Pregenerated sensors for EFHB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023931Ensembl transcript IDs: ENSMUST00000024725.5, ENSMUST00000233544.2
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGAGCAGAGATGTCAGATCGAATGGTTGGAACACCGAATATGGGGTaGCACATGGAGGGGACAGCTCCAACCACAGCGTTGATCTCAGAA | + |
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Preference number: 1 (lower is better) Translates to: GAEMSDRMVGTPNMG*HMEGTAPTTALISE Trigger: TTCTGAGATCAACGCTGTGGTTGGAGCTGTCCCCTCCATGTGTCACCCCATATTCGGTGTTCCAACCATTCGATCTGACATCTCTGCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR CCA 90 bp | TGCAACCACGGCTCTCTGGTGGTCCTTCCCACGAAGATATTCATCTaGGCTTCTATAATGGATGAGATCGCCAGCTCCATATTCCTCAGG | + |
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Preference number: 1 (lower is better) Translates to: CNHGSLVVLPTKIFI*ASIMDEIASSIFLR Trigger: CCTGAGGAATATGGAGCTGGCGATCTCATCCATTATAGAAGCCCAGATGAATATCTTCGTGGGAAGGACCACCAGAGAGCCGTGGTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR TCA 90 bp | GCAGAGAGTAAGCATTGCCTTCGTCACCGTAGTTATTCATGTCACTaGCTCGACGAATCCGGGGAGCAGAGATGTCAGATCGAATGGTTG | + |
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Preference number: 1 (lower is better) Translates to: AESKHCLRHRSYSCH*LDESGEQRCQIEWL Trigger: CAACCATTCGATCTGACATCTCTGCTCCCCGGATTCGTCGAGTCAGTGACATGAATAACTACGGTGACGAAGGCAATGCTTACTCTCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR TCA 90 bp | GCTCCAACCACAGCGTTGATCTCAGAAGACGTTGTCTTATACTGGTaGGAAACTTTGTCACCTGGTCTCTGGATTGTCCGGAGAGTCTCT | + |
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Preference number: 1 (lower is better) Translates to: APTTALISEDVVLYW*ETLSPGLWIVRRVS Trigger: AGAGACTCTCCGGACAATCCAGAGACCAGGTGACAAAGTTTCTCACCAGTATAAGACAACGTCTTCTGAGATCAACGCTGTGGTTGGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR GCA 90 bp | GTCAAAGTTCTGGTGATTAAATTTCTTCAAGTGGTGGCGAGCAGCTaGAACCACGGCTCTCTGGTGGTCCTTCCCACGAAGATATTCATC | + |
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Preference number: 1 (lower is better) Translates to: VKVLVIKFLQVVASS*NHGSLVVLPTKIFI Trigger: GATGAATATCTTCGTGGGAAGGACCACCAGAGAGCCGTGGTTGCAGCTGCTCGCCACCACTTGAAGAAATTTAATCACCAGAACTTTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR CCA 90 bp | AGTAGTCAAACAGATGGTCCAGGAGCATCTTGTCTAGATGCAGGTTaGCTTGGACACAAGCTTCATGAAGTTCTGCTCTGTCAATCACCC | + |
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Preference number: 1 (lower is better) Translates to: SSQTDGPGASCLDAG*LGHKLHEVLLCQSP Trigger: GGGTGATTGACAGAGCAGAACTTCATGAAGCTTGTGTCCAAGCCAACCTGCATCTAGACAAGATGCTCCTGGACCATCTGTTTGACTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR CCA 90 bp | GTCTCTGGATTGTCCGGAGAGTCTCTTCTGAACTTCCTGGTTCTTTaGGGACAATGTCTTCAGGATTTATCAGGAGACTTGGTTCAGCTT | + |
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Preference number: 1 (lower is better) Translates to: VSGLSGESLLNFLVL*GQCLQDLSGDLVQL Trigger: AAGCTGAACCAAGTCTCCTGATAAATCCTGAAGACATTGTCCCCAAAGAACCAGGAAGTTCAGAAGAGACTCTCCGGACAATCCAGAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR TCA 90 bp | AGAAACTTTGTCACCTGGTCTCTGGATTGTCCGGAGAGTCTCTTCTaGACTTCCTGGTTCTTTGGGGACAATGTCTTCAGGATTTATCAG | + |
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Preference number: 1 (lower is better) Translates to: RNFVTWSLDCPESLF*TSWFFGDNVFRIYQ Trigger: CTGATAAATCCTGAAGACATTGTCCCCAAAGAACCAGGAAGTTCAGAAGAGACTCTCCGGACAATCCAGAGACCAGGTGACAAAGTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR GCA 90 bp | ATTAGTAGATATCAAAGTTGTAGTACTTTTCAGGCATTGTGGGAGTaGATTCCTGTAGCTCCAGCACTTGGGAGGCTAAAGCAGGAATGT | + |
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Preference number: 1 (lower is better) Translates to: ISRYQSCSTFQALWE*IPVAPALGRLKQEC Trigger: ACATTCCTGCTTTAGCCTCCCAAGTGCTGGAGCTACAGGAATGCACTCCCACAATGCCTGAAAAGTACTACAACTTTGATATCTACTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR CCA 90 bp | ATCATTCATCAAGAATCCTATATTCGGGCTAGAGAGATGGCTCAGTaGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTTAATT | + |
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Preference number: 1 (lower is better) Translates to: IIHQESYIRAREMAQ*LRALTALPEVLSLI Trigger: AATTAAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGCCATCTCTCTAGCCCGAATATAGGATTCTTGATGAATGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR CCA 90 bp | AGTTCAAAACCAGCCTCAGCCATGCAGCTGATTCAGAGGCTGGCCTaGACTACACAAGATGATGATAAAAATGATGATGATGATAAATGT | + |
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Preference number: 1 (lower is better) Translates to: SSKPASAMQLIQRLA*TTQDDDKNDDDDKC Trigger: ACATTTATCATCATCATCATTTTTATCATCATCTTGTGTAGTCCAGGCCAGCCTCTGAATCAGCTGCATGGCTGAGGCTGGTTTTGAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR CCA 90 bp | TATGAAATTAGTAGATATCAAAGTTGTAGTACTTTTCAGGCATTGTaGGAGTGCATTCCTGTAGCTCCAGCACTTGGGAGGCTAAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: YEISRYQSCSTFQAL*ECIPVAPALGRLKQ Trigger: CTGCTTTAGCCTCCCAAGTGCTGGAGCTACAGGAATGCACTCCCACAATGCCTGAAAAGTACTACAACTTTGATATCTACTAATTTCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR GCA 90 bp | ATATGGCAGTCACTGGTCCTCCACAAAAGTACATGTGTTCACATATaGATATGTGCCCATACATATGAAATTAGTAGATATCAAAGTTGT | + |
