Pregenerated sensors for EFHD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026255Ensembl transcript IDs: ENSMUST00000027472.7, ENSMUST00000118687.8
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AACAGCAGAGGGGTGAAGGCTGGAAAGGCTGGCTGGCAAACCGTTTaGAAGGGACCAGGACCCTCCAGGGTGTTAGTAAGGCACAGCCGC | + |
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Preference number: 1 (lower is better) Translates to: NSRGVKAGKAGWQTV*KGPGPSRVLVRHSR Trigger: GCGGCTGTGCCTTACTAACACCCTGGAGGGTCCTGGTCCCTTCCAAACGGTTTGCCAGCCAGCCTTTCCAGCCTTCACCCCTCTGCTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118687.8 |
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| 3UTR CCA 90 bp | AACAGCAGAGGGGTGAAGGCTGGAAAGGCTGGCTGGCAAACCGTTTaGAAGGGACCAGGACCCTGGGAAGGACGAAAGCAAGTTACTGGT | + |
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Preference number: 1 (lower is better) Translates to: NSRGVKAGKAGWQTV*KGPGPWEGRKQVTG Trigger: ACCAGTAACTTGCTTTCGTCCTTCCCAGGGTCCTGGTCCCTTCCAAACGGTTTGCCAGCCAGCCTTTCCAGCCTTCACCCCTCTGCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027472.7 |
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| 3UTR CCA 90 bp | GAATCTACAGATAACAGCAGAGGGGTGAAGGCTGGAAAGGCTGGCTaGCAAACCGTTTGGAAGGGACCAGGACCCTCCAGGGTGTTAGTA | + |
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Preference number: 1 (lower is better) Translates to: ESTDNSRGVKAGKAG*QTVWKGPGPSRVLV Trigger: TACTAACACCCTGGAGGGTCCTGGTCCCTTCCAAACGGTTTGCCAGCCAGCCTTTCCAGCCTTCACCCCTCTGCTGTTATCTGTAGATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118687.8 |
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| 3UTR CCA 90 bp | ACGATTCTCTCATTCTTAACAGTAAAGAACTTAGGAGTGGGAAAATaGCTGGACTGGGAAATGAACGAGGGGGAACAAGAGGGTAGGCAT | + |
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Preference number: 1 (lower is better) Translates to: TILSFLTVKNLGVGK*LDWEMNEGEQEGRH Trigger: ATGCCTACCCTCTTGTTCCCCCTCGTTCATTTCCCAGTCCAGCCATTTTCCCACTCCTAAGTTCTTTACTGTTAAGAATGAGAGAATCGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| 3UTR TCA 90 bp | AGAAGTCAATGGAATCTGGGTAATAACAAGAAGGCAGACAGACGCTaGCCAGGAAACAATACAAGGAACACAAAGGAAAAACTACCCGGG | + |
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Preference number: 1 (lower is better) Translates to: RSQWNLGNNKKADRR*PGNNTRNTKEKLPG Trigger: CCCGGGTAGTTTTTCCTTTGTGTTCCTTGTATTGTTTCCTGGTCAGCGTCTGTCTGCCTTCTTGTTATTACCCAGATTCCATTGACTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| 3UTR TCA 90 bp | CACTTGAGAGTTTCACAGGTCCACTCTGATTTGAATGGGGTCGGGTaGCAGCTATCCTTCTACTCACTAATATTACTTCTGACGATTCTC | + |
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Preference number: 1 (lower is better) Translates to: HLRVSQVHSDLNGVG*QLSFYSLILLLTIL Trigger: GAGAATCGTCAGAAGTAATATTAGTGAGTAGAAGGATAGCTGTCACCCGACCCCATTCAAATCAGAGTGGACCTGTGAAACTCTCAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| 3UTR TCA 90 bp | TTCAAAAGACCTTGGATGTCACTTGAGAGTTTCACAGGTCCACTCTaGTTTGAATGGGGTCGGGTGACAGCTATCCTTCTACTCACTAAT | + |
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Preference number: 1 (lower is better) Translates to: FKRPWMSLESFTGPL*FEWGRVTAILLLTN Trigger: ATTAGTGAGTAGAAGGATAGCTGTCACCCGACCCCATTCAAATCAGAGTGGACCTGTGAAACTCTCAAGTGACATCCAAGGTCTTTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| 3UTR CCA 90 bp | CATCACACTAGCGTGGAAGACGGTGAAAAAGAAGTCAATGGAATCTaGGTAATAACAAGAAGGCAGACAGACGCTGACCAGGAAACAATA | + |
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Preference number: 1 (lower is better) Translates to: HHTSVEDGEKEVNGI*VITRRQTDADQETI Trigger: TATTGTTTCCTGGTCAGCGTCTGTCTGCCTTCTTGTTATTACCCAGATTCCATTGACTTCTTTTTCACCGTCTTCCACGCTAGTGTGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| 3UTR CCA 90 bp | TTTGTGAGAAGTCCCAAGAAACTCAAGATACAAAAATCTGTCTCATaGGCGAGAATACATTTCTTTCAGTTCTCTGGAACTGTTGTCAGA | + |
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Preference number: 1 (lower is better) Translates to: FVRSPKKLKIQKSVS*ARIHFFQFSGTVVR Trigger: TCTGACAACAGTTCCAGAGAACTGAAAGAAATGTATTCTCGCCCATGAGACAGATTTTTGTATCTTGAGTTTCTTGGGACTTCTCACAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGTGGGAAAATGGCTGGACTGGGAAATGAACGAGGGGGAACAAGAGGGTAGGCAGAGGGGTGAAGGCTaGAAAGGCTGGCTGGCAAAC | + |
