Pregenerated sensors for EFEMP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020467Ensembl transcript IDs: ENSMUST00000020759.12, ENSMUST00000139713.2
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCTCCTTCTTGATCTTCATGCTAAGATGGCCAATTCTCACGGGATaGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGTAT | + |
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Preference number: 1 (lower is better) Translates to: PSFLIFMLRWPILTG*SVEVYISLYNTEQY Trigger: ATACTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGTGAGAATTGGCCATCTTAGCATGAAGATCAAGAAGGAGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020759.12 ENSMUST00000139713.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTCACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGTTGCTTGGTCCCATTTTaGAGGAAAGAATCCAAGTTT | + |
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Preference number: 2 (lower is better) Translates to: FSRDGLWRCIFLYTTQNSCLVPF*RKESKF Trigger: AAACTTGGATTCTTTCCTGCAAAATGGGACCAAGCA...ACTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGTGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020759.12 ENSMUST00000139713.2 |
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| CDS-3UTR CCA 90 bp | TTCTCACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGTCAGGCACCACACCACTaGTTGCCATGCTCCTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: FSRDGLWRCIFLYTTQNSQAPHH*LPCSWQ Trigger: CTGCCAGGAGCATGGCAACCAGTGGTGTGGTGCCTG...ACTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGTGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS-3UTR GCA 90 bp | TTCTCACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGTCACCACTGGTTGCCATaGTCCTGGCAGCTACAGTCC | + |
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Preference number: 4 (lower is better) Translates to: FSRDGLWRCIFLYTTQNSHHWLP*SWQLQS Trigger: GGACTGTAGCTGCCAGGAGCATGGCAACCAGTGGTG...ACTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGTGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS-3UTR GCA 90 bp | ATTCTCACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGCACCACACCACTGGTTaGCATGCTCCTGGCAGCTAC | + |
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Preference number: 4 (lower is better) Translates to: ILTGWSVEVYISLYNTEQHHTTG*HAPGSY Trigger: GTAGCTGCCAGGAGCATGGCAACCAGTGGTGTGGTG...CTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGTGAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS-3UTR CCA 90 bp | CTCTATACAACACAGAACAGTATCCTTGCTTGGTCCCATTTTGCAGGAAAGAATTCCGGTGGGAAGGGTTaGAAGGGATGCGCTGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: LYTTQNSILAWSHFAGKNSGGKG*KGCAEG Trigger: ACCCTCAGCGCATCCCTTCCAACCCTTCCCACCGGA...ATTCTTTCCTGCAAAATGGGACCAAGCAAGGATACTGTTCTGTGTTGTATAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS-3UTR TCA 90 bp | TCTATACAACACAGAACAGTATCCTTGCTTGGTCCCATTTTGCAGGAAAGAATCCGGTGTACTGTGACTTaGCCAGCGCCAGAGTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: SIQHRTVSLLGPILQERIRCTVT*PAPESA Trigger: TGCTGACTCTGGCGCTGGTCAAGTCACAGTACACCG...GATTCTTTCCTGCAAAATGGGACCAAGCAAGGATACTGTTCTGTGTTGTATAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS-3UTR TCA 90 bp | ATTCTCACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGTTGTTTGCTGCCAGCTaGAACCCTGGACTGCACTGG | + |
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Preference number: 4 (lower is better) Translates to: ILTGWSVEVYISLYNTEQLFAAS*NPGLHW Trigger: CCAGTGCAGTCCAGGGTTTCAGCTGGCAGCAAACAA...CTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGTGAGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS-3UTR CCA 90 bp | TTCTCACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGTCTACAGTCCCAGTGGTaGCACCTGACGAAGCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: FSRDGLWRCIFLYTTQNSLQSQW*HLTKLL Trigger: CAGAAGCTTCGTCAGGTGCCACCACTGGGACTGTAG...ACTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGTGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS-3UTR CCA 90 bp | TCTATACAACACAGAACAGTATCCTTGCTTGGTCCCATTTTGCAGGAAAGAATCTGGTTGCCATGCTCCTaGCAGCTACAGTCCCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: SIQHRTVSLLGPILQERIWLPCS*QLQSQW Trigger: CCACTGGGACTGTAGCTGCCAGGAGCATGGCAACCA...GATTCTTTCCTGCAAAATGGGACCAAGCAAGGATACTGTTCTGTGTTGTATAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS-3UTR CCA 90 bp | CTCTATACAACACAGAACAGTATCCTTGCTTGGTCCCATTTTGCAGGAAAGAATGCACACTGGATCCGGTaGGAAGGGTTGGAAGGGATG | + |
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Preference number: 4 (lower is better) Translates to: LYTTQNSILAWSHFAGKNAHWIR*EGLEGM Trigger: CATCCCTTCCAACCCTTCCCACCGGATCCAGTGTGC...ATTCTTTCCTGCAAAATGGGACCAAGCAAGGATACTGTTCTGTGTTGTATAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS-3UTR TCA 90 bp | TCTATACAACACAGAACAGTATCCTTGCTTGGTCCCATTTTGCAGGAAAGAATCTTCCTCGGTGTACTGTaGCTTGACCAGCGCCAGAGT | + |
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Preference number: 4 (lower is better) Translates to: SIQHRTVSLLGPILQERIFLGVL*LDQRQS Trigger: ACTCTGGCGCTGGTCAAGTCACAGTACACCGAGGAA...GATTCTTTCCTGCAAAATGGGACCAAGCAAGGATACTGTTCTGTGTTGTATAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS-3UTR TCA 90 bp | CTCTATACAACACAGAACAGTATCCTTGCTTGGTCCCATTTTGCAGGAAAGAATTTGGAAGGGATGCGCTaGGGGTCAGCTGGGTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: LYTTQNSILAWSHFAGKNLEGMR*GSAGFL Trigger: AAGAAACCCAGCTGACCCTCAGCGCATCCCTTCCAA...ATTCTTTCCTGCAAAATGGGACCAAGCAAGGATACTGTTCTGTGTTGTATAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS-3UTR TCA 90 bp | ACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGTATCCTCCGGCACATAGTGTTTaGGACTGGGCAAACACATCG | + |
