Pregenerated sensors for EFEMP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024909Ensembl transcript IDs: ENSMUST00000070118.14, ENSMUST00000164204.2, ENSMUST00000164388.2, ENSMUST00000165485.8, ENSMUST00000166253.8, ENSMUST00000166303.9, ENSMUST00000167304.8, ENSMUST00000167371.8, ENSMUST00000167827.2, ENSMUST00000168330.2, ENSMUST00000169943.8, ENSMUST00000235523.2, ENSMUST00000236518.2
Found 216 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | GCCCTGCGGGCAAGGGTTTGGTTGTTGAGCATGGGCCGCTGGCGGTaGAGGTCCTTCACCATGGAGATCACTGATGACGGCAGCAGAGCG | + |
Preference number: 1 (lower is better) Translates to: ALRARVWLLSMGRWR*RSFTMEITDDGSRA Trigger: CGCTCTGCTGCCGTCATCAGTGATCTCCATGGTGAAGGACCTCCACCGCCAGCGGCCCATGCTCAACAACCAAACCCTTGCCCGCAGGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169943.8 |
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3UTR CCA 90 bp | GGTGACCATCTCCAGGTCCAGCACGTACTCCCGGGGTCCCGTCACTaGCCTGGCGAGGACCAGCATGGCGCTGACATTGTTGATTTGCCT | + |
Preference number: 1 (lower is better) Translates to: GDHLQVQHVLPGSRH*PGEDQHGADIVDLP Trigger: AGGCAAATCAACAATGTCAGCGCCATGCTGGTCCTCGCCAGGCCAGTGACGGGACCCCGGGAGTACGTGCTGGACCTGGAGATGGTCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168330.2 |
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3UTR CCA 90 bp | CTCGTAGCCCTGCGGGCAAGGGTTTGGTTGTTGAGCATGGGCCGCTaGCGGTGGAGGTCCTTCACCATGGAGATCACTGATGACGGCAGC | + |
Preference number: 1 (lower is better) Translates to: LVALRARVWLLSMGR*RWRSFTMEITDDGS Trigger: GCTGCCGTCATCAGTGATCTCCATGGTGAAGGACCTCCACCGCCAGCGGCCCATGCTCAACAACCAAACCCTTGCCCGCAGGGCTACGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169943.8 |
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3UTR TCA 90 bp | GCTCATAGCCCTGGTTACAGCGACACAGGAAGGTCCCATAGGAGTTaGAGCAGCGCTGCTCACATGGGGCTCCCATGTCACACTCATTCA | + |
Preference number: 1 (lower is better) Translates to: AHSPGYSDTGRSHRS*SSAAHMGLPCHTHS Trigger: TGAATGAGTGTGACATGGGAGCCCCATGTGAGCAGCGCTGCTTCAACTCCTATGGGACCTTCCTGTGTCGCTGTAACCAGGGCTATGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169943.8 |
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3UTR CCA 90 bp | ACACAAGAGCGGTTGTTAGGTCCCAACTGGAAGCCTGGCTCACACTaGCATCGAAAAGAGCCCGGCAGGTTCACACATCGATGCTGGCAA | + |
Preference number: 1 (lower is better) Translates to: TQERLLGPNWKPGSH*HRKEPGRFTHRCWQ Trigger: TTGCCAGCATCGATGTGTGAACCTGCCGGGCTCTTTTCGATGCCAGTGTGAGCCAGGCTTCCAGTTGGGACCTAACAACCGCTCTTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169943.8 |
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3UTR CCA 90 bp | GCGACACAGGAAGGTCCCATAGGAGTTGAAGCAGCGCTGCTCACATaGGGCTCCCATGTCACACTCATTCACATCCACACAAGAGCGGTT | + |
Preference number: 1 (lower is better) Translates to: ATQEGPIGVEAALLT*GSHVTLIHIHTRAV Trigger: AACCGCTCTTGTGTGGATGTGAATGAGTGTGACATGGGAGCCCCATGTGAGCAGCGCTGCTTCAACTCCTATGGGACCTTCCTGTGTCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169943.8 |
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3UTR CCA 90 bp | ATTCACATCCACACAAGAGCGGTTGTTAGGTCCCAACTGGAAGCCTaGCTCACACTGGCATCGAAAAGAGCCCGGCAGGTTCACACATCG | + |
Preference number: 1 (lower is better) Translates to: IHIHTRAVVRSQLEA*LTLASKRARQVHTS Trigger: CGATGTGTGAACCTGCCGGGCTCTTTTCGATGCCAGTGTGAGCCAGGCTTCCAGTTGGGACCTAACAACCGCTCTTGTGTGGATGTGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169943.8 |
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3UTR CCA 90 bp | TCACACTCATTCACATCCACACAAGAGCGGTTGTTAGGTCCCAACTaGAAGCCTGGCTCACACTGGCATCGAAAAGAGCCCGGCAGGTTC | + |
Preference number: 1 (lower is better) Translates to: SHSFTSTQERLLGPN*KPGSHWHRKEPGRF Trigger: GAACCTGCCGGGCTCTTTTCGATGCCAGTGTGAGCCAGGCTTCCAGTTGGGACCTAACAACCGCTCTTGTGTGGATGTGAATGAGTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169943.8 |
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3UTR-3UTR TCA 90 bp | AGCCATCCCGGTGCAGCTCATAGCCCTGGTTACAGCGACACAGGAAGGTCCCATAGGTTATGGCAGTCCTaGCTAGGGCGACAGTCATGC | + |
Preference number: 2 (lower is better) Translates to: SHPGAAHSPGYSDTGRSHRLWQS*LGRQSC Trigger: GCATGACTGTCGCCCTAGTCAGGACTGCCATAACCT...ATGGGACCTTCCTGTGTCGCTGTAACCAGGGCTATGAGCTGCACCGGGATGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169943.8 |
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3UTR-3UTR GCA 90 bp | GCAGGAGAAGCCATCCCGGTGCAGCTCATAGCCCTGGTTACAGCGACACAGGAACTAGGGCGACAGTCATaGAAAGCCTGGGTACACTCG | + |
Preference number: 2 (lower is better) Translates to: AGEAIPVQLIALVTATQELGRQS*KAWVHS Trigger: CGAGTGTACCCAGGCTTTGCATGACTGTCGCCCTAG...TTCCTGTGTCGCTGTAACCAGGGCTATGAGCTGCACCGGGATGGCTTCTCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169943.8 |
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3UTR-3UTR GCA 90 bp | AAACTCCTAGCACTGACCAGAACATGGTTCCTGGGCCCAGTATCAGCCAAGCTCGGTGTGCGCCACCACTaGCCACTGCTCAGGCTGATT | + |
Preference number: 2 (lower is better) Translates to: KLLALTRTWFLGPVSAKLGVRHH*PLLRLI Trigger: AATCAGCCTGAGCAGTGGGCAGTGGTGGCGCACACC...GAGCTTGGCTGATACTGGGCCCAGGAACCATGTTCTGGTCAGTGCTAGGAGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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3UTR-3UTR TCA 90 bp | AGAACATGGTTCCTGGGCCCAGTATCAGCCAAGCTCTTGAGTGAGGACCTGAGGTGCCTCTGTCTCCCCTaGGTGCTGGGATTAAAGGTG | + |
Preference number: 2 (lower is better) Translates to: RTWFLGPVSAKLLSEDLRCLCLP*VLGLKV Trigger: CACCTTTAATCCCAGCACTCAGGGGAGACAGAGGCA...CCTCAGGTCCTCACTCAAGAGCTTGGCTGATACTGGGCCCAGGAACCATGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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3UTR-3UTR CCA 90 bp | GCACTGACCAGAACATGGTTCCTGGGCCCAGTATCAGCCAAGCTCTTGAGTGAGAAACCTCAGCCTGACTaGAGAGGACCCCTTGTGTGG | + |
Preference number: 2 (lower is better) Translates to: ALTRTWFLGPVSAKLLSEKPQPD*RGPLVW Trigger: CCACACAAGGGGTCCTCTCCAGTCAGGCTGAGGTTT...CTCACTCAAGAGCTTGGCTGATACTGGGCCCAGGAACCATGTTCTGGTCAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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3UTR CAA 90 bp | CATGGGGCTCCCATGTCACACTCATTCACATCCACACAAGAGCGGTaGTTAGGTCCCAACTGGAAGCCTGGCTCACACTGGCATCGAAAA | + |
Preference number: 2 (lower is better) Translates to: HGAPMSHSFTSTQER*LGPNWKPGSHWHRK Trigger: TTTTCGATGCCAGTGTGAGCCAGGCTTCCAGTTGGGACCTAACAACCGCTCTTGTGTGGATGTGAATGAGTGTGACATGGGAGCCCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169943.8 |
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3UTR-3UTR GCA 90 bp | CAGCCAGGACTCCTTCTTTCTCCCTTTATTGTCCTTCACATCATAGTTCCTTTACTAGGCCCCCGGGGCTaGTTAAGCTATGGGAGGGGG | + |
Preference number: 2 (lower is better) Translates to: QPGLLLSPFIVLHIIVPLLGPRG*LSYGRG Trigger: CCCCCTCCCATAGCTTAAGCAGCCCCGGGGGCCTAG...TAAAGGAACTATGATGTGAAGGACAATAAAGGGAGAAAGAAGGAGTCCTGGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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3UTR-3UTR CCA 90 bp | CTCACATGGGGCTCCCATGTCACACTCATTCACATCCACACAAGAGCGGTTGTTCAGTCATGCAAAGCCTaGGTACACTCGTCCACATCC | + |
Preference number: 2 (lower is better) Translates to: LTWGSHVTLIHIHTRAVVQSCKA*VHSSTS Trigger: GGATGTGGACGAGTGTACCCAGGCTTTGCATGACTG...AACAACCGCTCTTGTGTGGATGTGAATGAGTGTGACATGGGAGCCCCATGTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169943.8 |
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3UTR-3UTR CCA 90 bp | AAACTCCTAGCACTGACCAGAACATGGTTCCTGGGCCCAGTATCAGCCAAGCTCCTCTGTAGATCAGGCTaGCCTCGAACTCAGAAATCC | + |
Preference number: 2 (lower is better) Translates to: KLLALTRTWFLGPVSAKLLCRSG*PRTQKS Trigger: GGATTTCTGAGTTCGAGGCCAGCCTGATCTACAGAG...GAGCTTGGCTGATACTGGGCCCAGGAACCATGTTCTGGTCAGTGCTAGGAGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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3UTR-3UTR TCA 90 bp | ACCCTAAATATGGATGGCTGGATAATAGATAAACACTCCTTAGGGGCTGGGAATTGCCTCTGTCTCCCCTaGGTGCTGGGATTAAAGGTG | + |
Preference number: 2 (lower is better) Translates to: TLNMDGWIIDKHSLGAGNCLCLP*VLGLKV Trigger: CACCTTTAATCCCAGCACTCAGGGGAGACAGAGGCA...ATTCCCAGCCCCTAAGGAGTGTTTATCTATTATCCAGCCATCCATATTTAGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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3UTR-3UTR CCA 90 bp | ACCCTAAATATGGATGGCTGGATAATAGATAAACACTCCTTAGGGGCTGGGAATCCAGAACATGGTTCCTaGGCCCAGTATCAGCCAAGC | + |
Preference number: 2 (lower is better) Translates to: TLNMDGWIIDKHSLGAGNPEHGS*AQYQPS Trigger: GCTTGGCTGATACTGGGCCCAGGAACCATGTTCTGG...ATTCCCAGCCCCTAAGGAGTGTTTATCTATTATCCAGCCATCCATATTTAGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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3UTR-3UTR CCA 90 bp | ACCCTAAATATGGATGGCTGGATAATAGATAAACACTCCTTAGGGGCTGGGAATCCTCATTCTAGTGACTaGAGACCAGAGGCTTGTACA | + |
Preference number: 2 (lower is better) Translates to: TLNMDGWIIDKHSLGAGNPHSSD*RPEACT Trigger: TGTACAAGCCTCTGGTCTCCAGTCACTAGAATGAGG...ATTCCCAGCCCCTAAGGAGTGTTTATCTATTATCCAGCCATCCATATTTAGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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3UTR TCA 72 bp | CACCTGCCCCTCTCGCAGGCCAGCCCCTTCCCGGGCTaGGGTTACTCACCCACCTCAGCCAGGACTCCTTCT | + |
Preference number: 3 (lower is better) Translates to: HLPLSQASPFPG*GYSPTSARTPS Trigger: AGAAGGAGTCCTGGCTGAGGTGGGTGAGTAACCTCAGCCCGGGAAGGGGCTGGCCTGCGAGAGGGGCAGGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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3UTR CCA 72 bp | CTCCAGGTCCAGCACGTACTCCCGGGGTCCCGTCACTaGCCTGGCGAGGACCAGCATGGCGCTGACATTGTT | + |
Preference number: 3 (lower is better) Translates to: LQVQHVLPGSRH*PGEDQHGADIV Trigger: AACAATGTCAGCGCCATGCTGGTCCTCGCCAGGCCAGTGACGGGACCCCGGGAGTACGTGCTGGACCTGGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168330.2 |
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3UTR-3UTR CAA 90 bp | CAGGAAGGTCCCATAGGAGTTGAAGCAGCGCTGCTCACATGGGGCTCCCATGTCGCAAGGGTTTGGTTGTaGAGCATGGGCCGCTGGCGG | + |
Preference number: 3 (lower is better) Translates to: QEGPIGVEAALLTWGSHVARVWL*SMGRWR Trigger: CCGCCAGCGGCCCATGCTCAACAACCAAACCCTTGC...GACATGGGAGCCCCATGTGAGCAGCGCTGCTTCAACTCCTATGGGACCTTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169943.8 |
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3UTR CCA 72 bp | CTTCTGACACGGCCCCTGCTTCCTAGGACAGGGCTTTaGGAGCAGAGGCAGGGCAGCTCCCACTTACATGAC | + |