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Preference number: 2 (lower is better) Translates to: GVGKWLDWEMNEGEQEGRQRGEG*KGWLAN Trigger: GTTTGCCAGCCAGCCTTTCCAGCCTTCACCCCTCTG...CCTACCCTCTTGTTCCCCCTCGTTCATTTCCCAGTCCAGCCATTTTCCCACTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| 3UTR-3UTR TCA 90 bp | CTTGGATGTCACTTGAGAGTTTCACAGGTCCACTCTGATTTGAATGGGGTCGGGGGCTGGACTGGGAAATaGACGAGGGGGAACAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: LGCHLRVSQVHSDLNGVGGWTGK*TRGNKR Trigger: CCTCTTGTTCCCCCTCGTTCATTTCCCAGTCCAGCC...CCCGACCCCATTCAAATCAGAGTGGACCTGTGAAACTCTCAAGTGACATCCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| 3UTR-3UTR CCA 90 bp | GTATTGATCCACAAGTGCTCCTTCAAATCCCATCATCACACTAGCGTGGAAGACGCTGGAAAGGCTGGCTaGCAAACCGTTTGGAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: VLIHKCSFKSHHHTSVEDAGKAG*QTVWKG Trigger: TCCCTTCCAAACGGTTTGCCAGCCAGCCTTTCCAGC...GTCTTCCACGCTAGTGTGATGATGGGATTTGAAGGAGCACTTGTGGATCAATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| 3UTR-3UTR CCA 90 bp | TCATTCTTAACAGTAAAGAACTTAGGAGTGGGAAAATGGCTGGACTGGGAAATGGGCTGGCAAACCGTTTaGAAGGGACCAGGACCCTGG | + |
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Preference number: 2 (lower is better) Translates to: SFLTVKNLGVGKWLDWEMGWQTV*KGPGPW Trigger: CCAGGGTCCTGGTCCCTTCCAAACGGTTTGCCAGCC...CATTTCCCAGTCCAGCCATTTTCCCACTCCTAAGTTCTTTACTGTTAAGAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027472.7 |
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| 3UTR-3UTR CCA 90 bp | AAAGACCTTGGATGTCACTTGAGAGTTTCACAGGTCCACTCTGATTTGAATGGGGCTGGAAAGGCTGGCTaGCAAACCGTTTGGAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: KDLGCHLRVSQVHSDLNGAGKAG*QTVWKG Trigger: TCCCTTCCAAACGGTTTGCCAGCCAGCCTTTCCAGC...CCCATTCAAATCAGAGTGGACCTGTGAAACTCTCAAGTGACATCCAAGGTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCTGACGATTCTCTCATTCTTAACAGTAAAGAACTTAGGAGTGGGAAAATGGGGCTGGCAAACCGTTTaGAAGGGACCAGGACCCTCC | + |
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Preference number: 2 (lower is better) Translates to: LLTILSFLTVKNLGVGKWGWQTV*KGPGPS Trigger: GGAGGGTCCTGGTCCCTTCCAAACGGTTTGCCAGCC...CCATTTTCCCACTCCTAAGTTCTTTACTGTTAAGAATGAGAGAATCGTCAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118687.8 |
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| 3UTR-3UTR TCA 90 bp | TACAAAAATCTGTCTCATGGGCGAGAATACATTTCTTTCAGTTCTCTGGAACTGTTCACAGGTCCACTCTaGTTTGAATGGGGTCGGGTG | + |
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Preference number: 2 (lower is better) Translates to: YKNLSHGREYISFSSLELFTGPL*FEWGRV Trigger: CACCCGACCCCATTCAAATCAGAGTGGACCTGTGAA...CAGTTCCAGAGAACTGAAAGAAATGTATTCTCGCCCATGAGACAGATTTTTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| 3UTR-3UTR CCA 90 bp | AGTCCCAAGAAACTCAAGATACAAAAATCTGTCTCATGGGCGAGAATACATTTCAAGGGACCAGGACCCTaGGAAGGACGAAAGCAAGTT | + |
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Preference number: 2 (lower is better) Translates to: SPKKLKIQKSVSWARIHFKGPGP*EGRKQV Trigger: AACTTGCTTTCGTCCTTCCCAGGGTCCTGGTCCCTT...GAAATGTATTCTCGCCCATGAGACAGATTTTTGTATCTTGAGTTTCTTGGGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027472.7 |
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| 3UTR-3UTR CCA 90 bp | AAGAAACTCAAGATACAAAAATCTGTCTCATGGGCGAGAATACATTTCTTTCAGCAGAGGGGTGAAGGCTaGAAAGGCTGGCTGGCAAAC | + |
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Preference number: 2 (lower is better) Translates to: KKLKIQKSVSWARIHFFQQRGEG*KGWLAN Trigger: GTTTGCCAGCCAGCCTTTCCAGCCTTCACCCCTCTG...CTGAAAGAAATGTATTCTCGCCCATGAGACAGATTTTTGTATCTTGAGTTTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| 3UTR-3UTR CCA 90 bp | CCCAAGAAACTCAAGATACAAAAATCTGTCTCATGGGCGAGAATACATTTCTTTTTAGGAGTGGGAAAATaGCTGGACTGGGAAATGAAC | + |
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Preference number: 2 (lower is better) Translates to: PKKLKIQKSVSWARIHFFLGVGK*LDWEMN Trigger: GTTCATTTCCCAGTCCAGCCATTTTCCCACTCCTAA...AAAGAAATGTATTCTCGCCCATGAGACAGATTTTTGTATCTTGAGTTTCTTGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| 3UTR CAA 90 bp | ATACATTTCTTTCAGTTCTCTGGAACTGTTGTCAGACACGGGAATTaGGTCATGATTTCAAAAGACCTTGGATGTCACTTGAGAGTTTCA | + |
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Preference number: 2 (lower is better) Translates to: IHFFQFSGTVVRHGN*VMISKDLGCHLRVS Trigger: TGAAACTCTCAAGTGACATCCAAGGTCTTTTGAAATCATGACCAAATTCCCGTGTCTGACAACAGTTCCAGAGAACTGAAAGAAATGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| 3UTR-3UTR CCA 90 bp | AAGAAACTCAAGATACAAAAATCTGTCTCATGGGCGAGAATACATTTCTTTCAGAAATGTGAAAAATCCTaGTCATCACCTCCAGGGTGT | + |
