Pregenerated sensors for EFNA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027954Ensembl transcript IDs: ENSMUST00000029566.9, ENSMUST00000118587.8, ENSMUST00000118860.2
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAGGGATGGGGAGGATGCAGTCAGGGCCGGGCTACAAACCTCTCTaGCAGCCCAGCAGGTGGAAATCTTGCAGAGATGCTGGGTCAGCC | + |
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Preference number: 1 (lower is better) Translates to: PGMGRMQSGPGYKPL*QPSRWKSCRDAGSA Trigger: GGCTGACCCAGCATCTCTGCAAGATTTCCACCTGCTGGGCTGCCAGAGAGGTTTGTAGCCCGGCCCTGACTGCATCCTCCCCATCCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR GCA 90 bp | GGGCCGGGCTACAAACCTCTCTGGCAGCCCAGCAGGTGGAAATCTTaGAGAGATGCTGGGTCAGCCCAAGCTGCCTCTTCTGTACCTGGC | + |
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Preference number: 1 (lower is better) Translates to: GPGYKPLWQPSRWKS*RDAGSAQAASSVPG Trigger: GCCAGGTACAGAAGAGGCAGCTTGGGCTGACCCAGCATCTCTGCAAGATTTCCACCTGCTGGGCTGCCAGAGAGGTTTGTAGCCCGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR GCA 90 bp | GTGGCGTCTTGTGGGTGTAGTGGGAGAGGTTCCCAGGGCTGGGGCTaGCCCTTAGTCCCATTCCAATCCATAAGCCAGGGCAAGCGTACA | + |
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Preference number: 1 (lower is better) Translates to: VASCGCSGRGSQGWG*PLVPFQSISQGKRT Trigger: TGTACGCTTGCCCTGGCTTATGGATTGGAATGGGACTAAGGGGCAGCCCCAGCCCTGGGAACCTCTCCCACTACACCCACAAGACGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR GCA 90 bp | CTACAAACCTCTCTGGCAGCCCAGCAGGTGGAAATCTTGCAGAGATaGTGGGTCAGCCCAAGCTGCCTCTTCTGTACCTGGCTCCCCCGC | + |
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Preference number: 1 (lower is better) Translates to: LQTSLAAQQVEILQR*WVSPSCLFCTWLPR Trigger: GCGGGGGAGCCAGGTACAGAAGAGGCAGCTTGGGCTGACCCAGCATCTCTGCAAGATTTCCACCTGCTGGGCTGCCAGAGAGGTTTGTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR CCA 90 bp | TTCATGGTGGCGTCTTGTGGGTGTAGTGGGAGAGGTTCCCAGGGCTaGGGCTGCCCCTTAGTCCCATTCCAATCCATAAGCCAGGGCAAG | + |
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Preference number: 1 (lower is better) Translates to: FMVASCGCSGRGSQG*GCPLVPFQSISQGK Trigger: CTTGCCCTGGCTTATGGATTGGAATGGGACTAAGGGGCAGCCCCAGCCCTGGGAACCTCTCCCACTACACCCACAAGACGCCACCATGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR CCA 90 bp | ATGCAGTCAGGGCCGGGCTACAAACCTCTCTGGCAGCCCAGCAGGTaGAAATCTTGCAGAGATGCTGGGTCAGCCCAAGCTGCCTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: MQSGPGYKPLWQPSR*KSCRDAGSAQAASS Trigger: AGAAGAGGCAGCTTGGGCTGACCCAGCATCTCTGCAAGATTTCCACCTGCTGGGCTGCCAGAGAGGTTTGTAGCCCGGCCCTGACTGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR GCA 90 bp | TGTACACACGGGCACTGCCCTTACAGCTACACTCTAAAACCAGGCTaGTTCAGTCCTCCTGTTGGCACAGCTCCAGGGAATGTTGCCCCA | + |
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Preference number: 1 (lower is better) Translates to: CTHGHCPYSYTLKPG*FSPPVGTAPGNVAP Trigger: TGGGGCAACATTCCCTGGAGCTGTGCCAACAGGAGGACTGAAGCAGCCTGGTTTTAGAGTGTAGCTGTAAGGGCAGTGCCCGTGTGTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR GCA 90 bp | GCCCTGCCCGTTAAGCTAAACTCCACAGACTGTACACACGGGCACTaGCCTTACAGCTACACTCTAAAACCAGGCTGCTTCAGTCCTCCT | + |
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Preference number: 1 (lower is better) Translates to: ALPVKLNSTDCTHGH*PYSYTLKPGCFSPP Trigger: AGGAGGACTGAAGCAGCCTGGTTTTAGAGTGTAGCTGTAAGGGCAGTGCCCGTGTGTACAGTCTGTGGAGTTTAGCTTAACGGGCAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR CCA 90 bp | CCACTGAGGCCTCTTAATGGGCCAGGTCCGCACAGCTTGTTTCTTTaGCTTAAAGGCAGAAACTGCAGGTTAAGGACCTTCTCCACTTCT | + |
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Preference number: 1 (lower is better) Translates to: PLRPLNGPGPHSLFL*LKGRNCRLRTFSTS Trigger: AGAAGTGGAGAAGGTCCTTAACCTGCAGTTTCTGCCTTTAAGCCAAAGAAACAAGCTGTGCGGACCTGGCCCATTAAGAGGCCTCAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR CCA 90 bp | TCAAGCTTTTCCTTCGGTCAGTTCATCTGCACATTATGGCTTCCTTaGGGAAGGACGTCTTTACCAAGTTCAGTGTCCAACCGCATGACC | + |
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Preference number: 1 (lower is better) Translates to: SSFSFGQFICTLWLP*GRTSLPSSVSNRMT Trigger: GGTCATGCGGTTGGACACTGAACTTGGTAAAGACGTCCTTCCCCAAGGAAGCCATAATGTGCAGATGAACTGACCGAAGGAAAAGCTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR CCA 90 bp | GAAGCTGTCTCAAGCTTTTCCTTCGGTCAGTTCATCTGCACATTATaGCTTCCTTGGGGAAGGACGTCTTTACCAAGTTCAGTGTCCAAC | + |
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Preference number: 1 (lower is better) Translates to: EAVSSFSFGQFICTL*LPWGRTSLPSSVSN Trigger: GTTGGACACTGAACTTGGTAAAGACGTCCTTCCCCAAGGAAGCCATAATGTGCAGATGAACTGACCGAAGGAAAAGCTTGAGACAGCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGCCCAGCAGGTGGAAATCTTGCAGAGATGCTGGGTCAGCCCAAGCTGCCTCTCCCAGGGCTGGGGCTaGCCCTTAGTCCCATTCCAA | + |
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Preference number: 2 (lower is better) Translates to: AAQQVEILQRCWVSPSCLSQGWG*PLVPFQ Trigger: TTGGAATGGGACTAAGGGGCAGCCCCAGCCCTGGGA...GAGGCAGCTTGGGCTGACCCAGCATCTCTGCAAGATTTCCACCTGCTGGGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR CAA 90 bp | AGGGCCGGGCTACAAACCTCTCTGGCAGCCCAGCAGGTGGAAATCTaGCAGAGATGCTGGGTCAGCCCAAGCTGCCTCTTCTGTACCTGG | + |
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Preference number: 2 (lower is better) Translates to: RAGLQTSLAAQQVEI*QRCWVSPSCLFCTW Trigger: CCAGGTACAGAAGAGGCAGCTTGGGCTGACCCAGCATCTCTGCAAGATTTCCACCTGCTGGGCTGCCAGAGAGGTTTGTAGCCCGGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR-3UTR GCA 90 bp | TACATGTGGGCCCTGCCCGTTAAGCTAAACTCCACAGACTGTACACACGGGCACCAGGGATGGGGAGGATaGAGTCAGGGCCGGGCTACA | + |
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Preference number: 2 (lower is better) Translates to: YMWALPVKLNSTDCTHGHQGWGG*SQGRAT Trigger: TGTAGCCCGGCCCTGACTGCATCCTCCCCATCCCTG...GTGCCCGTGTGTACAGTCTGTGGAGTTTAGCTTAACGGGCAGGGCCCACATGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR-3UTR CCA 90 bp | TACATGTGGGCCCTGCCCGTTAAGCTAAACTCCACAGACTGTACACACGGGCACAGAGGTTCCCAGGGCTaGGGCTGCCCCTTAGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: YMWALPVKLNSTDCTHGHRGSQG*GCPLVP Trigger: TGGGACTAAGGGGCAGCCCCAGCCCTGGGAACCTCT...GTGCCCGTGTGTACAGTCTGTGGAGTTTAGCTTAACGGGCAGGGCCCACATGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGTCCAACCGCATGACCTCAGGCTCTTTTTAGCCCTTCTCCCACTGAGGCCTAGAGGTTCCCAGGGCTaGGGCTGCCCCTTAGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: SVQPHDLRLFLALLPLRPRGSQG*GCPLVP Trigger: TGGGACTAAGGGGCAGCCCCAGCCCTGGGAACCTCT...AGGCCTCAGTGGGAGAAGGGCTAAAAAGAGCCTGAGGTCATGCGGTTGGACACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR-3UTR GCA 90 bp | TTTTTAGCCCTTCTCCCACTGAGGCCTCTTAATGGGCCAGGTCCGCACAGCTTGTCCCAGGGCTGGGGCTaGCCCTTAGTCCCATTCCAA | + |