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Preference number: 1 (lower is better) Translates to: IWQSLVLHKSTCVHI*ICAHTYEISRYQSC Trigger: ACAACTTTGATATCTACTAATTTCATATGTATGGGCACATATGCATATGTGAACACATGTACTTTTGTGGAGGACCAGTGACTGCCATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGACATCGTCATCTGTGCTTGTCATCACTTGGGAGGCAGAGGCAGAAAGATGACACCGAATATGGGGTaGCACATGGAGGGGACAGCT | + |
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Preference number: 2 (lower is better) Translates to: VDIVICACHHLGGRGRKMTPNMG*HMEGTA Trigger: AGCTGTCCCCTCCATGTGTCACCCCATATTCGGTGT...CATCTTTCTGCCTCTGCCTCCCAAGTGATGACAAGCACAGATGACGATGTCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR-3UTR GCA 90 bp | CCGGGGAGCAGAGATGTCAGATCGAATGGTTGGAACACCGAATATGGGGTGACATGCCTGAAAGCCACCTaGAAAGTGTCAAAGTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: PGSRDVRSNGWNTEYGVTCLKAT*KVSKFW Trigger: CCAGAACTTTGACACTTTGCAGGTGGCTTTCAGGCA...TGTCACCCCATATTCGGTGTTCCAACCATTCGATCTGACATCTCTGCTCCCCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR CAA 90 bp | GGCTTACCTCAAAAAGCTCTTGCCTATCATGCACAAACCCTGGATTaGATCTCCAGCACCACAAGTGCCAGGCACATACCTACACTCAGG | + |
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Preference number: 2 (lower is better) Translates to: GLPQKALAYHAQTLD*ISSTTSARHIPTLR Trigger: CCTGAGTGTAGGTATGTGCCTGGCACTTGTGGTGCTGGAGATCAAATCCAGGGTTTGTGCATGATAGGCAAGAGCTTTTTGAGGTAAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGACATCGTCATCTGTGCTTGTCATCACTTGGGAGGCAGAGGCAGAAAGATGCAACTTCCAAATGTGTaGCCTGGGGGAACATTCATA | + |
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Preference number: 2 (lower is better) Translates to: VDIVICACHHLGGRGRKMQLPNV*PGGTFI Trigger: TATGAATGTTCCCCCAGGTCACACATTTGGAAGTTG...CATCTTTCTGCCTCTGCCTCCCAAGTGATGACAAGCACAGATGACGATGTCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGACATCGTCATCTGTGCTTGTCATCACTTGGGAGGCAGAGGCAGAAAGATGTGGACACAAGCTTCATaGAGTTCTGCTCTGTCAATC | + |
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Preference number: 2 (lower is better) Translates to: VDIVICACHHLGGRGRKMWTQAS*SSALSI Trigger: GATTGACAGAGCAGAACTTCATGAAGCTTGTGTCCA...CATCTTTCTGCCTCTGCCTCCCAAGTGATGACAAGCACAGATGACGATGTCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR-3UTR GCA 90 bp | ATGTCACTGACTCGACGAATCCGGGGAGCAGAGATGTCAGATCGAATGGTTGGAACGACCCTCTTCTCATaGTCTTTGAGAGGTATTCTG | + |
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Preference number: 2 (lower is better) Translates to: MSLTRRIRGAEMSDRMVGTTLFS*SLRGIL Trigger: CAGAATACCTCTCAAAGAGCATGAGAAGAGGGTCGT...TCCAACCATTCGATCTGACATCTCTGCTCCCCGGATTCGTCGAGTCAGTGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR-3UTR CCA 90 bp | ATGTCACTGACTCGACGAATCCGGGGAGCAGAGATGTCAGATCGAATGGTTGGATGGGTGGTAGGAGCATaGAAGAAGACTTCTGCAAAA | + |
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Preference number: 2 (lower is better) Translates to: MSLTRRIRGAEMSDRMVGWVVGA*KKTSAK Trigger: TTTTGCAGAAGTCTTCTTCCATGCTCCTACCACCCA...TCCAACCATTCGATCTGACATCTCTGCTCCCCGGATTCGTCGAGTCAGTGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR-3UTR CCA 90 bp | CCGGGGAGCAGAGATGTCAGATCGAATGGTTGGAACACCGAATATGGGGTGACAATTTATCAGGAGACTTaGTTCAGCTTCTCCCATGCT | + |
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Preference number: 2 (lower is better) Translates to: PGSRDVRSNGWNTEYGVTIYQET*FSFSHA Trigger: AGCATGGGAGAAGCTGAACCAAGTCTCCTGATAAAT...TGTCACCCCATATTCGGTGTTCCAACCATTCGATCTGACATCTCTGCTCCCCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR CAA 90 bp | GGTCTCTGGATTGTCCGGAGAGTCTCTTCTGAACTTCCTGGTTCTTaGGGGACAATGTCTTCAGGATTTATCAGGAGACTTGGTTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: GLWIVRRVSSELPGS*GTMSSGFIRRLGSA Trigger: AGCTGAACCAAGTCTCCTGATAAATCCTGAAGACATTGTCCCCAAAGAACCAGGAAGTTCAGAAGAGACTCTCCGGACAATCCAGAGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR-3UTR CCA 90 bp | GAACTTCCTGGTTCTTTGGGGACAATGTCTTCAGGATTTATCAGGAGACTTGGTTCTTTGCTTCTCCTGTaGGTGGTAGGAGCATGGAAG | + |
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Preference number: 2 (lower is better) Translates to: ELPGSLGTMSSGFIRRLGSLLLL*VVGAWK Trigger: CTTCCATGCTCCTACCACCCACAGGAGAAGCAAAGA...ACCAAGTCTCCTGATAAATCCTGAAGACATTGTCCCCAAAGAACCAGGAAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR-3UTR CCA 90 bp | CCGGGGAGCAGAGATGTCAGATCGAATGGTTGGAACACCGAATATGGGGTGACAAGTCATCAACTCTTTTaGATACAATTTTCGCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: PGSRDVRSNGWNTEYGVTSHQLF*IQFSLL Trigger: GAGGAGCGAAAATTGTATCCAAAAGAGTTGATGACT...TGTCACCCCATATTCGGTGTTCCAACCATTCGATCTGACATCTCTGCTCCCCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTCACTGACTCGACGAATCCGGGGAGCAGAGATGTCAGATCGAATGGTTGGAGTGTCAAAGTTCTGGTaGTTAAATTTCTTCAAGTGG | + |
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Preference number: 2 (lower is better) Translates to: MSLTRRIRGAEMSDRMVGVSKFW*LNFFKW Trigger: CCACTTGAAGAAATTTAATCACCAGAACTTTGACAC...TCCAACCATTCGATCTGACATCTCTGCTCCCCGGATTCGTCGAGTCAGTGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGGCCTACATAGTGAGACCCTGTTTGAAGGGGGAAAGAATTATATAATATACATATGGGGTGACACATaGAGGGGACAGCTCCAACCA | + |