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Preference number: 2 (lower is better) Translates to: KKLKIQKSVSWARIHFFQKCEKS*SSPPGC Trigger: ACACCCTGGAGGTGATGACCAGGATTTTTCACATTT...CTGAAAGAAATGTATTCTCGCCCATGAGACAGATTTTTGTATCTTGAGTTTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027472.7 |
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| 3UTR-3UTR CCA 90 bp | ATACAAAAATCTGTCTCATGGGCGAGAATACATTTCTTTCAGTTCTCTGGAACTGAAGTCAATGGAATCTaGGTAATAACAAGAAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: IQKSVSWARIHFFQFSGTEVNGI*VITRRQ Trigger: CTGCCTTCTTGTTATTACCCAGATTCCATTGACTTC...AGTTCCAGAGAACTGAAAGAAATGTATTCTCGCCCATGAGACAGATTTTTGTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| 3UTR-3UTR CCA 90 bp | AAGATACAAAAATCTGTCTCATGGGCGAGAATACATTTCTTTCAGTTCTCTGGAGATTTCAAAAGACCTTaGATGTCACTTGAGAGTTTC | + |
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Preference number: 2 (lower is better) Translates to: KIQKSVSWARIHFFQFSGDFKRP*MSLESF Trigger: GAAACTCTCAAGTGACATCCAAGGTCTTTTGAAATC...TCCAGAGAACTGAAAGAAATGTATTCTCGCCCATGAGACAGATTTTTGTATCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| 3UTR CCA 72 bp | GGGGTGAAGGCTGGAAAGGCTGGCTGGCAAACCGTTTaGAAGGGACCAGGACCCTGGGAAGGACGAAAGCAA | + |
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Preference number: 3 (lower is better) Translates to: GVKAGKAGWQTV*KGPGPWEGRKQ Trigger: TTGCTTTCGTCCTTCCCAGGGTCCTGGTCCCTTCCAAACGGTTTGCCAGCCAGCCTTTCCAGCCTTCACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027472.7 |
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| 3UTR CCA 72 bp | GGGGTGAAGGCTGGAAAGGCTGGCTGGCAAACCGTTTaGAAGGGACCAGGACCCTCCAGGGTGTTAGTAAGG | + |
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Preference number: 3 (lower is better) Translates to: GVKAGKAGWQTV*KGPGPSRVLVR Trigger: CCTTACTAACACCCTGGAGGGTCCTGGTCCCTTCCAAACGGTTTGCCAGCCAGCCTTTCCAGCCTTCACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118687.8 |
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| 3UTR TCA 72 bp | GGTTATCCAGAAGCACTAAGAAACAGGCCTGGGCCGTaGAGGGGAGGTCATCTGAGCAGAGGGCTGCAGGGA | + |
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Preference number: 3 (lower is better) Translates to: GYPEALRNRPGP*RGGHLSRGLQG Trigger: TCCCTGCAGCCCTCTGCTCAGATGACCTCCCCTTCACGGCCCAGGCCTGTTTCTTAGTGCTTCTGGATAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027472.7 |
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| 3UTR CCA 72 bp | GGGACCAGGACCCTGGGAAGGACGAAAGCAAGTTACTaGTTATCCAGAAGCACTAAGAAACAGGCCTGGGCC | + |
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Preference number: 3 (lower is better) Translates to: GTRTLGRTKASY*LSRSTKKQAWA Trigger: GGCCCAGGCCTGTTTCTTAGTGCTTCTGGATAACCAGTAACTTGCTTTCGTCCTTCCCAGGGTCCTGGTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027472.7 |
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| 3UTR CCA 72 bp | GCTGGCTGGCAAACCGTTTGGAAGGGACCAGGACCCTaGGAAGGACGAAAGCAAGTTACTGGTTATCCAGAA | + |
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Preference number: 3 (lower is better) Translates to: AGWQTVWKGPGP*EGRKQVTGYPE Trigger: TTCTGGATAACCAGTAACTTGCTTTCGTCCTTCCCAGGGTCCTGGTCCCTTCCAAACGGTTTGCCAGCCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027472.7 |
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| 3UTR TCA 72 bp | CCTTGGATGTCACTTGAGAGTTTCACAGGTCCACTCTaGTTTGAATGGGGTCGGGTGACAGCTATCCTTCTA | + |
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Preference number: 3 (lower is better) Translates to: PWMSLESFTGPL*FEWGRVTAILL Trigger: TAGAAGGATAGCTGTCACCCGACCCCATTCAAATCAGAGTGGACCTGTGAAACTCTCAAGTGACATCCAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| 3UTR TCA 72 bp | AGGTCATCTGAGCAGAGGGCTGCAGGGATAAAAATGTaGAAAATCCTGGTCATCACCTCCAGGGTGTTAGTA | + |
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Preference number: 3 (lower is better) Translates to: RSSEQRAAGIKM*KILVITSRVLV Trigger: TACTAACACCCTGGAGGTGATGACCAGGATTTTTCACATTTTTATCCCTGCAGCCCTCTGCTCAGATGACCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027472.7 |
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| 3UTR TCA 72 bp | CAAACTAGTCCCTGGTTGGTGAGGGGATATTGGTATTaGTCCACAAGTGCTCCTTCAAATCCCATCATCACA | + |