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Preference number: 2 (lower is better) Translates to: FLALLPLRPLNGPGPHSLSQGWG*PLVPFQ Trigger: TTGGAATGGGACTAAGGGGCAGCCCCAGCCCTGGGA...CAAGCTGTGCGGACCTGGCCCATTAAGAGGCCTCAGTGGGAGAAGGGCTAAAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR-3UTR GCA 90 bp | CTGTACACACGGGCACTGCCCTTACAGCTACACTCTAAAACCAGGCTGCTTCAGCAGGGATGGGGAGGATaGAGTCAGGGCCGGGCTACA | + |
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Preference number: 2 (lower is better) Translates to: LYTRALPLQLHSKTRLLQQGWGG*SQGRAT Trigger: TGTAGCCCGGCCCTGACTGCATCCTCCCCATCCCTG...CTGAAGCAGCCTGGTTTTAGAGTGTAGCTGTAAGGGCAGTGCCCGTGTGTACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR-3UTR CCA 90 bp | TTCAGTGTCCAACCGCATGACCTCAGGCTCTTTTTAGCCCTTCTCCCACTGAGGAGAGGTTCCCAGGGCTaGGGCTGCCCCTTAGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: FSVQPHDLRLFLALLPLRRGSQG*GCPLVP Trigger: TGGGACTAAGGGGCAGCCCCAGCCCTGGGAACCTCT...CCTCAGTGGGAGAAGGGCTAAAAAGAGCCTGAGGTCATGCGGTTGGACACTGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR-3UTR CCA 90 bp | TACATGTGGGCCCTGCCCGTTAAGCTAAACTCCACAGACTGTACACACGGGCACATGTTGCCCCAGGGATaGGGAGGATGCAGTCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: YMWALPVKLNSTDCTHGHMLPQG*GGCSQG Trigger: GCCCTGACTGCATCCTCCCCATCCCTGGGGCAACAT...GTGCCCGTGTGTACAGTCTGTGGAGTTTAGCTTAACGGGCAGGGCCCACATGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR-3UTR GCA 90 bp | TACATGTGGGCCCTGCCCGTTAAGCTAAACTCCACAGACTGTACACACGGGCACAGCTCCAGGGAATGTTaGCCCAGGGATGGGGAGGAT | + |
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Preference number: 2 (lower is better) Translates to: YMWALPVKLNSTDCTHGHSSREC*PRDGED Trigger: ATCCTCCCCATCCCTGGGGCAACATTCCCTGGAGCT...GTGCCCGTGTGTACAGTCTGTGGAGTTTAGCTTAACGGGCAGGGCCCACATGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR-3UTR CCA 90 bp | TACATGTGGGCCCTGCCCGTTAAGCTAAACTCCACAGACTGTACACACGGGCACATCTTGCAGAGATGCTaGGTCAGCCCAAGCTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: YMWALPVKLNSTDCTHGHILQRC*VSPSCL Trigger: GAGGCAGCTTGGGCTGACCCAGCATCTCTGCAAGAT...GTGCCCGTGTGTACAGTCTGTGGAGTTTAGCTTAACGGGCAGGGCCCACATGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR-3UTR GCA 90 bp | TGTACACACGGGCACTGCCCTTACAGCTACACTCTAAAACCAGGCTGCTTCAGTAGCTCCAGGGAATGTTaGCCCAGGGATGGGGAGGAT | + |
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Preference number: 2 (lower is better) Translates to: CTHGHCPYSYTLKPGCFSSSREC*PRDGED Trigger: ATCCTCCCCATCCCTGGGGCAACATTCCCTGGAGCT...ACTGAAGCAGCCTGGTTTTAGAGTGTAGCTGTAAGGGCAGTGCCCGTGTGTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCTCTGGCAGCCCAGCAGGTGGAAATCTTGCAGAGATGCTGGGTCAGCCCAATTCATCTGCACATTATaGCTTCCTTGGGGAAGGACG | + |
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Preference number: 2 (lower is better) Translates to: PLWQPSRWKSCRDAGSAQFICTL*LPWGRT Trigger: CGTCCTTCCCCAAGGAAGCCATAATGTGCAGATGAA...TTGGGCTGACCCAGCATCTCTGCAAGATTTCCACCTGCTGGGCTGCCAGAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR-3UTR CCA 90 bp | TACATGTGGGCCCTGCCCGTTAAGCTAAACTCCACAGACTGTACACACGGGCACCTTCAGTCCTCCTGTTaGCACAGCTCCAGGGAATGT | + |
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Preference number: 2 (lower is better) Translates to: YMWALPVKLNSTDCTHGHLQSSC*HSSREC Trigger: ACATTCCCTGGAGCTGTGCCAACAGGAGGACTGAAG...GTGCCCGTGTGTACAGTCTGTGGAGTTTAGCTTAACGGGCAGGGCCCACATGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCACATTATGGCTTCCTTGGGGAAGGACGTCTTTACCAAGTTCAGTGTCCAATCCCAGGGCTGGGGCTaGCCCTTAGTCCCATTCCAA | + |
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Preference number: 2 (lower is better) Translates to: LHIMASLGKDVFTKFSVQSQGWG*PLVPFQ Trigger: TTGGAATGGGACTAAGGGGCAGCCCCAGCCCTGGGA...TTGGACACTGAACTTGGTAAAGACGTCCTTCCCCAAGGAAGCCATAATGTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR-3UTR CCA 90 bp | TACATGTGGGCCCTGCCCGTTAAGCTAAACTCCACAGACTGTACACACGGGCACCCTTTTGAGGCTTCATaGTGGCGTCTTGTGGGTGTA | + |
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Preference number: 2 (lower is better) Translates to: YMWALPVKLNSTDCTHGHPFEAS*WRLVGV Trigger: TACACCCACAAGACGCCACCATGAAGCCTCAAAAGG...GTGCCCGTGTGTACAGTCTGTGGAGTTTAGCTTAACGGGCAGGGCCCACATGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTTAGCCCTTCTCCCACTGAGGCCTCTTAATGGGCCAGGTCCGCACAGCTTGCCTTTTGAGGCTTCATaGTGGCGTCTTGTGGGTGTA | + |
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Preference number: 2 (lower is better) Translates to: FLALLPLRPLNGPGPHSLPFEAS*WRLVGV Trigger: TACACCCACAAGACGCCACCATGAAGCCTCAAAAGG...CAAGCTGTGCGGACCTGGCCCATTAAGAGGCCTCAGTGGGAGAAGGGCTAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR-3UTR CCA 90 bp | TGTACACACGGGCACTGCCCTTACAGCTACACTCTAAAACCAGGCTGCTTCAGTTCCATCCCTCTGAAGTaGAGGCAGGGATGGCACAGT | + |
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Preference number: 2 (lower is better) Translates to: CTHGHCPYSYTLKPGCFSSIPLK*RQGWHS Trigger: ACTGTGCCATCCCTGCCTCCACTTCAGAGGGATGGA...ACTGAAGCAGCCTGGTTTTAGAGTGTAGCTGTAAGGGCAGTGCCCGTGTGTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR-3UTR CCA 90 bp | GCACATTATGGCTTCCTTGGGGAAGGACGTCTTTACCAAGTTCAGTGTCCAACCTCCATCCCTCTGAAGTaGAGGCAGGGATGGCACAGT | + |
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Preference number: 2 (lower is better) Translates to: AHYGFLGEGRLYQVQCPTSIPLK*RQGWHS Trigger: ACTGTGCCATCCCTGCCTCCACTTCAGAGGGATGGA...GGTTGGACACTGAACTTGGTAAAGACGTCCTTCCCCAAGGAAGCCATAATGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCTCTTCTGTACCTGGCTCCCCCGCAGGAAGCTGTCTCAAGCTTTTCCTTCGACATTATGGCTTCCTTaGGGAAGGACGTCTTTACCA | + |
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Preference number: 2 (lower is better) Translates to: CLFCTWLPRRKLSQAFPSTLWLP*GRTSLP Trigger: TGGTAAAGACGTCCTTCCCCAAGGAAGCCATAATGT...CGAAGGAAAAGCTTGAGACAGCTTCCTGCGGGGGAGCCAGGTACAGAAGAGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR-3UTR CCA 90 bp | CACGGGCACTGCCCTTACAGCTACACTCTAAAACCAGGCTGCTTCAGTCCTCCTTTCATCTGCACATTATaGCTTCCTTGGGGAAGGACG | + |