Preference number: 3 (lower is better) Translates to: LLTRPLLPRTGL*EQRQGSSHLHD Trigger: GTCATGTAAGTGGGAGCTGCCCTGCCTCTGCTCCCAAAGCCCTGTCCTAGGAAGCAGGGGCCGTGTCAGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164388.2 |
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3UTR CCA 72 bp | GCAAGGGTTTGGTTGTTGAGCATGGGCCGCTGGCGGTaGAGGTCCTTCACCATGGAGATCACTGATGACGGC | + |
Preference number: 3 (lower is better) Translates to: ARVWLLSMGRWR*RSFTMEITDDG Trigger: GCCGTCATCAGTGATCTCCATGGTGAAGGACCTCCACCGCCAGCGGCCCATGCTCAACAACCAAACCCTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169943.8 |
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3UTR CCA 72 bp | CTGCGGGCAAGGGTTTGGTTGTTGAGCATGGGCCGCTaGCGGTGGAGGTCCTTCACCATGGAGATCACTGAT | + |
Preference number: 3 (lower is better) Translates to: LRARVWLLSMGR*RWRSFTMEITD Trigger: ATCAGTGATCTCCATGGTGAAGGACCTCCACCGCCAGCGGCCCATGCTCAACAACCAAACCCTTGCCCGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169943.8 |
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3UTR TCA 72 bp | CCTGGTTACAGCGACACAGGAAGGTCCCATAGGAGTTaGAGCAGCGCTGCTCACATGGGGCTCCCATGTCAC | + |
Preference number: 3 (lower is better) Translates to: PGYSDTGRSHRS*SSAAHMGLPCH Trigger: GTGACATGGGAGCCCCATGTGAGCAGCGCTGCTTCAACTCCTATGGGACCTTCCTGTGTCGCTGTAACCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169943.8 |
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3UTR CCA 72 bp | CGGTTGTTAGGTCCCAACTGGAAGCCTGGCTCACACTaGCATCGAAAAGAGCCCGGCAGGTTCACACATCGA | + |
Preference number: 3 (lower is better) Translates to: RLLGPNWKPGSH*HRKEPGRFTHR Trigger: TCGATGTGTGAACCTGCCGGGCTCTTTTCGATGCCAGTGTGAGCCAGGCTTCCAGTTGGGACCTAACAACCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169943.8 |
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3UTR TCA 72 bp | AGAACTGCCTGTAGCGTGCTTACTAGGAGACAACTCTaGCTTCTGACACGGCCCCTGCTTCCTAGGACAGGG | + |
Preference number: 3 (lower is better) Translates to: RTACSVLTRRQL*LLTRPLLPRTG Trigger: CCCTGTCCTAGGAAGCAGGGGCCGTGTCAGAAGTCAGAGTTGTCTCCTAGTAAGCACGCTACAGGCAGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164388.2 |
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3UTR CCA 72 bp | TTCACATCCACACAAGAGCGGTTGTTAGGTCCCAACTaGAAGCCTGGCTCACACTGGCATCGAAAAGAGCCC | + |
Preference number: 3 (lower is better) Translates to: FTSTQERLLGPN*KPGSHWHRKEP Trigger: GGGCTCTTTTCGATGCCAGTGTGAGCCAGGCTTCCAGTTGGGACCTAACAACCGCTCTTGTGTGGATGTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169943.8 |
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3UTR CCA 72 bp | GAAGGTCCCATAGGAGTTGAAGCAGCGCTGCTCACATaGGGCTCCCATGTCACACTCATTCACATCCACACA | + |
Preference number: 3 (lower is better) Translates to: EGPIGVEAALLT*GSHVTLIHIHT Trigger: TGTGTGGATGTGAATGAGTGTGACATGGGAGCCCCATGTGAGCAGCGCTGCTTCAACTCCTATGGGACCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169943.8 |
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3UTR TCA 72 bp | ATTCTGAAGAATGACCTTGGCTCTGAAACCTCAGCCTaGCTGGAGAGGACCCCTTGTGTGGAACTCACCTGC | + |
Preference number: 3 (lower is better) Translates to: ILKNDLGSETSA*LERTPCVELTC Trigger: GCAGGTGAGTTCCACACAAGGGGTCCTCTCCAGTCAGGCTGAGGTTTCAGAGCCAAGGTCATTCTTCAGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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3UTR TCA 72 bp | ATGGTTCCTGGGCCCAGTATCAGCCAAGCTCTTGAGTaGGGACCTGAGGTACATACTCTTCAGAACTCCCTG | + |
Preference number: 3 (lower is better) Translates to: MVPGPSISQALE*GPEVHTLQNSL Trigger: CAGGGAGTTCTGAAGAGTATGTACCTCAGGTCCTCACTCAAGAGCTTGGCTGATACTGGGCCCAGGAACCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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3UTR GCA 72 bp | ATTCGGGTCCAATTTTTCGGTAACCATCAGGGCAGGTaGACTGGTAGGAGCCAGGAAGGTTATGGCAGTCCT | + |
Preference number: 3 (lower is better) Translates to: IRVQFFGNHQGR*TGRSQEGYGSP Trigger: AGGACTGCCATAACCTTCCTGGCTCCTACCAGTGCACCTGCCCTGATGGTTACCGAAAAATTGGACCCGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169943.8 |
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3UTR CCA 72 bp | GATGCTAACCCCAAACTCCTAGCACTGACCAGAACATaGTTCCTGGGCCCAGTATCAGCCAAGCTCTTGAGT | + |
Preference number: 3 (lower is better) Translates to: DANPKLLALTRT*FLGPVSAKLLS Trigger: ACTCAAGAGCTTGGCTGATACTGGGCCCAGGAACCATGTTCTGGTCAGTGCTAGGAGTTTGGGGTTAGCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | ACACGGCCCCTGCTTCCTAGGACAGGGCTTTGGGAGCAGAGGCAGGGCAGCTCCATCGGCCTGGCTCGTTaGCACAGCGGTACTGGCAGA | + |
Preference number: 4 (lower is better) Translates to: TRPLLPRTGLWEQRQGSSIGLAR*HSGTGR Trigger: TCTGCCAGTACCGCTGTGTCAACGAGCCAGGCCGAT...GGAGCTGCCCTGCCTCTGCTCCCAAAGCCCTGTCCTAGGAAGCAGGGGCCGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164388.2 |
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CDS-3UTR CCA 90 bp | ACACGGCCCCTGCTTCCTAGGACAGGGCTTTGGGAGCAGAGGCAGGGCAGCTCCCTCGACAAAGGGGATTaGAGGCAGGGCAGAGGCAGC | + |
Preference number: 4 (lower is better) Translates to: TRPLLPRTGLWEQRQGSSLDKGD*RQGRGS Trigger: GCTGCCTCTGCCCTGCCTCCAATCCCCTTTGTCGAG...GGAGCTGCCCTGCCTCTGCTCCCAAAGCCCTGTCCTAGGAAGCAGGGGCCGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164388.2 |
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CDS-3UTR CCA 90 bp | TTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGGGGGTCCCGTCACTGGCCTaGCGAGGACCAGCATGGCGC | + |
Preference number: 4 (lower is better) Translates to: LSRTVIPRPPGLLKLWEGVPSLA*RGPAWR Trigger: GCGCCATGCTGGTCCTCGCCAGGCCAGTGACGGGAC...CCCCTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CCA 90 bp | TTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGGGGCCGGGGTCCCGTCACTaGCCTGGCGAGGACCAGCAT | + |
Preference number: 4 (lower is better) Translates to: LSRTVIPRPPGLLKLWEGPGSRH*PGEDQH Trigger: ATGCTGGTCCTCGCCAGGCCAGTGACGGGACCCCGG...CCCCTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CCA 90 bp | CCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGGTCCCGTCACTGGCCTaGCGAGGACCAGCATGGCGC | + |
Preference number: 4 (lower is better) Translates to: PLSRTVIPRPPGLLKLWEVPSLA*RGPAWR Trigger: GCGCCATGCTGGTCCTCGCCAGGCCAGTGACGGGAC...CTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CCA 90 bp | GTCCTGACTAGGGCGACAGTCATGCAAAGCCTGGGTACACTCGTCCACATCCACGCACAGCCAGTCACCTaGGCTGGCCCCCGGCAGTGC | + |
Preference number: 4 (lower is better) Translates to: VLTRATVMQSLGTLVHIHAQPVT*AGPRQC Trigger: GCACTGCCGGGGGCCAGCCCAGGTGACTGGCTGTGC...GTGGATGTGGACGAGTGTACCCAGGCTTTGCATGACTGTCGCCCTAGTCAGGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169943.8 |
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CDS-3UTR TCA 90 bp | TTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGGGGCAAAAGGGAGCATCCTaGGGCTGGGAGGTGGTGGGC | + |
Preference number: 4 (lower is better) Translates to: LSRTVIPRPPGLLKLWEGQKGAS*GWEVVG Trigger: GCCCACCACCTCCCAGCCTCAGGATGCTCCCTTTTG...CCCCTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000070118.14 |
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CDS-3UTR TCA 90 bp | ACACGGCCCCTGCTTCCTAGGACAGGGCTTTGGGAGCAGAGGCAGGGCAGCTCCAACCCCCATGGAAGTTaGCACAGGTTTGGGCCTCAG | + |
Preference number: 4 (lower is better) Translates to: TRPLLPRTGLWEQRQGSSNPHGS*HRFGPQ Trigger: CTGAGGCCCAAACCTGTGTCAACTTCCATGGGGGTT...GGAGCTGCCCTGCCTCTGCTCCCAAAGCCCTGTCCTAGGAAGCAGGGGCCGTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164388.2 |
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CDS-3UTR TCA 90 bp | ACACGGCCCCTGCTTCCTAGGACAGGGCTTTGGGAGCAGAGGCAGGGCAGCTCCGCGGTGCACAATGGATaGAGGCTGCTCTCGACAAAG | + |
Preference number: 4 (lower is better) Translates to: TRPLLPRTGLWEQRQGSSAVHNG*RLLSTK Trigger: CTTTGTCGAGAGCAGCCTTCATCCATTGTGCACCGC...GGAGCTGCCCTGCCTCTGCTCCCAAAGCCCTGTCCTAGGAAGCAGGGGCCGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164388.2 |
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CDS-3UTR TCA 90 bp | ACACGGCCCCTGCTTCCTAGGACAGGGCTTTGGGAGCAGAGGCAGGGCAGCTCCCACTTCGCTCTGAGGTaGTGCTCATGTAGCGGTGCA | + |
Preference number: 4 (lower is better) Translates to: TRPLLPRTGLWEQRQGSSHFALR*CSCSGA Trigger: TGCACCGCTACATGAGCATCACCTCAGAGCGAAGTG...GGAGCTGCCCTGCCTCTGCTCCCAAAGCCCTGTCCTAGGAAGCAGGGGCCGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164388.2 |
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CDS-3UTR TCA 90 bp | ACACGGCCCCTGCTTCCTAGGACAGGGCTTTGGGAGCAGAGGCAGGGCAGCTCCGAGGTTGCCTGGATCTaGAACACGTCAGCAGGCACA | + |
Preference number: 4 (lower is better) Translates to: TRPLLPRTGLWEQRQGSSEVAWI*NTSAGT Trigger: TGTGCCTGCTGACGTGTTTCAGATCCAGGCAACCTC...GGAGCTGCCCTGCCTCTGCTCCCAAAGCCCTGTCCTAGGAAGCAGGGGCCGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164388.2 |
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CDS-3UTR GCA 90 bp | GTCCTGACTAGGGCGACAGTCATGCAAAGCCTGGGTACACTCGTCCACATCCACGCTGGCCCCCGGCAGTaGTGGCTGTCTGCATCCCAC | + |
Preference number: 4 (lower is better) Translates to: VLTRATVMQSLGTLVHIHAGPRQ*WLSASH Trigger: GTGGGATGCAGACAGCCAGCACTGCCGGGGGCCAGC...GTGGATGTGGACGAGTGTACCCAGGCTTTGCATGACTGTCGCCCTAGTCAGGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169943.8 |
||
CDS-3UTR CCA 90 bp | AGAAGCCATCCCGGTGCAGCTCATAGCCCTGGTTACAGCGACACAGGAAGGTCCCAGAGAGGGGCCTGCTaGGCACAGCCAGTCACCTGG | + |
Preference number: 4 (lower is better) Translates to: RSHPGAAHSPGYSDTGRSQRGAC*AQPVTW Trigger: CCAGGTGACTGGCTGTGCCCAGCAGGCCCCTCTCTG...GGACCTTCCTGTGTCGCTGTAACCAGGGCTATGAGCTGCACCGGGATGGCTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169943.8 |
||
CDS-3UTR TCA 90 bp | TTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGGGGATCGGCCTGGCTCGTTaGCACAGCGGTACTGGCAGA | + |
Preference number: 4 (lower is better) Translates to: LSRTVIPRPPGLLKLWEGIGLAR*HSGTGR Trigger: TCTGCCAGTACCGCTGTGTCAACGAGCCAGGCCGAT...CCCCTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | ATGGTGACCATCTCCAGGTCCAGCACGTACTCCCGGGGTCCCGTCACTGGCCTGAACCCCCATGGAAGTTaGCACAGGTTTGGGCCTCAG | + |
Preference number: 4 (lower is better) Translates to: MVTISRSSTYSRGPVTGLNPHGS*HRFGPQ Trigger: CTGAGGCCCAAACCTGTGTCAACTTCCATGGGGGTT...CAGGCCAGTGACGGGACCCCGGGAGTACGTGCTGGACCTGGAGATGGTCACCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168330.2 |
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CDS-3UTR CCA 90 bp | TTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGGGGGCAGCGCTGCTCACATaGGGCTCCCATGTCACACTC | + |