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Preference number: 3 (lower is better) Translates to: QTSPWLVRGYWY*STSAPSNPIIT Trigger: TGTGATGATGGGATTTGAAGGAGCACTTGTGGATCAATACCAATATCCCCTCACCAACCAGGGACTAGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| 3UTR CCA 72 bp | ACAAGTGCTCCTTCAAATCCCATCATCACACTAGCGTaGAAGACGGTGAAAAAGAAGTCAATGGAATCTGGG | + |
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Preference number: 3 (lower is better) Translates to: TSAPSNPIITLA*KTVKKKSMESG Trigger: CCCAGATTCCATTGACTTCTTTTTCACCGTCTTCCACGCTAGTGTGATGATGGGATTTGAAGGAGCACTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| 3UTR CCA 72 bp | TCATTCTTAACAGTAAAGAACTTAGGAGTGGGAAAATaGCTGGACTGGGAAATGAACGAGGGGGAACAAGAG | + |
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Preference number: 3 (lower is better) Translates to: SFLTVKNLGVGK*LDWEMNEGEQE Trigger: CTCTTGTTCCCCCTCGTTCATTTCCCAGTCCAGCCATTTTCCCACTCCTAAGTTCTTTACTGTTAAGAATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| 3UTR CCA 72 bp | TGTCTCATGGGCGAGAATACATTTCTTTCAGTTCTCTaGAACTGTTGTCAGACACGGGAATTTGGTCATGAT | + |
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Preference number: 3 (lower is better) Translates to: CLMGENTFLSVL*NCCQTREFGHD Trigger: ATCATGACCAAATTCCCGTGTCTGACAACAGTTCCAGAGAACTGAAAGAAATGTATTCTCGCCCATGAGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| 3UTR TCA 72 bp | TGGAATCTGGGTAATAACAAGAAGGCAGACAGACGCTaGCCAGGAAACAATACAAGGAACACAAAGGAAAAA | + |
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Preference number: 3 (lower is better) Translates to: WNLGNNKKADRR*PGNNTRNTKEK Trigger: TTTTTCCTTTGTGTTCCTTGTATTGTTTCCTGGTCAGCGTCTGTCTGCCTTCTTGTTATTACCCAGATTCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| 3UTR-3UTR CAA 90 bp | AAGAAACTCAAGATACAAAAATCTGTCTCATGGGCGAGAATACATTTCTTTCAGGTTGGTGAGGGGATATaGGTATTGATCCACAAGTGC | + |
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Preference number: 3 (lower is better) Translates to: KKLKIQKSVSWARIHFFQVGEGI*VLIHKC Trigger: GCACTTGTGGATCAATACCAATATCCCCTCACCAAC...CTGAAAGAAATGTATTCTCGCCCATGAGACAGATTTTTGTATCTTGAGTTTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| 3UTR CCA 72 bp | AGTCCCAAGAAACTCAAGATACAAAAATCTGTCTCATaGGCGAGAATACATTTCTTTCAGTTCTCTGGAACT | + |
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Preference number: 3 (lower is better) Translates to: SPKKLKIQKSVS*ARIHFFQFSGT Trigger: AGTTCCAGAGAACTGAAAGAAATGTATTCTCGCCCATGAGACAGATTTTTGTATCTTGAGTTTCTTGGGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| CDS-3UTR GCA 90 bp | TGGTTATCCAGAAGCACTAAGAAACAGGCCTGGGCCGTGAAGGGGAGGTCATCTTGGGGCATCGCAGGGTaGAGGCTGGGGGTCGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: WLSRSTKKQAWAVKGRSSWGIAG*RLGVAL Trigger: CAGGGCGACCCCCAGCCTGCACCCTGCGATGCCCCA...AGATGACCTCCCCTTCACGGCCCAGGCCTGTTTCTTAGTGCTTCTGGATAACCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027472.7 |
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| CDS-3UTR GCA 90 bp | CTTGGATGTCACTTGAGAGTTTCACAGGTCCACTCTGATTTGAATGGGGTCGGGGGTTCAGGCTCCGGGTaGCCGGCTGGGGCATCGCAG | + |
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Preference number: 4 (lower is better) Translates to: LGCHLRVSQVHSDLNGVGGSGSG*PAGASQ Trigger: CTGCGATGCCCCAGCCGGGCACCCGGAGCCTGAACC...CCCGACCCCATTCAAATCAGAGTGGACCTGTGAAACTCTCAAGTGACATCCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| 3UTR CAA 72 bp | AGGGGTGAAGGCTGGAAAGGCTGGCTGGCAAACCGTTaGGAAGGGACCAGGACCCTCCAGGGTGTTAGTAAG | + |
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Preference number: 4 (lower is better) Translates to: RGEGWKGWLANR*EGTRTLQGVSK Trigger: CTTACTAACACCCTGGAGGGTCCTGGTCCCTTCCAAACGGTTTGCCAGCCAGCCTTTCCAGCCTTCACCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118687.8 |
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| CDS-3UTR GCA 90 bp | ACAGACGCTGACCAGGAAACAATACAAGGAACACAAAGGAAAAACTACCCGGGGACCGGCGCTGCAGCTTaGAGGCCAGCTCCTCGCTGG | + |
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Preference number: 4 (lower is better) Translates to: TDADQETIQGTQRKNYPGTGAAA*RPAPRW Trigger: CCAGCGAGGAGCTGGCCTGCAAGCTGCAGCGCCGGT...CCCCGGGTAGTTTTTCCTTTGTGTTCCTTGTATTGTTTCCTGGTCAGCGTCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| CDS-3UTR TCA 90 bp | AGAAGAAACGAATCTACAGATAACAGCAGAGGGGTGAAGGCTGGAAAGGCTGGCGCCTGCGGCTCAGCTTaGGGTTCAGTTCGGAGTCCG | + |