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Preference number: 2 (lower is better) Translates to: HGHCPYSYTLKPGCFSPPFICTL*LPWGRT Trigger: CGTCCTTCCCCAAGGAAGCCATAATGTGCAGATGAA...AGGAGGACTGAAGCAGCCTGGTTTTAGAGTGTAGCTGTAAGGGCAGTGCCCGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR-3UTR GCA 90 bp | TTCAGTGTCCAACCGCATGACCTCAGGCTCTTTTTAGCCCTTCTCCCACTGAGGCTTAAAGGCAGAAACTaGAGGTTAAGGACCTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: FSVQPHDLRLFLALLPLRLKGRN*RLRTFS Trigger: GGAGAAGGTCCTTAACCTGCAGTTTCTGCCTTTAAG...CCTCAGTGGGAGAAGGGCTAAAAAGAGCCTGAGGTCATGCGGTTGGACACTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCAAGCTTTTCCTTCGGTCAGTTCATCTGCACATTATGGCTTCCTTGGGGAATCCATCCCTCTGAAGTaGAGGCAGGGATGGCACAGT | + |
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Preference number: 2 (lower is better) Translates to: SQAFPSVSSSAHYGFLGESIPLK*RQGWHS Trigger: ACTGTGCCATCCCTGCCTCCACTTCAGAGGGATGGA...TTCCCCAAGGAAGCCATAATGTGCAGATGAACTGACCGAAGGAAAAGCTTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR-3UTR CCA 90 bp | TGTACACACGGGCACTGCCCTTACAGCTACACTCTAAAACCAGGCTGCTTCAGTTTCATCTGCACATTATaGCTTCCTTGGGGAAGGACG | + |
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Preference number: 2 (lower is better) Translates to: CTHGHCPYSYTLKPGCFSFICTL*LPWGRT Trigger: CGTCCTTCCCCAAGGAAGCCATAATGTGCAGATGAA...ACTGAAGCAGCCTGGTTTTAGAGTGTAGCTGTAAGGGCAGTGCCCGTGTGTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR CAA 90 bp | CTCAAGCTTTTCCTTCGGTCAGTTCATCTGCACATTATGGCTTCCTaGGGGAAGGACGTCTTTACCAAGTTCAGTGTCCAACCGCATGAC | + |
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Preference number: 2 (lower is better) Translates to: LKLFLRSVHLHIMAS*GKDVFTKFSVQPHD Trigger: GTCATGCGGTTGGACACTGAACTTGGTAAAGACGTCCTTCCCCAAGGAAGCCATAATGTGCAGATGAACTGACCGAAGGAAAAGCTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR-3UTR GCA 90 bp | TTATGGCTTCCTTGGGGAAGGACGTCTTTACCAAGTTCAGTGTCCAACCGCATGCTTAAAGGCAGAAACTaGAGGTTAAGGACCTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: LWLPWGRTSLPSSVSNRMLKGRN*RLRTFS Trigger: GGAGAAGGTCCTTAACCTGCAGTTTCTGCCTTTAAG...CATGCGGTTGGACACTGAACTTGGTAAAGACGTCCTTCCCCAAGGAAGCCATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR CAA 90 bp | CACTTCTTTCTCCATCCCTCTGAAGTGGAGGCAGGGATGGCACAGTaGGGCTGGTTAAACTCTTTTCGGTTAAAACCCTTAATACTGAAC | + |
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Preference number: 2 (lower is better) Translates to: HFFLHPSEVEAGMAQ*GWLNSFRLKPLILN Trigger: GTTCAGTATTAAGGGTTTTAACCGAAAAGAGTTTAACCAGCCCAACTGTGCCATCCCTGCCTCCACTTCAGAGGGATGGAGAAAGAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR CCA 72 bp | GGGCCGGGCTACAAACCTCTCTGGCAGCCCAGCAGGTaGAAATCTTGCAGAGATGCTGGGTCAGCCCAAGCT | + |
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Preference number: 3 (lower is better) Translates to: GPGYKPLWQPSR*KSCRDAGSAQA Trigger: AGCTTGGGCTGACCCAGCATCTCTGCAAGATTTCCACCTGCTGGGCTGCCAGAGAGGTTTGTAGCCCGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR CCA 72 bp | CTGGCAGCCCAGCAGGTGGAAATCTTGCAGAGATGCTaGGTCAGCCCAAGCTGCCTCTTCTGTACCTGGCTC | + |
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Preference number: 3 (lower is better) Translates to: LAAQQVEILQRC*VSPSCLFCTWL Trigger: GAGCCAGGTACAGAAGAGGCAGCTTGGGCTGACCCAGCATCTCTGCAAGATTTCCACCTGCTGGGCTGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR CCA 72 bp | GGGAGGATGCAGTCAGGGCCGGGCTACAAACCTCTCTaGCAGCCCAGCAGGTGGAAATCTTGCAGAGATGCT | + |
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Preference number: 3 (lower is better) Translates to: GRMQSGPGYKPL*QPSRWKSCRDA Trigger: AGCATCTCTGCAAGATTTCCACCTGCTGGGCTGCCAGAGAGGTTTGTAGCCCGGCCCTGACTGCATCCTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR CCA 72 bp | AGATGCTGGGTCAGCCCAAGCTGCCTCTTCTGTACCTaGCTCCCCCGCAGGAAGCTGTCTCAAGCTTTTCCT | + |
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Preference number: 3 (lower is better) Translates to: RCWVSPSCLFCT*LPRRKLSQAFP Trigger: AGGAAAAGCTTGAGACAGCTTCCTGCGGGGGAGCCAGGTACAGAAGAGGCAGCTTGGGCTGACCCAGCATCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| 3UTR GCA 72 bp | TACAAACCTCTCTGGCAGCCCAGCAGGTGGAAATCTTaGAGAGATGCTGGGTCAGCCCAAGCTGCCTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: YKPLWQPSRWKS*RDAGSAQAASS Trigger: AGAAGAGGCAGCTTGGGCTGACCCAGCATCTCTGCAAGATTTCCACCTGCTGGGCTGCCAGAGAGGTTTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| 3UTR GCA 72 bp | GGGCACTGCCCTTACAGCTACACTCTAAAACCAGGCTaGTTCAGTCCTCCTGTTGGCACAGCTCCAGGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: GHCPYSYTLKPG*FSPPVGTAPGN Trigger: ATTCCCTGGAGCTGTGCCAACAGGAGGACTGAAGCAGCCTGGTTTTAGAGTGTAGCTGTAAGGGCAGTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTGTACCTGGCTCCCCCGCAGGAAGCTGTCTCAAGCTTTTCCTTCGGTCAGTTCCAGGTCCGCACAGCTaGTTTCTTTGGCTTAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: SVPGSPAGSCLKLFLRSVPGPHS*FLWLKG Trigger: GCCTTTAAGCCAAAGAAACAAGCTGTGCGGACCTGG...AACTGACCGAAGGAAAAGCTTGAGACAGCTTCCTGCGGGGGAGCCAGGTACAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| 3UTR-3UTR CAA 90 bp | TTATGGCTTCCTTGGGGAAGGACGTCTTTACCAAGTTCAGTGTCCAACCGCATGCCAGGTCCGCACAGCTaGTTTCTTTGGCTTAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LWLPWGRTSLPSSVSNRMPGPHS*FLWLKG Trigger: GCCTTTAAGCCAAAGAAACAAGCTGTGCGGACCTGG...CATGCGGTTGGACACTGAACTTGGTAAAGACGTCCTTCCCCAAGGAAGCCATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| 3UTR TCA 72 bp | GAAGGACGTCTTTACCAAGTTCAGTGTCCAACCGCATaGCCTCAGGCTCTTTTTAGCCCTTCTCCCACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: EGRLYQVQCPTA*PQALFSPSPTE Trigger: CTCAGTGGGAGAAGGGCTAAAAAGAGCCTGAGGTCATGCGGTTGGACACTGAACTTGGTAAAGACGTCCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTCTCAAGCTTTTCCTTCGGTCAGTTCATCTGCACATTATGGCTTCCTTGGGGCCAGGTCCGCACAGCTaGTTTCTTTGGCTTAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: CLKLFLRSVHLHIMASLGPGPHS*FLWLKG Trigger: GCCTTTAAGCCAAAGAAACAAGCTGTGCGGACCTGG...CCCCAAGGAAGCCATAATGTGCAGATGAACTGACCGAAGGAAAAGCTTGAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| 3UTR GCA 72 bp | GTTAAGCTAAACTCCACAGACTGTACACACGGGCACTaGCCTTACAGCTACACTCTAAAACCAGGCTGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: VKLNSTDCTHGH*PYSYTLKPGCF Trigger: GAAGCAGCCTGGTTTTAGAGTGTAGCTGTAAGGGCAGTGCCCGTGTGTACAGTCTGTGGAGTTTAGCTTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| 3UTR CCA 72 bp | CCCTCTGAAGTGGAGGCAGGGATGGCACAGTTGGGCTaGTTAAACTCTTTTCGGTTAAAACCCTTAATACTG | + |