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Preference number: 4 (lower is better) Translates to: TGWSVEVYISLYNTEQYPPAHSV*DWANTS Trigger: CGATGTGTTTGCCCAGTCTCAAACACTATGTGCCGG...AGGATACTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020759.12 ENSMUST00000139713.2 |
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| CDS-3UTR GCA 90 bp | TTCTCACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGTACTCTGTTCATAGCCTaGTGCACACTGGATCCGGTG | + |
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Preference number: 4 (lower is better) Translates to: FSRDGLWRCIFLYTTQNSTLFIA*CTLDPV Trigger: CACCGGATCCAGTGTGCAGCAGGCTATGAACAGAGT...ACTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGTGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS-3UTR GCA 90 bp | ATTCTCACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGGCTGAAACCCTGGACTaGACTGGCAGTAGAAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: ILTGWSVEVYISLYNTEQAETLD*TGSRRN Trigger: GTTCCTTCTACTGCCAGTGCAGTCCAGGGTTTCAGC...CTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGTGAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS-3UTR CCA 90 bp | CTCTATACAACACAGAACAGTATCCTTGCTTGGTCCCATTTTGCAGGAAAGAATCAGCTACAGTCCCAGTaGTGGCACCTGACGAAGCTT | + |
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Preference number: 4 (lower is better) Translates to: LYTTQNSILAWSHFAGKNQLQSQ*WHLTKL Trigger: AAGCTTCGTCAGGTGCCACCACTGGGACTGTAGCTG...ATTCTTTCCTGCAAAATGGGACCAAGCAAGGATACTGTTCTGTGTTGTATAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS-3UTR CCA 90 bp | ATTCTCACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGGCGCTGAGGGTCAGCTaGGTTTCTTCGGATGACAAA | + |
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Preference number: 4 (lower is better) Translates to: ILTGWSVEVYISLYNTEQALRVS*VSSDDK Trigger: TTTGTCATCCGAAGAAACCCAGCTGACCCTCAGCGC...CTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGTGAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS-3UTR CCA 90 bp | ACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGTATCCTTGCCAGCTGAAACCCTaGACTGCACTGGCAGTAGAA | + |
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Preference number: 4 (lower is better) Translates to: TGWSVEVYISLYNTEQYPCQLKP*TALAVE Trigger: TTCTACTGCCAGTGCAGTCCAGGGTTTCAGCTGGCA...AGGATACTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS-3UTR CCA 90 bp | TTCTCACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGTTGTATTTGTAGACAATaGACTGGGGCAGCTCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: FSRDGLWRCIFLYTTQNSCICRQ*TGAAPG Trigger: GCCGGGAGCTGCCCCAGTCCATTGTCTACAAATACA...ACTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGTGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020759.12 ENSMUST00000139713.2 |
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| CDS-3UTR TCA 90 bp | TCTATACAACACAGAACAGTATCCTTGCTTGGTCCCATTTTGCAGGAAAGAATCCCGGCACATAGTGTTTaGGACTGGGCAAACACATCG | + |
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Preference number: 4 (lower is better) Translates to: SIQHRTVSLLGPILQERIPAHSV*DWANTS Trigger: CGATGTGTTTGCCCAGTCTCAAACACTATGTGCCGG...GATTCTTTCCTGCAAAATGGGACCAAGCAAGGATACTGTTCTGTGTTGTATAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020759.12 ENSMUST00000139713.2 |
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| CDS-3UTR GCA 90 bp | TCTATACAACACAGAACAGTATCCTTGCTTGGTCCCATTTTGCAGGAAAGAATCTTCAGGGCCAGCAACTaGAGTAGCACTGGCCATGAA | + |
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Preference number: 4 (lower is better) Translates to: SIQHRTVSLLGPILQERIFRASN*SSTGHE Trigger: TTCATGGCCAGTGCTACTGCAGTTGCTGGCCCTGAA...GATTCTTTCCTGCAAAATGGGACCAAGCAAGGATACTGTTCTGTGTTGTATAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS-3UTR GCA 90 bp | ATTCTCACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGCACAAGCACCAGCATTaGACTCACAGGGCTTGTTTG | + |
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Preference number: 4 (lower is better) Translates to: ILTGWSVEVYISLYNTEQHKHQH*THRACL Trigger: CAAACAAGCCCTGTGAGTGCAATGCTGGTGCTTGTG...CTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGTGAGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020759.12 ENSMUST00000139713.2 |
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| CDS-3UTR CCA 90 bp | ATTCTCACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGCGAAGCTTCTGCAGCTaGTGTTTCTTGCTGAGGATG | + |
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Preference number: 4 (lower is better) Translates to: ILTGWSVEVYISLYNTEQRSFCS*CFLLRM Trigger: CATCCTCAGCAAGAAACACCAGCTGCAGAAGCTTCG...CTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGTGAGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS-3UTR CCA 90 bp | TCTATACAACACAGAACAGTATCCTTGCTTGGTCCCATTTTGCAGGAAAGAATCTGTATTTGTAGACAATaGACTGGGGCAGCTCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: SIQHRTVSLLGPILQERICICRQ*TGAAPG Trigger: GCCGGGAGCTGCCCCAGTCCATTGTCTACAAATACA...GATTCTTTCCTGCAAAATGGGACCAAGCAAGGATACTGTTCTGTGTTGTATAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020759.12 ENSMUST00000139713.2 |