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Preference number: 4 (lower is better) Translates to: RRNESTDNSRGVKAGKAGACGSA*GSVRSP Trigger: CGGACTCCGAACTGAACCTCAAGCTGAGCCGCAGGC...GCCAGCCTTTCCAGCCTTCACCCCTCTGCTGTTATCTGTAGATTCGTTTCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| CDS-3UTR TCA 90 bp | AGGAAACAATACAAGGAACACAAAGGAAAAACTACCCGGGGCCGACAGGCAACATCAGGAGGCGGCGGCTaGACTCCGGGAACTCGGTGT | + |
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Preference number: 4 (lower is better) Translates to: RKQYKEHKGKTTRGRQATSGGGG*TPGTRC Trigger: ACACCGAGTTCCCGGAGTTCAGCCGCCGCCTCCTGA...TGTTGCCTGTCGGCCCCGGGTAGTTTTTCCTTTGTGTTCCTTGTATTGTTTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| CDS-3UTR CCA 90 bp | ACTGTTGTCAGACACGGGAATTTGGTCATGATTTCAAAAGACCTTGGATGTCACAGTCCGCGCTGGCTGTaGGCGCCCGGGCAGGCGGTT | + |
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Preference number: 4 (lower is better) Translates to: TVVRHGNLVMISKDLGCHSPRWL*APGQAV Trigger: AACCGCCTGCCCGGGCGCCCACAGCCAGCGCGGACT...GTGACATCCAAGGTCTTTTGAAATCATGACCAAATTCCCGTGTCTGACAACAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| CDS-3UTR GCA 90 bp | GTCAGACACGGGAATTTGGTCATGATTTCAAAAGACCTTGGATGTCACTTGAGATGGGGCATCGCAGGGTaGAGGCTGGGGGTCGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: VRHGNLVMISKDLGCHLRWGIAG*RLGVAL Trigger: CAGGGCGACCCCCAGCCTGCACCCTGCGATGCCCCA...TCTCAAGTGACATCCAAGGTCTTTTGAAATCATGACCAAATTCCCGTGTCTGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| CDS-3UTR CCA 90 bp | GATTCTCTCATTCTTAACAGTAAAGAACTTAGGAGTGGGAAAATGGCTGGACTGAGTCCGCGCTGGCTGTaGGCGCCCGGGCAGGCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: DSLILNSKELRSGKMAGLSPRWL*APGQAV Trigger: AACCGCCTGCCCGGGCGCCCACAGCCAGCGCGGACT...CAGTCCAGCCATTTTCCCACTCCTAAGTTCTTTACTGTTAAGAATGAGAGAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
||
| CDS-3UTR TCA 90 bp | AAGGAACACAAAGGAAAAACTACCCGGGGCCGACAGGCAACATGTCCTCTGAGAGAACTTACTGGAACATaGCAAGGCCTGGGCCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KEHKGKTTRGRQATCPLRELTGT*QGLGLG Trigger: GCCAAGGCCCAGGCCTTGTCATGTTCCAGTAAGTTC...TCTCAGAGGACATGTTGCCTGTCGGCCCCGGGTAGTTTTTCCTTTGTGTTCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
||
| CDS-3UTR GCA 90 bp | GACCTTGGATGTCACTTGAGAGTTTCACAGGTCCACTCTGATTTGAATGGGGTCAACCCACTGTCCTCCTaGAGCTCACCAGCAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: DLGCHLRVSQVHSDLNGVNPLSS*SSPAAA Trigger: GGCTGCTGCTGGTGAGCTGCAGGAGGACAGTGGGTT...GACCCCATTCAAATCAGAGTGGACCTGTGAAACTCTCAAGTGACATCCAAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
||
| CDS-3UTR CCA 90 bp | TCATTCTTAACAGTAAAGAACTTAGGAGTGGGAAAATGGCTGGACTGGGAAATGTCGCAGGGTGCAGGCTaGGGGTCGCCCTGGTCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SFLTVKNLGVGKWLDWEMSQGAG*GSPWSV Trigger: GACCGACCAGGGCGACCCCCAGCCTGCACCCTGCGA...CATTTCCCAGTCCAGCCATTTTCCCACTCCTAAGTTCTTTACTGTTAAGAATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
||
| CDS-3UTR CCA 90 bp | CTTAGGAGTGGGAAAATGGCTGGACTGGGAAATGAACGAGGGGGAACAAGAGGGCCAGCAGCAGCCTTGTaGAAAATGAGCAGGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LRSGKMAGLGNERGGTRGPAAAL*KMSRNS Trigger: GGAGTTCCTGCTCATTTTCCACAAGGCTGCTGCTGG...CCCTCTTGTTCCCCCTCGTTCATTTCCCAGTCCAGCCATTTTCCCACTCCTAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| CDS-3UTR TCA 90 bp | ACTGTTGTCAGACACGGGAATTTGGTCATGATTTCAAAAGACCTTGGATGTCACTCAGGAGGCGGCGGCTaGACTCCGGGAACTCGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TVVRHGNLVMISKDLGCHSGGGG*TPGTRC Trigger: ACACCGAGTTCCCGGAGTTCAGCCGCCGCCTCCTGA...GTGACATCCAAGGTCTTTTGAAATCATGACCAAATTCCCGTGTCTGACAACAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| CDS-3UTR CCA 90 bp | TACAAAAATCTGTCTCATGGGCGAGAATACATTTCTTTCAGTTCTCTGGAACTGTCGCAGGGTGCAGGCTaGGGGTCGCCCTGGTCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: YKNLSHGREYISFSSLELSQGAG*GSPWSV Trigger: GACCGACCAGGGCGACCCCCAGCCTGCACCCTGCGA...CAGTTCCAGAGAACTGAAAGAAATGTATTCTCGCCCATGAGACAGATTTTTGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTTGTCAGACACGGGAATTTGGTCATGATTTCAAAAGACCTTGGATGTCACCGCGCTGTACCCTGGTaGATGTCCAGCCTGCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TVVRHGNLVMISKDLGCHRAVPW*MSSLRL Trigger: GAGCCGCAGGCTGGACATCCACCAGGGTACAGCGCG...GTGACATCCAAGGTCTTTTGAAATCATGACCAAATTCCCGTGTCTGACAACAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
||
| CDS-3UTR GCA 90 bp | TGGAACTGTTGTCAGACACGGGAATTTGGTCATGATTTCAAAAGACCTTGGATGAACCCACTGTCCTCCTaGAGCTCACCAGCAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: WNCCQTREFGHDFKRPWMNPLSS*SSPAAA Trigger: GGCTGCTGCTGGTGAGCTGCAGGAGGACAGTGGGTT...CATCCAAGGTCTTTTGAAATCATGACCAAATTCCCGTGTCTGACAACAGTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