|
Preference number: 3 (lower is better) Translates to: PSEVEAGMAQLG*LNSFRLKPLIL Trigger: CAGTATTAAGGGTTTTAACCGAAAAGAGTTTAACCAGCCCAACTGTGCCATCCCTGCCTCCACTTCAGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| 3UTR CCA 72 bp | TCCTTCGGTCAGTTCATCTGCACATTATGGCTTCCTTaGGGAAGGACGTCTTTACCAAGTTCAGTGTCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: SFGQFICTLWLP*GRTSLPSSVSN Trigger: GTTGGACACTGAACTTGGTAAAGACGTCCTTCCCCAAGGAAGCCATAATGTGCAGATGAACTGACCGAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| 3UTR CCA 72 bp | TCAAGCTTTTCCTTCGGTCAGTTCATCTGCACATTATaGCTTCCTTGGGGAAGGACGTCTTTACCAAGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: SSFSFGQFICTL*LPWGRTSLPSS Trigger: TGAACTTGGTAAAGACGTCCTTCCCCAAGGAAGCCATAATGTGCAGATGAACTGACCGAAGGAAAAGCTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS-3UTR CCA 90 bp | GGGGAGGATGCAGTCAGGGCCGGGCTACAAACCTCTCTGGCAGCCCAGCAGGTGTTCCAGAAGACGATGTaGCGGTCAGCAGCGGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GEDAVRAGLQTSLAAQQVFQKTM*RSAAAR Trigger: TCTGGCCGCTGCTGACCGCCACATCGTCTTCTGGAA...CACCTGCTGGGCTGCCAGAGAGGTTTGTAGCCCGGCCCTGACTGCATCCTCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029566.9 ENSMUST00000118860.2 |
||
| CDS-3UTR GCA 90 bp | CTCAGGCTCTTTTTAGCCCTTCTCCCACTGAGGCCTCTTAATGGGCCAGGTCCGAGCTTCTCCGGGCCATaGTTGGCACTGGGCCGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LRLFLALLPLRPLNGPGPSFSGP*LALGRL Trigger: CAACCGGCCCAGTGCCAAGCATGGCCCGGAGAAGCT...CGGACCTGGCCCATTAAGAGGCCTCAGTGGGAGAAGGGCTAAAAAGAGCCTGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS-3UTR GCA 90 bp | AGTGTCCAACCGCATGACCTCAGGCTCTTTTTAGCCCTTCTCCCACTGAGGCCTAGCTTCTCCGGGCCATaGTTGGCACTGGGCCGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SVQPHDLRLFLALLPLRPSFSGP*LALGRL Trigger: CAACCGGCCCAGTGCCAAGCATGGCCCGGAGAAGCT...AGGCCTCAGTGGGAGAAGGGCTAAAAAGAGCCTGAGGTCATGCGGTTGGACACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS-3UTR GCA 90 bp | GGGGAGGATGCAGTCAGGGCCGGGCTACAAACCTCTCTGGCAGCCCAGCAGGTGCGGCACTGTAACCAATaGTGTGCAAAACCTGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: GEDAVRAGLQTSLAAQQVRHCNQ*CAKPVL Trigger: AAGTACAGGTTTTGCACAGCATTGGTTACAGTGCCG...CACCTGCTGGGCTGCCAGAGAGGTTTGTAGCCCGGCCCTGACTGCATCCTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS-3UTR CCA 90 bp | GCAGCCCAGCAGGTGGAAATCTTGCAGAGATGCTGGGTCAGCCCAAGCTGCCTCGTGTGTATCGCTCCATaGCTGCATCTGCCACAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: AAQQVEILQRCWVSPSCLVCIAP*LHLPQS Trigger: ACTCTGTGGCAGATGCAGCCATGGAGCGATACACAC...GAGGCAGCTTGGGCTGACCCAGCATCTCTGCAAGATTTCCACCTGCTGGGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029566.9 ENSMUST00000118860.2 |
||
| CDS-3UTR CCA 90 bp | TTTTTAGCCCTTCTCCCACTGAGGCCTCTTAATGGGCCAGGTCCGCACAGCTTGTCTCCGGGCCATGCTTaGCACTGGGCCGGTTGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: FLALLPLRPLNGPGPHSLSPGHA*HWAGCN Trigger: ATTGCAACCGGCCCAGTGCCAAGCATGGCCCGGAGA...CAAGCTGTGCGGACCTGGCCCATTAAGAGGCCTCAGTGGGAGAAGGGCTAAAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS-3UTR CCA 90 bp | CCCTCTGAAGTGGAGGCAGGGATGGCACAGTTGGGCTGGTTAAACTCTTTTCGGTCTCCGGGCCATGCTTaGCACTGGGCCGGTTGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: PSEVEAGMAQLGWLNSFRSPGHA*HWAGCN Trigger: ATTGCAACCGGCCCAGTGCCAAGCATGGCCCGGAGA...CCGAAAAGAGTTTAACCAGCCCAACTGTGCCATCCCTGCCTCCACTTCAGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS-3UTR CCA 90 bp | TTTTTAGCCCTTCTCCCACTGAGGCCTCTTAATGGGCCAGGTCCGCACAGCTTGGAGTCTCTTCTCCTGTaGGTTGACATGGGCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FLALLPLRPLNGPGPHSLESLLL*VDMGLG Trigger: CCCCAGGCCCATGTCAACCCACAGGAGAAGAGACTC...CAAGCTGTGCGGACCTGGCCCATTAAGAGGCCTCAGTGGGAGAAGGGCTAAAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGTGTCCAACCGCATGACCTCAGGCTCTTTTTAGCCCTTCTCCCACTGAGGTGGCACTGGGCCGGTTaGAATTCCAACGGACCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FSVQPHDLRLFLALLPLRWHWAG*NSNGPG Trigger: ACCAGGTCCGTTGGAATTGCAACCGGCCCAGTGCCA...CCTCAGTGGGAGAAGGGCTAAAAAGAGCCTGAGGTCATGCGGTTGGACACTGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS-3UTR GCA 90 bp | CCTCTCTGGCAGCCCAGCAGGTGGAAATCTTGCAGAGATGCTGGGTCAGCCCAATACTTCCGGGTCATCTaGTTGGAGTCTCTTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLWQPSRWKSCRDAGSAQYFRVI*LESLLL Trigger: CAGGAGAAGAGACTCCAAGCAGATGACCCGGAAGTA...TTGGGCTGACCCAGCATCTCTGCAAGATTTCCACCTGCTGGGCTGCCAGAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS-3UTR CCA 90 bp | CACGGGCACTGCCCTTACAGCTACACTCTAAAACCAGGCTGCTTCAGTCCTCCTCAATTCCAACGGACCTaGTCCTTGGACTGGGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HGHCPYSYTLKPGCFSPPQFQRT*SLDWGW Trigger: CCAACCCCAGTCCAAGGACCAGGTCCGTTGGAATTG...AGGAGGACTGAAGCAGCCTGGTTTTAGAGTGTAGCTGTAAGGGCAGTGCCCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS-3UTR CCA 90 bp | AGTGTCCAACCGCATGACCTCAGGCTCTTTTTAGCCCTTCTCCCACTGAGGCCTCAATTCCAACGGACCTaGTCCTTGGACTGGGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVQPHDLRLFLALLPLRPQFQRT*SLDWGW Trigger: CCAACCCCAGTCCAAGGACCAGGTCCGTTGGAATTG...AGGCCTCAGTGGGAGAAGGGCTAAAAAGAGCCTGAGGTCATGCGGTTGGACACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS-3UTR CCA 90 bp | CTGTACACACGGGCACTGCCCTTACAGCTACACTCTAAAACCAGGCTGCTTCAGGGCCATGCTTGGCACTaGGCCGGTTGCAATTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LYTRALPLQLHSKTRLLQGHAWH*AGCNSN Trigger: GTTGGAATTGCAACCGGCCCAGTGCCAAGCATGGCC...CTGAAGCAGCCTGGTTTTAGAGTGTAGCTGTAAGGGCAGTGCCCGTGTGTACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS-3UTR CCA 90 bp | AAGTTCAGTGTCCAACCGCATGACCTCAGGCTCTTTTTAGCCCTTCTCCCACTGTCTCCGGGCCATGCTTaGCACTGGGCCGGTTGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: KFSVQPHDLRLFLALLPLSPGHA*HWAGCN Trigger: ATTGCAACCGGCCCAGTGCCAAGCATGGCCCGGAGA...CAGTGGGAGAAGGGCTAAAAAGAGCCTGAGGTCATGCGGTTGGACACTGAACTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS-3UTR GCA 90 bp | TGTACACACGGGCACTGCCCTTACAGCTACACTCTAAAACCAGGCTGCTTCAGTTGGCACTGGGCCGGTTaGAATTCCAACGGACCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CTHGHCPYSYTLKPGCFSWHWAG*NSNGPG Trigger: ACCAGGTCCGTTGGAATTGCAACCGGCCCAGTGCCA...ACTGAAGCAGCCTGGTTTTAGAGTGTAGCTGTAAGGGCAGTGCCCGTGTGTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS-3UTR TCA 90 bp | TGCCTCTTCTGTACCTGGCTCCCCCGCAGGAAGCTGTCTCAAGCTTTTCCTTCGTGGGCCTGGGGATTATaGGTGATTTTGCCATTGACA | + |