Preference number: 4 (lower is better) Translates to: LSRTVIPRPPGLLKLWEGAALLT*GSHVTL Trigger: GAGTGTGACATGGGAGCCCCATGTGAGCAGCGCTGC...CCCCTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CCA 90 bp | TTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGGGGCTCGACAAAGGGGATTaGAGGCAGGGCAGAGGCAGC | + |
Preference number: 4 (lower is better) Translates to: LSRTVIPRPPGLLKLWEGLDKGD*RQGRGS Trigger: GCTGCCTCTGCCCTGCCTCCAATCCCCTTTGTCGAG...CCCCTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CCA 90 bp | ACACGGCCCCTGCTTCCTAGGACAGGGCTTTGGGAGCAGAGGCAGGGCAGCTCCTGTAGCGGTGCACAATaGATGAAGGCTGCTCTCGAC | + |
Preference number: 4 (lower is better) Translates to: TRPLLPRTGLWEQRQGSSCSGAQ*MKAALD Trigger: GTCGAGAGCAGCCTTCATCCATTGTGCACCGCTACA...GGAGCTGCCCTGCCTCTGCTCCCAAAGCCCTGTCCTAGGAAGCAGGGGCCGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164388.2 |
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CDS-3UTR CCA 90 bp | AGAACATGGTTCCTGGGCCCAGTATCAGCCAAGCTCTTGAGTGAGGACCTGAGGCCGGGGTCCCGTCACTaGCCTGGCGAGGACCAGCAT | + |
Preference number: 4 (lower is better) Translates to: RTWFLGPVSAKLLSEDLRPGSRH*PGEDQH Trigger: ATGCTGGTCCTCGCCAGGCCAGTGACGGGACCCCGG...CCTCAGGTCCTCACTCAAGAGCTTGGCTGATACTGGGCCCAGGAACCATGTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | CCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGATCGGCCTGGCTCGTTaGCACAGCGGTACTGGCAGA | + |
Preference number: 4 (lower is better) Translates to: PLSRTVIPRPPGLLKLWEIGLAR*HSGTGR Trigger: TCTGCCAGTACCGCTGTGTCAACGAGCCAGGCCGAT...CTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR GCA 90 bp | TTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGGGGATCCTGTGGGGACGCTaGTCCCAAGAGCAACAGCAG | + |
Preference number: 4 (lower is better) Translates to: LSRTVIPRPPGLLKLWEGILWGR*SQEQQQ Trigger: CTGCTGTTGCTCTTGGGAGCAGCGTCCCCACAGGAT...CCCCTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
||
CDS-3UTR GCA 90 bp | TTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGGGGTTGACATCCCGGCAGTaGTGGCTGTCTGCATCCCAC | + |
Preference number: 4 (lower is better) Translates to: LSRTVIPRPPGLLKLWEGLTSRQ*WLSASH Trigger: GTGGGATGCAGACAGCCAGCACTGCCGGGATGTCAA...CCCCTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR GCA 90 bp | TTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGGGGGAGTTGAAGCAGCGCTaGTCACATGGGGCTCCCATG | + |
Preference number: 4 (lower is better) Translates to: LSRTVIPRPPGLLKLWEGELKQR*SHGAPM Trigger: CATGGGAGCCCCATGTGAGCAGCGCTGCTTCAACTC...CCCCTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CCA 90 bp | CCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGGCAGCGCTGCTCACATaGGGCTCCCATGTCACACTC | + |
Preference number: 4 (lower is better) Translates to: PLSRTVIPRPPGLLKLWEAALLT*GSHVTL Trigger: GAGTGTGACATGGGAGCCCCATGTGAGCAGCGCTGC...CTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CCA 90 bp | ACACGGCCCCTGCTTCCTAGGACAGGGCTTTGGGAGCAGAGGCAGGGCAGCTCCTGGGCCTCAGAACATTaGTGTGCACCTGTTTCACAC | + |
Preference number: 4 (lower is better) Translates to: TRPLLPRTGLWEQRQGSSWASEH*CAPVSH Trigger: GTGTGAAACAGGTGCACACCAATGTTCTGAGGCCCA...GGAGCTGCCCTGCCTCTGCTCCCAAAGCCCTGTCCTAGGAAGCAGGGGCCGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164388.2 |
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CDS-3UTR CCA 90 bp | CCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGCTCGACAAAGGGGATTaGAGGCAGGGCAGAGGCAGC | + |
Preference number: 4 (lower is better) Translates to: PLSRTVIPRPPGLLKLWELDKGD*RQGRGS Trigger: GCTGCCTCTGCCCTGCCTCCAATCCCCTTTGTCGAG...CTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CCA 90 bp | CTGGGCCCAGTATCAGCCAAGCTCTTGAGTGAGGACCTGAGGTACATACTCTTCGTCCCGTCACTGGCCTaGCGAGGACCAGCATGGCGC | + |
Preference number: 4 (lower is better) Translates to: LGPVSAKLLSEDLRYILFVPSLA*RGPAWR Trigger: GCGCCATGCTGGTCCTCGCCAGGCCAGTGACGGGAC...GAAGAGTATGTACCTCAGGTCCTCACTCAAGAGCTTGGCTGATACTGGGCCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CCA 90 bp | AAACTCCTAGCACTGACCAGAACATGGTTCCTGGGCCCAGTATCAGCCAAGCTCGTCCCGTCACTGGCCTaGCGAGGACCAGCATGGCGC | + |
Preference number: 4 (lower is better) Translates to: KLLALTRTWFLGPVSAKLVPSLA*RGPAWR Trigger: GCGCCATGCTGGTCCTCGCCAGGCCAGTGACGGGAC...GAGCTTGGCTGATACTGGGCCCAGGAACCATGTTCTGGTCAGTGCTAGGAGTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CCA 90 bp | ATCATAGTTCCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCCGGGGTCCCGTCACTaGCCTGGCGAGGACCAGCAT | + |
Preference number: 4 (lower is better) Translates to: IIVPLSRTVIPRPPGLLKPGSRH*PGEDQH Trigger: ATGCTGGTCCTCGCCAGGCCAGTGACGGGACCCCGG...CTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGGAACTATGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CCA 90 bp | AAACTCCTAGCACTGACCAGAACATGGTTCCTGGGCCCAGTATCAGCCAAGCTCCCGGGGTCCCGTCACTaGCCTGGCGAGGACCAGCAT | + |
Preference number: 4 (lower is better) Translates to: KLLALTRTWFLGPVSAKLPGSRH*PGEDQH Trigger: ATGCTGGTCCTCGCCAGGCCAGTGACGGGACCCCGG...GAGCTTGGCTGATACTGGGCCCAGGAACCATGTTCTGGTCAGTGCTAGGAGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | TTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGGGGAGGTCCCATAGGAGTTaGAGCAGCGCTGCTCACATG | + |
Preference number: 4 (lower is better) Translates to: LSRTVIPRPPGLLKLWEGRSHRS*SSAAHM Trigger: CATGTGAGCAGCGCTGCTTCAACTCCTATGGGACCT...CCCCTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | TTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGGGGAACCCCCATGGAAGTTaGCACAGGTTTGGGCCTCAG | + |
Preference number: 4 (lower is better) Translates to: LSRTVIPRPPGLLKLWEGNPHGS*HRFGPQ Trigger: CTGAGGCCCAAACCTGTGTCAACTTCCATGGGGGTT...CCCCTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | TTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGGGGCACTTCGCTCTGAGGTaGTGCTCATGTAGCGGTGCA | + |
Preference number: 4 (lower is better) Translates to: LSRTVIPRPPGLLKLWEGHFALR*CSCSGA Trigger: TGCACCGCTACATGAGCATCACCTCAGAGCGAAGTG...CCCCTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | TTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGGGGGAGGTTGCCTGGATCTaGAACACGTCAGCAGGCACA | + |
Preference number: 4 (lower is better) Translates to: LSRTVIPRPPGLLKLWEGEVAWI*NTSAGT Trigger: TGTGCCTGCTGACGTGTTTCAGATCCAGGCAACCTC...CCCCTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | TTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGGGGCTCCCACAAAGACCGTaGGTCTCAGTACAGAGCTGG | + |
Preference number: 4 (lower is better) Translates to: LSRTVIPRPPGLLKLWEGLPQRP*VSVQSW Trigger: CCAGCTCTGTACTGAGACTCACGGTCTTTGTGGGAG...CCCCTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR GCA 90 bp | CCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGATCCTGTGGGGACGCTaGTCCCAAGAGCAACAGCAG | + |
Preference number: 4 (lower is better) Translates to: PLSRTVIPRPPGLLKLWEILWGR*SQEQQQ Trigger: CTGCTGTTGCTCTTGGGAGCAGCGTCCCCACAGGAT...CTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR GCA 90 bp | CCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGTTGACATCCCGGCAGTaGTGGCTGTCTGCATCCCAC | + |
Preference number: 4 (lower is better) Translates to: PLSRTVIPRPPGLLKLWELTSRQ*WLSASH Trigger: GTGGGATGCAGACAGCCAGCACTGCCGGGATGTCAA...CTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR GCA 90 bp | TTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGGGGCTAGGGCGACAGTCATaGAAAGCCTGGGTACACTCG | + |
Preference number: 4 (lower is better) Translates to: LSRTVIPRPPGLLKLWEGLGRQS*KAWVHS Trigger: CGAGTGTACCCAGGCTTTGCATGACTGTCGCCCTAG...CCCCTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR GCA 90 bp | ACACGGCCCCTGCTTCCTAGGACAGGGCTTTGGGAGCAGAGGCAGGGCAGCTCCACAATGGATGAAGGCTaGTCTCGACAAAGGGGATTG | + |
Preference number: 4 (lower is better) Translates to: TRPLLPRTGLWEQRQGSSTMDEG*SRQRGL Trigger: CAATCCCCTTTGTCGAGAGCAGCCTTCATCCATTGT...GGAGCTGCCCTGCCTCTGCTCCCAAAGCCCTGTCCTAGGAAGCAGGGGCCGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164388.2 |
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CDS-3UTR CCA 90 bp | CCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGACATCCCGGCAGTGCTaGCTGTCTGCATCCCACTCA | + |
Preference number: 4 (lower is better) Translates to: PLSRTVIPRPPGLLKLWETSRQC*LSASHS Trigger: TGAGTGGGATGCAGACAGCCAGCACTGCCGGGATGT...CTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CCA 90 bp | GATGCTGGCAATAGCGGTAACGACACTCATCTATGTCCACACATTCGGGTCCAAGCCAGTCACCTGGGCTaGCCCCCGGCAGTGCTGGCT | + |
Preference number: 4 (lower is better) Translates to: DAGNSGNDTHLCPHIRVQASHLG*PPAVLA Trigger: AGCCAGCACTGCCGGGGGCCAGCCCAGGTGACTGGC...TTGGACCCGAATGTGTGGACATAGATGAGTGTCGTTACCGCTATTGCCAGCATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169943.8 |
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CDS-3UTR TCA 90 bp | CCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGAGGTTATGGCAGTCCTaGCTAGGGCGACAGTCATGC | + |
Preference number: 4 (lower is better) Translates to: PLSRTVIPRPPGLLKLWERLWQS*LGRQSC Trigger: GCATGACTGTCGCCCTAGTCAGGACTGCCATAACCT...CTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | CCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGAGGTCCCATAGGAGTTaGAGCAGCGCTGCTCACATG | + |
Preference number: 4 (lower is better) Translates to: PLSRTVIPRPPGLLKLWERSHRS*SSAAHM Trigger: CATGTGAGCAGCGCTGCTTCAACTCCTATGGGACCT...CTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | CCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGAACCCCCATGGAAGTTaGCACAGGTTTGGGCCTCAG | + |
Preference number: 4 (lower is better) Translates to: PLSRTVIPRPPGLLKLWENPHGS*HRFGPQ Trigger: CTGAGGCCCAAACCTGTGTCAACTTCCATGGGGGTT...CTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | CCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGGCGGTGCACAATGGATaGAGGCTGCTCTCGACAAAG | + |
Preference number: 4 (lower is better) Translates to: PLSRTVIPRPPGLLKLWEAVHNG*RLLSTK Trigger: CTTTGTCGAGAGCAGCCTTCATCCATTGTGCACCGC...CTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | CCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGCACTTCGCTCTGAGGTaGTGCTCATGTAGCGGTGCA | + |
Preference number: 4 (lower is better) Translates to: PLSRTVIPRPPGLLKLWEHFALR*CSCSGA Trigger: TGCACCGCTACATGAGCATCACCTCAGAGCGAAGTG...CTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | CCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGGAGGTTGCCTGGATCTaGAACACGTCAGCAGGCACA | + |