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Preference number: 2 (lower is better) Translates to: LGLHSETLFEGGKNYIIYIWGDT*RGQLQP Trigger: TGGTTGGAGCTGTCCCCTCCATGTGTCACCCCATAT...GTATATTATATAATTCTTTCCCCCTTCAAACAGGGTCTCACTATGTAGGCCAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR-3UTR TCA 90 bp | ATGAAATTAGTAGATATCAAAGTTGTAGTACTTTTCAGGCATTGTGGGAGTGCACCGGAGAGTCTCTTCTaGACTTCCTGGTTCTTTGGG | + |
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Preference number: 2 (lower is better) Translates to: MKLVDIKVVVLFRHCGSAPESLF*TSWFFG Trigger: CCCAAAGAACCAGGAAGTTCAGAAGAGACTCTCCGG...TGCACTCCCACAATGCCTGAAAAGTACTACAACTTTGATATCTACTAATTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGGCCTACATAGTGAGACCCTGTTTGAAGGGGGAAAGAATTATATAATATACTCAAATACACCTTTCTaGGAGAAGATGGAGGGGTGC | + |
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Preference number: 2 (lower is better) Translates to: LGLHSETLFEGGKNYIIYSNTPF*EKMEGC Trigger: GCACCCCTCCATCTTCTCCCAGAAAGGTGTATTTGA...GTATATTATATAATTCTTTCCCCCTTCAAACAGGGTCTCACTATGTAGGCCAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR-3UTR TCA 90 bp | AGTGAGTTTGAGATAAGCCTGTACTGTAGAGTGAGACCTTTTCTCATTCTTATTCGCCCATCATTAAAGTaGGGTGTTGGGATTCCATAC | + |
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Preference number: 2 (lower is better) Translates to: SEFEISLYCRVRPFLILIRPSLK*GVGIPY Trigger: GTATGGAATCCCAACACCTCACTTTAATGATGGGCG...AATAAGAATGAGAAAAGGTCTCACTCTACAGTACAGGCTTATCTCAAACTCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGGCCTACATAGTGAGACCCTGTTTGAAGGGGGAAAGAATTATATAATATACATGTCTGTTCATGTCTaGAATCCCAATGCTTTGGGA | + |
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Preference number: 2 (lower is better) Translates to: LGLHSETLFEGGKNYIIYMSVHV*NPNALG Trigger: TCCCAAAGCATTGGGATTGCAGACATGAACAGACAT...GTATATTATATAATTCTTTCCCCCTTCAAACAGGGTCTCACTATGTAGGCCAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR-3UTR CCA 90 bp | ATGAAATTAGTAGATATCAAAGTTGTAGTACTTTTCAGGCATTGTGGGAGTGCACCATATTCCTCAGGATaGAGGCAACTTCCAAATGTG | + |
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Preference number: 2 (lower is better) Translates to: MKLVDIKVVVLFRHCGSAPYSSG*RQLPNV Trigger: CACATTTGGAAGTTGCCTCCATCCTGAGGAATATGG...TGCACTCCCACAATGCCTGAAAAGTACTACAACTTTGATATCTACTAATTTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR-3UTR CCA 90 bp | ATGAAATTAGTAGATATCAAAGTTGTAGTACTTTTCAGGCATTGTGGGAGTGCATTAAATTTCTTCAAGTaGTGGCGAGCAGCTGCAACC | + |
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Preference number: 2 (lower is better) Translates to: MKLVDIKVVVLFRHCGSALNFFK*WRAAAT Trigger: GGTTGCAGCTGCTCGCCACCACTTGAAGAAATTTAA...TGCACTCCCACAATGCCTGAAAAGTACTACAACTTTGATATCTACTAATTTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR-3UTR CCA 90 bp | ATGAAATTAGTAGATATCAAAGTTGTAGTACTTTTCAGGCATTGTGGGAGTGCATACAAGTTAAACCTATaGAAGCTTGCCGGGTTATAT | + |
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Preference number: 2 (lower is better) Translates to: MKLVDIKVVVLFRHCGSAYKLNL*KLAGLY Trigger: ATATAACCCGGCAAGCTTCCATAGGTTTAACTTGTA...TGCACTCCCACAATGCCTGAAAAGTACTACAACTTTGATATCTACTAATTTCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGAGTTTGAGATAAGCCTGTACTGTAGAGTGAGACCTTTTCTCATTCTTATTTCCATTTGTAGTTCATaGAGCCAATGTAAAGCTTTA | + |
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Preference number: 2 (lower is better) Translates to: SEFEISLYCRVRPFLILISICSS*SQCKAL Trigger: TAAAGCTTTACATTGGCTCCATGAACTACAAATGGA...AATAAGAATGAGAAAAGGTCTCACTCTACAGTACAGGCTTATCTCAAACTCACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR CCA 72 bp | CGAGACAGAAAAGCCACCAAGCCCTGTAGGCCAGTGTaGGCTGGGCTGCACAGTGAGTACCAGGCCAGAGCG | + |
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Preference number: 3 (lower is better) Translates to: RDRKATKPCRPV*AGLHSEYQARA Trigger: CGCTCTGGCCTGGTACTCACTGTGCAGCCCAGCCCACACTGGCCTACAGGGCTTGGTGGCTTTTCTGTCTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR CCA 72 bp | AAGTGGTGGCGAGCAGCTGCAACCACGGCTCTCTGGTaGTCCTTCCCACGAAGATATTCATCTGGGCTTCTA | + |
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Preference number: 3 (lower is better) Translates to: KWWRAAATTALW*SFPRRYSSGLL Trigger: TAGAAGCCCAGATGAATATCTTCGTGGGAAGGACCACCAGAGAGCCGTGGTTGCAGCTGCTCGCCACCACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR CCA 72 bp | TTCAAGTGGTGGCGAGCAGCTGCAACCACGGCTCTCTaGTGGTCCTTCCCACGAAGATATTCATCTGGGCTT | + |
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Preference number: 3 (lower is better) Translates to: FKWWRAAATTAL*WSFPRRYSSGL Trigger: AAGCCCAGATGAATATCTTCGTGGGAAGGACCACCAGAGAGCCGTGGTTGCAGCTGCTCGCCACCACTTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR GCA 72 bp | CTGGTGATTAAATTTCTTCAAGTGGTGGCGAGCAGCTaGAACCACGGCTCTCTGGTGGTCCTTCCCACGAAG | + |
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Preference number: 3 (lower is better) Translates to: LVIKFLQVVASS*NHGSLVVLPTK Trigger: CTTCGTGGGAAGGACCACCAGAGAGCCGTGGTTGCAGCTGCTCGCCACCACTTGAAGAAATTTAATCACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR CCA 72 bp | CTCGACGAATCCGGGGAGCAGAGATGTCAGATCGAATaGTTGGAACACCGAATATGGGGTGACACATGGAGG | + |
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Preference number: 3 (lower is better) Translates to: LDESGEQRCQIE*LEHRIWGDTWR Trigger: CCTCCATGTGTCACCCCATATTCGGTGTTCCAACCATTCGATCTGACATCTCTGCTCCCCGGATTCGTCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR TCA 72 bp | ATGTCAGATCGAATGGTTGGAACACCGAATATGGGGTaGCACATGGAGGGGACAGCTCCAACCACAGCGTTG | + |
