Pregenerated sensors for EFHC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041809Ensembl transcript IDs: ENSMUST00000038447.6
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGTGAAATAGAAGAGTGGGAAAAGAAATACCACTTCCGGAGTTATTaGAAGGCTTGGGTGGTAGATTTCTCAATGTCGGCTCAGTGTCAA | + |
|
Preference number: 1 (lower is better) Translates to: SEIEEWEKKYHFRSY*KAWVVDFSMSAQCQ Trigger: TTGACACTGAGCCGACATTGAGAAATCTACCACCCAAGCCTTTCAATAACTCCGGAAGTGGTATTTCTTTTCCCACTCTTCTATTTCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR TCA 90 bp | GGTGGTAGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATTCTCTCGGCCAGGGCTTCTGGTaGATACTGGGAAGCGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGRFLNVGSVSKMLSHSLGQGFW*ILGSVA Trigger: AGCAACGCTTCCCAGTATTCACCAGAAGCCCTGGCC...GAGAGAATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCTACCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR TCA 90 bp | GGTGGTAGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATTCTCTCAGCCGTTCCTGTAGTTaGGTGTCTGGCTTCGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GGRFLNVGSVSKMLSHSLSRSCS*VSGFGG Trigger: TCCACCGAAGCCAGACACTCAACTACAGGAACGGCT...GAGAGAATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCTACCACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR TCA 90 bp | GTAGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATTCTCTCGTTCGCGGCTTCCCCACAATaGAGTCCTTGGCAGTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: VDFSMSAQCQKCCRILSFAASPQ*SPWQCT Trigger: GGTACACTGCCAAGGACTTCATTGTGGGGAAGCCGC...GAACGAGAGAATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR CCA 90 bp | GGCTTGGGTGGTAGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATAGATGGGTGCCTTATTaGCCAGTTCATCCAGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GLGGRFLNVGSVSKMLSHRWVPY*PVHPAR Trigger: CCGAGCTGGATGAACTGGCCAATAAGGCACCCATCT...ATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCTACCACCCAAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR TCA 90 bp | AGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATTCTCTCGTTCAGGTTCGTGGACCTCTCTaGTCTCCACGGTGTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: RFLNVGSVSKMLSHSLVQVRGPL*SPRCHP Trigger: TGGATGACACCGTGGAGATCAGAGAGGTCCACGAAC...CTGAACGAGAGAATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR GCA 90 bp | GGTAGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATTCTCTCGTTGGGACGTCGGACAACTaGATAGCCGTTCCTGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GRFLNVGSVSKMLSHSLVGTSDN*IAVPVV Trigger: AACTACAGGAACGGCTATGCAGTTGTCCGACGTCCC...AACGAGAGAATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCTACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR GCA 90 bp | GGTAGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATTCTCTCGTTCGCAGGAACAAACTCTaGAAGTGGGGCTTGCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GRFLNVGSVSKMLSHSLVRRNKL*KWGLLE Trigger: CTCAAGCAAGCCCCACTTGCAGAGTTTGTTCCTGCG...AACGAGAGAATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCTACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR CCA 90 bp | GGTAGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATTCTCTCGTTCCGTGTCGTCCCAGATaGCATAGAATCGAAGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: GRFLNVGSVSKMLSHSLVPCRPR*HRIEGP Trigger: AGGTCCTTCGATTCTATGCCATCTGGGACGACACGG...AACGAGAGAATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCTACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR CCA 90 bp | GTAGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATTCTCTCGTTCCCAAGTCCTGCACCTTaGATTCCTCTGTACCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VDFSMSAQCQKCCRILSFPSPAP*IPLYPA Trigger: TGCAGGGTACAGAGGAATCCAAGGTGCAGGACTTGG...GAACGAGAGAATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR GCA 90 bp | GGCTTGGGTGGTAGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATTTGTCAAAAGCCACATaGGCAGGAACAAACTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLGGRFLNVGSVSKMLSHLSKAT*AGTNSA Trigger: TGCAGAGTTTGTTCCTGCGCATGTGGCTTTTGACAA...ATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCTACCACCCAAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR GCA 90 bp | AGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATTCTCTCGTTCAGGATTCCTCTGTACCCTaGACCATGGGTTCTCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RFLNVGSVSKMLSHSLVQDSSVP*TMGSPV Trigger: TACAGGAGAACCCATGGTGCAGGGTACAGAGGAATC...CTGAACGAGAGAATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR CCA 90 bp | GGTGGTAGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATTCTCTCCAACTCCTGTTTTACTaGAGGTGGCTCCTTCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GGRFLNVGSVSKMLSHSLQLLFY*RWLLLG Trigger: ACCAAGAAGGAGCCACCTCCAGTAAAACAGGAGTTG...GAGAGAATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCTACCACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR CCA 90 bp | GTAGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATTCTCTCGTTCGCTTCTGGTGAATACTaGGAAGCGTTGCTCTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: VDFSMSAQCQKCCRILSFASGEY*EALLSM Trigger: CATGGAGAGCAACGCTTCCCAGTATTCACCAGAAGC...GAACGAGAGAATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR TCA 90 bp | GTAGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATTCTCTCGTTCGAAGAAGTCACTTGGTaGGTAGTAGATGGGGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VDFSMSAQCQKCCRILSFEEVTW*VVDGVV Trigger: GACAACCCCATCTACTACTCACCAAGTGACTTCTTC...GAACGAGAGAATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR GCA 90 bp | TTGAGTAATAGTGAAATAGAAGAGTGGGAAAAGAAATACCACTTCCGGAGTTATGCTTTCCAGTTCTGGTaGGGGAAGCTCCGGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSNSEIEEWEKKYHFRSYAFQFW*GKLRLL Trigger: CAGAAGCCGGAGCTTCCCGCACCAGAACTGGAAAGC...ATAACTCCGGAAGTGGTATTTCTTTTCCCACTCTTCTATTTCACTATTACTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR GCA 90 bp | GTAGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATTCTCTCGTTCGGTTCTCCTGTAGCTTaGTTGCTTTCCAGTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VDFSMSAQCQKCCRILSFGSPVA*LLSSSG Trigger: ACCAGAACTGGAAAGCAAGCAAGCTACAGGAGAACC...GAACGAGAGAATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR CCA 90 bp | GGTAGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATTCTCTCGTTTCTCCACCAAAACTTTaGGCATACGCTGTCGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GRFLNVGSVSKMLSHSLVSPPKL*AYAVGS Trigger: TGAACCGACAGCGTATGCCCAAAGTTTTGGTGGAGA...AACGAGAGAATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCTACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR CCA 90 bp | GGTAGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATTCTCTCGTTCTGTTTTACTGGAGGTaGCTCCTTCTTGGTCACATC | + |
|
Preference number: 4 (lower is better) Translates to: GRFLNVGSVSKMLSHSLVLFYWR*LLLGHI Trigger: GATGTGACCAAGAAGGAGCCACCTCCAGTAAAACAG...AACGAGAGAATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCTACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR TCA 90 bp | AGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATTCTCTCGTTCAGGTGGCTCAAAGATACTaGTCATATCCGTGGCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RFLNVGSVSKMLSHSLVQVAQRY*SYPWQE Trigger: TTCTTGCCACGGATATGATCAGTATCTTTGAGCCAC...CTGAACGAGAGAATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR CCA 90 bp | GTAGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATTCTCTCGTTCGAACTGTCGTGTGAATaGGTCACAGTCGTAGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: VDFSMSAQCQKCCRILSFELSCE*VTVVDE Trigger: TTCATCTACGACTGTGACCCATTCACACGACAGTTC...GAACGAGAGAATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR CCA 90 bp | AGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATTCTCTCGTTCAGTTGGTGAGTAGTAGATaGGGTTGTCAACTGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RFLNVGSVSKMLSHSLVQLVSSR*GCQLER Trigger: TCTCTCCAGTTGACAACCCCATCTACTACTCACCAA...CTGAACGAGAGAATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR TCA 90 bp | TTGAGTAATAGTGAAATAGAAGAGTGGGAAAAGAAATACCACTTCCGGAGTTATCCACTACGGGCTCGATaGCAGACATGCTGTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSNSEIEEWEKKYHFRSYPLRAR*QTCCHL Trigger: AAGATGACAGCATGTCTGTCATCGAGCCCGTAGTGG...ATAACTCCGGAAGTGGTATTTCTTTTCCCACTCTTCTATTTCACTATTACTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR CCA 90 bp | GGCTTGGGTGGTAGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATTATTTCAGGTGCATATaGATTTGGTCTATCAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLGGRFLNVGSVSKMLSHYFRCI*IWSISA Trigger: TGCACTGATAGACCAAATCCATATGCACCTGAAATA...ATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCTACCACCCAAGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR TCA 90 bp | TTGAGTAATAGTGAAATAGAAGAGTGGGAAAAGAAATACCACTTCCGGAGTTATCAGTTGGTCAAAGTCTaGCGGGGTGACATATTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: LSNSEIEEWEKKYHFRSYQLVKV*RGDIFA Trigger: CGCAAATATGTCACCCCGTCAGACTTTGACCAACTG...ATAACTCCGGAAGTGGTATTTCTTTTCCCACTCTTCTATTTCACTATTACTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR TCA 90 bp | GGTGGTAGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATTCTCTCAGAGCAAAACAATTCTaGGCAGAGTCTTCAATTAGT | + |
|
Preference number: 4 (lower is better) Translates to: GGRFLNVGSVSKMLSHSLRAKQF*AESSIS Trigger: ACTAATTGAAGACTCTGCTCAGAATTGTTTTGCTCT...GAGAGAATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCTACCACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR TCA 90 bp | AGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATTCTCTCGTTCAGGAGGTTTTCTTTGCATaGATTGTATTTCAGGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RFLNVGSVSKMLSHSLVQEVFFA*IVFQVH Trigger: ATGCACCTGAAATACAATTCATGCAAAGAAAACCTC...CTGAACGAGAGAATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR TCA 90 bp | GTAGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATTCTCTCGTTCTCCTTGTCATACATTTaGAATGTTTCACGGAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VDFSMSAQCQKCCRILSFSLSYI*NVSRRF Trigger: AAACCTCCGTGAAACATTTCAAATGTATGACAAGGA...GAACGAGAGAATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR GCA 90 bp | TTGAGTAATAGTGAAATAGAAGAGTGGGAAAAGAAATACCACTTCCGGAGTTATAGTGCATCCAAGTCCTaGACCTTGGATTCCTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSNSEIEEWEKKYHFRSYSASKS*TLDSSV Trigger: TACAGAGGAATCCAAGGTGCAGGACTTGGATGCACT...ATAACTCCGGAAGTGGTATTTCTTTTCCCACTCTTCTATTTCACTATTACTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR GCA 90 bp | GGTAGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATTCTCTCGTTCACGGAGGTTTTCTTTaGATGAATTGTATTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GRFLNVGSVSKMLSHSLVHGGFL*MNCISG Trigger: ACCTGAAATACAATTCATGCAAAGAAAACCTCCGTG...AACGAGAGAATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCTACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR CCA 90 bp | AGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATTCTCTCGTTCAGAGAATTTCGAACAGGTaGCTCAAAGATACTGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: RFLNVGSVSKMLSHSLVQRISNR*LKDTDH Trigger: ATGATCAGTATCTTTGAGCCACCTGTTCGAAATTCT...CTGAACGAGAGAATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR GCA 90 bp | AGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATTCTCTCGTTCAGAATACTGGGAAGCGTTaGTCTCCATGTATTTTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RFLNVGSVSKMLSHSLVQNTGKR*SPCILK Trigger: TTTTAAAATACATGGAGAGCAACGCTTCCCAGTATT...CTGAACGAGAGAATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR GCA 90 bp | GTAGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATTCTCTCGTTCGAATTGTATTTCAGGTaGATATGGATTTGGTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: VDFSMSAQCQKCCRILSFELYFR*IWIWSI Trigger: GATAGACCAAATCCATATGCACCTGAAATACAATTC...GAACGAGAGAATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR CCA 90 bp | TTGAGTAATAGTGAAATAGAAGAGTGGGAAAAGAAATACCACTTCCGGAGTTATAGAAACTGTTTCAGTTaGTCAAAGTCTGACGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSNSEIEEWEKKYHFRSYRNCFS*SKSDGV Trigger: CACCCCGTCAGACTTTGACCAACTGAAACAGTTTCT...ATAACTCCGGAAGTGGTATTTCTTTTCCCACTCTTCTATTTCACTATTACTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR TCA 90 bp | TTGAGTAATAGTGAAATAGAAGAGTGGGAAAAGAAATACCACTTCCGGAGTTATCCTGTTTGTCAAAGGTaGGAAACTGTTTCAGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSNSEIEEWEKKYHFRSYPVCQR*ETVSVG