Preference number: 4 (lower is better) Translates to: PLSRTVIPRPPGLLKLWEEVAWI*NTSAGT Trigger: TGTGCCTGCTGACGTGTTTCAGATCCAGGCAACCTC...CTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | CCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGCTCCCACAAAGACCGTaGGTCTCAGTACAGAGCTGG | + |
Preference number: 4 (lower is better) Translates to: PLSRTVIPRPPGLLKLWELPQRP*VSVQSW Trigger: CCAGCTCTGTACTGAGACTCACGGTCTTTGTGGGAG...CTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR GCA 90 bp | CCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGGCAGTGCTGGCTGTCTaGATCCCACTCATAGCCATC | + |
Preference number: 4 (lower is better) Translates to: PLSRTVIPRPPGLLKLWEAVLAV*IPLIAI Trigger: GATGGCTATGAGTGGGATGCAGACAGCCAGCACTGC...CTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
||
CDS-3UTR CCA 90 bp | ATCATAGTTCCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCCTGAGGCTGGGAGGTaGTGGGCAGAAGTCAGGGGT | + |
Preference number: 4 (lower is better) Translates to: IIVPLSRTVIPRPPGLLKPEAGR*WAEVRG Trigger: ACCCCTGACTTCTGCCCACCACCTCCCAGCCTCAGG...CTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGGAACTATGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000070118.14 |
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CDS-3UTR CCA 90 bp | TTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGGGGCAGTCATGCAAAGCCTaGGTACACTCGTCCACATCC | + |
Preference number: 4 (lower is better) Translates to: LSRTVIPRPPGLLKLWEGQSCKA*VHSSTS Trigger: GGATGTGGACGAGTGTACCCAGGCTTTGCATGACTG...CCCCTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CCA 90 bp | TTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGGGGTCCCAACTGGAAGCCTaGCTCACACTGGCATCGAAA | + |
Preference number: 4 (lower is better) Translates to: LSRTVIPRPPGLLKLWEGSQLEA*LTLASK Trigger: TTTCGATGCCAGTGTGAGCCAGGCTTCCAGTTGGGA...CCCCTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 |
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CDS-3UTR CCA 90 bp | TTGGCTCTGAAACCTCAGCCTGACTGGAGAGGACCCCTTGTGTGGAACTCACCTGCAGCGCTGCTCACATaGGGCTCCCATGTCACACTC | + |
Preference number: 4 (lower is better) Translates to: LALKPQPDWRGPLVWNSPAALLT*GSHVTL Trigger: GAGTGTGACATGGGAGCCCCATGTGAGCAGCGCTGC...AGGTGAGTTCCACACAAGGGGTCCTCTCCAGTCAGGCTGAGGTTTCAGAGCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CCA 90 bp | GCACTGACCAGAACATGGTTCCTGGGCCCAGTATCAGCCAAGCTCTTGAGTGAGGCAGCGCTGCTCACATaGGGCTCCCATGTCACACTC | + |
Preference number: 4 (lower is better) Translates to: ALTRTWFLGPVSAKLLSEAALLT*GSHVTL Trigger: GAGTGTGACATGGGAGCCCCATGTGAGCAGCGCTGC...CTCACTCAAGAGCTTGGCTGATACTGGGCCCAGGAACCATGTTCTGGTCAGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CCA 90 bp | GCACTGACCAGAACATGGTTCCTGGGCCCAGTATCAGCCAAGCTCTTGAGTGAGCTCGACAAAGGGGATTaGAGGCAGGGCAGAGGCAGC | + |
Preference number: 4 (lower is better) Translates to: ALTRTWFLGPVSAKLLSELDKGD*RQGRGS Trigger: GCTGCCTCTGCCCTGCCTCCAATCCCCTTTGTCGAG...CTCACTCAAGAGCTTGGCTGATACTGGGCCCAGGAACCATGTTCTGGTCAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CCA 90 bp | TTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGGGGTGTAGCGGTGCACAATaGATGAAGGCTGCTCTCGAC | + |
Preference number: 4 (lower is better) Translates to: LSRTVIPRPPGLLKLWEGCSGAQ*MKAALD Trigger: GTCGAGAGCAGCCTTCATCCATTGTGCACCGCTACA...CCCCTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | TTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGGGGAACCCCCGTAGTGGTTaGTGCATTTCATCTCACCCT | + |
Preference number: 4 (lower is better) Translates to: LSRTVIPRPPGLLKLWEGNPRSG*CISSHP Trigger: AGGGTGAGATGAAATGCATCAACCACTACGGGGGTT...CCCCTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | CTGGGCCCAGTATCAGCCAAGCTCTTGAGTGAGGACCTGAGGTACATACTCTTCATCGGCCTGGCTCGTTaGCACAGCGGTACTGGCAGA | + |
Preference number: 4 (lower is better) Translates to: LGPVSAKLLSEDLRYILFIGLAR*HSGTGR Trigger: TCTGCCAGTACCGCTGTGTCAACGAGCCAGGCCGAT...GAAGAGTATGTACCTCAGGTCCTCACTCAAGAGCTTGGCTGATACTGGGCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR GCA 90 bp | TTGGCTCTGAAACCTCAGCCTGACTGGAGAGGACCCCTTGTGTGGAACTCACCTTTGACATCCCGGCAGTaGTGGCTGTCTGCATCCCAC | + |
Preference number: 4 (lower is better) Translates to: LALKPQPDWRGPLVWNSPLTSRQ*WLSASH Trigger: GTGGGATGCAGACAGCCAGCACTGCCGGGATGTCAA...AGGTGAGTTCCACACAAGGGGTCCTCTCCAGTCAGGCTGAGGTTTCAGAGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR GCA 90 bp | TTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGGGGATTTCATCTCACCCTTaGAAGCCTCCGGGATGGTCA | + |
Preference number: 4 (lower is better) Translates to: LSRTVIPRPPGLLKLWEGISSHP*KPPGWS Trigger: TGACCATCCCGGAGGCTTGCAAGGGTGAGATGAAAT...CCCCTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR GCA 90 bp | TTGGCTCTGAAACCTCAGCCTGACTGGAGAGGACCCCTTGTGTGGAACTCACCTGAGTTGAAGCAGCGCTaGTCACATGGGGCTCCCATG | + |
Preference number: 4 (lower is better) Translates to: LALKPQPDWRGPLVWNSPELKQR*SHGAPM Trigger: CATGGGAGCCCCATGTGAGCAGCGCTGCTTCAACTC...AGGTGAGTTCCACACAAGGGGTCCTCTCCAGTCAGGCTGAGGTTTCAGAGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR GCA 90 bp | TGCTCACATGGGGCTCCCATGTCACACTCATTCACATCCACACAAGAGCGGTTGGCACTCGTTGACATCTaGAGAGAGGGGCCTGCTGGG | + |
Preference number: 4 (lower is better) Translates to: CSHGAPMSHSFTSTQERLALVDI*REGPAG Trigger: CCCAGCAGGCCCCTCTCTGCAGATGTCAACGAGTGC...CAACCGCTCTTGTGTGGATGTGAATGAGTGTGACATGGGAGCCCCATGTGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169943.8 |
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CDS-3UTR CCA 90 bp | ATCATAGTTCCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGGCAGCGCTGCTCACATaGGGCTCCCATGTCACACTC | + |
Preference number: 4 (lower is better) Translates to: IIVPLSRTVIPRPPGLLKAALLT*GSHVTL Trigger: GAGTGTGACATGGGAGCCCCATGTGAGCAGCGCTGC...CTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGGAACTATGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CCA 90 bp | TTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGGGGTGGGCCTCAGAACATTaGTGTGCACCTGTTTCACAC | + |
Preference number: 4 (lower is better) Translates to: LSRTVIPRPPGLLKLWEGWASEH*CAPVSH Trigger: GTGTGAAACAGGTGCACACCAATGTTCTGAGGCCCA...CCCCTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CCA 90 bp | CTGGGCCCAGTATCAGCCAAGCTCTTGAGTGAGGACCTGAGGTACATACTCTTCCTCGACAAAGGGGATTaGAGGCAGGGCAGAGGCAGC | + |
Preference number: 4 (lower is better) Translates to: LGPVSAKLLSEDLRYILFLDKGD*RQGRGS Trigger: GCTGCCTCTGCCCTGCCTCCAATCCCCTTTGTCGAG...GAAGAGTATGTACCTCAGGTCCTCACTCAAGAGCTTGGCTGATACTGGGCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CCA 90 bp | CCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGTGTAGCGGTGCACAATaGATGAAGGCTGCTCTCGAC | + |
Preference number: 4 (lower is better) Translates to: PLSRTVIPRPPGLLKLWECSGAQ*MKAALD Trigger: GTCGAGAGCAGCCTTCATCCATTGTGCACCGCTACA...CTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | CCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGAACCCCCGTAGTGGTTaGTGCATTTCATCTCACCCT | + |
Preference number: 4 (lower is better) Translates to: PLSRTVIPRPPGLLKLWENPRSG*CISSHP Trigger: AGGGTGAGATGAAATGCATCAACCACTACGGGGGTT...CTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | TTGGCTCTGAAACCTCAGCCTGACTGGAGAGGACCCCTTGTGTGGAACTCACCTAGGTTATGGCAGTCCTaGCTAGGGCGACAGTCATGC | + |
Preference number: 4 (lower is better) Translates to: LALKPQPDWRGPLVWNSPRLWQS*LGRQSC Trigger: GCATGACTGTCGCCCTAGTCAGGACTGCCATAACCT...AGGTGAGTTCCACACAAGGGGTCCTCTCCAGTCAGGCTGAGGTTTCAGAGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | AGAACATGGTTCCTGGGCCCAGTATCAGCCAAGCTCTTGAGTGAGGACCTGAGGAGGTTATGGCAGTCCTaGCTAGGGCGACAGTCATGC | + |
Preference number: 4 (lower is better) Translates to: RTWFLGPVSAKLLSEDLRRLWQS*LGRQSC Trigger: GCATGACTGTCGCCCTAGTCAGGACTGCCATAACCT...CCTCAGGTCCTCACTCAAGAGCTTGGCTGATACTGGGCCCAGGAACCATGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | GCACTGACCAGAACATGGTTCCTGGGCCCAGTATCAGCCAAGCTCTTGAGTGAGAGGTCCCATAGGAGTTaGAGCAGCGCTGCTCACATG | + |
Preference number: 4 (lower is better) Translates to: ALTRTWFLGPVSAKLLSERSHRS*SSAAHM Trigger: CATGTGAGCAGCGCTGCTTCAACTCCTATGGGACCT...CTCACTCAAGAGCTTGGCTGATACTGGGCCCAGGAACCATGTTCTGGTCAGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | TTGGCTCTGAAACCTCAGCCTGACTGGAGAGGACCCCTTGTGTGGAACTCACCTAGGTCCCATAGGAGTTaGAGCAGCGCTGCTCACATG | + |
Preference number: 4 (lower is better) Translates to: LALKPQPDWRGPLVWNSPRSHRS*SSAAHM Trigger: CATGTGAGCAGCGCTGCTTCAACTCCTATGGGACCT...AGGTGAGTTCCACACAAGGGGTCCTCTCCAGTCAGGCTGAGGTTTCAGAGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | AGAACATGGTTCCTGGGCCCAGTATCAGCCAAGCTCTTGAGTGAGGACCTGAGGAGGTCCCATAGGAGTTaGAGCAGCGCTGCTCACATG | + |
Preference number: 4 (lower is better) Translates to: RTWFLGPVSAKLLSEDLRRSHRS*SSAAHM Trigger: CATGTGAGCAGCGCTGCTTCAACTCCTATGGGACCT...CCTCAGGTCCTCACTCAAGAGCTTGGCTGATACTGGGCCCAGGAACCATGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | GCACTGACCAGAACATGGTTCCTGGGCCCAGTATCAGCCAAGCTCTTGAGTGAGGCGGTGCACAATGGATaGAGGCTGCTCTCGACAAAG | + |
Preference number: 4 (lower is better) Translates to: ALTRTWFLGPVSAKLLSEAVHNG*RLLSTK Trigger: CTTTGTCGAGAGCAGCCTTCATCCATTGTGCACCGC...CTCACTCAAGAGCTTGGCTGATACTGGGCCCAGGAACCATGTTCTGGTCAGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR GCA 90 bp | ATCATAGTTCCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGATCCTGTGGGGACGCTaGTCCCAAGAGCAACAGCAG | + |
Preference number: 4 (lower is better) Translates to: IIVPLSRTVIPRPPGLLKILWGR*SQEQQQ Trigger: CTGCTGTTGCTCTTGGGAGCAGCGTCCCCACAGGAT...CTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGGAACTATGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR GCA 90 bp | CTGGGCCCAGTATCAGCCAAGCTCTTGAGTGAGGACCTGAGGTACATACTCTTCTTGACATCCCGGCAGTaGTGGCTGTCTGCATCCCAC | + |
Preference number: 4 (lower is better) Translates to: LGPVSAKLLSEDLRYILFLTSRQ*WLSASH Trigger: GTGGGATGCAGACAGCCAGCACTGCCGGGATGTCAA...GAAGAGTATGTACCTCAGGTCCTCACTCAAGAGCTTGGCTGATACTGGGCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR GCA 90 bp | AGAACATGGTTCCTGGGCCCAGTATCAGCCAAGCTCTTGAGTGAGGACCTGAGGCTAGGGCGACAGTCATaGAAAGCCTGGGTACACTCG | + |
