGCTGACTCATGTGATGAC | + |
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Preference number: 4 (lower is better) Translates to: GQGSVVSSHFHLLSLLTAGLPTG*ADSCDD Trigger: GTCATCACATGAGTCAGCTCATCCTGTTGGGAGTCC...AGCAGTGAGCAGGCTCAGCAGGTGAAAGTGTGAGCTCACCACAGAGCCTTGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR CAA 72 bp | GTGCACGCGTGCCCGCGCATGTGTGTGGCATATCCATaGACACGCCGTGTAGCATGTTCGAAGGACAACTTT | + |
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Preference number: 4 (lower is better) Translates to: VHACPRMCVAYP*TRRVACSKDNF Trigger: AAAGTTGTCCTTCGAACATGCTACACGGCGTGTCAATGGATATGCCACACACATGCGCGGGCACGCGTGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| CDS-3UTR TCA 90 bp | CCTACAAGGGTCACCTCAGATCCTCCGACTTTGCACATCAAAGTTTCATCCTGTTGTCTAGGTAATCGTTaGAGCCCAGCTCCACCACGG | + |
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Preference number: 4 (lower is better) Translates to: PTRVTSDPPTLHIKVSSCCLGNR*SPAPPR Trigger: CCGTGGTGGAGCTGGGCTTCAACGATTACCTAGACA...ACAGGATGAAACTTTGATGTGCAAAGTCGGAGGATCTGAGGTGACCCTTGTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| 3UTR CAA 72 bp | TTGACACGCCGTGTAGCATGTTCGAAGGACAACTTTTaGGGGTGTGTTCTCTCTCTTCACAGTGTGGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: LTRRVACSKDNF*GCVLSLHSVGS Trigger: GGAACCCACACTGTGAAGAGAGAGAACACACCCCAAAAAGTTGTCCTTCGAACATGCTACACGGCGTGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| CDS-3UTR TCA 90 bp | GTCACCTACAAGGGTCACCTCAGATCCTCCGACTTTGCACATCAAAGTTTCATCGCGCTGAATCTTTTCTaGGAATCGAACAGGGCTGAA | + |
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Preference number: 4 (lower is better) Translates to: VTYKGHLRSSDFAHQSFIALNLF*ESNRAE Trigger: TTCAGCCCTGTTCGATTCTCAGAAAAGATTCAGCGC...GATGAAACTTTGATGTGCAAAGTCGGAGGATCTGAGGTGACCCTTGTAGGTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| CDS CCA 90 bp | GCTGACTCATGTGATGACCCGCTCTCCTTGCAGCAGACAGACACCTaGAGTCTCAGGCACCGGCCAGGACTCTCCGGAGTCGGCACCGAG | + |
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Preference number: 5 (lower is better) Translates to: ADSCDDPLSLQQTDT*SLRHRPGLSGVGTE Trigger: CTCGGTGCCGACTCCGGAGAGTCCTGGCCGGTGCCTGAGACTCCAGGTGTCTGTCTGCTGCAAGGAGAGCGGGTCATCACATGAGTCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| CDS TCA 90 bp | CCCCGCCACCCGGACGTACCGCTTTCTCCAGGACTCCCAACAGGATaGGCTGACTCATGTGATGACCCGCTCTCCTTGCAGCAGACAGAC | + |
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Preference number: 5 (lower is better) Translates to: PRHPDVPLSPGLPTG*ADSCDDPLSLQQTD Trigger: GTCTGTCTGCTGCAAGGAGAGCGGGTCATCACATGAGTCAGCTCATCCTGTTGGGAGTCCTGGAGAAAGCGGTACGTCCGGGTGGCGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| CDS-3UTR CAA 90 bp | GCGCCATGGCTTCTCCTTTGCTTCTTGGCCAGGAACCCACCTGTTCCCAGGTCTAGGAGTTCCAGTAGATaGGGTGGCGGAGGCTGGAGC | + |