|
Preference number: 4 (lower is better) Translates to: CLFCTWLPRRKLSQAFPSWAWGL*VILPLT Trigger: TGTCAATGGCAAAATCACTCATAATCCCCAGGCCCA...CGAAGGAAAAGCTTGAGACAGCTTCCTGCGGGGGAGCCAGGTACAGAAGAGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 |
||
| CDS-3UTR GCA 90 bp | TTATGGCTTCCTTGGGGAAGGACGTCTTTACCAAGTTCAGTGTCCAACCGCATGTGGCACTGGGCCGGTTaGAATTCCAACGGACCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LWLPWGRTSLPSSVSNRMWHWAG*NSNGPG Trigger: ACCAGGTCCGTTGGAATTGCAACCGGCCCAGTGCCA...CATGCGGTTGGACACTGAACTTGGTAAAGACGTCCTTCCCCAAGGAAGCCATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS-3UTR CCA 90 bp | TGCCTCTTCTGTACCTGGCTCCCCCGCAGGAAGCTGTCTCAAGCTTTTCCTTCGCCTCCTCACGGAACTTaGGATTTGAACTGTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CLFCTWLPRRKLSQAFPSPPHGT*DLNCSR Trigger: TCTGGAACAGTTCAAATCCCAAGTTCCGTGAGGAGG...CGAAGGAAAAGCTTGAGACAGCTTCCTGCGGGGGAGCCAGGTACAGAAGAGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029566.9 ENSMUST00000118860.2 |
||
| CDS-3UTR TCA 90 bp | TGTACACACGGGCACTGCCCTTACAGCTACACTCTAAAACCAGGCTGCTTCAGTTCTTCTCCTGTGGGTTaGCATGGGCCTGGGGATTAT | + |
|
Preference number: 4 (lower is better) Translates to: CTHGHCPYSYTLKPGCFSSSPVG*HGPGDY Trigger: ATAATCCCCAGGCCCATGTCAACCCACAGGAGAAGA...ACTGAAGCAGCCTGGTTTTAGAGTGTAGCTGTAAGGGCAGTGCCCGTGTGTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGTGTCCAACCGCATGACCTCAGGCTCTTTTTAGCCCTTCTCCCACTGAGGTACTTCCGGGTCATCTaGTTGGAGTCTCTTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FSVQPHDLRLFLALLPLRYFRVI*LESLLL Trigger: CAGGAGAAGAGACTCCAAGCAGATGACCCGGAAGTA...CCTCAGTGGGAGAAGGGCTAAAAAGAGCCTGAGGTCATGCGGTTGGACACTGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS-3UTR CCA 90 bp | AAGCTTTTCCTTCGGTCAGTTCATCTGCACATTATGGCTTCCTTGGGGAAGGACGGCCATGCTTGGCACTaGGCCGGTTGCAATTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: KLFLRSVHLHIMASLGKDGHAWH*AGCNSN Trigger: GTTGGAATTGCAACCGGCCCAGTGCCAAGCATGGCC...GTCCTTCCCCAAGGAAGCCATAATGTGCAGATGAACTGACCGAAGGAAAAGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS-3UTR CCA 90 bp | ACCCTTAATACTGAACCTTTTGAGGCTTCATGGTGGCGTCTTGTGGGTGTAGTGGAGTCTCTTCTCCTGTaGGTTGACATGGGCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TLNTEPFEASWWRLVGVVESLLL*VDMGLG Trigger: CCCCAGGCCCATGTCAACCCACAGGAGAAGAGACTC...CACTACACCCACAAGACGCCACCATGAAGCCTCAAAAGGTTCAGTATTAAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS-3UTR TCA 90 bp | TTTTTAGCCCTTCTCCCACTGAGGCCTCTTAATGGGCCAGGTCCGCACAGCTTGACGGAACTTGGGATTTaGACTGTTCCAGAAGACGAT | + |
|
Preference number: 4 (lower is better) Translates to: FLALLPLRPLNGPGPHSLTELGI*TVPEDD Trigger: ATCGTCTTCTGGAACAGTTCAAATCCCAAGTTCCGT...CAAGCTGTGCGGACCTGGCCCATTAAGAGGCCTCAGTGGGAGAAGGGCTAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029566.9 ENSMUST00000118860.2 |
||
| CDS-3UTR GCA 90 bp | GTGGAGGCAGGGATGGCACAGTTGGGCTGGTTAAACTCTTTTCGGTTAAAACCCTACTTCCGGGTCATCTaGTTGGAGTCTCTTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VEAGMAQLGWLNSFRLKPYFRVI*LESLLL Trigger: CAGGAGAAGAGACTCCAAGCAGATGACCCGGAAGTA...GGGTTTTAACCGAAAAGAGTTTAACCAGCCCAACTGTGCCATCCCTGCCTCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS-3UTR CCA 90 bp | AAGCTTTTCCTTCGGTCAGTTCATCTGCACATTATGGCTTCCTTGGGGAAGGACCAATTCCAACGGACCTaGTCCTTGGACTGGGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KLFLRSVHLHIMASLGKDQFQRT*SLDWGW Trigger: CCAACCCCAGTCCAAGGACCAGGTCCGTTGGAATTG...GTCCTTCCCCAAGGAAGCCATAATGTGCAGATGAACTGACCGAAGGAAAAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS-3UTR TCA 90 bp | TGTACACACGGGCACTGCCCTTACAGCTACACTCTAAAACCAGGCTGCTTCAGTTGGGCCTGGGGATTATaGGTGATTTTGCCATTGACA | + |
|
Preference number: 4 (lower is better) Translates to: CTHGHCPYSYTLKPGCFSWAWGL*VILPLT Trigger: TGTCAATGGCAAAATCACTCATAATCCCCAGGCCCA...ACTGAAGCAGCCTGGTTTTAGAGTGTAGCTGTAAGGGCAGTGCCCGTGTGTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 |
||
| CDS-3UTR CCA 90 bp | TCGGTTAAAACCCTTAATACTGAACCTTTTGAGGCTTCATGGTGGCGTCTTGTGTTCCAGAAGACGATGTaGCGGTCAGCAGCGGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SVKTLNTEPFEASWWRLVFQKTM*RSAAAR Trigger: TCTGGCCGCTGCTGACCGCCACATCGTCTTCTGGAA...CACAAGACGCCACCATGAAGCCTCAAAAGGTTCAGTATTAAGGGTTTTAACCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029566.9 ENSMUST00000118860.2 |
||
| CDS-3UTR CCA 90 bp | TCGGTTAAAACCCTTAATACTGAACCTTTTGAGGCTTCATGGTGGCGTCTTGTGGAGTCTCTTCTCCTGTaGGTTGACATGGGCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SVKTLNTEPFEASWWRLVESLLL*VDMGLG Trigger: CCCCAGGCCCATGTCAACCCACAGGAGAAGAGACTC...CACAAGACGCCACCATGAAGCCTCAAAAGGTTCAGTATTAAGGGTTTTAACCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS-3UTR GCA 90 bp | GCTTTTCCTTCGGTCAGTTCATCTGCACATTATGGCTTCCTTGGGGAAGGACGTCGGCACTGTAACCAATaGTGTGCAAAACCTGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: AFPSVSSSAHYGFLGEGRRHCNQ*CAKPVL Trigger: AAGTACAGGTTTTGCACAGCATTGGTTACAGTGCCG...ACGTCCTTCCCCAAGGAAGCCATAATGTGCAGATGAACTGACCGAAGGAAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS-3UTR GCA 90 bp | GCACATTATGGCTTCCTTGGGGAAGGACGTCTTTACCAAGTTCAGTGTCCAACCCGGCACTGTAACCAATaGTGTGCAAAACCTGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: AHYGFLGEGRLYQVQCPTRHCNQ*CAKPVL Trigger: AAGTACAGGTTTTGCACAGCATTGGTTACAGTGCCG...GGTTGGACACTGAACTTGGTAAAGACGTCCTTCCCCAAGGAAGCCATAATGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| 3UTR CAA 72 bp | TTCCTTCGGTCAGTTCATCTGCACATTATGGCTTCCTaGGGGAAGGACGTCTTTACCAAGTTCAGTGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FLRSVHLHIMAS*GKDVFTKFSVQ Trigger: TTGGACACTGAACTTGGTAAAGACGTCCTTCCCCAAGGAAGCCATAATGTGCAGATGAACTGACCGAAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS-3UTR CCA 90 bp | TCGGTTAAAACCCTTAATACTGAACCTTTTGAGGCTTCATGGTGGCGTCTTGTGCCTCCTCACGGAACTTaGGATTTGAACTGTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SVKTLNTEPFEASWWRLVPPHGT*DLNCSR Trigger: TCTGGAACAGTTCAAATCCCAAGTTCCGTGAGGAGG...CACAAGACGCCACCATGAAGCCTCAAAAGGTTCAGTATTAAGGGTTTTAACCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029566.9 ENSMUST00000118860.2 |