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| CDS-3UTR TCA 90 bp | CTCTATACAACACAGAACAGTATCCTTGCTTGGTCCCATTTTGCAGGAAAGAATTACCCAGGAAGACACTaGCATGTGAAGGAACCTCGT | + |
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Preference number: 4 (lower is better) Translates to: LYTTQNSILAWSHFAGKNYPGRH*HVKEPR Trigger: ACGAGGTTCCTTCACATGTCAGTGTCTTCCTGGGTA...ATTCTTTCCTGCAAAATGGGACCAAGCAAGGATACTGTTCTGTGTTGTATAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS-3UTR TCA 90 bp | TTCTCACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGTCTGTGGGCACATACATaGGAACTTCCCAGGTTCATT | + |
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Preference number: 4 (lower is better) Translates to: FSRDGLWRCIFLYTTQNSLWAHT*ELPRFI Trigger: AATGAACCTGGGAAGTTCTCATGTATGTGCCCACAG...ACTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGTGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS-3UTR GCA 90 bp | ATTCTCACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGTGTGAGTCCCTGAGGTaGACTCATCAATATCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: ILTGWSVEVYISLYNTEQCESLR*THQYLG Trigger: GCCAAGATATTGATGAGTGCACCTCAGGGACTCACA...CTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGTGAGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS-3UTR TCA 90 bp | TTCTCACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGTGCTGGTGTTTCTTGCTaGGGATGCTCATTATTGACA | + |
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Preference number: 4 (lower is better) Translates to: FSRDGLWRCIFLYTTQNSAGVSC*GCSLLT Trigger: TGTCAATAATGAGCATCCTCAGCAAGAAACACCAGC...ACTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGTGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS-3UTR TCA 90 bp | TCTATACAACACAGAACAGTATCCTTGCTTGGTCCCATTTTGCAGGAAAGAATCTTATTTCGGCCAGTTTaGACTTCAGGGCCAGCAACT | + |
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Preference number: 4 (lower is better) Translates to: SIQHRTVSLLGPILQERILFRPV*TSGPAT Trigger: AGTTGCTGGCCCTGAAGTTCAAACTGGCCGAAATAA...GATTCTTTCCTGCAAAATGGGACCAAGCAAGGATACTGTTCTGTGTTGTATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS-3UTR TCA 90 bp | TCTATACAACACAGAACAGTATCCTTGCTTGGTCCCATTTTGCAGGAAAGAATCCTGGGTTTCTTCGGATaGCAAAGTTATTTCGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SIQHRTVSLLGPILQERILGFFG*QSYFGQ Trigger: CTGGCCGAAATAACTTTGTCATCCGAAGAAACCCAG...GATTCTTTCCTGCAAAATGGGACCAAGCAAGGATACTGTTCTGTGTTGTATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS-3UTR TCA 90 bp | ATTCTCACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGCGATGTCTTCACAGTTaGGTCTGTCACTGCTTAGTT | + |
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Preference number: 4 (lower is better) Translates to: ILTGWSVEVYISLYNTEQRCLHS*VCHCLV Trigger: AACTAAGCAGTGACAGACTCAACTGTGAAGACATCG...CTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGTGAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS-3UTR GCA 90 bp | TCTATACAACACAGAACAGTATCCTTGCTTGGTCCCATTTTGCAGGAAAGAATCGGTAGCTTGAGGTTCTaGATTCGTCGATGTCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: SIQHRTVSLLGPILQERIGSLRF*IRRCLH Trigger: GTGAAGACATCGACGAATGCAGAACCTCAAGCTACC...GATTCTTTCCTGCAAAATGGGACCAAGCAAGGATACTGTTCTGTGTTGTATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS-3UTR CCA 90 bp | ACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGTATCCTATTGTTGCCTGTATCTaGAAGATGTCTGAAGGCACG | + |
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Preference number: 4 (lower is better) Translates to: TGWSVEVYISLYNTEQYPIVACI*KMSEGT Trigger: CGTGCCTTCAGACATCTTCCAGATACAGGCAACAAT...AGGATACTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020759.12 ENSMUST00000139713.2 |
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| CDS-3UTR CCA 90 bp | ATTCTCACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGATTGTTGCCTGTATCTaGAAGATGTCTGAAGGCACG | + |
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Preference number: 4 (lower is better) Translates to: ILTGWSVEVYISLYNTEQIVACI*KMSEGT Trigger: CGTGCCTTCAGACATCTTCCAGATACAGGCAACAAT...CTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGTGAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020759.12 ENSMUST00000139713.2 |
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| CDS-3UTR TCA 90 bp | TTCTCACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGTATCCTCCATAGTGGTTaGCACATTTCATTCCACCTT | + |
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Preference number: 4 (lower is better) Translates to: FSRDGLWRCIFLYTTQNSILHSG*HISFHL Trigger: AAGGTGGAATGAAATGTGTCAACCACTATGGAGGAT...ACTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGTGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS-3UTR TCA 90 bp | ACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGTATCCTACACTGACAGATGAATaGGCCAAGAATGTTGTAGCA | + |
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Preference number: 4 (lower is better) Translates to: TGWSVEVYISLYNTEQYPTLTDE*AKNVVA Trigger: TGCTACAACATTCTTGGCTCATTCATCTGTCAGTGT...AGGATACTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020759.12 ENSMUST00000139713.2 |