Preference number: 4 (lower is better) Translates to: RTWFLGPVSAKLLSEDLRLGRQS*KAWVHS Trigger: CGAGTGTACCCAGGCTTTGCATGACTGTCGCCCTAG...CCTCAGGTCCTCACTCAAGAGCTTGGCTGATACTGGGCCCAGGAACCATGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR GCA 90 bp | ATCATAGTTCCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGGAGTTGAAGCAGCGCTaGTCACATGGGGCTCCCATG | + |
Preference number: 4 (lower is better) Translates to: IIVPLSRTVIPRPPGLLKELKQR*SHGAPM Trigger: CATGGGAGCCCCATGTGAGCAGCGCTGCTTCAACTC...CTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGGAACTATGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR GCA 90 bp | TTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGGGGACAATGGATGAAGGCTaGTCTCGACAAAGGGGATTG | + |
Preference number: 4 (lower is better) Translates to: LSRTVIPRPPGLLKLWEGTMDEG*SRQRGL Trigger: CAATCCCCTTTGTCGAGAGCAGCCTTCATCCATTGT...CCCCTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CCA 90 bp | CTGGGCCCAGTATCAGCCAAGCTCTTGAGTGAGGACCTGAGGTACATACTCTTCACATCCCGGCAGTGCTaGCTGTCTGCATCCCACTCA | + |
Preference number: 4 (lower is better) Translates to: LGPVSAKLLSEDLRYILFTSRQC*LSASHS Trigger: TGAGTGGGATGCAGACAGCCAGCACTGCCGGGATGT...GAAGAGTATGTACCTCAGGTCCTCACTCAAGAGCTTGGCTGATACTGGGCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CCA 90 bp | ATCATAGTTCCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGACATCCCGGCAGTGCTaGCTGTCTGCATCCCACTCA | + |
Preference number: 4 (lower is better) Translates to: IIVPLSRTVIPRPPGLLKTSRQC*LSASHS Trigger: TGAGTGGGATGCAGACAGCCAGCACTGCCGGGATGT...CTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGGAACTATGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CCA 90 bp | AAACTCCTAGCACTGACCAGAACATGGTTCCTGGGCCCAGTATCAGCCAAGCTCACATCCCGGCAGTGCTaGCTGTCTGCATCCCACTCA | + |
Preference number: 4 (lower is better) Translates to: KLLALTRTWFLGPVSAKLTSRQC*LSASHS Trigger: TGAGTGGGATGCAGACAGCCAGCACTGCCGGGATGT...GAGCTTGGCTGATACTGGGCCCAGGAACCATGTTCTGGTCAGTGCTAGGAGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | ATCATAGTTCCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGAGGTTATGGCAGTCCTaGCTAGGGCGACAGTCATGC | + |
Preference number: 4 (lower is better) Translates to: IIVPLSRTVIPRPPGLLKRLWQS*LGRQSC Trigger: GCATGACTGTCGCCCTAGTCAGGACTGCCATAACCT...CTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGGAACTATGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | ATCATAGTTCCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGAGGTCCCATAGGAGTTaGAGCAGCGCTGCTCACATG | + |
Preference number: 4 (lower is better) Translates to: IIVPLSRTVIPRPPGLLKRSHRS*SSAAHM Trigger: CATGTGAGCAGCGCTGCTTCAACTCCTATGGGACCT...CTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGGAACTATGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | AAACTCCTAGCACTGACCAGAACATGGTTCCTGGGCCCAGTATCAGCCAAGCTCAACCCCCATGGAAGTTaGCACAGGTTTGGGCCTCAG | + |
Preference number: 4 (lower is better) Translates to: KLLALTRTWFLGPVSAKLNPHGS*HRFGPQ Trigger: CTGAGGCCCAAACCTGTGTCAACTTCCATGGGGGTT...GAGCTTGGCTGATACTGGGCCCAGGAACCATGTTCTGGTCAGTGCTAGGAGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | ATCATAGTTCCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGGCGGTGCACAATGGATaGAGGCTGCTCTCGACAAAG | + |
Preference number: 4 (lower is better) Translates to: IIVPLSRTVIPRPPGLLKAVHNG*RLLSTK Trigger: CTTTGTCGAGAGCAGCCTTCATCCATTGTGCACCGC...CTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGGAACTATGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | CTGGGCCCAGTATCAGCCAAGCTCTTGAGTGAGGACCTGAGGTACATACTCTTCGCGGTGCACAATGGATaGAGGCTGCTCTCGACAAAG | + |
Preference number: 4 (lower is better) Translates to: LGPVSAKLLSEDLRYILFAVHNG*RLLSTK Trigger: CTTTGTCGAGAGCAGCCTTCATCCATTGTGCACCGC...GAAGAGTATGTACCTCAGGTCCTCACTCAAGAGCTTGGCTGATACTGGGCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | ATCATAGTTCCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCACTTCGCTCTGAGGTaGTGCTCATGTAGCGGTGCA | + |
Preference number: 4 (lower is better) Translates to: IIVPLSRTVIPRPPGLLKHFALR*CSCSGA Trigger: TGCACCGCTACATGAGCATCACCTCAGAGCGAAGTG...CTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGGAACTATGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | AAACTCCTAGCACTGACCAGAACATGGTTCCTGGGCCCAGTATCAGCCAAGCTCCACTTCGCTCTGAGGTaGTGCTCATGTAGCGGTGCA | + |
Preference number: 4 (lower is better) Translates to: KLLALTRTWFLGPVSAKLHFALR*CSCSGA Trigger: TGCACCGCTACATGAGCATCACCTCAGAGCGAAGTG...GAGCTTGGCTGATACTGGGCCCAGGAACCATGTTCTGGTCAGTGCTAGGAGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | CTGGGCCCAGTATCAGCCAAGCTCTTGAGTGAGGACCTGAGGTACATACTCTTCCACTTCGCTCTGAGGTaGTGCTCATGTAGCGGTGCA | + |
Preference number: 4 (lower is better) Translates to: LGPVSAKLLSEDLRYILFHFALR*CSCSGA Trigger: TGCACCGCTACATGAGCATCACCTCAGAGCGAAGTG...GAAGAGTATGTACCTCAGGTCCTCACTCAAGAGCTTGGCTGATACTGGGCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | CTGGGCCCAGTATCAGCCAAGCTCTTGAGTGAGGACCTGAGGTACATACTCTTCGAGGTTGCCTGGATCTaGAACACGTCAGCAGGCACA | + |
Preference number: 4 (lower is better) Translates to: LGPVSAKLLSEDLRYILFEVAWI*NTSAGT Trigger: TGTGCCTGCTGACGTGTTTCAGATCCAGGCAACCTC...GAAGAGTATGTACCTCAGGTCCTCACTCAAGAGCTTGGCTGATACTGGGCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | ATCATAGTTCCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTCCCACAAAGACCGTaGGTCTCAGTACAGAGCTGG | + |
Preference number: 4 (lower is better) Translates to: IIVPLSRTVIPRPPGLLKLPQRP*VSVQSW Trigger: CCAGCTCTGTACTGAGACTCACGGTCTTTGTGGGAG...CTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGGAACTATGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR GCA 90 bp | ATCATAGTTCCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTAGGGCGACAGTCATaGAAAGCCTGGGTACACTCG | + |
Preference number: 4 (lower is better) Translates to: IIVPLSRTVIPRPPGLLKLGRQS*KAWVHS Trigger: CGAGTGTACCCAGGCTTTGCATGACTGTCGCCCTAG...CTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGGAACTATGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR GCA 90 bp | CTGGGCCCAGTATCAGCCAAGCTCTTGAGTGAGGACCTGAGGTACATACTCTTCCTAGGGCGACAGTCATaGAAAGCCTGGGTACACTCG | + |
Preference number: 4 (lower is better) Translates to: LGPVSAKLLSEDLRYILFLGRQS*KAWVHS Trigger: CGAGTGTACCCAGGCTTTGCATGACTGTCGCCCTAG...GAAGAGTATGTACCTCAGGTCCTCACTCAAGAGCTTGGCTGATACTGGGCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR GCA 90 bp | CCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGACAATGGATGAAGGCTaGTCTCGACAAAGGGGATTG | + |
Preference number: 4 (lower is better) Translates to: PLSRTVIPRPPGLLKLWETMDEG*SRQRGL Trigger: CAATCCCCTTTGTCGAGAGCAGCCTTCATCCATTGT...CTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CCA 90 bp | GCACTGACCAGAACATGGTTCCTGGGCCCAGTATCAGCCAAGCTCTTGAGTGAGCAGTCATGCAAAGCCTaGGTACACTCGTCCACATCC | + |
Preference number: 4 (lower is better) Translates to: ALTRTWFLGPVSAKLLSEQSCKA*VHSSTS Trigger: GGATGTGGACGAGTGTACCCAGGCTTTGCATGACTG...CTCACTCAAGAGCTTGGCTGATACTGGGCCCAGGAACCATGTTCTGGTCAGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CCA 90 bp | TTGGCTCTGAAACCTCAGCCTGACTGGAGAGGACCCCTTGTGTGGAACTCACCTTGTAGCGGTGCACAATaGATGAAGGCTGCTCTCGAC | + |
Preference number: 4 (lower is better) Translates to: LALKPQPDWRGPLVWNSPCSGAQ*MKAALD Trigger: GTCGAGAGCAGCCTTCATCCATTGTGCACCGCTACA...AGGTGAGTTCCACACAAGGGGTCCTCTCCAGTCAGGCTGAGGTTTCAGAGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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3UTR CAA 72 bp | CCCATGTCACACTCATTCACATCCACACAAGAGCGGTaGTTAGGTCCCAACTGGAAGCCTGGCTCACACTGG | + |
Preference number: 4 (lower is better) Translates to: PMSHSFTSTQER*LGPNWKPGSHW Trigger: CCAGTGTGAGCCAGGCTTCCAGTTGGGACCTAACAACCGCTCTTGTGTGGATGTGAATGAGTGTGACATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169943.8 |
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CDS-3UTR TCA 90 bp | GCACTGACCAGAACATGGTTCCTGGGCCCAGTATCAGCCAAGCTCTTGAGTGAGAACCCCCGTAGTGGTTaGTGCATTTCATCTCACCCT | + |
Preference number: 4 (lower is better) Translates to: ALTRTWFLGPVSAKLLSENPRSG*CISSHP Trigger: AGGGTGAGATGAAATGCATCAACCACTACGGGGGTT...CTCACTCAAGAGCTTGGCTGATACTGGGCCCAGGAACCATGTTCTGGTCAGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR GCA 90 bp | GATGCTGGCAATAGCGGTAACGACACTCATCTATGTCCACACATTCGGGTCCAAATCCTGTGGGGACGCTaGTCCCAAGAGCAACAGCAG | + |
Preference number: 4 (lower is better) Translates to: DAGNSGNDTHLCPHIRVQILWGR*SQEQQQ Trigger: CTGCTGTTGCTCTTGGGAGCAGCGTCCCCACAGGAT...TTGGACCCGAATGTGTGGACATAGATGAGTGTCGTTACCGCTATTGCCAGCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169943.8 |
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CDS-3UTR GCA 90 bp | AGAACATGGTTCCTGGGCCCAGTATCAGCCAAGCTCTTGAGTGAGGACCTGAGGATTTCATCTCACCCTTaGAAGCCTCCGGGATGGTCA | + |
Preference number: 4 (lower is better) Translates to: RTWFLGPVSAKLLSEDLRISSHP*KPPGWS Trigger: TGACCATCCCGGAGGCTTGCAAGGGTGAGATGAAAT...CCTCAGGTCCTCACTCAAGAGCTTGGCTGATACTGGGCCCAGGAACCATGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CCA 90 bp | CTGGGCCCAGTATCAGCCAAGCTCTTGAGTGAGGACCTGAGGTACATACTCTTCCAGTCATGCAAAGCCTaGGTACACTCGTCCACATCC | + |
Preference number: 4 (lower is better) Translates to: LGPVSAKLLSEDLRYILFQSCKA*VHSSTS Trigger: GGATGTGGACGAGTGTACCCAGGCTTTGCATGACTG...GAAGAGTATGTACCTCAGGTCCTCACTCAAGAGCTTGGCTGATACTGGGCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CCA 90 bp | ATCATAGTTCCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGTCCCAACTGGAAGCCTaGCTCACACTGGCATCGAAA | + |
Preference number: 4 (lower is better) Translates to: IIVPLSRTVIPRPPGLLKSQLEA*LTLASK Trigger: TTTCGATGCCAGTGTGAGCCAGGCTTCCAGTTGGGA...CTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGGAACTATGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 |
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CDS-3UTR CCA 90 bp | GCACTGACCAGAACATGGTTCCTGGGCCCAGTATCAGCCAAGCTCTTGAGTGAGTGGGCCTCAGAACATTaGTGTGCACCTGTTTCACAC | + |
Preference number: 4 (lower is better) Translates to: ALTRTWFLGPVSAKLLSEWASEH*CAPVSH Trigger: GTGTGAAACAGGTGCACACCAATGTTCTGAGGCCCA...CTCACTCAAGAGCTTGGCTGATACTGGGCCCAGGAACCATGTTCTGGTCAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CCA 90 bp | CGTCACTGGCCTGGCGAGGACCAGCATGGCGCTGACATTGTTGATTTGCCTAATTGGGCCTCAGAACATTaGTGTGCACCTGTTTCACAC | + |