||
| CDS-3UTR TCA 90 bp | TCGGTTAAAACCCTTAATACTGAACCTTTTGAGGCTTCATGGTGGCGTCTTGTGACGGAACTTGGGATTTaGACTGTTCCAGAAGACGAT | + |
|
Preference number: 4 (lower is better) Translates to: SVKTLNTEPFEASWWRLVTELGI*TVPEDD Trigger: ATCGTCTTCTGGAACAGTTCAAATCCCAAGTTCCGT...CACAAGACGCCACCATGAAGCCTCAAAAGGTTCAGTATTAAGGGTTTTAACCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029566.9 ENSMUST00000118860.2 |
||
| CDS CCA 90 bp | TCCGGGCCATGCTTGGCACTGGGCCGGTTGCAATTCCAACGGACCTaGTCCTTGGACTGGGGTTGGCATGCCACATACTCCTGGTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SGPCLALGRLQFQRT*SLDWGWHATYSWCS Trigger: GGAACACCAGGAGTATGTGGCATGCCAACCCCAGTCCAAGGACCAGGTCCGTTGGAATTGCAACCGGCCCAGTGCCAAGCATGGCCCGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS-3UTR CAA 90 bp | TCTGTACCTGGCTCCCCCGCAGGAAGCTGTCTCAAGCTTTTCCTTCGGTCAGTTTTCTCCGGGCCATGCTaGGCACTGGGCCGGTTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: SVPGSPAGSCLKLFLRSVFSGPC*ALGRLQ Trigger: TTGCAACCGGCCCAGTGCCAAGCATGGCCCGGAGAA...AACTGACCGAAGGAAAAGCTTGAGACAGCTTCCTGCGGGGGAGCCAGGTACAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS GCA 90 bp | AAAGGCGTGAAGCGCTGGAATTTCTCAGACAGCTTCTCCGGGCCATaGTTGGCACTGGGCCGGTTGCAATTCCAACGGACCTGGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KGVKRWNFSDSFSGP*LALGRLQFQRTWSL Trigger: CAAGGACCAGGTCCGTTGGAATTGCAACCGGCCCAGTGCCAAGCATGGCCCGGAGAAGCTGTCTGAGAAATTCCAGCGCTTCACGCCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| CDS CCA 90 bp | CATGCTTGGCACTGGGCCGGTTGCAATTCCAACGGACCTGGTCCTTaGACTGGGGTTGGCATGCCACATACTCCTGGTGTTCCACCATGT | + |
|
Preference number: 5 (lower is better) Translates to: HAWHWAGCNSNGPGP*TGVGMPHTPGVPPC Trigger: ACATGGTGGAACACCAGGAGTATGTGGCATGCCAACCCCAGTCCAAGGACCAGGTCCGTTGGAATTGCAACCGGCCCAGTGCCAAGCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS-3UTR CAA 90 bp | TTCAGTGTCCAACCGCATGACCTCAGGCTCTTTTTAGCCCTTCTCCCACTGAGGTTCTCCGGGCCATGCTaGGCACTGGGCCGGTTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: FSVQPHDLRLFLALLPLRFSGPC*ALGRLQ Trigger: TTGCAACCGGCCCAGTGCCAAGCATGGCCCGGAGAA...CCTCAGTGGGAGAAGGGCTAAAAAGAGCCTGAGGTCATGCGGTTGGACACTGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS CCA 90 bp | TTGGCACTGGGCCGGTTGCAATTCCAACGGACCTGGTCCTTGGACTaGGGTTGGCATGCCACATACTCCTGGTGTTCCACCATGTACAGT | + |
|
Preference number: 5 (lower is better) Translates to: LALGRLQFQRTWSLD*GWHATYSWCSTMYS Trigger: ACTGTACATGGTGGAACACCAGGAGTATGTGGCATGCCAACCCCAGTCCAAGGACCAGGTCCGTTGGAATTGCAACCGGCCCAGTGCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS-3UTR CAA 90 bp | TGCCTCTTCTGTACCTGGCTCCCCCGCAGGAAGCTGTCTCAAGCTTTTCCTTCGTTCCGGGTCATCTGCTaGGAGTCTCTTCTCCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: CLFCTWLPRRKLSQAFPSFRVIC*ESLLLW Trigger: CCACAGGAGAAGAGACTCCAAGCAGATGACCCGGAA...CGAAGGAAAAGCTTGAGACAGCTTCCTGCGGGGGAGCCAGGTACAGAAGAGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS GCA 90 bp | CCGGTTGCAATTCCAACGGACCTGGTCCTTGGACTGGGGTTGGCATaGCACATACTCCTGGTGTTCCACCATGTACAGTGTGTATCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PVAIPTDLVLGLGLA*HILLVFHHVQCVSL Trigger: GAGCGATACACACTGTACATGGTGGAACACCAGGAGTATGTGGCATGCCAACCCCAGTCCAAGGACCAGGTCCGTTGGAATTGCAACCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS CCA 90 bp | CAACGGACCTGGTCCTTGGACTGGGGTTGGCATGCCACATACTCCTaGTGTTCCACCATGTACAGTGTGTATCGCTCCATGGCTGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: QRTWSLDWGWHATYS*CSTMYSVYRSMAAS Trigger: AGATGCAGCCATGGAGCGATACACACTGTACATGGTGGAACACCAGGAGTATGTGGCATGCCAACCCCAGTCCAAGGACCAGGTCCGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029566.9 ENSMUST00000118860.2 |
||
| CDS CCA 90 bp | CTGGGCCGGTTGCAATTCCAACGGACCTGGTCCTTGGACTGGGGTTaGCATGCCACATACTCCTGGTGTTCCACCATGTACAGTGTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: LGRLQFQRTWSLDWG*HATYSWCSTMYSVY Trigger: ATACACACTGTACATGGTGGAACACCAGGAGTATGTGGCATGCCAACCCCAGTCCAAGGACCAGGTCCGTTGGAATTGCAACCGGCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS-3UTR CAA 90 bp | CCCTCTGAAGTGGAGGCAGGGATGGCACAGTTGGGCTGGTTAAACTCTTTTCGGCTCTTCTCCTGTGGGTaGACATGGGCCTGGGGATTA | + |
|
Preference number: 5 (lower is better) Translates to: PSEVEAGMAQLGWLNSFRLFSCG*TWAWGL Trigger: TAATCCCCAGGCCCATGTCAACCCACAGGAGAAGAG...CCGAAAAGAGTTTAACCAGCCCAACTGTGCCATCCCTGCCTCCACTTCAGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS-3UTR CAA 90 bp | CCCTCTGAAGTGGAGGCAGGGATGGCACAGTTGGGCTGGTTAAACTCTTTTCGGTTCCGGGTCATCTGCTaGGAGTCTCTTCTCCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PSEVEAGMAQLGWLNSFRFRVIC*ESLLLW Trigger: CCACAGGAGAAGAGACTCCAAGCAGATGACCCGGAA...CCGAAAAGAGTTTAACCAGCCCAACTGTGCCATCCCTGCCTCCACTTCAGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS-3UTR CAA 90 bp | CTGTACACACGGGCACTGCCCTTACAGCTACACTCTAAAACCAGGCTGCTTCAGCTCTTCTCCTGTGGGTaGACATGGGCCTGGGGATTA | + |
|
Preference number: 5 (lower is better) Translates to: LYTRALPLQLHSKTRLLQLFSCG*TWAWGL Trigger: TAATCCCCAGGCCCATGTCAACCCACAGGAGAAGAG...CTGAAGCAGCCTGGTTTTAGAGTGTAGCTGTAAGGGCAGTGCCCGTGTGTACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS GCA 90 bp | GGCACTGTAACCAATGCTGTGCAAAACCTGTACTTCCGGGTCATCTaGTTGGAGTCTCTTCTCCTGTGGGTTGACATGGGCCTGGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: GTVTNAVQNLYFRVI*LESLLLWVDMGLGI Trigger: AATCCCCAGGCCCATGTCAACCCACAGGAGAAGAGACTCCAAGCAGATGACCCGGAAGTACAGGTTTTGCACAGCATTGGTTACAGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS-3UTR CAA 90 bp | TGCCTCTTCTGTACCTGGCTCCCCCGCAGGAAGCTGTCTCAAGCTTTTCCTTCGCACGGAACTTGGGATTaGAACTGTTCCAGAAGACGA | + |
|
Preference number: 5 (lower is better) Translates to: CLFCTWLPRRKLSQAFPSHGTWD*NCSRRR Trigger: TCGTCTTCTGGAACAGTTCAAATCCCAAGTTCCGTG...CGAAGGAAAAGCTTGAGACAGCTTCCTGCGGGGGAGCCAGGTACAGAAGAGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029566.9 ENSMUST00000118860.2 |
||
| CDS-3UTR CAA 90 bp | AGTGTCCAACCGCATGACCTCAGGCTCTTTTTAGCCCTTCTCCCACTGAGGCCTTCCTCCTCACGGAACTaGGGATTTGAACTGTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SVQPHDLRLFLALLPLRPSSSRN*GFELFQ Trigger: CTGGAACAGTTCAAATCCCAAGTTCCGTGAGGAGGA...AGGCCTCAGTGGGAGAAGGGCTAAAAAGAGCCTGAGGTCATGCGGTTGGACACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029566.9 ENSMUST00000118860.2 |