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| CDS-3UTR GCA 90 bp | TCTATACAACACAGAACAGTATCCTTGCTTGGTCCCATTTTGCAGGAAAGAATCTATCCATCGGTGCATTaGGTGTATGTGATGGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: SIQHRTVSLLGPILQERIYPSVH*VYVMVS Trigger: GGAAACCATCACATACACGCAATGCACCGATGGATA...GATTCTTTCCTGCAAAATGGGACCAAGCAAGGATACTGTTCTGTGTTGTATAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS-3UTR GCA 90 bp | TTCTCACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGTGTTGAGCACACTGGTTaGTGGCATCACATTCATTTA | + |
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Preference number: 4 (lower is better) Translates to: FSRDGLWRCIFLYTTQNSVEHTG*WHHIHL Trigger: TAAATGAATGTGATGCCAGCAACCAGTGTGCTCAAC...ACTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGTGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS-3UTR CCA 90 bp | TCTATACAACACAGAACAGTATCCTTGCTTGGTCCCATTTTGCAGGAAAGAATCTCTTTGGTGGCAATATaGAGGCACTGTGCATTCATC | + |
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Preference number: 4 (lower is better) Translates to: SIQHRTVSLLGPILQERISLVAI*RHCAFI Trigger: GATGAATGCACAGTGCCTCCATATTGCCACCAAAGA...GATTCTTTCCTGCAAAATGGGACCAAGCAAGGATACTGTTCTGTGTTGTATAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS-3UTR CCA 90 bp | TTCTCACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGTTTAACACATCTTTGGTaGCAATATGGAGGCACTGTG | + |
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Preference number: 4 (lower is better) Translates to: FSRDGLWRCIFLYTTQNSLTHLW*QYGGTV Trigger: CACAGTGCCTCCATATTGCCACCAAAGATGTGTTAA...ACTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGTGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS-3UTR CCA 90 bp | ACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGTATCCTGTGTTAACACATCTTTaGTGGCAATATGGAGGCACT | + |
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Preference number: 4 (lower is better) Translates to: TGWSVEVYISLYNTEQYPVLTHL*WQYGGT Trigger: AGTGCCTCCATATTGCCACCAAAGATGTGTTAACAC...AGGATACTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS-3UTR TCA 90 bp | TTCTCACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGTGATTACACTGACAGATaGATGAGCCAAGAATGTTGT | + |
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Preference number: 4 (lower is better) Translates to: FSRDGLWRCIFLYTTQNSDYTDR*MSQECC Trigger: ACAACATTCTTGGCTCATTCATCTGTCAGTGTAATC...ACTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGTGAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020759.12 ENSMUST00000139713.2 |
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| CDS-3UTR GCA 90 bp | TTCTCACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGTATTTCATTCCACCTTTaGAAGCATCTGGGACAATGT | + |
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Preference number: 4 (lower is better) Translates to: FSRDGLWRCIFLYTTQNSISFHL*KHLGQC Trigger: ACATTGTCCCAGATGCTTGCAAAGGTGGAATGAAAT...ACTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGTGAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS-3UTR GCA 90 bp | TTCTCACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGTAATATGGAGGCACTGTaGATTCATCTATATCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: FSRDGLWRCIFLYTTQNSNMEAL*IHLYPH Trigger: GTGTGGATATAGATGAATGCACAGTGCCTCCATATT...ACTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGTGAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
||
| CDS-3UTR GCA 90 bp | ATTCTCACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGACCTGTCAGATCGGATaGTCATGTATTTGTAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: ILTGWSVEVYISLYNTEQTCQIG*SCICRQ Trigger: TTGTCTACAAATACATGAGCATCCGATCTGACAGGT...CTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGTGAGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020759.12 ENSMUST00000139713.2 |
||
| CDS-3UTR CCA 90 bp | TCTATACAACACAGAACAGTATCCTTGCTTGGTCCCATTTTGCAGGAAAGAATCACCTTTGCAAGCATCTaGGACAATGTCACATTCATC | + |
|
Preference number: 4 (lower is better) Translates to: SIQHRTVSLLGPILQERITFASI*DNVTFI Trigger: GATGAATGTGACATTGTCCCAGATGCTTGCAAAGGT...GATTCTTTCCTGCAAAATGGGACCAAGCAAGGATACTGTTCTGTGTTGTATAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
||
| CDS-3UTR CCA 90 bp | ACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGTATCCTCTTCTCGGCATTCATTaGTGGTCTCACATTCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: TGWSVEVYISLYNTEQYPLLGIH*WSHIHL Trigger: TAAATGAATGTGAGACCACCAATGAATGCCGAGAAG...AGGATACTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020759.12 ENSMUST00000139713.2 |
||
| CDS-3UTR TCA 90 bp | CTCTATACAACACAGAACAGTATCCTTGCTTGGTCCCATTTTGCAGGAAAGAATGATTACACTGACAGATaGATGAGCCAAGAATGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LYTTQNSILAWSHFAGKNDYTDR*MSQECC Trigger: ACAACATTCTTGGCTCATTCATCTGTCAGTGTAATC...ATTCTTTCCTGCAAAATGGGACCAAGCAAGGATACTGTTCTGTGTTGTATAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020759.12 ENSMUST00000139713.2 |
||
| CDS-3UTR TCA 90 bp | CTCTATACAACACAGAACAGTATCCTTGCTTGGTCCCATTTTGCAGGAAAGAATACTTCCCAGGTTCATTaGCACATTGATATTGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: LYTTQNSILAWSHFAGKNTSQVH*HIDIGI Trigger: TATGCCAATATCAATGTGTCAATGAACCTGGGAAGT...ATTCTTTCCTGCAAAATGGGACCAAGCAAGGATACTGTTCTGTGTTGTATAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