Trigger: ACCAACTGAAACAGTTTCTCACCTTTGACAAACAGG...ATAACTCCGGAAGTGGTATTTCTTTTCCCACTCTTCTATTTCACTATTACTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR TCA 90 bp | TTGAGTAATAGTGAAATAGAAGAGTGGGAAAAGAAATACCACTTCCGGAGTTATGTCAACTGGAGAGAATaGTTTAACAACTTTAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSNSEIEEWEKKYHFRSYVNWRE*FNNFSP Trigger: AGGACTAAAGTTGTTAAATCATTCTCTCCAGTTGAC...ATAACTCCGGAAGTGGTATTTCTTTTCCCACTCTTCTATTTCACTATTACTCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS GCA 90 bp | GTGGAGCCGGTCTCCACCTATCCCCATGGTGGGACGTCGGACAACTaGATAGCCGTTCCTGTAGTTGAGTGTCTGGCTTCGGTGGAATGC | + |
|
Preference number: 5 (lower is better) Translates to: VEPVSTYPHGGTSDN*IAVPVVECLASVEC Trigger: GCATTCCACCGAAGCCAGACACTCAACTACAGGAACGGCTATGCAGTTGTCCGACGTCCCACCATGGGGATAGGTGGAGACCGGCTCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS TCA 90 bp | CTTTCCAGTTCTGGTGCGGGAAGCTCCGGCTTCTGGATCCGGTTCTaGATTGAGGCCAGGGCTTCTGGTGAATACTGGGAAGCGTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LSSSGAGSSGFWIRF*IEARASGEYWEALL Trigger: GAGCAACGCTTCCCAGTATTCACCAGAAGCCCTGGCCTCAATTCAGAACCGGATCCAGAAGCCGGAGCTTCCCGCACCAGAACTGGAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS TCA 90 bp | TCTTTGCATTCTCCACCAAAACTTTGGGCATACGCTGTCGGTTCATaGGGAGTGGGAAGGGGTCTCTCCCGTTGTTCCGTTCGTGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: SLHSPPKLWAYAVGS*GVGRGLSRCSVRGP Trigger: AGGTCCACGAACGGAACAACGGGAGAGACCCCTTCCCACTCCTCATGAACCGACAGCGTATGCCCAAAGTTTTGGTGGAGAATGCAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS GCA 90 bp | AACTGCATAGCCGTTCCTGTAGTTGAGTGTCTGGCTTCGGTGGAATaGTGTTTTCGTGGAGTCTGTAAAGGACGAGCCCGGGAGAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: NCIAVPVVECLASVE*CFRGVCKGRAREKG Trigger: CCCTTTCTCCCGGGCTCGTCCTTTACAGACTCCACGAAAACAGCATTCCACCGAAGCCAGACACTCAACTACAGGAACGGCTATGCAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS CCA 90 bp | ATTCTCCACCAAAACTTTGGGCATACGCTGTCGGTTCATGAGGAGTaGGAAGGGGTCTCTCCCGTTGTTCCGTTCGTGGACCTCTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: ILHQNFGHTLSVHEE*EGVSPVVPFVDLSD Trigger: ATCAGAGAGGTCCACGAACGGAACAACGGGAGAGACCCCTTCCCACTCCTCATGAACCGACAGCGTATGCCCAAAGTTTTGGTGGAGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS CCA 90 bp | CGTGGCAAGAAAATAAGAGAAGACAAACCGACGGTCTTTGTCTTCTaGGATAGGGGATTCCAGGGCCGCCAGGTAGCGGAGCACCTTATT | + |
|
Preference number: 5 (lower is better) Translates to: RGKKIREDKPTVFVF*DRGFQGRQVAEHLI Trigger: AATAAGGTGCTCCGCTACCTGGCGGCCCTGGAATCCCCTATCCCAGAAGACAAAGACCGTCGGTTTGTCTTCTCTTATTTTCTTGCCACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS TCA 90 bp | CAAAAGCCACATGCGCAGGAACAAACTCTGCAAGTGGGGCTTGCTTaGGTGGCCCGTAAGTTAAGATGGGTGCCTTATTGGCCAGTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: QKPHAQEQTLQVGLA*VARKLRWVPYWPVH Trigger: ATGAACTGGCCAATAAGGCACCCATCTTAACTTACGGGCCACTCAAGCAAGCCCCACTTGCAGAGTTTGTTCCTGCGCATGTGGCTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS GCA 90 bp | TCTATCAGTGCATCCAAGTCCTGCACCTTGGATTCCTCTGTACCCTaGACCATGGGTTCTCCTGTAGCTTGCTTGCTTTCCAGTTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SISASKSCTLDSSVP*TMGSPVACLLSSSG Trigger: ACCAGAACTGGAAAGCAAGCAAGCTACAGGAGAACCCATGGTGCAGGGTACAGAGGAATCCAAGGTGCAGGACTTGGATGCACTGATAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR CAA 90 bp | GGTGGTAGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATTCTCTCGTGAACCGCTGGCGTTaGATTAGCTTGCCTTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GGRFLNVGSVSKMLSHSLVNRWR*ISLPCG Trigger: CCCACAAGGCAAGCTAATCAAACGCCAGCGGTTCAC...GAGAGAATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCTACCACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR CAA 90 bp | GGTAGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATTCTCTCGTTAAGGGGTCTCTCCCGTaGTTCCGTTCGTGGACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GRFLNVGSVSKMLSHSLVKGSLP*FRSWTS Trigger: AGAGGTCCACGAACGGAACAACGGGAGAGACCCCTT...AACGAGAGAATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCTACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR CAA 90 