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Preference number: 3 (lower is better) Translates to: MSDRMVGTPNMG*HMEGTAPTTAL Trigger: CAACGCTGTGGTTGGAGCTGTCCCCTCCATGTGTCACCCCATATTCGGTGTTCCAACCATTCGATCTGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR TCA 72 bp | GGATCAGAAGTTCAAAACCAGCCTCAGCCATGCAGCTaGTTCAGAGGCTGGCCTGGACTACACAAGATGATG | + |
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Preference number: 3 (lower is better) Translates to: GSEVQNQPQPCS*FRGWPGLHKMM Trigger: CATCATCTTGTGTAGTCCAGGCCAGCCTCTGAATCAGCTGCATGGCTGAGGCTGGTTTTGAACTTCTGATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR TCA 72 bp | GGTGACACATGGAGGGGACAGCTCCAACCACAGCGTTaGTCTCAGAAGACGTTGTCTTATACTGGTGAGAAA | + |
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Preference number: 3 (lower is better) Translates to: GDTWRGQLQPQR*SQKTLSYTGEK Trigger: TTTCTCACCAGTATAAGACAACGTCTTCTGAGATCAACGCTGTGGTTGGAGCTGTCCCCTCCATGTGTCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR TCA 72 bp | TCCCACGAAGATATTCATCTGGGCTTCTATAATGGATaGGATCGCCAGCTCCATATTCCTCAGGATGGAGGC | + |
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Preference number: 3 (lower is better) Translates to: SHEDIHLGFYNG*DRQLHIPQDGG Trigger: GCCTCCATCCTGAGGAATATGGAGCTGGCGATCTCATCCATTATAGAAGCCCAGATGAATATCTTCGTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR CCA 72 bp | ACAGATGGTCCAGGAGCATCTTGTCTAGATGCAGGTTaGCTTGGACACAAGCTTCATGAAGTTCTGCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: TDGPGASCLDAG*LGHKLHEVLLC Trigger: ACAGAGCAGAACTTCATGAAGCTTGTGTCCAAGCCAACCTGCATCTAGACAAGATGCTCCTGGACCATCTGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR CCA 72 bp | CAAGTATGTCTGTTCATGTCTGCAATCCCAATGCTTTaGGAAGCCGAGACAGAAAAGCCACCAAGCCCTGTA | + |
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Preference number: 3 (lower is better) Translates to: QVCLFMSAIPML*EAETEKPPSPV Trigger: TACAGGGCTTGGTGGCTTTTCTGTCTCGGCTTCCCAAAGCATTGGGATTGCAGACATGAACAGACATACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR TCA 72 bp | TGCCTGAAAGCCACCTGCAAAGTGTCAAAGTTCTGGTaGTTAAATTTCTTCAAGTGGTGGCGAGCAGCTGCA | + |
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Preference number: 3 (lower is better) Translates to: CLKATCKVSKFW*LNFFKWWRAAA Trigger: TGCAGCTGCTCGCCACCACTTGAAGAAATTTAATCACCAGAACTTTGACACTTTGCAGGTGGCTTTCAGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR TCA 72 bp | AAAAAGCTCTTGCCTATCATGCACAAACCCTGGATTTaGTCTCCAGCACCACAAGTGCCAGGCACATACCTA | + |
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Preference number: 3 (lower is better) Translates to: KKLLPIMHKPWI*SPAPQVPGTYL Trigger: TAGGTATGTGCCTGGCACTTGTGGTGCTGGAGATCAAATCCAGGGTTTGTGCATGATAGGCAAGAGCTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
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| 3UTR CCA 72 bp | CCAGCCTCAGCCATGCAGCTGATTCAGAGGCTGGCCTaGACTACACAAGATGATGATAAAAATGATGATGAT | + |
|
Preference number: 3 (lower is better) Translates to: PASAMQLIQRLA*TTQDDDKNDDD Trigger: ATCATCATCATTTTTATCATCATCTTGTGTAGTCCAGGCCAGCCTCTGAATCAGCTGCATGGCTGAGGCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
||
| 3UTR GCA 72 bp | TATCAAAGTTGTAGTACTTTTCAGGCATTGTGGGAGTaGATTCCTGTAGCTCCAGCACTTGGGAGGCTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: YQSCSTFQALWE*IPVAPALGRLK Trigger: CTTTAGCCTCCCAAGTGCTGGAGCTACAGGAATGCACTCCCACAATGCCTGAAAAGTACTACAACTTTGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
||
| 3UTR CCA 72 bp | AGTAGATATCAAAGTTGTAGTACTTTTCAGGCATTGTaGGAGTGCATTCCTGTAGCTCCAGCACTTGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SRYQSCSTFQAL*ECIPVAPALGR Trigger: CCTCCCAAGTGCTGGAGCTACAGGAATGCACTCCCACAATGCCTGAAAAGTACTACAACTTTGATATCTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
||
| 3UTR CCA 72 bp | TTGCCGGGTTATATTTTCGATTCTTTGCTTCTCCTGTaGGTGGTAGGAGCATGGAAGAAGACTTCTGCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LPGYIFDSLLLL*VVGAWKKTSAK Trigger: TTTTGCAGAAGTCTTCTTCCATGCTCCTACCACCCACAGGAGAAGCAAAGAATCGAAAATATAACCCGGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
||
| 3UTR CCA 72 bp | GATACAATTTTCGCTCCTCTTTCCATTTGTAGTTCATaGAGCCAATGTAAAGCTTTAGCCATGGTGCGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: DTIFAPLSICSS*SQCKALAMVRP Trigger: TGGGCGCACCATGGCTAAAGCTTTACATTGGCTCCATGAACTACAAATGGAAAGAGGAGCGAAAATTGTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGTCTTCAGGATTTATCAGGAGACTTGGTTCAGCTTCTCCCATGCTAGTATCACTCTTCTCATGCTCTTaGAGAGGTATTCTGTCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: MSSGFIRRLGSASPMLVSLFSCS*RGILSF Trigger: GAAAGACAGAATACCTCTCAAAGAGCATGAGAAGAG...TGATACTAGCATGGGAGAAGCTGAACCAAGTCTCCTGATAAATCCTGAAGACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGAAATTAGTAGATATCAAAGTTGTAGTACTTTTCAGGCATTGTGGGAGTGCAGAACTTCCTGGTTCTTaGGGGACAATGTCTTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: MKLVDIKVVVLFRHCGSAELPGS*GTMSSG Trigger: TCCTGAAGACATTGTCCCCAAAGAACCAGGAAGTTC...TGCACTCCCACAATGCCTGAAAAGTACTACAACTTTGATATCTACTAATTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