||
| CDS-3UTR GCA 90 bp | CTCTATACAACACAGAACAGTATCCTTGCTTGGTCCCATTTTGCAGGAAAGAATTCAATATCTTTACACTaGTGTCTTATGGGGTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LYTTQNSILAWSHFAGKNSISLH*CLMGSH Trigger: ATGGGACCCCATAAGACAGCAGTGTAAAGATATTGA...ATTCTTTCCTGCAAAATGGGACCAAGCAAGGATACTGTTCTGTGTTGTATAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
||
| CDS-3UTR GCA 90 bp | TCTATACAACACAGAACAGTATCCTTGCTTGGTCCCATTTTGCAGGAAAGAATCACCTGTCAGATCGGATaGTCATGTATTTGTAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: SIQHRTVSLLGPILQERITCQIG*SCICRQ Trigger: TTGTCTACAAATACATGAGCATCCGATCTGACAGGT...GATTCTTTCCTGCAAAATGGGACCAAGCAAGGATACTGTTCTGTGTTGTATAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020759.12 ENSMUST00000139713.2 |
||
| CDS-3UTR CCA 90 bp | TCTATACAACACAGAACAGTATCCTTGCTTGGTCCCATTTTGCAGGAAAGAATCGAGCACACTGGTTGCTaGCATCACATTCATTTATAT | + |
|
Preference number: 4 (lower is better) Translates to: SIQHRTVSLLGPILQERIEHTGC*HHIHLY Trigger: ATATAAATGAATGTGATGCCAGCAACCAGTGTGCTC...GATTCTTTCCTGCAAAATGGGACCAAGCAAGGATACTGTTCTGTGTTGTATAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
||
| CDS-3UTR CCA 90 bp | ATTCTCACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGCTCGGCATTCATTGGTaGTCTCACATTCATTTATAT | + |
|
Preference number: 4 (lower is better) Translates to: ILTGWSVEVYISLYNTEQLGIHW*SHIHLY Trigger: ATATAAATGAATGTGAGACCACCAATGAATGCCGAG...CTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGTGAGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020759.12 ENSMUST00000139713.2 |
||
| CDS-3UTR CCA 90 bp | TTCTCACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGTCTCGGCATTCATTGGTaGTCTCACATTCATTTATAT | + |
|
Preference number: 4 (lower is better) Translates to: FSRDGLWRCIFLYTTQNSLGIHW*SHIHLY Trigger: ATATAAATGAATGTGAGACCACCAATGAATGCCGAG...ACTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGTGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020759.12 ENSMUST00000139713.2 |
||
| CDS-3UTR CCA 90 bp | CTCTATACAACACAGAACAGTATCCTTGCTTGGTCCCATTTTGCAGGAAAGAATCTTCTCGGCATTCATTaGTGGTCTCACATTCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: LYTTQNSILAWSHFAGKNLLGIH*WSHIHL Trigger: TAAATGAATGTGAGACCACCAATGAATGCCGAGAAG...ATTCTTTCCTGCAAAATGGGACCAAGCAAGGATACTGTTCTGTGTTGTATAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020759.12 ENSMUST00000139713.2 |
||
| CDS-3UTR TCA 90 bp | TCTATACAACACAGAACAGTATCCTTGCTTGGTCCCATTTTGCAGGAAAGAATCTTATATCTTCACAGTTaGGTCTGTCACTGCTTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SIQHRTVSLLGPILQERILYLHS*VCHCLV Trigger: AACTAAGCAGTGACAGACTCAACTGTGAAGATATAA...GATTCTTTCCTGCAAAATGGGACCAAGCAAGGATACTGTTCTGTGTTGTATAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139713.2 |
||
| CDS-3UTR CCA 90 bp | TTCTCACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGTTTATTGACAATAATTTaGGCTGTTTTAGGAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FSRDGLWRCIFLYTTQNSLLTII*AVLGRQ Trigger: CTGCCTTCCTAAAACAGCCCAAATTATTGTCAATAA...ACTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGTGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
||
| CDS TCA 90 bp | CCTGCTGCACACTGGATCCGGTGGGAAGGGTTGGAAGGGATGCGCTaGGGGTCAGCTGGGTTTCTTCGGATGACAAAGTTATTTCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PAAHWIRWEGLEGMR*GSAGFLRMTKLFRP Trigger: TGGCCGAAATAACTTTGTCATCCGAAGAAACCCAGCTGACCCTCAGCGCATCCCTTCCAACCCTTCCCACCGGATCCAGTGTGCAGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
||
| CDS CCA 90 bp | CTGGATCCGGTGGGAAGGGTTGGAAGGGATGCGCTGAGGGTCAGCTaGGTTTCTTCGGATGACAAAGTTATTTCGGCCAGTTTGAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: LDPVGRVGRDALRVS*VSSDDKVISASLNF Trigger: GAAGTTCAAACTGGCCGAAATAACTTTGTCATCCGAAGAAACCCAGCTGACCCTCAGCGCATCCCTTCCAACCCTTCCCACCGGATCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
||
| CDS TCA 90 bp | GGGTCAGCTGGGTTTCTTCGGATGACAAAGTTATTTCGGCCAGTTTaGACTTCAGGGCCAGCAACTGCAGTAGCACTGGCCATGAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GSAGFLRMTKLFRPV*TSGPATAVALAMKP Trigger: TGGCTTCATGGCCAGTGCTACTGCAGTTGCTGGCCCTGAAGTTCAAACTGGCCGAAATAACTTTGTCATCCGAAGAAACCCAGCTGACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
||
| CDS TCA 90 bp | AAGGGTTGGAAGGGATGCGCTGAGGGTCAGCTGGGTTTCTTCGGATaGCAAAGTTATTTCGGCCAGTTTGAACTTCAGGGCCAGCAACTG | + |
|
Preference number: 5 (lower is better) Translates to: KGWKGCAEGQLGFFG*QSYFGQFELQGQQL Trigger: CAGTTGCTGGCCCTGAAGTTCAAACTGGCCGAAATAACTTTGTCATCCGAAGAAACCCAGCTGACCCTCAGCGCATCCCTTCCAACCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
||
| CDS GCA 90 bp | ATCAATATCTTGGCACACATTATGCTCACTCTGTTCATAGCCTGCTaGACACTGGATCCGGTGGGAAGGGTTGGAAGGGATGCGCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: INILAHIMLTLFIAC*TLDPVGRVGRDALR Trigger: CCTCAGCGCATCCCTTCCAACCCTTCCCACCGGATCCAGTGTGCAGCAGGCTATGAACAGAGTGAGCATAATGTGTGCCAAGATATTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
||
| CDS GCA 90 bp | CTCATCAATATCTTGGCACACATTATGCTCACTCTGTTCATAGCCTaGTGCACACTGGATCCGGTGGGAAGGGTTGGAAGGGATGCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LINILAHIMLTLFIA*CTLDPVGRVGRDAL Trigger: CAGCGCATCCCTTCCAACCCTTCCCACCGGATCCAGTGTGCAGCAGGCTATGAACAGAGTGAGCATAATGTGTGCCAAGATATTGATGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
||