bp | AGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATTCTCTCGTTCAGGTCCTGCCCAGGAATTaGCCCCCGATGATCCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RFLNVGSVSKMLSHSLVQVLPRN*PPMIPE Trigger: TTCTGGGATCATCGGGGGCAAATTCCTGGGCAGGAC...CTGAACGAGAGAATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR CAA 90 bp | GGTAGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATTCTCTCGTTGGATCCGGTTCTGAATaGAGGCCAGGGCTTCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GRFLNVGSVSKMLSHSLVGSGSE*RPGLLV Trigger: CACCAGAAGCCCTGGCCTCAATTCAGAACCGGATCC...AACGAGAGAATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCTACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR CAA 90 bp | GGCTTGGGTGGTAGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATGGGTTCTCCTGTAGCTaGCTTGCTTTCCAGTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GLGGRFLNVGSVSKMLSHGFSCS*LAFQFW Trigger: CCAGAACTGGAAAGCAAGCAAGCTACAGGAGAACCC...ATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCTACCACCCAAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS TCA 90 bp | TTAGCTTGCCTTGTGGGATCCCAGAGTTCTCCACTACGGGCTCGATaGCAGACATGCTGTCATCTTCTAGGTAGTAGTAAATGTTCACGT | + |
|
Preference number: 5 (lower is better) Translates to: LACLVGSQSSPLRAR*QTCCHLLGSSKCSR Trigger: ACGTGAACATTTACTACTACCTAGAAGATGACAGCATGTCTGTCATCGAGCCCGTAGTGGAGAACTCTGGGATCCCACAAGGCAAGCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR CAA 90 bp | GGTGGTAGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATTCTCTCAAGATGGGTGCCTTATaGGCCAGTTCATCCAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: GGRFLNVGSVSKMLSHSLKMGAL*ASSSSS Trigger: CGAGCTGGATGAACTGGCCAATAAGGCACCCATCTT...GAGAGAATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCTACCACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS TCA 90 bp | GACCTGTTTGTCAAAGGTGAGAAACTGTTTCAGTTGGTCAAAGTCTaGCGGGGTGACATATTTGCGCACAGGTTCTTTCCGGAGTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: DLFVKGEKLFQLVKV*RGDIFAHRFFPELS Trigger: ACTCAACTCCGGAAAGAACCTGTGCGCAAATATGTCACCCCGTCAGACTTTGACCAACTGAAACAGTTTCTCACCTTTGACAAACAGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS CCA 90 bp | CCTGCCCAGGAATTTGCCCCCGATGATCCCAGAATTTCGAACAGGTaGCTCAAAGATACTGATCATATCCGTGGCAAGAAAATAAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PAQEFAPDDPRISNR*LKDTDHIRGKKIRE Trigger: TTCTCTTATTTTCTTGCCACGGATATGATCAGTATCTTTGAGCCACCTGTTCGAAATTCTGGGATCATCGGGGGCAAATTCCTGGGCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR CAA 90 bp | AGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATTCTCTCGTTCAGTGGCGTTTGATTAGCTaGCCTTGTGGGATCCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RFLNVGSVSKMLSHSLVQWRLIS*PCGIPE Trigger: CTCTGGGATCCCACAAGGCAAGCTAATCAAACGCCA...CTGAACGAGAGAATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR CAA 90 bp | GGTGGTAGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATTCTCTCTTCTCCACCAAAACTTaGGGCATACGCTGTCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GGRFLNVGSVSKMLSHSLFSTKT*GIRCRF Trigger: GAACCGACAGCGTATGCCCAAAGTTTTGGTGGAGAA...GAGAGAATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCTACCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS CCA 90 bp | CATTATAAGGAGGCAACTCCTGTTTTACTGGAGGTGGCTCCTTCTTaGTCACATCAACTGGTGGTAAGTCAGGCATTCCAAACTTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: HYKEATPVLLEVAPS*SHQLVVSQAFQTCL Trigger: AAGACAAGTTTGGAATGCCTGACTTACCACCAGTTGATGTGACCAAGAAGGAGCCACCTCCAGTAAAACAGGAGTTGCCTCCTTATAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS TCA 90 bp | GTAGTAGTAAATGTTCACGTGGCGGATTCGGTAATGCTCCTCCATTaGTATGGGAACATCTTCTTGGAAGTAGGCACTAAATTTCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: VVVNVHVADSVMLLH*YGNIFLEVGTKFQH Trigger: GTGCTGAAATTTAGTGCCTACTTCCAAGAAGATGTTCCCATATCAATGGAGGAGCATTACCGAATCCGCCACGTGAACATTTACTACTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR CAA 90 bp | GGTGGTAGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATTCTCTCAATTTCAGCACCTTTTaGTCAAAAGCCACATGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: GGRFLNVGSVSKMLSHSLNFSTF*SKATCA Trigger: TGCGCATGTGGCTTTTGACAAAAAGGTGCTGAAATT...GAGAGAATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCTACCACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR CAA 90 bp | GTAGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATTCTCTCGTTCAATCGAAGGACCTGTTaGTCAAAGGTGAGAAACTGT | + |