||
| CDS-3UTR GCA 90 bp | AAGAAACTCAAGATACAAAAATCTGTCTCATGGGCGAGAATACATTTCTTTCAGACCGGCGCTGCAGCTTaGAGGCCAGCTCCTCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KKLKIQKSVSWARIHFFQTGAAA*RPAPRW Trigger: CCAGCGAGGAGCTGGCCTGCAAGCTGCAGCGCCGGT...CTGAAAGAAATGTATTCTCGCCCATGAGACAGATTTTTGTATCTTGAGTTTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
||
| CDS-3UTR TCA 90 bp | ACTGTTGTCAGACACGGGAATTTGGTCATGATTTCAAAAGACCTTGGATGTCACCAGCCTTGTGGAAAATaGGCAGGAACTCCCGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TVVRHGNLVMISKDLGCHQPCGK*AGTPGS Trigger: GCTTCCGGGAGTTCCTGCTCATTTTCCACAAGGCTG...GTGACATCCAAGGTCTTTTGAAATCATGACCAAATTCCCGTGTCTGACAACAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
||
| CDS-3UTR TCA 90 bp | ACTGTTGTCAGACACGGGAATTTGGTCATGATTTCAAAAGACCTTGGATGTCACAGTTCTTGGCACCTCTaGCACCTTCCAGGGCGACAT | + |
|
Preference number: 4 (lower is better) Translates to: TVVRHGNLVMISKDLGCHSSWHL*HLPGRH Trigger: ATGTCGCCCTGGAAGGTGTCAGAGGTGCCAAGAACT...GTGACATCCAAGGTCTTTTGAAATCATGACCAAATTCCCGTGTCTGACAACAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
||
| CDS-3UTR TCA 90 bp | CTTAACAGTAAAGAACTTAGGAGTGGGAAAATGGCTGGACTGGGAAATGAACGAGAACTTACTGGAACATaGCAAGGCCTGGGCCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LNSKELRSGKMAGLGNERELTGT*QGLGLG Trigger: GCCAAGGCCCAGGCCTTGTCATGTTCCAGTAAGTTC...TCGTTCATTTCCCAGTCCAGCCATTTTCCCACTCCTAAGTTCTTTACTGTTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
||
| CDS-3UTR TCA 90 bp | AAGAAACTCAAGATACAAAAATCTGTCTCATGGGCGAGAATACATTTCTTTCAGGCCTGCGGCTCAGCTTaGGGTTCAGTTCGGAGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: KKLKIQKSVSWARIHFFQACGSA*GSVRSP Trigger: CGGACTCCGAACTGAACCTCAAGCTGAGCCGCAGGC...CTGAAAGAAATGTATTCTCGCCCATGAGACAGATTTTTGTATCTTGAGTTTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
||
| CDS-3UTR CCA 90 bp | GTCAGACACGGGAATTTGGTCATGATTTCAAAAGACCTTGGATGTCACTTGAGACCAGCAGCAGCCTTGTaGAAAATGAGCAGGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: VRHGNLVMISKDLGCHLRPAAAL*KMSRNS Trigger: GGAGTTCCTGCTCATTTTCCACAAGGCTGCTGCTGG...TCTCAAGTGACATCCAAGGTCTTTTGAAATCATGACCAAATTCCCGTGTCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
||
| CDS-3UTR TCA 90 bp | AAGATACAAAAATCTGTCTCATGGGCGAGAATACATTTCTTTCAGTTCTCTGGACAGCCTTGTGGAAAATaGGCAGGAACTCCCGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KIQKSVSWARIHFFQFSGQPCGK*AGTPGS Trigger: GCTTCCGGGAGTTCCTGCTCATTTTCCACAAGGCTG...TCCAGAGAACTGAAAGAAATGTATTCTCGCCCATGAGACAGATTTTTGTATCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
||
| CDS-3UTR TCA 90 bp | CCCAAGAAACTCAAGATACAAAAATCTGTCTCATGGGCGAGAATACATTTCTTTAGTTCTTGGCACCTCTaGCACCTTCCAGGGCGACAT | + |
|
Preference number: 4 (lower is better) Translates to: PKKLKIQKSVSWARIHFFSSWHL*HLPGRH Trigger: ATGTCGCCCTGGAAGGTGTCAGAGGTGCCAAGAACT...AAAGAAATGTATTCTCGCCCATGAGACAGATTTTTGTATCTTGAGTTTCTTGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| CDS-3UTR CCA 90 bp | CTTCTGACGATTCTCTCATTCTTAACAGTAAAGAACTTAGGAGTGGGAAAATGGACAAGGCCTGGGCCTTaGCTTCGAAGAAGTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLTILSFLTVKNLGVGKWTRPGP*LRRSSW Trigger: CCAAGAACTTCTTCGAAGCCAAGGCCCAGGCCTTGT...CCATTTTCCCACTCCTAAGTTCTTTACTGTTAAGAATGAGAGAATCGTCAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
||
| CDS-3UTR TCA 90 bp | GTCAGACACGGGAATTTGGTCATGATTTCAAAAGACCTTGGATGTCACTTGAGACAGCATCATACGTTTTaGACATCTTCTCCAGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: VRHGNLVMISKDLGCHLRQHHTF*TSSPDP Trigger: AGGATCTGGAGAAGATGTTCAAAACGTATGATGCTG...TCTCAAGTGACATCCAAGGTCTTTTGAAATCATGACCAAATTCCCGTGTCTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| CDS-3UTR GCA 90 bp | ACATTTCTTTCAGTTCTCTGGAACTGTTGTCAGACACGGGAATTTGGTCATGATCGTTTCCGCTCTTCTTaGTCAGCTTTTAACTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TFLSVLWNCCQTREFGHDRFRSS*SAFNSA Trigger: AGCTGAGTTAAAAGCTGAGCAAGAAGAGCGGAAACG...ATCATGACCAAATTCCCGTGTCTGACAACAGTTCCAGAGAACTGAAAGAAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| CDS-3UTR CCA 90 bp | GAAACTCAAGATACAAAAATCTGTCTCATGGGCGAGAATACATTTCTTTCAGTTACAAGGCCTGGGCCTTaGCTTCGAAGAAGTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ETQDTKICLMGENTFLSVTRPGP*LRRSSW Trigger: CCAAGAACTTCTTCGAAGCCAAGGCCCAGGCCTTGT...AACTGAAAGAAATGTATTCTCGCCCATGAGACAGATTTTTGTATCTTGAGTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| 3UTR CAA 