| CDS-3UTR CAA 90 bp | TTCTCACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGTGCACCACACCACTGGTaGCCATGCTCCTGGCAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: FSRDGLWRCIFLYTTQNSAPHHW*PCSWQL Trigger: TAGCTGCCAGGAGCATGGCAACCAGTGGTGTGGTGC...ACTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGTGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
||
| CDS GCA 90 bp | TTACACTGCTGTCTTATGGGGTCCCATTCATATCCATCGGTGCATTaGGTGTATGTGATGGTTTCCTCGGTGTACTGTGACTTGACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LHCCLMGSHSYPSVH*VYVMVSSVYCDLTS Trigger: GCTGGTCAAGTCACAGTACACCGAGGAAACCATCACATACACGCAATGCACCGATGGATATGAATGGGACCCCATAAGACAGCAGTGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS-3UTR CAA 90 bp | ACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGTATCCTTCGGTGTACTGTGACTaGACCAGCGCCAGAGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TGWSVEVYISLYNTEQYPSVYCD*TSARVS Trigger: GCTGACTCTGGCGCTGGTCAAGTCACAGTACACCGA...AGGATACTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
||
| CDS TCA 90 bp | CCAGTGGTGGCACCTGACGAAGCTTCTGCAGCTGGTGTTTCTTGCTaGGGATGCTCATTATTGACAATAATTTGGGCTGTTTTAGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PVVAPDEASAAGVSC*GCSLLTIIWAVLGR Trigger: CCTTCCTAAAACAGCCCAAATTATTGTCAATAATGAGCATCCTCAGCAAGAAACACCAGCTGCAGAAGCTTCGTCAGGTGCCACCACTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS CCA 90 bp | CCCCATGGTAATTCCAGCACATCTCATCTTCTCGGCATTCATTGGTaGTCTCACATTCATTTATATCCTGACAGGTTCTGCTGCGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: PHGNSSTSHLLGIHW*SHIHLYPDRFCCAP Trigger: TGGTGCGCAGCAGAACCTGTCAGGATATAAATGAATGTGAGACCACCAATGAATGCCGAGAAGATGAGATGTGCTGGAATTACCATGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS CCA 90 bp | AGCCCCCATGGTAATTCCAGCACATCTCATCTTCTCGGCATTCATTaGTGGTCTCACATTCATTTATATCCTGACAGGTTCTGCTGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: SPHGNSSTSHLLGIH*WSHIHLYPDRFCCA Trigger: TGCGCAGCAGAACCTGTCAGGATATAAATGAATGTGAGACCACCAATGAATGCCGAGAAGATGAGATGTGCTGGAATTACCATGGGGGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
||
| CDS CCA 90 bp | GCAGTAGAAGGAACCAGGTGTGTTAACACATCTTTGGTGGCAATATaGAGGCACTGTGCATTCATCTATATCCACACACTGTTCACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: AVEGTRCVNTSLVAI*RHCAFIYIHTLFTS Trigger: CGAGGTGAACAGTGTGTGGATATAGATGAATGCACAGTGCCTCCATATTGCCACCAAAGATGTGTTAACACACCTGGTTCCTTCTACTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS TCA 90 bp | CTTCGTAACCCTGTGGGCACATACATGAGAACTTCCCAGGTTCATTaGCACATTGATATTGGCATAGGTAGCTTGAGGTTCTGCATTCGT | + |
|
Preference number: 5 (lower is better) Translates to: LRNPVGTYMRTSQVH*HIDIGIGSLRFCIR Trigger: ACGAATGCAGAACCTCAAGCTACCTATGCCAATATCAATGTGTCAATGAACCTGGGAAGTTCTCATGTATGTGCCCACAGGGTTACGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS-3UTR CAA 90 bp | ATTCTCACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGCACAAGTGTAGTTGTTaGCTGCCAGCTGAAACCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ILTGWSVEVYISLYNTEQHKCSC*LPAETL Trigger: CAGGGTTTCAGCTGGCAGCAAACAACTACACTTGTG...CTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGTGAGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS GCA 90 bp | TTGCAAGCATCTGGGACAATGTCACATTCATCAATATCTTTACACTaGTGTCTTATGGGGTCCCATTCATATCCATCGGTGCATTGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: LQASGTMSHSSISLH*CLMGSHSYPSVHCV Trigger: CACGCAATGCACCGATGGATATGAATGGGACCCCATAAGACAGCAGTGTAAAGATATTGATGAATGTGACATTGTCCCAGATGCTTGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS-3UTR CAA 90 bp | TCTATACAACACAGAACAGTATCCTTGCTTGGTCCCATTTTGCAGGAAAGAATCGTTATTTCGGCCAGTTaGAACTTCAGGGCCAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SIQHRTVSLLGPILQERIVISAS*NFRASN Trigger: GTTGCTGGCCCTGAAGTTCAAACTGGCCGAAATAAC...GATTCTTTCCTGCAAAATGGGACCAAGCAAGGATACTGTTCTGTGTTGTATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
||
| CDS-3UTR CAA 90 bp | TTCTCACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGTAATGTTGTAGCATTGTaGAGCACACTGGTTGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: FSRDGLWRCIFLYTTQNSNVVAL*STLVAG Trigger: GCCAGCAACCAGTGTGCTCAACAATGCTACAACATT...ACTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGTGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020759.12 ENSMUST00000139713.2 |
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| CDS-3UTR CAA 90 bp | ACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGTATCCTATTGGCATAGGTAGCTaGAGGTTCTGCATTCGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: TGWSVEVYISLYNTEQYPIGIGS*RFCIRR Trigger: TCGACGAATGCAGAACCTCAAGCTACCTATGCCAAT...AGGATACTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
||
| CDS TCA 90 bp | AAGGAACCTCGTAAATTGATGCATACTTGGTCCGTTCTACAATTGTaGGTCCCTGAGGTGCACTCATCAATATCTTGGCACACATTATGC | + |
|
Preference number: 5 (lower is better) Translates to: KEPRKLMHTWSVLQL*VPEVHSSISWHTLC Trigger: GCATAATGTGTGCCAAGATATTGATGAGTGCACCTCAGGGACTCACAATTGTAGAACGGACCAAGTATGCATCAATTTACGAGGTTCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
||
| CDS TCA 90 bp | AATGGTGTTTGCATAAATCATTGTTGCCTGTATCTGGAAGATGTCTaGAGGCACGGACCTGTCAGATCGGATGCTCATGTATTTGTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: NGVCINHCCLYLEDV*RHGPVRSDAHVFVD Trigger: GTCTACAAATACATGAGCATCCGATCTGACAGGTCCGTGCCTTCAGACATCTTCCAGATACAGGCAACAATGATTTATGCAAACACCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020759.12 ENSMUST00000139713.2 |