||
| 3UTR GCA 72 bp | TGTTGGGATTCCATACAAGTTAAACCTATGGAAGCTTaGCGGGTTATATTTTCGATTCTTTGCTTCTCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: CWDSIQVKPMEA*RVIFSILCFSC Trigger: ACAGGAGAAGCAAAGAATCGAAAATATAACCCGGCAAGCTTCCATAGGTTTAACTTGTATGGAATCCCAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTGAGTTTGAGATAAGCCTGTACTGTAGAGTGAGACCTTTTCTCATTCTTATTTATATTTTCGATTCTTaGCTTCTCCTGTGGGTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: SEFEISLYCRVRPFLILIYIFDS*LLLWVV Trigger: TACCACCCACAGGAGAAGCAAAGAATCGAAAATATA...AATAAGAATGAGAAAAGGTCTCACTCTACAGTACAGGCTTATCTCAAACTCACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTGAGTTTGAGATAAGCCTGTACTGTAGAGTGAGACCTTTTCTCATTCTTATTTCCTTTGACCTTGTCTaGAAGAAGTCTCTCTCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: SEFEISLYCRVRPFLILISFDLV*KKSLSN Trigger: ATTTGAGAGAGACTTCTTCAAGACAAGGTCAAAGGA...AATAAGAATGAGAAAAGGTCTCACTCTACAGTACAGGCTTATCTCAAACTCACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGAAATTAGTAGATATCAAAGTTGTAGTACTTTTCAGGCATTGTGGGAGTGCAATAGTGAGACCCTGTTaGAAGGGGGAAAGAATTATA | + |
|
Preference number: 3 (lower is better) Translates to: MKLVDIKVVVLFRHCGSAIVRPC*KGERII Trigger: TATAATTCTTTCCCCCTTCAAACAGGGTCTCACTAT...TGCACTCCCACAATGCCTGAAAAGTACTACAACTTTGATATCTACTAATTTCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
||
| CDS-3UTR TCA 90 bp | CCGGGGAGCAGAGATGTCAGATCGAATGGTTGGAACACCGAATATGGGGTGACACTCCGTGGGAGATTTTaGCCCCCTAAGTACCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PGSRDVRSNGWNTEYGVTLRGRF*PPKYPV Trigger: GACAGGGTACTTAGGGGGTCAAAATCTCCCACGGAG...TGTCACCCCATATTCGGTGTTCCAACCATTCGATCTGACATCTCTGCTCCCCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
||
| CDS-3UTR TCA 90 bp | CCACGGCTCTCTGGTGGTCCTTCCCACGAAGATATTCATCTGGGCTTCTATAATCTGAGTATATGGGCCTaGTGTTCCCTGGAGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PRLSGGPSHEDIHLGFYNLSIWA*CSLEAP Trigger: TGGAGCCTCCAGGGAACATCAGGCCCATATACTCAG...ATTATAGAAGCCCAGATGAATATCTTCGTGGGAAGGACCACCAGAGAGCCGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
||
| CDS-3UTR GCA 90 bp | GTGGACATCGTCATCTGTGCTTGTCATCACTTGGGAGGCAGAGGCAGAAAGATGGGAGAAGCTGAAGTTTaGAAAGGTTTGGGGGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: VDIVICACHHLGGRGRKMGEAEV*KGLGDP Trigger: GGGGTCCCCCAAACCTTTGCAAACTTCAGCTTCTCC...CATCTTTCTGCCTCTGCCTCCCAAGTGATGACAAGCACAGATGACGATGTCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
||
| CDS-3UTR CCA 90 bp | GTGGACATCGTCATCTGTGCTTGTCATCACTTGGGAGGCAGAGGCAGAAAGATGAAGTTTGCAAAGGTTTaGGGGACCCCACTCTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: VDIVICACHHLGGRGRKMKFAKV*GTPLSQ Trigger: TTGTGAGAGTGGGGTCCCCCAAACCTTTGCAAACTT...CATCTTTCTGCCTCTGCCTCCCAAGTGATGACAAGCACAGATGACGATGTCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
||
| 3UTR CAA 72 bp | CAGAGGCAGAAAGATGCTCTTGAGTTGAAGGCCTACTaGGCCTACATAGTGAGACCCTGTTTGAAGGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QRQKDALELKAY*AYIVRPCLKGE Trigger: TTCCCCCTTCAAACAGGGTCTCACTATGTAGGCCAAGTAGGCCTTCAACTCAAGAGCATCTTTCTGCCTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
||
| CDS-3UTR TCA 90 bp | CCGGGGAGCAGAGATGTCAGATCGAATGGTTGGAACACCGAATATGGGGTGACAATTCTTGGCTTCATCTaGTTCCTGAGTTTGTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PGSRDVRSNGWNTEYGVTILGFI*FLSLWQ Trigger: TTGCCACAAACTCAGGAATCAGATGAAGCCAAGAAT...TGTCACCCCATATTCGGTGTTCCAACCATTCGATCTGACATCTCTGCTCCCCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
||
| CDS-3UTR CCA 90 bp | CTGGTGATTAAATTTCTTCAAGTGGTGGCGAGCAGCTGCAACCACGGCTCTCTGGAGGCTCTGTATTCTTaGCTTCATCTGATTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LVIKFLQVVASSCNHGSLEALYS*LHLIPE Trigger: CTCAGGAATCAGATGAAGCCAAGAATACAGAGCCTC...CAGAGAGCCGTGGTTGCAGCTGCTCGCCACCACTTGAAGAAATTTAATCACCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
||
| CDS-3UTR CCA 90 bp | AGTGAGTTTGAGATAAGCCTGTACTGTAGAGTGAGACCTTTTCTCATTCTTATTGGGCCTGATGTTCCCTaGAGGCTCCACTCCGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SEFEISLYCRVRPFLILIGPDVP*RLHSGF Trigger: GAACCCGGAGTGGAGCCTCCAGGGAACATCAGGCCC...AATAAGAATGAGAAAAGGTCTCACTCTACAGTACAGGCTTATCTCAAACTCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
||
| CDS-3UTR CCA 90 bp | CAAAGTGTCAAAGTTCTGGTGATTAAATTTCTTCAAGTGGTGGCGAGCAGCTGCGAACAGACAGTTACTTaGCCAGCAAGGCACCCGATC | + |
|
Preference number: 4 (lower is better) Translates to: QSVKVLVIKFLQVVASSCEQTVT*PARHPI Trigger: GATCGGGTGCCTTGCTGGCCAAGTAACTGTCTGTTC...GCAGCTGCTCGCCACCACTTGAAGAAATTTAATCACCAGAACTTTGACACTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGTGTCAAAGTTCTGGTGATTAAATTTCTTCAAGTGGTGGCGAGCAGCTGCTTGCATGTACTGTGCTaGAAGGAGGGTGTAGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QSVKVLVIKFLQVVASSCLHVLC*KEGVVS Trigger: GGACACTACACCCTCCTTTCAGCACAGTACATGCAA...GCAGCTGCTCGCCACCACTTGAAGAAATTTAATCACCAGAACTTTGACACTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGTGTCAAAGTTCTGGTGATTAAATTTCTTCAAGTGGTGGCGAGCAGCTGCGCTTCATCTGATTCCTaGGTTTGTGGCAACCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: QSVKVLVIKFLQVVASSCASSDS*VCGNPM Trigger: CATCGGGTTGCCACAAACTCAGGAATCAGATGAAGC...GCAGCTGCTCGCCACCACTTGAAGAAATTTAATCACCAGAACTTTGACACTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
||