||
| CDS-3UTR CAA 90 bp | CTGCACATTATGGCTTCCTTGGGGAAGGACGTCTTTACCAAGTTCAGTGTCCAATTGGCACTGGGCCGGTaGCAATTCCAACGGACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LHIMASLGKDVFTKFSVQLALGR*QFQRTW Trigger: CCAGGTCCGTTGGAATTGCAACCGGCCCAGTGCCAA...TTGGACACTGAACTTGGTAAAGACGTCCTTCCCCAAGGAAGCCATAATGTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS-3UTR CAA 90 bp | TCTCAAGCTTTTCCTTCGGTCAGTTCATCTGCACATTATGGCTTCCTTGGGGAATTCTCCGGGCCATGCTaGGCACTGGGCCGGTTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: SQAFPSVSSSAHYGFLGEFSGPC*ALGRLQ Trigger: TTGCAACCGGCCCAGTGCCAAGCATGGCCCGGAGAA...TTCCCCAAGGAAGCCATAATGTGCAGATGAACTGACCGAAGGAAAAGCTTGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| CDS GCA 90 bp | ATACTCCTGGTGTTCCACCATGTACAGTGTGTATCGCTCCATGGCTaGATCTGCCACAGAGTCGTCCTCGTAATGTGGGCAGATGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: ILLVFHHVQCVSLHG*ICHRVVLVMWADDV Trigger: GACATCATCTGCCCACATTACGAGGACGACTCTGTGGCAGATGCAGCCATGGAGCGATACACACTGTACATGGTGGAACACCAGGAGTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029566.9 ENSMUST00000118860.2 |
||
| CDS-3UTR CAA 90 bp | GCACATTATGGCTTCCTTGGGGAAGGACGTCTTTACCAAGTTCAGTGTCCAACCTTCCGGGTCATCTGCTaGGAGTCTCTTCTCCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: AHYGFLGEGRLYQVQCPTFRVIC*ESLLLW Trigger: CCACAGGAGAAGAGACTCCAAGCAGATGACCCGGAA...GGTTGGACACTGAACTTGGTAAAGACGTCCTTCCCCAAGGAAGCCATAATGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| CDS-3UTR CAA 90 bp | AAGTTCAGTGTCCAACCGCATGACCTCAGGCTCTTTTTAGCCCTTCTCCCACTGCCTTCCTTGAACTCCTaGCCCAAGATAAAAGGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: KFSVQPHDLRLFLALLPLPSLNS*PKIKGV Trigger: CACGCCTTTTATCTTGGGCAAGGAGTTCAAGGAAGG...CAGTGGGAGAAGGGCTAAAAAGAGCCTGAGGTCATGCGGTTGGACACTGAACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| CDS-3UTR CAA 90 bp | GTGGAGGCAGGGATGGCACAGTTGGGCTGGTTAAACTCTTTTCGGTTAAAACCCCCTTCCTTGAACTCCTaGCCCAAGATAAAAGGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: VEAGMAQLGWLNSFRLKPPSLNS*PKIKGV Trigger: CACGCCTTTTATCTTGGGCAAGGAGTTCAAGGAAGG...GGGTTTTAACCGAAAAGAGTTTAACCAGCCCAACTGTGCCATCCCTGCCTCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| CDS-3UTR CAA 90 bp | ACCCTTAATACTGAACCTTTTGAGGCTTCATGGTGGCGTCTTGTGGGTGTAGTGCTCTTCTCCTGTGGGTaGACATGGGCCTGGGGATTA | + |
|
Preference number: 5 (lower is better) Translates to: TLNTEPFEASWWRLVGVVLFSCG*TWAWGL Trigger: TAATCCCCAGGCCCATGTCAACCCACAGGAGAAGAG...CACTACACCCACAAGACGCCACCATGAAGCCTCAAAAGGTTCAGTATTAAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| CDS CCA 90 bp | CAAAACCTGTACTTCCGGGTCATCTGCTTGGAGTCTCTTCTCCTGTaGGTTGACATGGGCCTGGGGATTATGAGAGATGTAGTAGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: QNLYFRVICLESLLL*VDMGLGIMRDVVVA Trigger: AGCTACTACTACATCTCTCATAATCCCCAGGCCCATGTCAACCCACAGGAGAAGAGACTCCAAGCAGATGACCCGGAAGTACAGGTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118860.2 |
||
| CDS-3UTR CAA 90 bp | CTGCACATTATGGCTTCCTTGGGGAAGGACGTCTTTACCAAGTTCAGTGTCCAATCCTCCTCACGGAACTaGGGATTTGAACTGTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LHIMASLGKDVFTKFSVQSSSRN*GFELFQ Trigger: CTGGAACAGTTCAAATCCCAAGTTCCGTGAGGAGGA...TTGGACACTGAACTTGGTAAAGACGTCCTTCCCCAAGGAAGCCATAATGTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029566.9 ENSMUST00000118860.2 |
||
| CDS-3UTR CAA 90 bp | ACCCTTAATACTGAACCTTTTGAGGCTTCATGGTGGCGTCTTGTGGGTGTAGTGCACGGAACTTGGGATTaGAACTGTTCCAGAAGACGA | + |
|
Preference number: 5 (lower is better) Translates to: TLNTEPFEASWWRLVGVVHGTWD*NCSRRR Trigger: TCGTCTTCTGGAACAGTTCAAATCCCAAGTTCCGTG...CACTACACCCACAAGACGCCACCATGAAGCCTCAAAAGGTTCAGTATTAAGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029566.9 ENSMUST00000118860.2 |
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| CDS GCA 72 bp | ACAGCTTCTCCGGGCCATGCTTGGCACTGGGCCGGTTaGAATTCCAACGGACCTGGTCCTTGGACTGGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: TASPGHAWHWAG*NSNGPGPWTGV Trigger: AACCCCAGTCCAAGGACCAGGTCCGTTGGAATTGCAACCGGCCCAGTGCCAAGCATGGCCCGGAGAAGCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| CDS CAA 90 bp | GGCGTGAAGCGCTGGAATTTCTCAGACAGCTTCTCCGGGCCATGCTaGGCACTGGGCCGGTTGCAATTCCAACGGACCTGGTCCTTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: GVKRWNFSDSFSGPC*ALGRLQFQRTWSLD Trigger: GTCCAAGGACCAGGTCCGTTGGAATTGCAACCGGCCCAGTGCCAAGCATGGCCCGGAGAAGCTGTCTGAGAAATTCCAGCGCTTCACGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| CDS CCA 72 bp | GGCCGGTTGCAATTCCAACGGACCTGGTCCTTGGACTaGGGTTGGCATGCCACATACTCCTGGTGTTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: GRLQFQRTWSLD*GWHATYSWCST Trigger: GGTGGAACACCAGGAGTATGTGGCATGCCAACCCCAGTCCAAGGACCAGGTCCGTTGGAATTGCAACCGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| CDS CCA 72 bp | TGCTTGGCACTGGGCCGGTTGCAATTCCAACGGACCTaGTCCTTGGACTGGGGTTGGCATGCCACATACTCC | + |
|
Preference number: 6 (lower is better) Translates to: CLALGRLQFQRT*SLDWGWHATYS Trigger: GGAGTATGTGGCATGCCAACCCCAGTCCAAGGACCAGGTCCGTTGGAATTGCAACCGGCCCAGTGCCAAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS CAA 72 bp | GCACTGGGCCGGTTGCAATTCCAACGGACCTGGTCCTaGGACTGGGGTTGGCATGCCACATACTCCTGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: ALGRLQFQRTWS*DWGWHATYSWC Trigger: ACACCAGGAGTATGTGGCATGCCAACCCCAGTCCAAGGACCAGGTCCGTTGGAATTGCAACCGGCCCAGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS CAA 72 bp | CGCTGGAATTTCTCAGACAGCTTCTCCGGGCCATGCTaGGCACTGGGCCGGTTGCAATTCCAACGGACCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RWNFSDSFSGPC*ALGRLQFQRTW Trigger: CCAGGTCCGTTGGAATTGCAACCGGCCCAGTGCCAAGCATGGCCCGGAGAAGCTGTCTGAGAAATTCCAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| CDS CAA 90 bp | CCATGCTTGGCACTGGGCCGGTTGCAATTCCAACGGACCTGGTCCTaGGACTGGGGTTGGCATGCCACATACTCCTGGTGTTCCACCATG | + |
|
Preference number: 6 (lower is better) Translates to: PCLALGRLQFQRTWS*DWGWHATYSWCSTM Trigger: CATGGTGGAACACCAGGAGTATGTGGCATGCCAACCCCAGTCCAAGGACCAGGTCCGTTGGAATTGCAACCGGCCCAGTGCCAAGCATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS GCA 72 bp | AAGCGCTGGAATTTCTCAGACAGCTTCTCCGGGCCATaGTTGGCACTGGGCCGGTTGCAATTCCAACGGACC | + |
|