|
Preference number: 5 (lower is better) Translates to: VDFSMSAQCQKCCRILSFNRRTC*SKVRNC Trigger: ACAGTTTCTCACCTTTGACAAACAGGTCCTTCGATT...GAACGAGAGAATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR CAA 90 bp | TTGAGTAATAGTGAAATAGAAGAGTGGGAAAAGAAATACCACTTCCGGAGTTATTCTCCTGTAGCTTGCTaGCTTTCCAGTTCTGGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: LSNSEIEEWEKKYHFRSYSPVAC*LSSSGA Trigger: CGCACCAGAACTGGAAAGCAAGCAAGCTACAGGAGA...ATAACTCCGGAAGTGGTATTTCTTTTCCCACTCTTCTATTTCACTATTACTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR CAA 90 bp | TTGAGTAATAGTGAAATAGAAGAGTGGGAAAAGAAATACCACTTCCGGAGTTATACAAACCGACGGTCTTaGTCTTCTGGGATAGGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LSNSEIEEWEKKYHFRSYTNRRS*SSGIGD Trigger: ATCCCCTATCCCAGAAGACAAAGACCGTCGGTTTGT...ATAACTCCGGAAGTGGTATTTCTTTTCCCACTCTTCTATTTCACTATTACTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR CAA 90 bp | AGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATTCTCTCGTTCAGGAATACTGGGAAGCGTaGCTCTCCATGTATTTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: RFLNVGSVSKMLSHSLVQEYWEA*LSMYFK Trigger: TTTAAAATACATGGAGAGCAACGCTTCCCAGTATTC...CTGAACGAGAGAATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR CAA 90 bp | GGTAGATTTCTCAATGTCGGCTCAGTGTCAAAAATGTTGTCGCATTCTCTCGTTTCACGGAGGTTTTCTTaGCATGAATTGTATTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GRFLNVGSVSKMLSHSLVSRRFS*HELYFR Trigger: CCTGAAATACAATTCATGCAAAGAAAACCTCCGTGA...AACGAGAGAATGCGACAACATTTTTGACACTGAGCCGACATTGAGAAATCTACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS-3UTR CAA 90 bp | TTGAGTAATAGTGAAATAGAAGAGTGGGAAAAGAAATACCACTTCCGGAGTTATATCCTTGTCATACATTaGAAATGTTTCACGGAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LSNSEIEEWEKKYHFRSYILVIH*KCFTEV Trigger: AACCTCCGTGAAACATTTCAAATGTATGACAAGGAT...ATAACTCCGGAAGTGGTATTTCTTTTCCCACTCTTCTATTTCACTATTACTCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS CCA 72 bp | GCTGGTTGTAGTGGAGCCGGTCTCCACCTATCCCCATaGTGGGACGTCGGACAACTGCATAGCCGTTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: AGCSGAGLHLSP*WDVGQLHSRSC Trigger: ACAGGAACGGCTATGCAGTTGTCCGACGTCCCACCATGGGGATAGGTGGAGACCGGCTCCACTACAACCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS CAA 90 bp | GGCATACGCTGTCGGTTCATGAGGAGTGGGAAGGGGTCTCTCCCGTaGTTCCGTTCGTGGACCTCTCTGATCTCCACGGTGTCATCCATG | + |
|
Preference number: 6 (lower is better) Translates to: GIRCRFMRSGKGSLP*FRSWTSLISTVSSM Trigger: CATGGATGACACCGTGGAGATCAGAGAGGTCCACGAACGGAACAACGGGAGAGACCCCTTCCCACTCCTCATGAACCGACAGCGTATGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS CAA 90 bp | CCAGTTCTGGTGCGGGAAGCTCCGGCTTCTGGATCCGGTTCTGAATaGAGGCCAGGGCTTCTGGTGAATACTGGGAAGCGTTGCTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: PVLVREAPASGSGSE*RPGLLVNTGKRCSP Trigger: TGGAGAGCAACGCTTCCCAGTATTCACCAGAAGCCCTGGCCTCAATTCAGAACCGGATCCAGAAGCCGGAGCTTCCCGCACCAGAACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS GCA 72 bp | TCCTCTGTACCCTGCACCATGGGTTCTCCTGTAGCTTaGTTGCTTTCCAGTTCTGGTGCGGGAAGCTCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSVPCTMGSPVA*LLSSSGAGSSG Trigger: GCCGGAGCTTCCCGCACCAGAACTGGAAAGCAAGCAAGCTACAGGAGAACCCATGGTGCAGGGTACAGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS CCA 72 bp | GGTTGTAGTGGAGCCGGTCTCCACCTATCCCCATGGTaGGACGTCGGACAACTGCATAGCCGTTCCTGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: GCSGAGLHLSPW*DVGQLHSRSCS Trigger: ACTACAGGAACGGCTATGCAGTTGTCCGACGTCCCACCATGGGGATAGGTGGAGACCGGCTCCACTACAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS CCA 72 bp | AGGAGTGGGAAGGGGTCTCTCCCGTTGTTCCGTTCGTaGACCTCTCTGATCTCCACGGTGTCATCCATGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RSGKGSLPLFRS*TSLISTVSSMR Trigger: CCTCATGGATGACACCGTGGAGATCAGAGAGGTCCACGAACGGAACAACGGGAGAGACCCCTTCCCACTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS CAA 72 bp | TGTCGGTTCATGAGGAGTGGGAAGGGGTCTCTCCCGTaGTTCCGTTCGTGGACCTCTCTGATCTCCACGGTG | + |