| CDS-3UTR CCA 90 bp | GAACTTCCTGGTTCTTTGGGGACAATGTCTTCAGGATTTATCAGGAGACTTGGTATCGTCCTTTTGCTCTaGGGTGAGTCCAAGTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: ELPGSLGTMSSGFIRRLGIVLLL*GESKFR Trigger: TCGGAACTTGGACTCACCCCAGAGCAAAAGGACGAT...ACCAAGTCTCCTGATAAATCCTGAAGACATTGTCCCCAAAGAACCAGGAAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
||
| 3UTR CAA 72 bp | ACCTATGGAAGCTTGCCGGGTTATATTTTCGATTCTTaGCTTCTCCTGTGGGTGGTAGGAGCATGGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TYGSLPGYIFDS*LLLWVVGAWKK Trigger: CTTCTTCCATGCTCCTACCACCCACAGGAGAAGCAAAGAATCGAAAATATAACCCGGCAAGCTTCCATAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
||
| CDS-3UTR TCA 90 bp | AGTGAGTTTGAGATAAGCCTGTACTGTAGAGTGAGACCTTTTCTCATTCTTATTCACACCCAGAGGTTTTaGTCCCTGGAAGGCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SEFEISLYCRVRPFLILIHTQRF*SLEGRA Trigger: GGCTCTGCCTTCCAGGGATCAAAACCTCTGGGTGTG...AATAAGAATGAGAAAAGGTCTCACTCTACAGTACAGGCTTATCTCAAACTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGTGTCAAAGTTCTGGTGATTAAATTTCTTCAAGTGGTGGCGAGCAGCTGCAAGGCAGAGCCTTTGTaGAGTCCTAAATTACCCATC | + |
|
Preference number: 4 (lower is better) Translates to: QSVKVLVIKFLQVVASSCKAEPL*SPKLPI Trigger: GATGGGTAATTTAGGACTTCACAAAGGCTCTGCCTT...GCAGCTGCTCGCCACCACTTGAAGAAATTTAATCACCAGAACTTTGACACTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
||
| 3UTR CAA 72 bp | ATTAGTAGATATCAAAGTTGTAGTACTTTTCAGGCATaGTGGGAGTGCATTCCTGTAGCTCCAGCACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ISRYQSCSTFQA*WECIPVAPALG Trigger: CCCAAGTGCTGGAGCTACAGGAATGCACTCCCACAATGCCTGAAAAGTACTACAACTTTGATATCTACTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
||
| CDS-3UTR CCA 90 bp | GTGCCTGAAAGCCACCTGCAAAGTGTCAAAGTTCTGGTGATTAAATTTCTTCAACGGTTGTTGGGCAAATaGACATTCAGAAGGTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VPESHLQSVKVLVIKFLQRLLGK*TFRRFS Trigger: AGAGAACCTTCTGAATGTCCATTTGCCCAACAACCG...TTGAAGAAATTTAATCACCAGAACTTTGACACTTTGCAGGTGGCTTTCAGGCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
||
| CDS-3UTR GCA 90 bp | GTGCCTGAAAGCCACCTGCAAAGTGTCAAAGTTCTGGTGATTAAATTTCTTCAAAAACCTACAACAGGTTaGTTTTCCACTACAGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: VPESHLQSVKVLVIKFLQKPTTG*FSTTAS Trigger: GGATGCTGTAGTGGAAAAGCAACCTGTTGTAGGTTT...TTGAAGAAATTTAATCACCAGAACTTTGACACTTTGCAGGTGGCTTTCAGGCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
||
| 3UTR CAA 72 bp | TTTTTACCTTTAACAACGACCCTCTTCTCATGCTCTTaGAGAGGTATTCTGTCTTTCCAGTTAAGGAAATTG | + |
|
Preference number: 4 (lower is better) Translates to: FLPLTTTLFSCS*RGILSFQLRKL Trigger: CAATTTCCTTAACTGGAAAGACAGAATACCTCTCAAAGAGCATGAGAAGAGGGTCGTTGTTAAAGGTAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
||
| CDS TCA 90 bp | GCCAGCAAGGCACCCGATCAAAGAACTTCCCTGAGTATATGGGCCTaGTGTTCCCTGGAGGCTCCACTCCGGGTTCGGTGCTGCCGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ASKAPDQRTSLSIWA*CSLEAPLRVRCCRA Trigger: AGCCCGGCAGCACCGAACCCGGAGTGGAGCCTCCAGGGAACATCAGGCCCATATACTCAGGGAAGTTCTTTGATCGGGTGCCTTGCTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024725.5 ENSMUST00000233544.2 |
||
| CDS TCA 90 bp | TTTTCCTGCACTTGGCCAGCAAGGCACCCGATCAAAGAACTTCCCTaGGTATATGGGCCTGATGTTCCCTGGAGGCTCCACTCCGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: FSCTWPARHPIKELP*VYGPDVPWRLHSGF Trigger: GAACCCGGAGTGGAGCCTCCAGGGAACATCAGGCCCATATACTCAGGGAAGTTCTTTGATCGGGTGCCTTGCTGGCCAAGTGCAGGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024725.5 |
||
| CDS TCA 90 bp | CAGACAGTTACTTGGCCAGCAAGGCACCCGATCAAAGAACTTCCCTaGGTATATGGGCCTGATGTTCCCTGGAGGCTCCACTCCGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: QTVTWPARHPIKELP*VYGPDVPWRLHSGF Trigger: GAACCCGGAGTGGAGCCTCCAGGGAACATCAGGCCCATATACTCAGGGAAGTTCTTTGATCGGGTGCCTTGCTGGCCAAGTAACTGTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
||
| CDS-3UTR CAA 90 bp | GTGGACATCGTCATCTGTGCTTGTCATCACTTGGGAGGCAGAGGCAGAAAGATGACACACCCAGAGGTTTaGATCCCTGGAAGGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VDIVICACHHLGGRGRKMTHPEV*IPGRQS Trigger: GCTCTGCCTTCCAGGGATCAAAACCTCTGGGTGTGT...CATCTTTCTGCCTCTGCCTCCCAAGTGATGACAAGCACAGATGACGATGTCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
||
| CDS CCA 90 bp | CCTGGGAAGCTTCTCAGTCAAACAGGTTGCAACTCTGTATCCAACTaGCTTAACTTTTCCTGCACTTGGCCAGCAAGGCACCCGATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PGKLLSQTGCNSVSN*LNFSCTWPARHPIK Trigger: TTTGATCGGGTGCCTTGCTGGCCAAGTGCAGGAAAAGTTAAGCCAGTTGGATACAGAGTTGCAACCTGTTTGACTGAGAAGCTTCCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024725.5 |
||
| CDS TCA 90 bp | ACTAAACCTATTAGAGGCTCTGTATTCTTGGCTTCATCTGATTCCTaGGTTTGTGGCAACCCGATGTCTACCTCCTTAGGGGGCATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TKPIRGSVFLASSDS*VCGNPMSTSLGGIS Trigger: AGAGATGCCCCCTAAGGAGGTAGACATCGGGTTGCCACAAACTCAGGAATCAGATGAAGCCAAGAATACAGAGCCTCTAATAGGTTTAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024725.5 ENSMUST00000233544.2 |
||
| CDS CCA 90 bp | GGTGTCCCAGAAATAGTATGTCTTTCTAATCCTACTCCAAGAGCATaGCAAGGTGGCGATTTTGCTTCTGATGATCCCATCCTCTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GVPEIVCLSNPTPRA*QGGDFASDDPILSL Trigger: GAGAGAGAGGATGGGATCATCAGAAGCAAAATCGCCACCTTGCCATGCTCTTGGAGTAGGATTAGAAAGACATACTATTTCTGGGACACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024725.5 ENSMUST00000233544.2 |