Preference number: 4 (lower is better) Translates to: RHWPGEDQHGADIVDLPNWASEH*CAPVSH Trigger: GTGTGAAACAGGTGCACACCAATGTTCTGAGGCCCA...ATTAGGCAAATCAACAATGTCAGCGCCATGCTGGTCCTCGCCAGGCCAGTGACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168330.2 |
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CDS-3UTR CCA 90 bp | AGAACATGGTTCCTGGGCCCAGTATCAGCCAAGCTCTTGAGTGAGGACCTGAGGTGGGCCTCAGAACATTaGTGTGCACCTGTTTCACAC | + |
Preference number: 4 (lower is better) Translates to: RTWFLGPVSAKLLSEDLRWASEH*CAPVSH Trigger: GTGTGAAACAGGTGCACACCAATGTTCTGAGGCCCA...CCTCAGGTCCTCACTCAAGAGCTTGGCTGATACTGGGCCCAGGAACCATGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CCA 90 bp | ATCATAGTTCCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGTGTAGCGGTGCACAATaGATGAAGGCTGCTCTCGAC | + |
Preference number: 4 (lower is better) Translates to: IIVPLSRTVIPRPPGLLKCSGAQ*MKAALD Trigger: GTCGAGAGCAGCCTTCATCCATTGTGCACCGCTACA...CTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGGAACTATGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | ATCATAGTTCCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGAACCCCCGTAGTGGTTaGTGCATTTCATCTCACCCT | + |
Preference number: 4 (lower is better) Translates to: IIVPLSRTVIPRPPGLLKNPRSG*CISSHP Trigger: AGGGTGAGATGAAATGCATCAACCACTACGGGGGTT...CTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGGAACTATGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | TGTTTCCAGAACGGATCTGAAAGGCATTGTAGGCACCAGGGTAGACAGAGGTTGCACTTCGCTCTGAGGTaGTGCTCATGTAGCGGTGCA | + |
Preference number: 4 (lower is better) Translates to: CFQNGSERHCRHQGRQRLHFALR*CSCSGA Trigger: TGCACCGCTACATGAGCATCACCTCAGAGCGAAGTG...CAACCTCTGTCTACCCTGGTGCCTACAATGCCTTTCAGATCCGTTCTGGAAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168330.2 |
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CDS-3UTR GCA 90 bp | ATCATAGTTCCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGATTTCATCTCACCCTTaGAAGCCTCCGGGATGGTCA | + |
Preference number: 4 (lower is better) Translates to: IIVPLSRTVIPRPPGLLKISSHP*KPPGWS Trigger: TGACCATCCCGGAGGCTTGCAAGGGTGAGATGAAAT...CTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGGAACTATGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR GCA 90 bp | TTGGCTCTGAAACCTCAGCCTGACTGGAGAGGACCCCTTGTGTGGAACTCACCTACAATGGATGAAGGCTaGTCTCGACAAAGGGGATTG | + |
Preference number: 4 (lower is better) Translates to: LALKPQPDWRGPLVWNSPTMDEG*SRQRGL Trigger: CAATCCCCTTTGTCGAGAGCAGCCTTCATCCATTGT...AGGTGAGTTCCACACAAGGGGTCCTCTCCAGTCAGGCTGAGGTTTCAGAGCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CCA 90 bp | ATCATAGTTCCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGTGGGCCTCAGAACATTaGTGTGCACCTGTTTCACAC | + |
Preference number: 4 (lower is better) Translates to: IIVPLSRTVIPRPPGLLKWASEH*CAPVSH Trigger: GTGTGAAACAGGTGCACACCAATGTTCTGAGGCCCA...CTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGGAACTATGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR GCA 90 bp | CTGGGCCCAGTATCAGCCAAGCTCTTGAGTGAGGACCTGAGGTACATACTCTTCACAATGGATGAAGGCTaGTCTCGACAAAGGGGATTG | + |
Preference number: 4 (lower is better) Translates to: LGPVSAKLLSEDLRYILFTMDEG*SRQRGL Trigger: CAATCCCCTTTGTCGAGAGCAGCCTTCATCCATTGT...GAAGAGTATGTACCTCAGGTCCTCACTCAAGAGCTTGGCTGATACTGGGCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | CAGCCAGGACTCCTTCTTTCTCCCTTTATTGTCCTTCACATCATAGTTCCTTTAATCGGCCTGGCTCGTTaGCACAGCGGTACTGGCAGA | + |
Preference number: 4 (lower is better) Translates to: QPGLLLSPFIVLHIIVPLIGLAR*HSGTGR Trigger: TCTGCCAGTACCGCTGTGTCAACGAGCCAGGCCGAT...TAAAGGAACTATGATGTGAAGGACAATAAAGGGAGAAAGAAGGAGTCCTGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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3UTR CAA 72 bp | AGAACATGGTTCCTGGGCCCAGTATCAGCCAAGCTCTaGAGTGAGGACCTGAGGTACATACTCTTCAGAACT | + |
Preference number: 4 (lower is better) Translates to: RTWFLGPVSAKL*SEDLRYILFRT Trigger: AGTTCTGAAGAGTATGTACCTCAGGTCCTCACTCAAGAGCTTGGCTGATACTGGGCCCAGGAACCATGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | ACCCTAAATATGGATGGCTGGATAATAGATAAACACTCCTTAGGGGCTGGGAATAGGTTATGGCAGTCCTaGCTAGGGCGACAGTCATGC | + |
Preference number: 4 (lower is better) Translates to: TLNMDGWIIDKHSLGAGNRLWQS*LGRQSC Trigger: GCATGACTGTCGCCCTAGTCAGGACTGCCATAACCT...ATTCCCAGCCCCTAAGGAGTGTTTATCTATTATCCAGCCATCCATATTTAGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | ACCCTAAATATGGATGGCTGGATAATAGATAAACACTCCTTAGGGGCTGGGAATAACCCCCATGGAAGTTaGCACAGGTTTGGGCCTCAG | + |
Preference number: 4 (lower is better) Translates to: TLNMDGWIIDKHSLGAGNNPHGS*HRFGPQ Trigger: CTGAGGCCCAAACCTGTGTCAACTTCCATGGGGGTT...ATTCCCAGCCCCTAAGGAGTGTTTATCTATTATCCAGCCATCCATATTTAGGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | CAGCCAGGACTCCTTCTTTCTCCCTTTATTGTCCTTCACATCATAGTTCCTTTAGCGGTGCACAATGGATaGAGGCTGCTCTCGACAAAG | + |
Preference number: 4 (lower is better) Translates to: QPGLLLSPFIVLHIIVPLAVHNG*RLLSTK Trigger: CTTTGTCGAGAGCAGCCTTCATCCATTGTGCACCGC...TAAAGGAACTATGATGTGAAGGACAATAAAGGGAGAAAGAAGGAGTCCTGGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | ACCCTAAATATGGATGGCTGGATAATAGATAAACACTCCTTAGGGGCTGGGAATCACTTCGCTCTGAGGTaGTGCTCATGTAGCGGTGCA | + |
Preference number: 4 (lower is better) Translates to: TLNMDGWIIDKHSLGAGNHFALR*CSCSGA Trigger: TGCACCGCTACATGAGCATCACCTCAGAGCGAAGTG...ATTCCCAGCCCCTAAGGAGTGTTTATCTATTATCCAGCCATCCATATTTAGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | CAGCCAGGACTCCTTCTTTCTCCCTTTATTGTCCTTCACATCATAGTTCCTTTAGAGGTTGCCTGGATCTaGAACACGTCAGCAGGCACA | + |
Preference number: 4 (lower is better) Translates to: QPGLLLSPFIVLHIIVPLEVAWI*NTSAGT Trigger: TGTGCCTGCTGACGTGTTTCAGATCCAGGCAACCTC...TAAAGGAACTATGATGTGAAGGACAATAAAGGGAGAAAGAAGGAGTCCTGGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | ACCCTAAATATGGATGGCTGGATAATAGATAAACACTCCTTAGGGGCTGGGAATGAGGTTGCCTGGATCTaGAACACGTCAGCAGGCACA | + |
Preference number: 4 (lower is better) Translates to: TLNMDGWIIDKHSLGAGNEVAWI*NTSAGT Trigger: TGTGCCTGCTGACGTGTTTCAGATCCAGGCAACCTC...ATTCCCAGCCCCTAAGGAGTGTTTATCTATTATCCAGCCATCCATATTTAGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR TCA 90 bp | ACCCTAAATATGGATGGCTGGATAATAGATAAACACTCCTTAGGGGCTGGGAATCTCCCACAAAGACCGTaGGTCTCAGTACAGAGCTGG | + |
Preference number: 4 (lower is better) Translates to: TLNMDGWIIDKHSLGAGNLPQRP*VSVQSW Trigger: CCAGCTCTGTACTGAGACTCACGGTCTTTGTGGGAG...ATTCCCAGCCCCTAAGGAGTGTTTATCTATTATCCAGCCATCCATATTTAGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CCA 90 bp | CAGCCAGGACTCCTTCTTTCTCCCTTTATTGTCCTTCACATCATAGTTCCTTTACAGTCATGCAAAGCCTaGGTACACTCGTCCACATCC | + |
Preference number: 4 (lower is better) Translates to: QPGLLLSPFIVLHIIVPLQSCKA*VHSSTS Trigger: GGATGTGGACGAGTGTACCCAGGCTTTGCATGACTG...TAAAGGAACTATGATGTGAAGGACAATAAAGGGAGAAAGAAGGAGTCCTGGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CCA 90 bp | ACCCTAAATATGGATGGCTGGATAATAGATAAACACTCCTTAGGGGCTGGGAATTCCCAACTGGAAGCCTaGCTCACACTGGCATCGAAA | + |
Preference number: 4 (lower is better) Translates to: TLNMDGWIIDKHSLGAGNSQLEA*LTLASK Trigger: TTTCGATGCCAGTGTGAGCCAGGCTTCCAGTTGGGA...ATTCCCAGCCCCTAAGGAGTGTTTATCTATTATCCAGCCATCCATATTTAGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 |
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CDS-3UTR GCA 90 bp | CAGCCAGGACTCCTTCTTTCTCCCTTTATTGTCCTTCACATCATAGTTCCTTTAATTTCATCTCACCCTTaGAAGCCTCCGGGATGGTCA | + |
Preference number: 4 (lower is better) Translates to: QPGLLLSPFIVLHIIVPLISSHP*KPPGWS Trigger: TGACCATCCCGGAGGCTTGCAAGGGTGAGATGAAAT...TAAAGGAACTATGATGTGAAGGACAATAAAGGGAGAAAGAAGGAGTCCTGGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CCA 90 bp | ACCCTAAATATGGATGGCTGGATAATAGATAAACACTCCTTAGGGGCTGGGAATTGGGCCTCAGAACATTaGTGTGCACCTGTTTCACAC | + |
Preference number: 4 (lower is better) Translates to: TLNMDGWIIDKHSLGAGNWASEH*CAPVSH Trigger: GTGTGAAACAGGTGCACACCAATGTTCTGAGGCCCA...ATTCCCAGCCCCTAAGGAGTGTTTATCTATTATCCAGCCATCCATATTTAGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CAA 90 bp | ACACGGCCCCTGCTTCCTAGGACAGGGCTTTGGGAGCAGAGGCAGGGCAGCTCCAATCGGCCTGGCTCGTaGACACAGCGGTACTGGCAG | + |
Preference number: 5 (lower is better) Translates to: TRPLLPRTGLWEQRQGSSNRPGS*TQRYWQ Trigger: CTGCCAGTACCGCTGTGTCAACGAGCCAGGCCGATT...GGAGCTGCCCTGCCTCTGCTCCCAAAGCCCTGTCCTAGGAAGCAGGGGCCGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164388.2 |
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CDS-3UTR CAA 90 bp | ACACGGCCCCTGCTTCCTAGGACAGGGCTTTGGGAGCAGAGGCAGGGCAGCTCCTCTCGACAAAGGGGATaGGAGGCAGGGCAGAGGCAG | + |
Preference number: 5 (lower is better) Translates to: TRPLLPRTGLWEQRQGSSSRQRG*EAGQRQ Trigger: CTGCCTCTGCCCTGCCTCCAATCCCCTTTGTCGAGA...GGAGCTGCCCTGCCTCTGCTCCCAAAGCCCTGTCCTAGGAAGCAGGGGCCGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164388.2 |
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CDS-3UTR CAA 90 bp | TTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGGGGGCAAGGGTTTGGTTGTaGAGCATGGGCCGCTGGCGG | + |
Preference number: 5 (lower is better) Translates to: LSRTVIPRPPGLLKLWEGARVWL*SMGRWR Trigger: CCGCCAGCGGCCCATGCTCAACAACCAAACCCTTGC...CCCCTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CAA 90 bp | TTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGGGGATGGTCAGGCACTCGTaGACATCCCGGCAGTGCTGG | + |
Preference number: 5 (lower is better) Translates to: LSRTVIPRPPGLLKLWEGMVRHS*TSRQCW Trigger: CCAGCACTGCCGGGATGTCAACGAGTGCCTGACCAT...CCCCTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CAA 90 bp | CCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGGCAAGGGTTTGGTTGTaGAGCATGGGCCGCTGGCGG | + |
Preference number: 5 (lower is better) Translates to: PLSRTVIPRPPGLLKLWEARVWL*SMGRWR Trigger: CCGCCAGCGGCCCATGCTCAACAACCAAACCCTTGC...CTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CAA 90 bp | TTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGGGGAATCGGCCTGGCTCGTaGACACAGCGGTACTGGCAG | + |
Preference number: 5 (lower is better) Translates to: LSRTVIPRPPGLLKLWEGNRPGS*TQRYWQ Trigger: CTGCCAGTACCGCTGTGTCAACGAGCCAGGCCGATT...CCCCTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CAA 90 bp | TTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGGGGTCTCGACAAAGGGGATaGGAGGCAGGGCAGAGGCAG | + |