72 bp | TTTCAGTTCTCTGGAACTGTTGTCAGACACGGGAATTaGGTCATGATTTCAAAAGACCTTGGATGTCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: FQFSGTVVRHGN*VMISKDLGCHL Trigger: CAAGTGACATCCAAGGTCTTTTGAAATCATGACCAAATTCCCGTGTCTGACAACAGTTCCAGAGAACTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| CDS-3UTR GCA 90 bp | TACAAAAATCTGTCTCATGGGCGAGAATACATTTCTTTCAGTTCTCTGGAACTGCGTTTCCGCTCTTCTTaGTCAGCTTTTAACTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YKNLSHGREYISFSSLELRFRSS*SAFNSA Trigger: AGCTGAGTTAAAAGCTGAGCAAGAAGAGCGGAAACG...CAGTTCCAGAGAACTGAAAGAAATGTATTCTCGCCCATGAGACAGATTTTTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| 3UTR CAA 72 bp | AATTTGGTCATGATTTCAAAAGACCTTGGATGTCACTaGAGAGTTTCACAGGTCCACTCTGATTTGAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: NLVMISKDLGCH*RVSQVHSDLNG Trigger: CCCATTCAAATCAGAGTGGACCTGTGAAACTCTCAAGTGACATCCAAGGTCTTTTGAAATCATGACCAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| CDS CCA 90 bp | GGGTGCCCGGCTGGGGCATCGCAGGGTGCAGGCTGGGGGTCGCCCTaGTCGGTCTCTGCCCGCACCTCAAGTCTCAACCGGCGCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GCPAGASQGAGWGSP*SVSARTSSLNRRCS Trigger: GCTGCAGCGCCGGTTGAGACTTGAGGTGCGGGCAGAGACCGACCAGGGCGACCCCCAGCCTGCACCCTGCGATGCCCCAGCCGGGCACCC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| CDS GCA 90 bp | GCCTGGCGGAGCCTCCGGGCCTCCTCCTCCCGTTTCCGCTCTTCTTaGTCAGCTTTTAACTCAGCTTCGAACTTACTGGAACATGACAAG | + |
|
Preference number: 5 (lower is better) Translates to: AWRSLRASSSRFRSS*SAFNSASNLLEHDK Trigger: CTTGTCATGTTCCAGTAAGTTCGAAGCTGAGTTAAAAGCTGAGCAAGAAGAGCGGAAACGGGAGGAGGAGGCCCGGAGGCTCCGCCAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| CDS-3UTR CAA 90 bp | CTTGGATGTCACTTGAGAGTTTCACAGGTCCACTCTGATTTGAATGGGGTCGGGGCGCTGAAAGCTGCCTaGAGCTCCCGGAAGGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LGCHLRVSQVHSDLNGVGALKAA*SSRKAA Trigger: GGCAGCCTTCCGGGAGCTCAAGGCAGCTTTCAGCGC...CCCGACCCCATTCAAATCAGAGTGGACCTGTGAAACTCTCAAGTGACATCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| CDS-3UTR CAA 90 bp | GTATTGATCCACAAGTGCTCCTTCAAATCCCATCATCACACTAGCGTGGAAGACAACCGGCGCTGCAGCTaGCAGGCCAGCTCCTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VLIHKCSFKSHHHTSVEDNRRCS*QASSSL Trigger: CAGCGAGGAGCTGGCCTGCAAGCTGCAGCGCCGGTT...GTCTTCCACGCTAGTGTGATGATGGGATTTGAAGGAGCACTTGTGGATCAATAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| CDS TCA 90 bp | ATGACAAGGCCTGGGCCTTGGCTTCGAAGAAGTTCTTGGCACCTCTaGCACCTTCCAGGGCGACATCAATCTCGGAAAACTTGGCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: MTRPGPWLRRSSWHL*HLPGRHQSRKTWPV Trigger: CACTGGCCAAGTTTTCCGAGATTGATGTCGCCCTGGAAGGTGTCAGAGGTGCCAAGAACTTCTTCGAAGCCAAGGCCCAGGCCTTGTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| CDS-3UTR CAA 90 bp | GGTCATGATTTCAAAAGACCTTGGATGTCACTTGAGAGTTTCACAGGTCCACTCAACCGGCGCTGCAGCTaGCAGGCCAGCTCCTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GHDFKRPWMSLESFTGPLNRRCS*QASSSL Trigger: CAGCGAGGAGCTGGCCTGCAAGCTGCAGCGCCGGTT...GAGTGGACCTGTGAAACTCTCAAGTGACATCCAAGGTCTTTTGAAATCATGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| CDS-3UTR CAA 90 bp | GGTCATGATTTCAAAAGACCTTGGATGTCACTTGAGAGTTTCACAGGTCCACTCGCGCTGAAAGCTGCCTaGAGCTCCCGGAAGGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GHDFKRPWMSLESFTGPLALKAA*SSRKAA Trigger: GGCAGCCTTCCGGGAGCTCAAGGCAGCTTTCAGCGC...GAGTGGACCTGTGAAACTCTCAAGTGACATCCAAGGTCTTTTGAAATCATGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| CDS CCA 90 bp | TCAGCTTTTAACTCAGCTTCGAACTTACTGGAACATGACAAGGCCTaGGCCTTGGCTTCGAAGAAGTTCTTGGCACCTCTGACACCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SAFNSASNLLEHDKA*ALASKKFLAPLTPS Trigger: GGAAGGTGTCAGAGGTGCCAAGAACTTCTTCGAAGCCAAGGCCCAGGCCTTGTCATGTTCCAGTAAGTTCGAAGCTGAGTTAAAAGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
||
| CDS-3UTR CAA 90 bp | CTTCTGACGATTCTCTCATTCTTAACAGTAAAGAACTTAGGAGTGGGAAAATGGAGCCTGCGGCTCAGCTaGAGGTTCAGTTCGGAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLTILSFLTVKNLGVGKWSLRLS*RFSSES Trigger: GGACTCCGAACTGAACCTCAAGCTGAGCCGCAGGCT...CCATTTTCCCACTCCTAAGTTCTTTACTGTTAAGAATGAGAGAATCGTCAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
||
| CDS-3UTR CAA 90 bp | AAGAAACTCAAGATACAAAAATCTGTCTCATGGGCGAGAATACATTTCTTTCAGAGCCTGCGGCTCAGCTaGAGGTTCAGTTCGGAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KKLKIQKSVSWARIHFFQSLRLS*RFSSES Trigger: GGACTCCGAACTGAACCTCAAGCTGAGCCGCAGGCT...CTGAAAGAAATGTATTCTCGCCCATGAGACAGATTTTTGTATCTTGAGTTTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