Preference number: 6 (lower is better) Translates to: KRWNFSDSFSGP*LALGRLQFQRT Trigger: GGTCCGTTGGAATTGCAACCGGCCCAGTGCCAAGCATGGCCCGGAGAAGCTGTCTGAGAAATTCCAGCGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS CCA 72 bp | CACTGGGCCGGTTGCAATTCCAACGGACCTGGTCCTTaGACTGGGGTTGGCATGCCACATACTCCTGGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: HWAGCNSNGPGP*TGVGMPHTPGV Trigger: AACACCAGGAGTATGTGGCATGCCAACCCCAGTCCAAGGACCAGGTCCGTTGGAATTGCAACCGGCCCAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| CDS CAA 90 bp | ACTGGGCCGGTTGCAATTCCAACGGACCTGGTCCTTGGACTGGGGTaGGCATGCCACATACTCCTGGTGTTCCACCATGTACAGTGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: TGPVAIPTDLVLGLG*ACHILLVFHHVQCV Trigger: TACACACTGTACATGGTGGAACACCAGGAGTATGTGGCATGCCAACCCCAGTCCAAGGACCAGGTCCGTTGGAATTGCAACCGGCCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS TCA 72 bp | GTGCACCGTGTAGTCCTCCTCACGGAACTTGGGATTTaGACTGTTCCAGAAGACGATGTGGCGGTCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VHRVVLLTELGI*TVPEDDVAVSS Trigger: GCTGCTGACCGCCACATCGTCTTCTGGAACAGTTCAAATCCCAAGTTCCGTGAGGAGGACTACACGGTGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029566.9 ENSMUST00000118860.2 |
||
| CDS CCA 72 bp | GCTGCACGTGCACCGTGTAGTCCTCCTCACGGAACTTaGGATTTGAACTGTTCCAGAAGACGATGTGGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: AARAPCSPPHGT*DLNCSRRRCGG Trigger: ACCGCCACATCGTCTTCTGGAACAGTTCAAATCCCAAGTTCCGTGAGGAGGACTACACGGTGCACGTGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029566.9 ENSMUST00000118860.2 |
||
| CDS CAA 72 bp | CGTGCACCGTGTAGTCCTCCTCACGGAACTTGGGATTaGAACTGTTCCAGAAGACGATGTGGCGGTCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RAPCSPPHGTWD*NCSRRRCGGQQ Trigger: CTGCTGACCGCCACATCGTCTTCTGGAACAGTTCAAATCCCAAGTTCCGTGAGGAGGACTACACGGTGCACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029566.9 ENSMUST00000118860.2 |
||
| CDS TCA 72 bp | CATCTGCCACAGAGTCGTCCTCGTAATGTGGGCAGATaGTGTCTAGGTAGTCATTCAGCTGCACGTGCACCG | + |
|
Preference number: 6 (lower is better) Translates to: HLPQSRPRNVGR*CLGSHSAARAP Trigger: CGGTGCACGTGCAGCTGAATGACTACCTAGACATCATCTGCCCACATTACGAGGACGACTCTGTGGCAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029566.9 ENSMUST00000118860.2 |
||
| CDS GCA 72 bp | GTGTTCCACCATGTACAGTGTGTATCGCTCCATGGCTaGATCTGCCACAGAGTCGTCCTCGTAATGTGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: VFHHVQCVSLHG*ICHRVVLVMWA Trigger: TGCCCACATTACGAGGACGACTCTGTGGCAGATGCAGCCATGGAGCGATACACACTGTACATGGTGGAACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029566.9 ENSMUST00000118860.2 |
||
| CDS GCA 72 bp | ATTCCAACGGACCTGGTCCTTGGACTGGGGTTGGCATaGCACATACTCCTGGTGTTCCACCATGTACAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: IPTDLVLGLGLA*HILLVFHHVQC Trigger: ACACTGTACATGGTGGAACACCAGGAGTATGTGGCATGCCAACCCCAGTCCAAGGACCAGGTCCGTTGGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS CCA 72 bp | TGGTCCTTGGACTGGGGTTGGCATGCCACATACTCCTaGTGTTCCACCATGTACAGTGTGTATCGCTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: WSLDWGWHATYS*CSTMYSVYRSM Trigger: CATGGAGCGATACACACTGTACATGGTGGAACACCAGGAGTATGTGGCATGCCAACCCCAGTCCAAGGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029566.9 ENSMUST00000118860.2 |
||
| CDS CCA 72 bp | ATGCTGTGCAAAACCTGTACTTCCGGGTCATCTGCTTaGAGTCTCTTCTCCTGTGGGTTGACATGGGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: MLCKTCTSGSSA*SLFSCGLTWAW Trigger: CCAGGCCCATGTCAACCCACAGGAGAAGAGACTCCAAGCAGATGACCCGGAAGTACAGGTTTTGCACAGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
||
| CDS CAA 72 bp | GTTGCAATTCCAACGGACCTGGTCCTTGGACTGGGGTaGGCATGCCACATACTCCTGGTGTTCCACCATGTA | + |
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Preference number: 6 (lower is better) Translates to: VAIPTDLVLGLG*ACHILLVFHHV Trigger: TACATGGTGGAACACCAGGAGTATGTGGCATGCCAACCCCAGTCCAAGGACCAGGTCCGTTGGAATTGCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| CDS GCA 72 bp | CACCATGTACAGTGTGTATCGCTCCATGGCTGCATCTaGCACAGAGTCGTCCTCGTAATGTGGGCAGATGAT | + |
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Preference number: 6 (lower is better) Translates to: HHVQCVSLHGCI*HRVVLVMWADD Trigger: ATCATCTGCCCACATTACGAGGACGACTCTGTGGCAGATGCAGCCATGGAGCGATACACACTGTACATGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029566.9 ENSMUST00000118860.2 |
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| CDS GCA 72 bp | ACCAATGCTGTGCAAAACCTGTACTTCCGGGTCATCTaGTTGGAGTCTCTTCTCCTGTGGGTTGACATGGGC | + |
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Preference number: 6 (lower is better) Translates to: TNAVQNLYFRVI*LESLLLWVDMG Trigger: GCCCATGTCAACCCACAGGAGAAGAGACTCCAAGCAGATGACCCGGAAGTACAGGTTTTGCACAGCATTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| CDS CAA 72 bp | AATGCTGTGCAAAACCTGTACTTCCGGGTCATCTGCTaGGAGTCTCTTCTCCTGTGGGTTGACATGGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: NAVQNLYFRVIC*ESLLLWVDMGL Trigger: CAGGCCCATGTCAACCCACAGGAGAAGAGACTCCAAGCAGATGACCCGGAAGTACAGGTTTTGCACAGCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| CDS CCA 72 bp | TTGAACTCCTTGCCCAAGATAAAAGGCGTGAAGCGCTaGAATTTCTCAGACAGCTTCTCCGGGCCATGCTTG | + |
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Preference number: 6 (lower is better) Translates to: LNSLPKIKGVKR*NFSDSFSGPCL Trigger: CAAGCATGGCCCGGAGAAGCTGTCTGAGAAATTCCAGCGCTTCACGCCTTTTATCTTGGGCAAGGAGTTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 ENSMUST00000118860.2 |
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| CDS CCA 72 bp | TACTTCCGGGTCATCTGCTTGGAGTCTCTTCTCCTGTaGGTTGACATGGGCCTGGGGATTATGAGAGATGTA | + |
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Preference number: 6 (lower is better) Translates to: YFRVICLESLLL*VDMGLGIMRDV Trigger: TACATCTCTCATAATCCCCAGGCCCATGTCAACCCACAGGAGAAGAGACTCCAAGCAGATGACCCGGAAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118860.2 |
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| CDS CCA 72 bp | TACTTCCGGGTCATCTGCTTGGAGTCTCTTCTCCTGTaGGTTGACATGGGCCTGGGGATTATGAGTGATTTT | + |
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Preference number: 6 (lower is better) Translates to: YFRVICLESLLL*VDMGLGIMSDF Trigger: AAAATCACTCATAATCCCCAGGCCCATGTCAACCCACAGGAGAAGAGACTCCAAGCAGATGACCCGGAAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029566.9 ENSMUST00000118587.8 |
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