Preference number: 5 (lower is better) Translates to: LSRTVIPRPPGLLKLWEGSRQRG*EAGQRQ Trigger: CTGCCTCTGCCCTGCCTCCAATCCCCTTTGTCGAGA...CCCCTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CAA 90 bp | ACACGGCCCCTGCTTCCTAGGACAGGGCTTTGGGAGCAGAGGCAGGGCAGCTCCCAGGGTAGACAGAGGTaGCCTGGATCTGAAACACGT | + |
Preference number: 5 (lower is better) Translates to: TRPLLPRTGLWEQRQGSSQGRQR*PGSETR Trigger: ACGTGTTTCAGATCCAGGCAACCTCTGTCTACCCTG...GGAGCTGCCCTGCCTCTGCTCCCAAAGCCCTGTCCTAGGAAGCAGGGGCCGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164388.2 |
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CDS-3UTR CAA 90 bp | CCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGATGGTCAGGCACTCGTaGACATCCCGGCAGTGCTGG | + |
Preference number: 5 (lower is better) Translates to: PLSRTVIPRPPGLLKLWEMVRHS*TSRQCW Trigger: CCAGCACTGCCGGGATGTCAACGAGTGCCTGACCAT...CTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CAA 90 bp | CCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGAATCGGCCTGGCTCGTaGACACAGCGGTACTGGCAG | + |
Preference number: 5 (lower is better) Translates to: PLSRTVIPRPPGLLKLWENRPGS*TQRYWQ Trigger: CTGCCAGTACCGCTGTGTCAACGAGCCAGGCCGATT...CTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CAA 90 bp | CCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGTCTCGACAAAGGGGATaGGAGGCAGGGCAGAGGCAG | + |
Preference number: 5 (lower is better) Translates to: PLSRTVIPRPPGLLKLWESRQRG*EAGQRQ Trigger: CTGCCTCTGCCCTGCCTCCAATCCCCTTTGTCGAGA...CTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CAA 90 bp | GCACTGACCAGAACATGGTTCCTGGGCCCAGTATCAGCCAAGCTCTTGAGTGAGGCAAGGGTTTGGTTGTaGAGCATGGGCCGCTGGCGG | + |
Preference number: 5 (lower is better) Translates to: ALTRTWFLGPVSAKLLSEARVWL*SMGRWR Trigger: CCGCCAGCGGCCCATGCTCAACAACCAAACCCTTGC...CTCACTCAAGAGCTTGGCTGATACTGGGCCCAGGAACCATGTTCTGGTCAGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS TCA 90 bp | CTCTCGACAAAGGGGATTGGAGGCAGGGCAGAGGCAGCGGTTGTCTaGCACTTGGACATAGGGCTCCACACAACGGTTGGTGTCCACACA | + |
Preference number: 5 (lower is better) Translates to: LSTKGIGGRAEAAVV*HLDIGLHTTVGVHT Trigger: TGTGTGGACACCAACCGTTGTGTGGAGCCCTATGTCCAAGTGTCAGACAACCGCTGCCTCTGCCCTGCCTCCAATCCCCTTTGTCGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000070118.14 ENSMUST00000164388.2 ENSMUST00000165485.8 ENSMUST00000166253.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS GCA 90 bp | GGTACTGGCAGAGGTAACTGGAGTAGCCGCACTCATCGATATCGCTaGAGGAGAAGCCATCCCGGTGCAGCTCATAGCCCTGGTTACAGC | + |
Preference number: 5 (lower is better) Translates to: GTGRGNWSSRTHRYR*RRSHPGAAHSPGYS Trigger: GCTGTAACCAGGGCTATGAGCTGCACCGGGATGGCTTCTCCTGCAGCGATATCGATGAGTGCGGCTACTCCAGTTACCTCTGCCAGTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166253.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000167827.2 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CAA 90 bp | ATCATAGTTCCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGGCAAGGGTTTGGTTGTaGAGCATGGGCCGCTGGCGG | + |
Preference number: 5 (lower is better) Translates to: IIVPLSRTVIPRPPGLLKARVWL*SMGRWR Trigger: CCGCCAGCGGCCCATGCTCAACAACCAAACCCTTGC...CTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGGAACTATGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CAA 90 bp | GCACTGACCAGAACATGGTTCCTGGGCCCAGTATCAGCCAAGCTCTTGAGTGAGTCTCGACAAAGGGGATaGGAGGCAGGGCAGAGGCAG | + |
Preference number: 5 (lower is better) Translates to: ALTRTWFLGPVSAKLLSESRQRG*EAGQRQ Trigger: CTGCCTCTGCCCTGCCTCCAATCCCCTTTGTCGAGA...CTCACTCAAGAGCTTGGCTGATACTGGGCCCAGGAACCATGTTCTGGTCAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CAA 90 bp | TTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGGGGCAGGGTAGACAGAGGTaGCCTGGATCTGAAACACGT | + |
Preference number: 5 (lower is better) Translates to: LSRTVIPRPPGLLKLWEGQGRQR*PGSETR Trigger: ACGTGTTTCAGATCCAGGCAACCTCTGTCTACCCTG...CCCCTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CAA 90 bp | TTGTTGAGCATGGGCCGCTGGCGGTGGAGGTCCTTCACCATGGAGATCACTGATATGGTCAGGCACTCGTaGACATCTGCAGAGAGGGGC | + |
Preference number: 5 (lower is better) Translates to: LLSMGRWRWRSFTMEITDMVRHS*TSAERG Trigger: GCCCCTCTCTGCAGATGTCAACGAGTGCCTGACCAT...ATCAGTGATCTCCATGGTGAAGGACCTCCACCGCCAGCGGCCCATGCTCAACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169943.8 |
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CDS CCA 90 bp | GTCAATATCTTGGCAGAGCCTTGTAGCCAGCAGCTGGTAGCCTTGTaGGCAGTGACAGGAGAATCGGCCTGGCTCGTTGACACAGCGGTA | + |
Preference number: 5 (lower is better) Translates to: VNILAEPCSQQLVAL*AVTGESAWLVDTAV Trigger: TACCGCTGTGTCAACGAGCCAGGCCGATTCTCCTGTCACTGCCCACAAGGCTACCAGCTGCTGGCTACAAGGCTCTGCCAAGATATTGAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000070118.14 ENSMUST00000164388.2 ENSMUST00000165485.8 ENSMUST00000166253.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS CCA 90 bp | GCGACACAGGAAGGTCCCATAGGAGTTGAAGCAGCGCTGCTCACATaGGGCTCCCATGTCACACTCATTCACATCCACACATTCGGGTCC | + |
Preference number: 5 (lower is better) Translates to: ATQEGPIGVEAALLT*GSHVTLIHIHTFGS Trigger: GGACCCGAATGTGTGGATGTGAATGAGTGTGACATGGGAGCCCCATGTGAGCAGCGCTGCTTCAACTCCTATGGGACCTTCCTGTGTCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236518.2 |
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CDS-3UTR CAA 90 bp | ATCATAGTTCCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGATGGTCAGGCACTCGTaGACATCCCGGCAGTGCTGG | + |
Preference number: 5 (lower is better) Translates to: IIVPLSRTVIPRPPGLLKMVRHS*TSRQCW Trigger: CCAGCACTGCCGGGATGTCAACGAGTGCCTGACCAT...CTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGGAACTATGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CAA 90 bp | CTGGGCCCAGTATCAGCCAAGCTCTTGAGTGAGGACCTGAGGTACATACTCTTCATGGTCAGGCACTCGTaGACATCCCGGCAGTGCTGG | + |
Preference number: 5 (lower is better) Translates to: LGPVSAKLLSEDLRYILFMVRHS*TSRQCW Trigger: CCAGCACTGCCGGGATGTCAACGAGTGCCTGACCAT...GAAGAGTATGTACCTCAGGTCCTCACTCAAGAGCTTGGCTGATACTGGGCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CAA 90 bp | ATCATAGTTCCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGAATCGGCCTGGCTCGTaGACACAGCGGTACTGGCAG | + |
Preference number: 5 (lower is better) Translates to: IIVPLSRTVIPRPPGLLKNRPGS*TQRYWQ Trigger: CTGCCAGTACCGCTGTGTCAACGAGCCAGGCCGATT...CTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGGAACTATGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CAA 90 bp | AAACTCCTAGCACTGACCAGAACATGGTTCCTGGGCCCAGTATCAGCCAAGCTCAATCGGCCTGGCTCGTaGACACAGCGGTACTGGCAG | + |
Preference number: 5 (lower is better) Translates to: KLLALTRTWFLGPVSAKLNRPGS*TQRYWQ Trigger: CTGCCAGTACCGCTGTGTCAACGAGCCAGGCCGATT...GAGCTTGGCTGATACTGGGCCCAGGAACCATGTTCTGGTCAGTGCTAGGAGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CAA 90 bp | CCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGCAGGGTAGACAGAGGTaGCCTGGATCTGAAACACGT | + |
Preference number: 5 (lower is better) Translates to: PLSRTVIPRPPGLLKLWEQGRQR*PGSETR Trigger: ACGTGTTTCAGATCCAGGCAACCTCTGTCTACCCTG...CTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS TCA 90 bp | CCACACAACGGTTGGTGTCCACACAGCGGTAACCCCCATGGAAGTTaGCACAGGTTTGGGCCTCAGAACATTGGTGTGCACCTGTTTCAC | + |
Preference number: 5 (lower is better) Translates to: PHNGWCPHSGNPHGS*HRFGPQNIGVHLFH Trigger: GTGAAACAGGTGCACACCAATGTTCTGAGGCCCAAACCTGTGTCAACTTCCATGGGGGTTACCGCTGTGTGGACACCAACCGTTGTGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENSMUST00000070118.14 ENSMUST00000164388.2 ENSMUST00000165485.8 ENSMUST00000166253.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000168330.2 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS TCA 90 bp | TTGCCTGGATCTGAAACACGTCAGCAGGCACACTTCGCTCTGAGGTaGTGCTCATGTAGCGGTGCACAATGGATGAAGGCTGCTCTCGAC | + |
Preference number: 5 (lower is better) Translates to: LPGSETRQQAHFALR*CSCSGAQWMKAALD Trigger: GTCGAGAGCAGCCTTCATCCATTGTGCACCGCTACATGAGCATCACCTCAGAGCGAAGTGTGCCTGCTGACGTGTTTCAGATCCAGGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000070118.14 ENSMUST00000164388.2 ENSMUST00000165485.8 ENSMUST00000166253.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CAA 90 bp | AGAACATGGTTCCTGGGCCCAGTATCAGCCAAGCTCTTGAGTGAGGACCTGAGGCAGGGTAGACAGAGGTaGCCTGGATCTGAAACACGT | + |
Preference number: 5 (lower is better) Translates to: RTWFLGPVSAKLLSEDLRQGRQR*PGSETR Trigger: ACGTGTTTCAGATCCAGGCAACCTCTGTCTACCCTG...CCTCAGGTCCTCACTCAAGAGCTTGGCTGATACTGGGCCCAGGAACCATGTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CAA 90 bp | TTGGCTCTGAAACCTCAGCCTGACTGGAGAGGACCCCTTGTGTGGAACTCACCTCAGGGTAGACAGAGGTaGCCTGGATCTGAAACACGT | + |
Preference number: 5 (lower is better) Translates to: LALKPQPDWRGPLVWNSPQGRQR*PGSETR Trigger: ACGTGTTTCAGATCCAGGCAACCTCTGTCTACCCTG...AGGTGAGTTCCACACAAGGGGTCCTCTCCAGTCAGGCTGAGGTTTCAGAGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CAA 90 bp | TTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGGGGGCTGACATTGTTGATTaGCCTAATGTAGAAGTCCCC | + |
Preference number: 5 (lower is better) Translates to: LSRTVIPRPPGLLKLWEGADIVD*PNVEVP Trigger: GGGGACTTCTACATTAGGCAAATCAACAATGTCAGC...CCCCTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CAA 90 bp | CCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGCTATGGGAGGCTGACATTGTTGATTaGCCTAATGTAGAAGTCCCC | + |
Preference number: 5 (lower is better) Translates to: PLSRTVIPRPPGLLKLWEADIVD*PNVEVP Trigger: GGGGACTTCTACATTAGGCAAATCAACAATGTCAGC...CTCCCATAGCTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS GCA 90 bp | ACCCCCATGGAAGTTGACACAGGTTTGGGCCTCAGAACATTGGTGTaGACCTGTTTCACACTCGTCAATATCTTGGCAGAGCCTTGTAGC | + |
Preference number: 5 (lower is better) Translates to: TPMEVDTGLGLRTLV*TCFTLVNILAEPCS Trigger: GCTACAAGGCTCTGCCAAGATATTGACGAGTGTGAAACAGGTGCACACCAATGTTCTGAGGCCCAAACCTGTGTCAACTTCCATGGGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENSMUST00000070118.14 ENSMUST00000164388.2 ENSMUST00000165485.8 ENSMUST00000166253.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000168330.2 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CAA 90 bp | CAGCCAGGACTCCTTCTTTCTCCCTTTATTGTCCTTCACATCATAGTTCCTTTAATGGTCAGGCACTCGTaGACATCCCGGCAGTGCTGG | + |
Preference number: 5 (lower is better) Translates to: QPGLLLSPFIVLHIIVPLMVRHS*TSRQCW Trigger: CCAGCACTGCCGGGATGTCAACGAGTGCCTGACCAT...TAAAGGAACTATGATGTGAAGGACAATAAAGGGAGAAAGAAGGAGTCCTGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CAA 90 bp | ACCCTAAATATGGATGGCTGGATAATAGATAAACACTCCTTAGGGGCTGGGAATTCTCGACAAAGGGGATaGGAGGCAGGGCAGAGGCAG | + |