|
Preference number: 6 (lower is better) Translates to: CRFMRSGKGSLP*FRSWTSLISTV Trigger: CACCGTGGAGATCAGAGAGGTCCACGAACGGAACAACGGGAGAGACCCCTTCCCACTCCTCATGAACCGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS CAA 72 bp | GTGCGGGAAGCTCCGGCTTCTGGATCCGGTTCTGAATaGAGGCCAGGGCTTCTGGTGAATACTGGGAAGCGT | + |
|
Preference number: 6 (lower is better) Translates to: VREAPASGSGSE*RPGLLVNTGKR Trigger: ACGCTTCCCAGTATTCACCAGAAGCCCTGGCCTCAATTCAGAACCGGATCCAGAAGCCGGAGCTTCCCGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS GCA 72 bp | GTCTCCACCTATCCCCATGGTGGGACGTCGGACAACTaGATAGCCGTTCCTGTAGTTGAGTGTCTGGCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: VSTYPHGGTSDN*IAVPVVECLAS Trigger: CGAAGCCAGACACTCAACTACAGGAACGGCTATGCAGTTGTCCGACGTCCCACCATGGGGATAGGTGGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS CAA 72 bp | TCTGTACCCTGCACCATGGGTTCTCCTGTAGCTTGCTaGCTTTCCAGTTCTGGTGCGGGAAGCTCCGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SVPCTMGSPVAC*LSSSGAGSSGF Trigger: GAAGCCGGAGCTTCCCGCACCAGAACTGGAAAGCAAGCAAGCTACAGGAGAACCCATGGTGCAGGGTACAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS CAA 90 bp | CACCTTGGATTCCTCTGTACCCTGCACCATGGGTTCTCCTGTAGCTaGCTTGCTTTCCAGTTCTGGTGCGGGAAGCTCCGGCTTCTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: HLGFLCTLHHGFSCS*LAFQFWCGKLRLLD Trigger: ATCCAGAAGCCGGAGCTTCCCGCACCAGAACTGGAAAGCAAGCAAGCTACAGGAGAACCCATGGTGCAGGGTACAGAGGAATCCAAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS GCA 72 bp | GCCGTTCCTGTAGTTGAGTGTCTGGCTTCGGTGGAATaGTGTTTTCGTGGAGTCTGTAAAGGACGAGCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: AVPVVECLASVE*CFRGVCKGRAR Trigger: CCGGGCTCGTCCTTTACAGACTCCACGAAAACAGCATTCCACCGAAGCCAGACACTCAACTACAGGAACGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS CCA 72 bp | CAAAACTTTGGGCATACGCTGTCGGTTCATGAGGAGTaGGAAGGGGTCTCTCCCGTTGTTCCGTTCGTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: QNFGHTLSVHEE*EGVSPVVPFVD Trigger: GTCCACGAACGGAACAACGGGAGAGACCCCTTCCCACTCCTCATGAACCGACAGCGTATGCCCAAAGTTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS TCA 72 bp | TGGGACGTCGGACAACTGCATAGCCGTTCCTGTAGTTaGGTGTCTGGCTTCGGTGGAATGCTGTTTTCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: WDVGQLHSRSCS*VSGFGGMLFSW Trigger: CCACGAAAACAGCATTCCACCGAAGCCAGACACTCAACTACAGGAACGGCTATGCAGTTGTCCGACGTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS TCA 72 bp | TCTCCACCAAAACTTTGGGCATACGCTGTCGGTTCATaGGGAGTGGGAAGGGGTCTCTCCCGTTGTTCCGTT | + |
|
Preference number: 6 (lower is better) Translates to: SPPKLWAYAVGS*GVGRGLSRCSV Trigger: AACGGAACAACGGGAGAGACCCCTTCCCACTCCTCATGAACCGACAGCGTATGCCCAAAGTTTTGGTGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS GCA 72 bp | GCATCCAAGTCCTGCACCTTGGATTCCTCTGTACCCTaGACCATGGGTTCTCCTGTAGCTTGCTTGCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: ASKSCTLDSSVP*TMGSPVACLLS Trigger: GGAAAGCAAGCAAGCTACAGGAGAACCCATGGTGCAGGGTACAGAGGAATCCAAGGTGCAGGACTTGGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS TCA 72 bp | CATGCGCAGGAACAAACTCTGCAAGTGGGGCTTGCTTaGGTGGCCCGTAAGTTAAGATGGGTGCCTTATTGG | + |
|
Preference number: 6 (lower is better) Translates to: HAQEQTLQVGLA*VARKLRWVPYW Trigger: CCAATAAGGCACCCATCTTAACTTACGGGCCACTCAAGCAAGCCCCACTTGCAGAGTTTGTTCCTGCGCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS TCA 72 bp | CGAACCGATGGCCGAACACCTCAATCACGGCACCGATaGAGAAGTCACTTGGTGAGTAGTAGATGGGGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: RTDGRTPQSRHR*RSHLVSSRWGC Trigger: ACAACCCCATCTACTACTCACCAAGTGACTTCTTCATCGGTGCCGTGATTGAGGTGTTCGGCCATCGGTTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS CCA 72 bp | GGATTTGGTCTATCAGTGCATCCAAGTCCTGCACCTTaGATTCCTCTGTACCCTGCACCATGGGTTCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GFGLSVHPSPAP*IPLYPAPWVLL Trigger: CAGGAGAACCCATGGTGCAGGGTACAGAGGAATCCAAGGTGCAGGACTTGGATGCACTGATAGACCAAATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS CAA 72 bp | TGGTCTCCCATATCATTCTTGGTGAACCGCTGGCGTTaGATTAGCTTGCCTTGTGGGATCCCAGAGTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: WSPISFLVNRWR*ISLPCGIPEFS Trigger: GGAGAACTCTGGGATCCCACAAGGCAAGCTAATCAAACGCCAGCGGTTCACCAAGAATGATATGGGAGACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS CAA 72 bp | TGGATTTGGTCTATCAGTGCATCCAAGTCCTGCACCTaGGATTCCTCTGTACCCTGCACCATGGGTTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: WIWSISASKSCT*DSSVPCTMGSP Trigger: AGGAGAACCCATGGTGCAGGGTACAGAGGAATCCAAGGTGCAGGACTTGGATGCACTGATAGACCAAATCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS CCA 72 bp | GAGGCAACTCCTGTTTTACTGGAGGTGGCTCCTTCTTaGTCACATCAACTGGTGGTAAGTCAGGCATTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: EATPVLLEVAPS*SHQLVVSQAFQ Trigger: TTGGAATGCCTGACTTACCACCAGTTGATGTGACCAAGAAGGAGCCACCTCCAGTAAAACAGGAGTTGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS TCA 72 bp | CTTGTGGGATCCCAGAGTTCTCCACTACGGGCTCGATaGCAGACATGCTGTCATCTTCTAGGTAGTAGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: LVGSQSSPLRAR*QTCCHLLGSSK Trigger: TTTACTACTACCTAGAAGATGACAGCATGTCTGTCATCGAGCCCGTAGTGGAGAACTCTGGGATCCCACAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS CCA 72 bp | AAAACATACTCATCTGTATCGAGGATGACGAACCGATaGCCGAACACCTCAATCACGGCACCGATGAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: KTYSSVSRMTNR*PNTSITAPMKK Trigger: CTTCTTCATCGGTGCCGTGATTGAGGTGTTCGGCCATCGGTTCGTCATCCTCGATACAGATGAGTATGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS TCA 72 bp | GTCAAAGGTGAGAAACTGTTTCAGTTGGTCAAAGTCTaGCGGGGTGACATATTTGCGCACAGGTTCTTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: VKGEKLFQLVKV*RGDIFAHRFFP Trigger: CGGAAAGAACCTGTGCGCAAATATGTCACCCCGTCAGACTTTGACCAACTGAAACAGTTTCTCACCTTTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS CAA 72 bp | GAGAATGATTTAACAACTTTAGTCCTGCCCAGGAATTaGCCCCCGATGATCCCAGAATTTCGAACAGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: ENDLTTLVLPRN*PPMIPEFRTGG Trigger: GCCACCTGTTCGAAATTCTGGGATCATCGGGGGCAAATTCCTGGGCAGGACTAAAGTTGTTAAATCATTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS TCA 72 bp | AGATGGCATAGAATCGAAGGACCTGTTTGTCAAAGGTaGGAAACTGTTTCAGTTGGTCAAAGTCTGACGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RWHRIEGPVCQR*ETVSVGQSLTG Trigger: CCCCGTCAGACTTTGACCAACTGAAACAGTTTCTCACCTTTGACAAACAGGTCCTTCGATTCTATGCCATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS CCA 72 bp | GAATTTGCCCCCGATGATCCCAGAATTTCGAACAGGTaGCTCAAAGATACTGATCATATCCGTGGCAAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: EFAPDDPRISNR*LKDTDHIRGKK Trigger: TTTCTTGCCACGGATATGATCAGTATCTTTGAGCCACCTGTTCGAAATTCTGGGATCATCGGGGGCAAATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS CAA 90 bp | TCAACTGGAGAGAATGATTTAACAACTTTAGTCCTGCCCAGGAATTaGCCCCCGATGATCCCAGAATTTCGAACAGGTGGCTCAAAGATA | + |
|
Preference number: 6 (lower is better) Translates to: STGENDLTTLVLPRN*PPMIPEFRTGGSKI Trigger: TATCTTTGAGCCACCTGTTCGAAATTCTGGGATCATCGGGGGCAAATTCCTGGGCAGGACTAAAGTTGTTAAATCATTCTCTCCAGTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS TCA 72 bp | AATGTTCACGTGGCGGATTCGGTAATGCTCCTCCATTaGTATGGGAACATCTTCTTGGAAGTAGGCACTAAA | + |
|
Preference number: 6 (lower is better) Translates to: NVHVADSVMLLH*YGNIFLEVGTK Trigger: TTTAGTGCCTACTTCCAAGAAGATGTTCCCATATCAATGGAGGAGCATTACCGAATCCGCCACGTGAACATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS GCA 72 bp | ATTGTATTTCAGGTGCATATGGATTTGGTCTATCAGTaGATCCAAGTCCTGCACCTTGGATTCCTCTGTACC | + |
|
Preference number: 6 (lower is better) Translates to: IVFQVHMDLVYQ*IQVLHLGFLCT Trigger: GGTACAGAGGAATCCAAGGTGCAGGACTTGGATGCACTGATAGACCAAATCCATATGCACCTGAAATACAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||
| CDS GCA 72 bp | TGTCATACATTTGAAATGTTTCACGGAGGTTTTCTTTaGATGAATTGTATTTCAGGTGCATATGGATTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: CHTFEMFHGGFL*MNCISGAYGFG Trigger: ACCAAATCCATATGCACCTGAAATACAATTCATGCAAAGAAAACCTCCGTGAAACATTTCAAATGTATGACA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038447.6 |
||