||
| CDS-3UTR CAA 90 bp | CTTCTGACGATTCTCTCATTCTTAACAGTAAAGAACTTAGGAGTGGGAAAATGGGACAAGGCCTGGGCCTaGGCTTCGAAGAAGTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLTILSFLTVKNLGVGKWDKAWA*ASKKFL Trigger: CAAGAACTTCTTCGAAGCCAAGGCCCAGGCCTTGTC...CCATTTTCCCACTCCTAAGTTCTTTACTGTTAAGAATGAGAGAATCGTCAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
||
| CDS GCA 72 bp | GCTGTGGGCGCCCGGGCAGGCGGTTCAGGCTCCGGGTaGCCGGCTGGGGCATCGCAGGGTGCAGGCTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: AVGARAGGSGSG*PAGASQGAGWG Trigger: CCCCCAGCCTGCACCCTGCGATGCCCCAGCCGGGCACCCGGAGCCTGAACCGCCTGCCCGGGCGCCCACAGC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
||
| CDS CCA 72 bp | GCGCTGAAAGCTGCCTTGAGCTCCCGGAAGGCTGCCTaGCGGAGCCTCCGGGCCTCCTCCTCCCGTTTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: ALKAALSSRKAA*RSLRASSSRFR Trigger: GCGGAAACGGGAGGAGGAGGCCCGGAGGCTCCGCCAGGCAGCCTTCCGGGAGCTCAAGGCAGCTTTCAGCGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
||
| CDS GCA 72 bp | CTACGCGCTGAAAGCTGCCTTGAGCTCCCGGAAGGCTaGCTGGCGGAGCCTCCGGGCCTCCTCCTCCCGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LRAESCLELPEG*LAEPPGLLLPF Trigger: AAACGGGAGGAGGAGGCCCGGAGGCTCCGCCAGGCAGCCTTCCGGGAGCTCAAGGCAGCTTTCAGCGCGTAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
||
| CDS CCA 72 bp | AAGACCTTAGAGCGGCCCGGCCGCGCTGTACCCTGGTaGATGTCCAGCCTGCGGCTCAGCTTGAGGTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: KTLERPGRAVPW*MSSLRLSLRFS Trigger: ACTGAACCTCAAGCTGAGCCGCAGGCTGGACATCCACCAGGGTACAGCGCGGCCGGGCCGCTCTAAGGTCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
||
| CDS CCA 72 bp | TTGAAGACCTTAGAGCGGCCCGGCCGCGCTGTACCCTaGTGGATGTCCAGCCTGCGGCTCAGCTTGAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LKTLERPGRAVP*WMSSLRLSLRF Trigger: GAACCTCAAGCTGAGCCGCAGGCTGGACATCCACCAGGGTACAGCGCGGCCGGGCCGCTCTAAGGTCTTCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
||
| CDS CAA 72 bp | CTGACACCTTCCAGGGCGACATCAATCTCGGAAAACTaGGCCAGTGCCAGCAACCCACTGTCCTCCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LTPSRATSISEN*ASASNPLSSCS Trigger: GCTGCAGGAGGACAGTGGGTTGCTGGCACTGGCCAAGTTTTCCGAGATTGATGTCGCCCTGGAAGGTGTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
||
| CDS TCA 72 bp | CCTGGGCCTTGGCTTCGAAGAAGTTCTTGGCACCTCTaGCACCTTCCAGGGCGACATCAATCTCGGAAAACT | + |
|
Preference number: 6 (lower is better) Translates to: PGPWLRRSSWHL*HLPGRHQSRKT Trigger: AGTTTTCCGAGATTGATGTCGCCCTGGAAGGTGTCAGAGGTGCCAAGAACTTCTTCGAAGCCAAGGCCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
||
| CDS GCA 72 bp | AGCCTCCGGGCCTCCTCCTCCCGTTTCCGCTCTTCTTaGTCAGCTTTTAACTCAGCTTCGAACTTACTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: SLRASSSRFRSS*SAFNSASNLLE Trigger: TTCCAGTAAGTTCGAAGCTGAGTTAAAAGCTGAGCAAGAAGAGCGGAAACGGGAGGAGGAGGCCCGGAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
||
| CDS CAA 72 bp | GCTTCGAACTTACTGGAACATGACAAGGCCTGGGCCTaGGCTTCGAAGAAGTTCTTGGCACCTCTGACACCT | + |
|
Preference number: 6 (lower is better) Translates to: ASNLLEHDKAWA*ASKKFLAPLTP Trigger: AGGTGTCAGAGGTGCCAAGAACTTCTTCGAAGCCAAGGCCCAGGCCTTGTCATGTTCCAGTAAGTTCGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
||
| CDS CAA 90 bp | TTTAACTCAGCTTCGAACTTACTGGAACATGACAAGGCCTGGGCCTaGGCTTCGAAGAAGTTCTTGGCACCTCTGACACCTTCCAGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: FNSASNLLEHDKAWA*ASKKFLAPLTPSRA Trigger: CGCCCTGGAAGGTGTCAGAGGTGCCAAGAACTTCTTCGAAGCCAAGGCCCAGGCCTTGTCATGTTCCAGTAAGTTCGAAGCTGAGTTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
||
| CDS CCA 72 bp | AACTCAGCTTCGAACTTACTGGAACATGACAAGGCCTaGGCCTTGGCTTCGAAGAAGTTCTTGGCACCTCTG | + |
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Preference number: 6 (lower is better) Translates to: NSASNLLEHDKA*ALASKKFLAPL Trigger: CAGAGGTGCCAAGAACTTCTTCGAAGCCAAGGCCCAGGCCTTGTCATGTTCCAGTAAGTTCGAAGCTGAGTT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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| CDS CAA 72 bp | AGGTCAATAAAGCCGTCCCTTCCAGCATCATACGTTTaGAACATCTTCTCCAGATCCTTCAGGAGGCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: RSIKPSLPASYV*NIFSRSFRRRR Trigger: CCGCCGCCTCCTGAAGGATCTGGAGAAGATGTTCAAAACGTATGATGCTGGAAGGGACGGCTTTATTGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027472.7 ENSMUST00000118687.8 |
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