||
| CDS-3UTR CAA 90 bp | ACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGTATCCTTGCAGCTGGTGTTTCTaGCTGAGGATGCTCATTATT | + |
|
Preference number: 5 (lower is better) Translates to: TGWSVEVYISLYNTEQYPCSWCF*LRMLII Trigger: AATAATGAGCATCCTCAGCAAGAAACACCAGCTGCA...AGGATACTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
||
| CDS-3UTR CAA 90 bp | TCTATACAACACAGAACAGTATCCTTGCTTGGTCCCATTTTGCAGGAAAGAATCAATGTTGTAGCATTGTaGAGCACACTGGTTGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SIQHRTVSLLGPILQERINVVAL*STLVAG Trigger: GCCAGCAACCAGTGTGCTCAACAATGCTACAACATT...GATTCTTTCCTGCAAAATGGGACCAAGCAAGGATACTGTTCTGTGTTGTATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020759.12 ENSMUST00000139713.2 |
||
| CDS-3UTR CAA 90 bp | CTCTATACAACACAGAACAGTATCCTTGCTTGGTCCCATTTTGCAGGAAAGAATTGTGTTAACACATCTTaGGTGGCAATATGGAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LYTTQNSILAWSHFAGKNCVNTS*VAIWRH Trigger: GTGCCTCCATATTGCCACCAAAGATGTGTTAACACA...ATTCTTTCCTGCAAAATGGGACCAAGCAAGGATACTGTTCTGTGTTGTATAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
||
| CDS-3UTR CAA 90 bp | ATTCTCACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGTCTTCTCGGCATTCATaGGTGGTCTCACATTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: ILTGWSVEVYISLYNTEQSSRHS*VVSHSF Trigger: AAATGAATGTGAGACCACCAATGAATGCCGAGAAGA...CTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGTGAGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020759.12 ENSMUST00000139713.2 |
||
| CDS-3UTR CAA 90 bp | TCTATACAACACAGAACAGTATCCTTGCTTGGTCCCATTTTGCAGGAAAGAATCGCACTCATCAATATCTaGGCACACATTATGCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: SIQHRTVSLLGPILQERIALINI*AHIMLT Trigger: AGTGAGCATAATGTGTGCCAAGATATTGATGAGTGC...GATTCTTTCCTGCAAAATGGGACCAAGCAAGGATACTGTTCTGTGTTGTATAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
||
| CDS-3UTR CAA 90 bp | CTCTATACAACACAGAACAGTATCCTTGCTTGGTCCCATTTTGCAGGAAAGAATAAGAATGTTGTAGCATaGTTGAGCACACTGGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LYTTQNSILAWSHFAGKNKNVVA*LSTLVA Trigger: AGCAACCAGTGTGCTCAACAATGCTACAACATTCTT...ATTCTTTCCTGCAAAATGGGACCAAGCAAGGATACTGTTCTGTGTTGTATAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020759.12 ENSMUST00000139713.2 |
||
| CDS-3UTR CAA 90 bp | TCTATACAACACAGAACAGTATCCTTGCTTGGTCCCATTTTGCAGGAAAGAATCTCTTCTCGGCATTCATaGGTGGTCTCACATTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: SIQHRTVSLLGPILQERISSRHS*VVSHSF Trigger: AAATGAATGTGAGACCACCAATGAATGCCGAGAAGA...GATTCTTTCCTGCAAAATGGGACCAAGCAAGGATACTGTTCTGTGTTGTATAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020759.12 ENSMUST00000139713.2 |
||
| CDS CCA 90 bp | TCCTCCATAGTGGTTGACACATTTCATTCCACCTTTGCAAGCATCTaGGACAATGTCACATTCATCAATATCTTTACACTGCTGTCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: SSIVVDTFHSTFASI*DNVTFINIFTLLSY Trigger: ATAAGACAGCAGTGTAAAGATATTGATGAATGTGACATTGTCCCAGATGCTTGCAAAGGTGGAATGAAATGTGTCAACCACTATGGAGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
||
| CDS-3UTR CAA 90 bp | TTCTCACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGTTTGCATAAATCATTGTaGCCTGTATCTGGAAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: FSRDGLWRCIFLYTTQNSLHKSL*PVSGRC Trigger: ACATCTTCCAGATACAGGCAACAATGATTTATGCAA...ACTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGTGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020759.12 ENSMUST00000139713.2 |
||
| CDS-3UTR CAA 90 bp | ACGGGATGGTCTGTGGAGGTGTATATTTCTCTATACAACACAGAACAGTATCCTTGTTTGCATAAATCATaGTTGCCTGTATCTGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: TGWSVEVYISLYNTEQYPCLHKS*LPVSGR Trigger: TCTTCCAGATACAGGCAACAATGATTTATGCAAACA...AGGATACTGTTCTGTGTTGTATAGAGAAATATACACCTCCACAGACCATCCCGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020759.12 ENSMUST00000139713.2 |
||
| CDS-3UTR CAA 90 bp | CTCTATACAACACAGAACAGTATCCTTGCTTGGTCCCATTTTGCAGGAAAGAATTTGCATAAATCATTGTaGCCTGTATCTGGAAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: LYTTQNSILAWSHFAGKNLHKSL*PVSGRC Trigger: ACATCTTCCAGATACAGGCAACAATGATTTATGCAA...ATTCTTTCCTGCAAAATGGGACCAAGCAAGGATACTGTTCTGTGTTGTATAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020759.12 ENSMUST00000139713.2 |
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| CDS-3UTR CAA 90 bp | CTCTATACAACACAGAACAGTATCCTTGCTTGGTCCCATTTTGCAGGAAAGAATTGTTTGCATAAATCATaGTTGCCTGTATCTGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: LYTTQNSILAWSHFAGKNCLHKS*LPVSGR Trigger: TCTTCCAGATACAGGCAACAATGATTTATGCAAACA...ATTCTTTCCTGCAAAATGGGACCAAGCAAGGATACTGTTCTGTGTTGTATAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020759.12 ENSMUST00000139713.2 |
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| CDS CCA 72 bp | CATAGCCTGCTGCACACTGGATCCGGTGGGAAGGGTTaGAAGGGATGCGCTGAGGGTCAGCTGGGTTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: HSLLHTGSGGKG*KGCAEGQLGFF Trigger: GAAGAAACCCAGCTGACCCTCAGCGCATCCCTTCCAACCCTTCCCACCGGATCCAGTGTGCAGCAGGCTATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS GCA 72 bp | GTTATTTCGGCCAGTTTGAACTTCAGGGCCAGCAACTaGAGTAGCACTGGCCATGAAGCCACCCCCAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: VISASLNFRASN*SSTGHEATPRH Trigger: GTGCCTGGGGGTGGCTTCATGGCCAGTGCTACTGCAGTTGCTGGCCCTGAAGTTCAAACTGGCCGAAATAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS TCA 72 bp | CACTGGATCCGGTGGGAAGGGTTGGAAGGGATGCGCTaGGGGTCAGCTGGGTTTCTTCGGATGACAAAGTTA | + |