||
| CDS CCA 90 bp | ATGTCCTTCCTGTCCTTCTTTAAGCACATCTTCGAAGGATTTCGATaGATTCACAGTGTCACGAACAGACAGTTCTCTGATAGTCGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: MSFLSFFKHIFEGFR*IHSVTNRQFSDSRC Trigger: ACACCGACTATCAGAGAACTGTCTGTTCGTGACACTGTGAATCCATCGAAATCCTTCGAAGATGTGCTTAAAGAAGGACAGGAAGGACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024725.5 |
||
| CDS CCA 90 bp | ATTCAGAAGGTTCTCTTACTAAACCTATTAGAGGCTCTGTATTCTTaGCTTCATCTGATTCCTGAGTTTGTGGCAACCCGATGTCTACCT | + |
|
Preference number: 5 (lower is better) Translates to: IQKVLLLNLLEALYS*LHLIPEFVATRCLP Trigger: AGGTAGACATCGGGTTGCCACAAACTCAGGAATCAGATGAAGCCAAGAATACAGAGCCTCTAATAGGTTTAGTAAGAGAACCTTCTGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024725.5 ENSMUST00000233544.2 |
||
| CDS GCA 90 bp | AAAGTGAGGTGTTGGGATTCCATACAAGTTAAACCTATGGAAGCTTaGCGGGTTATATTTTCGATTCTTTGCTTCTCCTGCAAAATAATC | + |
|
Preference number: 5 (lower is better) Translates to: KVRCWDSIQVKPMEA*RVIFSILCFSCKII Trigger: GATTATTTTGCAGGAGAAGCAAAGAATCGAAAATATAACCCGGCAAGCTTCCATAGGTTTAACTTGTATGGAATCCCAACACCTCACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024725.5 |
||
| CDS-3UTR CAA 90 bp | ATGAAATTAGTAGATATCAAAGTTGTAGTACTTTTCAGGCATTGTGGGAGTGCACAAACCTACAACAGGTaGCTTTTCCACTACAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: MKLVDIKVVVLFRHCGSAQTYNR*LFHYSI Trigger: GATGCTGTAGTGGAAAAGCAACCTGTTGTAGGTTTG...TGCACTCCCACAATGCCTGAAAAGTACTACAACTTTGATATCTACTAATTTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233544.2 |
||
| CDS TCA 72 bp | TGCTCTCTGCCGCCAGCGGACTTGCATGTACTGTGCTaGAAGGAGGGTGTAGTGTCCCTCCGTAGCGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: CSLPPADLHVLC*KEGVVSLRSEG Trigger: GCCTTCGCTACGGAGGGACACTACACCCTCCTTTCAGCACAGTACATGCAAGTCCGCTGGCGGCAGAGAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024725.5 ENSMUST00000233544.2 |
||
| CDS TCA 72 bp | ACTTGGCCAGCAAGGCACCCGATCAAAGAACTTCCCTaGGTATATGGGCCTGATGTTCCCTGGAGGCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: TWPARHPIKELP*VYGPDVPWRLH Trigger: GTGGAGCCTCCAGGGAACATCAGGCCCATATACTCAGGGAAGTTCTTTGATCGGGTGCCTTGCTGGCCAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024725.5 ENSMUST00000233544.2 |
||
| CDS CAA 72 bp | GGGTTCGGTGCTGCCGGGCTCCTTTTTCTCTTCCGGTaGTTGGGCAAATGGACATTCAGAAGGTTCTCTTAC | + |
|
Preference number: 6 (lower is better) Translates to: GFGAAGLLFLFR*LGKWTFRRFSY Trigger: GTAAGAGAACCTTCTGAATGTCCATTTGCCCAACAACCGGAAGAGAAAAAGGAGCCCGGCAGCACCGAACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024725.5 ENSMUST00000233544.2 |
||
| CDS TCA 72 bp | GTACCCTGTCTCTTATATCGTCCTTTTGCTCTGGGGTaGGTCCAAGTTCCGAGATTTCAGGTGCTCTCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: VPCLLYRPFALG*VQVPRFQVLSS Trigger: GGACGAGAGCACCTGAAATCTCGGAACTTGGACTCACCCCAGAGCAAAAGGACGATATAAGAGACAGGGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024725.5 ENSMUST00000233544.2 |
||
| CDS TCA 72 bp | CCCAGAGGTTTTGATCCCTGGAAGGCAGAGCCTTTGTaGAGTCCTAAATTACCCATCTCTGTGGGTGTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: PRGFDPWKAEPL*SPKLPISVGVP Trigger: TGGGACACCCACAGAGATGGGTAATTTAGGACTTCACAAAGGCTCTGCCTTCCAGGGATCAAAACCTCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024725.5 ENSMUST00000233544.2 |
||
| CDS GCA 72 bp | CTCAGGGAACTCATCTCTAACGGAGAAGCTGAAGTTTaGAAAGGTTTGGGGGACCCCACTCTCACAAACGAA | + |
|
Preference number: 6 (lower is better) Translates to: LRELISNGEAEV*KGLGDPTLTNE Trigger: TTCGTTTGTGAGAGTGGGGTCCCCCAAACCTTTGCAAACTTCAGCTTCTCCGTTAGAGATGAGTTCCCTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024725.5 ENSMUST00000233544.2 |
||
| CDS GCA 72 bp | TCCGGTTCTTTTCTCAGTTCCAAACCTACAACAGGTTaGTTTTCCACTACAGCATCCGTCCAAGCAGAACCC | + |
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Preference number: 6 (lower is better) Translates to: SGSFLSSKPTTG*FSTTASVQAEP Trigger: GGGTTCTGCTTGGACGGATGCTGTAGTGGAAAAGCAACCTGTTGTAGGTTTGGAACTGAGAAAAGAACCGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024725.5 ENSMUST00000233544.2 |
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| CDS CCA 72 bp | TCGGTGCTGCCGGGCTCCTTTTTCTCTTCCGGTTGTTaGGCAAATGGACATTCAGAAGGTTCTCTTACTAAA | + |
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Preference number: 6 (lower is better) Translates to: SVLPGSFFSSGC*ANGHSEGSLTK Trigger: TTTAGTAAGAGAACCTTCTGAATGTCCATTTGCCCAACAACCGGAAGAGAAAAAGGAGCCCGGCAGCACCGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024725.5 ENSMUST00000233544.2 |
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| CDS CCA 72 bp | CTTCTCAGTCAAACAGGTTGCAACTCTGTATCCAACTaGCTTAACTTTTCCTGCACTTGGCCAGCAAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: LLSQTGCNSVSN*LNFSCTWPARH Trigger: GTGCCTTGCTGGCCAAGTGCAGGAAAAGTTAAGCCAGTTGGATACAGAGTTGCAACCTGTTTGACTGAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024725.5 |
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| CDS TCA 72 bp | ATTAGAGGCTCTGTATTCTTGGCTTCATCTGATTCCTaGGTTTGTGGCAACCCGATGTCTACCTCCTTAGGG | + |
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Preference number: 6 (lower is better) Translates to: IRGSVFLASSDS*VCGNPMSTSLG Trigger: CCCTAAGGAGGTAGACATCGGGTTGCCACAAACTCAGGAATCAGATGAAGCCAAGAATACAGAGCCTCTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024725.5 ENSMUST00000233544.2 |