Preference number: 5 (lower is better) Translates to: TLNMDGWIIDKHSLGAGNSRQRG*EAGQRQ Trigger: CTGCCTCTGCCCTGCCTCCAATCCCCTTTGTCGAGA...ATTCCCAGCCCCTAAGGAGTGTTTATCTATTATCCAGCCATCCATATTTAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CAA 90 bp | ATCATAGTTCCTTTAAGCAGAACGGTCATCCCTAGGCCCCCGGGGCTGCTTAAGGCTGACATTGTTGATTaGCCTAATGTAGAAGTCCCC | + |
Preference number: 5 (lower is better) Translates to: IIVPLSRTVIPRPPGLLKADIVD*PNVEVP Trigger: GGGGACTTCTACATTAGGCAAATCAACAATGTCAGC...CTTAAGCAGCCCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGGAACTATGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CAA 90 bp | CTGGGCCCAGTATCAGCCAAGCTCTTGAGTGAGGACCTGAGGTACATACTCTTCGCTGACATTGTTGATTaGCCTAATGTAGAAGTCCCC | + |
Preference number: 5 (lower is better) Translates to: LGPVSAKLLSEDLRYILFADIVD*PNVEVP Trigger: GGGGACTTCTACATTAGGCAAATCAACAATGTCAGC...GAAGAGTATGTACCTCAGGTCCTCACTCAAGAGCTTGGCTGATACTGGGCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CAA 90 bp | AAACTCCTAGCACTGACCAGAACATGGTTCCTGGGCCCAGTATCAGCCAAGCTCGCTGACATTGTTGATTaGCCTAATGTAGAAGTCCCC | + |
Preference number: 5 (lower is better) Translates to: KLLALTRTWFLGPVSAKLADIVD*PNVEVP Trigger: GGGGACTTCTACATTAGGCAAATCAACAATGTCAGC...GAGCTTGGCTGATACTGGGCCCAGGAACCATGTTCTGGTCAGTGCTAGGAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS-3UTR CAA 90 bp | ACCCTAAATATGGATGGCTGGATAATAGATAAACACTCCTTAGGGGCTGGGAATGCTGACATTGTTGATTaGCCTAATGTAGAAGTCCCC | + |
Preference number: 5 (lower is better) Translates to: TLNMDGWIIDKHSLGAGNADIVD*PNVEVP Trigger: GGGGACTTCTACATTAGGCAAATCAACAATGTCAGC...ATTCCCAGCCCCTAAGGAGTGTTTATCTATTATCCAGCCATCCATATTTAGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000166303.9 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS TCA 72 bp | CACCCTTGCAAGCCTCCGGGATGGTCAGGCACTCGTTaGCATCTGCAGAGAGGGGCCTGCTGGGCACAGCCA | + |
Preference number: 6 (lower is better) Translates to: HPCKPPGWSGTR*HLQRGACWAQP Trigger: TGGCTGTGCCCAGCAGGCCCCTCTCTGCAGATGTCAACGAGTGCCTGACCATCCCGGAGGCTTGCAAGGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169943.8 |
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CDS CAA 72 bp | TCACCCTTGCAAGCCTCCGGGATGGTCAGGCACTCGTaGACATCTGCAGAGAGGGGCCTGCTGGGCACAGCC | + |
Preference number: 6 (lower is better) Translates to: SPLQASGMVRHS*TSAERGLLGTA Trigger: GGCTGTGCCCAGCAGGCCCCTCTCTGCAGATGTCAACGAGTGCCTGACCATCCCGGAGGCTTGCAAGGGTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169943.8 |
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CDS CCA 72 bp | GCATTCCGTGTAGCTGTCCGGCTCCTCGGGATCCTGTaGGGACGCTGCTCCCAAGAGCAACAGCAGAAACGC | + |
Preference number: 6 (lower is better) Translates to: AFRVAVRLLGIL*GRCSQEQQQKR Trigger: GCGTTTCTGCTGTTGCTCTTGGGAGCAGCGTCCCCACAGGATCCCGAGGAGCCGGACAGCTACACGGAATGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166253.8 ENSMUST00000166303.9 ENSMUST00000167304.8 ENSMUST00000167371.8 ENSMUST00000169943.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS CAA 90 bp | CTCGTCAATATCTTGGCAGAGCCTTGTAGCCAGCAGCTGGTAGCCTaGTGGGCAGTGACAGGAGAATCGGCCTGGCTCGTTGACACAGCG | + |
Preference number: 6 (lower is better) Translates to: LVNILAEPCSQQLVA*WAVTGESAWLVDTA Trigger: CGCTGTGTCAACGAGCCAGGCCGATTCTCCTGTCACTGCCCACAAGGCTACCAGCTGCTGGCTACAAGGCTCTGCCAAGATATTGACGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000070118.14 ENSMUST00000164388.2 ENSMUST00000165485.8 ENSMUST00000166253.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS TCA 72 bp | AAGGGGATTGGAGGCAGGGCAGAGGCAGCGGTTGTCTaGCACTTGGACATAGGGCTCCACACAACGGTTGGT | + |
Preference number: 6 (lower is better) Translates to: KGIGGRAEAAVV*HLDIGLHTTVG Trigger: ACCAACCGTTGTGTGGAGCCCTATGTCCAAGTGTCAGACAACCGCTGCCTCTGCCCTGCCTCCAATCCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000070118.14 ENSMUST00000164388.2 ENSMUST00000165485.8 ENSMUST00000166253.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS CAA 72 bp | ATCTTGGCAGAGCCTTGTAGCCAGCAGCTGGTAGCCTaGTGGGCAGTGACAGGAGAATCGGCCTGGCTCGTT | + |
Preference number: 6 (lower is better) Translates to: ILAEPCSQQLVA*WAVTGESAWLV Trigger: AACGAGCCAGGCCGATTCTCCTGTCACTGCCCACAAGGCTACCAGCTGCTGGCTACAAGGCTCTGCCAAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000070118.14 ENSMUST00000164388.2 ENSMUST00000165485.8 ENSMUST00000166253.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS GCA 72 bp | AGAGGTAACTGGAGTAGCCGCACTCATCGATATCGCTaGAGGAGAAGCCATCCCGGTGCAGCTCATAGCCCT | + |
Preference number: 6 (lower is better) Translates to: RGNWSSRTHRYR*RRSHPGAAHSP Trigger: AGGGCTATGAGCTGCACCGGGATGGCTTCTCCTGCAGCGATATCGATGAGTGCGGCTACTCCAGTTACCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000070118.14 ENSMUST00000165485.8 ENSMUST00000166253.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000167827.2 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS TCA 72 bp | GGTTGGTGTCCACACAGCGGTAACCCCCATGGAAGTTaGCACAGGTTTGGGCCTCAGAACATTGGTGTGCAC | + |
Preference number: 6 (lower is better) Translates to: GWCPHSGNPHGS*HRFGPQNIGVH Trigger: GTGCACACCAATGTTCTGAGGCCCAAACCTGTGTCAACTTCCATGGGGGTTACCGCTGTGTGGACACCAACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENSMUST00000070118.14 ENSMUST00000164388.2 ENSMUST00000165485.8 ENSMUST00000166253.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000168330.2 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS CAA 90 bp | GGCCTCAGAACATTGGTGTGCACCTGTTTCACACTCGTCAATATCTaGGCAGAGCCTTGTAGCCAGCAGCTGGTAGCCTTGTGGGCAGTG | + |
Preference number: 6 (lower is better) Translates to: GLRTLVCTCFTLVNI*AEPCSQQLVALWAV Trigger: CACTGCCCACAAGGCTACCAGCTGCTGGCTACAAGGCTCTGCCAAGATATTGACGAGTGTGAAACAGGTGCACACCAATGTTCTGAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000070118.14 ENSMUST00000164388.2 ENSMUST00000165485.8 ENSMUST00000166253.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS CAA 90 bp | CAGAACGGATCTGAAAGGCATTGTAGGCACCAGGGTAGACAGAGGTaGCCTGGATCTGAAACACGTCAGCAGGCACACTTCGCTCTGAGG | + |
Preference number: 6 (lower is better) Translates to: QNGSERHCRHQGRQR*PGSETRQQAHFALR Trigger: CCTCAGAGCGAAGTGTGCCTGCTGACGTGTTTCAGATCCAGGCAACCTCTGTCTACCCTGGTGCCTACAATGCCTTTCAGATCCGTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000070118.14 ENSMUST00000164388.2 ENSMUST00000165485.8 ENSMUST00000166253.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS TCA 72 bp | CAGAGCGAGGCAGACACAAATAACCCCCGTAGTGGTTaGTGCATTTCATCTCACCCTTGCAAGCCTCCGGGA | + |
Preference number: 6 (lower is better) Translates to: QSEADTNNPRSG*CISSHPCKPPG Trigger: TCCCGGAGGCTTGCAAGGGTGAGATGAAATGCATCAACCACTACGGGGGTTATTTGTGTCTGCCTCGCTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000070118.14 ENSMUST00000164204.2 ENSMUST00000165485.8 ENSMUST00000166303.9 ENSMUST00000167304.8 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS GCA 72 bp | CTGAAAGGCATTGTAGGCACCAGGGTAGACAGAGGTTaGCTGGATCTGAAACACGTCAGCAGGCACACTTCG | + |
Preference number: 6 (lower is better) Translates to: LKGIVGTRVDRG*LDLKHVSRHTS Trigger: CGAAGTGTGCCTGCTGACGTGTTTCAGATCCAGGCAACCTCTGTCTACCCTGGTGCCTACAATGCCTTTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000070118.14 ENSMUST00000164388.2 ENSMUST00000165485.8 ENSMUST00000166253.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS TCA 72 bp | TCTGAAACACGTCAGCAGGCACACTTCGCTCTGAGGTaGTGCTCATGTAGCGGTGCACAATGGATGAAGGCT | + |
Preference number: 6 (lower is better) Translates to: SETRQQAHFALR*CSCSGAQWMKA Trigger: AGCCTTCATCCATTGTGCACCGCTACATGAGCATCACCTCAGAGCGAAGTGTGCCTGCTGACGTGTTTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000070118.14 ENSMUST00000164388.2 ENSMUST00000165485.8 ENSMUST00000166253.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS CAA 72 bp | TCTGAAAGGCATTGTAGGCACCAGGGTAGACAGAGGTaGCCTGGATCTGAAACACGTCAGCAGGCACACTTC | + |
Preference number: 6 (lower is better) Translates to: SERHCRHQGRQR*PGSETRQQAHF Trigger: GAAGTGTGCCTGCTGACGTGTTTCAGATCCAGGCAACCTCTGTCTACCCTGGTGCCTACAATGCCTTTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000070118.14 ENSMUST00000164388.2 ENSMUST00000165485.8 ENSMUST00000166253.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS CAA 90 bp | GCGGTAACCCCCATGGAAGTTGACACAGGTTTGGGCCTCAGAACATaGGTGTGCACCTGTTTCACACTCGTCAATATCTTGGCAGAGCCT | + |
Preference number: 6 (lower is better) Translates to: AVTPMEVDTGLGLRT*VCTCFTLVNILAEP Trigger: AGGCTCTGCCAAGATATTGACGAGTGTGAAACAGGTGCACACCAATGTTCTGAGGCCCAAACCTGTGTCAACTTCCATGGGGGTTACCGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENSMUST00000070118.14 ENSMUST00000164388.2 ENSMUST00000165485.8 ENSMUST00000166253.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000168330.2 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS TCA 72 bp | TGCTCATGTAGCGGTGCACAATGGATGAAGGTTGTCTaGCACTTGGACATAGGGCTCCACACAACGGTTGGT | + |
Preference number: 6 (lower is better) Translates to: CSCSGAQWMKVV*HLDIGLHTTVG Trigger: ACCAACCGTTGTGTGGAGCCCTATGTCCAAGTGTCAGACAACCTTCATCCATTGTGCACCGCTACATGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168330.2 |
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CDS CCA 72 bp | CCATGGAAGTTGACACAGGTTTGGGCCTCAGAACATTaGTGTGCACCTGTTTCACACTCGTCAATATCTTGG | + |
Preference number: 6 (lower is better) Translates to: PWKLTQVWASEH*CAPVSHSSISW Trigger: CCAAGATATTGACGAGTGTGAAACAGGTGCACACCAATGTTCTGAGGCCCAAACCTGTGTCAACTTCCATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000070118.14 ENSMUST00000164388.2 ENSMUST00000165485.8 ENSMUST00000166253.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000168330.2 ENSMUST00000235523.2 ENSMUST00000236518.2 |
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CDS CAA 72 bp | CCCATGGAAGTTGACACAGGTTTGGGCCTCAGAACATaGGTGTGCACCTGTTTCACACTCGTCAATATCTTG | + |
Preference number: 6 (lower is better) Translates to: PMEVDTGLGLRT*VCTCFTLVNIL Trigger: CAAGATATTGACGAGTGTGAAACAGGTGCACACCAATGTTCTGAGGCCCAAACCTGTGTCAACTTCCATGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000070118.14 ENSMUST00000164388.2 ENSMUST00000165485.8 ENSMUST00000166253.8 ENSMUST00000166303.9 ENSMUST00000167371.8 ENSMUST00000168330.2 ENSMUST00000235523.2 ENSMUST00000236518.2 |