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Preference number: 5 (lower is better) Translates to: APWLLLCFLARNPPVPRSRSSSR*GGGGWS Trigger: GCTCCAGCCTCCGCCACCCAATCTACTGGAACTCCT...AGACCTGGGAACAGGTGGGTTCCTGGCCAAGAAGCAAAGGAGAAGCCATGGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| CDS GCA 90 bp | GACTCCCAACAGGATGAGCTGACTCATGTGATGACCCGCTCTCCTTaGAGCAGACAGACACCTGGAGTCTCAGGCACCGGCCAGGACTCT | + |
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Preference number: 5 (lower is better) Translates to: DSQQDELTHVMTRSP*SRQTPGVSGTGQDS Trigger: AGAGTCCTGGCCGGTGCCTGAGACTCCAGGTGTCTGTCTGCTGCAAGGAGAGCGGGTCATCACATGAGTCAGCTCATCCTGTTGGGAGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| CDS GCA 90 bp | GCATCGAGCAATTCCAGCGCTGGAAGGCATTTGCCCCCTCTGCCGTaGAGGCCTCGTAGCCTGACCAGTCCACCATGTATAATGCAAAGG | + |
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Preference number: 5 (lower is better) Translates to: ASSNSSAGRHLPPLP*RPRSLTSPPCIMQR Trigger: CCTTTGCATTATACATGGTGGACTGGTCAGGCTACGAGGCCTGCACGGCAGAGGGGGCAAATGCCTTCCAGCGCTGGAATTGCTCGATGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| CDS TCA 90 bp | GCCCTGGGCTTTCATAATGTGGGCAGAAGATGTCTAGGTAATCGTTaGAGCCCAGCTCCACCACGGCATCTCCTCGGAGCAACCTGGGGT | + |
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Preference number: 5 (lower is better) Translates to: ALGFHNVGRRCLGNR*SPAPPRHLLGATWG Trigger: ACCCCAGGTTGCTCCGAGGAGATGCCGTGGTGGAGCTGGGCTTCAACGATTACCTAGACATCTTCTGCCCACATTATGAAAGCCCAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| CDS GCA 72 bp | CAGGATGAGCTGACTCATGTGATGACCCGCTCTCCTTaGAGCAGACAGACACCTGGAGTCTCAGGCACCGGC | + |
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Preference number: 6 (lower is better) Translates to: QDELTHVMTRSP*SRQTPGVSGTG Trigger: GCCGGTGCCTGAGACTCCAGGTGTCTGTCTGCTGCAAGGAGAGCGGGTCATCACATGAGTCAGCTCATCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| CDS TCA 72 bp | CCGGACGTACCGCTTTCTCCAGGACTCCCAACAGGATaGGCTGACTCATGTGATGACCCGCTCTCCTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: PDVPLSPGLPTG*ADSCDDPLSLQ Trigger: CTGCAAGGAGAGCGGGTCATCACATGAGTCAGCTCATCCTGTTGGGAGTCCTGGAGAAAGCGGTACGTCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| CDS GCA 72 bp | AATTCCAGCGCTGGAAGGCATTTGCCCCCTCTGCCGTaGAGGCCTCGTAGCCTGACCAGTCCACCATGTATA | + |
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Preference number: 6 (lower is better) Translates to: NSSAGRHLPPLP*RPRSLTSPPCI Trigger: TATACATGGTGGACTGGTCAGGCTACGAGGCCTGCACGGCAGAGGGGGCAAATGCCTTCCAGCGCTGGAATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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| CDS TCA 72 bp | TTTCATAATGTGGGCAGAAGATGTCTAGGTAATCGTTaGAGCCCAGCTCCACCACGGCATCTCCTCGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: FHNVGRRCLGNR*SPAPPRHLLGA Trigger: TGCTCCGAGGAGATGCCGTGGTGGAGCTGGGCTTCAACGATTACCTAGACATCTTCTGCCCACATTATGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029674.8 |
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