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| CDS CAA 72 bp | CTAATCCTACTCCAAGAGCATGGCAAGGTGGCGATTTaGCTTCTGATGATCCCATCCTCTCTCTCCATTTTC | + |
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Preference number: 6 (lower is better) Translates to: LILLQEHGKVAI*LLMIPSSLSIF Trigger: GAAAATGGAGAGAGAGGATGGGATCATCAGAAGCAAAATCGCCACCTTGCCATGCTCTTGGAGTAGGATTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024725.5 ENSMUST00000233544.2 |
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| CDS CAA 72 bp | TTCCGGTTCTTTTCTCAGTTCCAAACCTACAACAGGTaGCTTTTCCACTACAGCATCCGTCCAAGCAGAACC | + |
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Preference number: 6 (lower is better) Translates to: FRFFSQFQTYNR*LFHYSIRPSRT Trigger: GGTTCTGCTTGGACGGATGCTGTAGTGGAAAAGCAACCTGTTGTAGGTTTGGAACTGAGAAAAGAACCGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024725.5 ENSMUST00000233544.2 |
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| CDS GCA 72 bp | TCCATGTGTCAAATAAGGTGCAATTTGGGGGTCATTTaGTCTGCCATAAAATACTCTTTCTGCTCCAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SMCQIRCNLGVI*SAIKYSFCSSR Trigger: CCTGCTGGAGCAGAAAGAGTATTTTATGGCAGAGCAAATGACCCCCAAATTGCACCTTATTTGACACATGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024725.5 |
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| CDS CAA 72 bp | AATACTCTTTCTGCTCCAGCAGGTGGATATCTGAAGTaGAAATACTTCTTTGCCTCTGGGGGAGTCATTAGC | + |
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Preference number: 6 (lower is better) Translates to: NTLSAPAGGYLK*KYFFASGGVIS Trigger: GCTAATGACTCCCCCAGAGGCAAAGAAGTATTTCAACTTCAGATATCCACCTGCTGGAGCAGAAAGAGTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024725.5 |
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| CDS CAA 72 bp | GTCCATGTGTCAAATAAGGTGCAATTTGGGGGTCATTaGCTCTGCCATAAAATACTCTTTCTGCTCCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: VHVSNKVQFGGH*LCHKILFLLQQ Trigger: CTGCTGGAGCAGAAAGAGTATTTTATGGCAGAGCAAATGACCCCCAAATTGCACCTTATTTGACACATGGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024725.5 |
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| CDS CAA 72 bp | GACAGTTCTCTGATAGTCGGTGTCCCTAATGTTGTGTaGATCACATCCATTCCTTTTGGCAATCCTGGTGTT | + |
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Preference number: 6 (lower is better) Translates to: DSSLIVGVPNVV*ITSIPFGNPGV Trigger: AACACCAGGATTGCCAAAAGGAATGGATGTGATCAACACAACATTAGGGACACCGACTATCAGAGAACTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024725.5 |
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| CDS CCA 72 bp | GAAATAGTATGTCTTTCTAATCCTACTCCAAGAGCATaGCAAGGTGGCGATTTTGCTTCTGATGATCCCATC | + |
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Preference number: 6 (lower is better) Translates to: EIVCLSNPTPRA*QGGDFASDDPI Trigger: GATGGGATCATCAGAAGCAAAATCGCCACCTTGCCATGCTCTTGGAGTAGGATTAGAAAGACATACTATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024725.5 ENSMUST00000233544.2 |
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| CDS CCA 72 bp | TGCTCTGCCATAAAATACTCTTTCTGCTCCAGCAGGTaGATATCTGAAGTTGAAATACTTCTTTGCCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: CSAIKYSFCSSR*ISEVEILLCLW Trigger: CCAGAGGCAAAGAAGTATTTCAACTTCAGATATCCACCTGCTGGAGCAGAAAGAGTATTTTATGGCAGAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024725.5 |
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| CDS CCA 72 bp | TGTTGTGTTGATCACATCCATTCCTTTTGGCAATCCTaGTGTTTGATCATGAGATTTTCCCAATGGTGCTCG | + |
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Preference number: 6 (lower is better) Translates to: CCVDHIHSFWQS*CLIMRFSQWCS Trigger: CGAGCACCATTGGGAAAATCTCATGATCAAACACCAGGATTGCCAAAAGGAATGGATGTGATCAACACAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024725.5 |
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| CDS CCA 72 bp | CTGTCCTTCTTTAAGCACATCTTCGAAGGATTTCGATaGATTCACAGTGTCACGAACAGACAGTTCTCTGAT | + |
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Preference number: 6 (lower is better) Translates to: LSFFKHIFEGFR*IHSVTNRQFSD Trigger: ATCAGAGAACTGTCTGTTCGTGACACTGTGAATCCATCGAAATCCTTCGAAGATGTGCTTAAAGAAGGACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024725.5 |
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| CDS GCA 72 bp | TGTTGGGATTCCATACAAGTTAAACCTATGGAAGCTTaGCGGGTTATATTTTCGATTCTTTGCTTCTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: CWDSIQVKPMEA*RVIFSILCFSC Trigger: GCAGGAGAAGCAAAGAATCGAAAATATAACCCGGCAAGCTTCCATAGGTTTAACTTGTATGGAATCCCAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024725.5 |
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| CDS CCA 72 bp | TGGCAATCCTGGTGTTTGATCATGAGATTTTCCCAATaGTGCTCGTTGATGGCTAAAATATATAGATTCTTT | + |
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Preference number: 6 (lower is better) Translates to: WQSWCLIMRFSQ*CSLMAKIYRFF Trigger: AAAGAATCTATATATTTTAGCCATCAACGAGCACCATTGGGAAAATCTCATGATCAAACACCAGGATTGCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024725.5 |
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