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Preference number: 6 (lower is better) Translates to: HWIRWEGLEGMR*GSAGFLRMTKL Trigger: TAACTTTGTCATCCGAAGAAACCCAGCTGACCCTCAGCGCATCCCTTCCAACCCTTCCCACCGGATCCAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS CCA 72 bp | GTGGGAAGGGTTGGAAGGGATGCGCTGAGGGTCAGCTaGGTTTCTTCGGATGACAAAGTTATTTCGGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: VGRVGRDALRVS*VSSDDKVISAS Trigger: ACTGGCCGAAATAACTTTGTCATCCGAAGAAACCCAGCTGACCCTCAGCGCATCCCTTCCAACCCTTCCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS GCA 72 bp | TTGGCACACATTATGCTCACTCTGTTCATAGCCTGCTaGACACTGGATCCGGTGGGAAGGGTTGGAAGGGAT | + |
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Preference number: 6 (lower is better) Translates to: LAHIMLTLFIAC*TLDPVGRVGRD Trigger: ATCCCTTCCAACCCTTCCCACCGGATCCAGTGTGCAGCAGGCTATGAACAGAGTGAGCATAATGTGTGCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS GCA 72 bp | ATCTTGGCACACATTATGCTCACTCTGTTCATAGCCTaGTGCACACTGGATCCGGTGGGAAGGGTTGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: ILAHIMLTLFIA*CTLDPVGRVGR Trigger: CCTTCCAACCCTTCCCACCGGATCCAGTGTGCAGCAGGCTATGAACAGAGTGAGCATAATGTGTGCCAAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS CAA 90 bp | AGGGTCAGCTGGGTTTCTTCGGATGACAAAGTTATTTCGGCCAGTTaGAACTTCAGGGCCAGCAACTGCAGTAGCACTGGCCATGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: RVSWVSSDDKVISAS*NFRASNCSSTGHEA Trigger: GGCTTCATGGCCAGTGCTACTGCAGTTGCTGGCCCTGAAGTTCAAACTGGCCGAAATAACTTTGTCATCCGAAGAAACCCAGCTGACCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS TCA 72 bp | GGGTTTCTTCGGATGACAAAGTTATTTCGGCCAGTTTaGACTTCAGGGCCAGCAACTGCAGTAGCACTGGCC | + |
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Preference number: 6 (lower is better) Translates to: GFLRMTKLFRPV*TSGPATAVALA Trigger: GGCCAGTGCTACTGCAGTTGCTGGCCCTGAAGTTCAAACTGGCCGAAATAACTTTGTCATCCGAAGAAACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS TCA 72 bp | AAGGGATGCGCTGAGGGTCAGCTGGGTTTCTTCGGATaGCAAAGTTATTTCGGCCAGTTTGAACTTCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: KGCAEGQLGFFG*QSYFGQFELQG Trigger: GCCCTGAAGTTCAAACTGGCCGAAATAACTTTGTCATCCGAAGAAACCCAGCTGACCCTCAGCGCATCCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS GCA 72 bp | GGAAGATGTCTGAAGGCACGGACCTGTCAGATCGGATaGTCATGTATTTGTAGACAATGGACTGGGGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: GRCLKARTCQIG*SCICRQWTGAA Trigger: AGCTGCCCCAGTCCATTGTCTACAAATACATGAGCATCCGATCTGACAGGTCCGTGCCTTCAGACATCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020759.12 ENSMUST00000139713.2 |
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| CDS GCA 72 bp | TGGTGGTCTCACATTCATTTATATCCTGACAGGTTCTaGTGCGCACCACTTCGTAACCCTGTGGGCACATAC | + |
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Preference number: 6 (lower is better) Translates to: WWSHIHLYPDRF*CAPLRNPVGTY Trigger: GTATGTGCCCACAGGGTTACGAAGTGGTGCGCAGCAGAACCTGTCAGGATATAAATGAATGTGAGACCACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS CAA 72 bp | TGGGTTTCTTCGGATGACAAAGTTATTTCGGCCAGTTaGAACTTCAGGGCCAGCAACTGCAGTAGCACTGGC | + |
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Preference number: 6 (lower is better) Translates to: WVSSDDKVISAS*NFRASNCSSTG Trigger: GCCAGTGCTACTGCAGTTGCTGGCCCTGAAGTTCAAACTGGCCGAAATAACTTTGTCATCCGAAGAAACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS CAA 90 bp | TCGGTGCATTGCGTGTATGTGATGGTTTCCTCGGTGTACTGTGACTaGACCAGCGCCAGAGTCAGCATAGTTAGGAAAAGTGTTTGCAAC | + |
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Preference number: 6 (lower is better) Translates to: SVHCVYVMVSSVYCD*TSARVSIVRKSVCN Trigger: GTTGCAAACACTTTTCCTAACTATGCTGACTCTGGCGCTGGTCAAGTCACAGTACACCGAGGAAACCATCACATACACGCAATGCACCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS TCA 72 bp | GCTGCGCACCACTTCGTAACCCTGTGGGCACATACATaGGAACTTCCCAGGTTCATTGACACATTGATATTG | + |
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Preference number: 6 (lower is better) Translates to: AAHHFVTLWAHT*ELPRFIDTLIL Trigger: CAATATCAATGTGTCAATGAACCTGGGAAGTTCTCATGTATGTGCCCACAGGGTTACGAAGTGGTGCGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS GCA 72 bp | TGTCTTATGGGGTCCCATTCATATCCATCGGTGCATTaGGTGTATGTGATGGTTTCCTCGGTGTACTGTGAC | + |
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Preference number: 6 (lower is better) Translates to: CLMGSHSYPSVH*VYVMVSSVYCD Trigger: GTCACAGTACACCGAGGAAACCATCACATACACGCAATGCACCGATGGATATGAATGGGACCCCATAAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS GCA 72 bp | TGGTCTCACATTCATTTATATCCTGACAGGTTCTGCTaGGCACCACTTCGTAACCCTGTGGGCACATACATG | + |
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Preference number: 6 (lower is better) Translates to: WSHIHLYPDRFC*APLRNPVGTYM Trigger: CATGTATGTGCCCACAGGGTTACGAAGTGGTGCGCAGCAGAACCTGTCAGGATATAAATGAATGTGAGACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS CAA 72 bp | TGCGTGTATGTGATGGTTTCCTCGGTGTACTGTGACTaGACCAGCGCCAGAGTCAGCATAGTTAGGAAAAGT | + |
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Preference number: 6 (lower is better) Translates to: CVYVMVSSVYCD*TSARVSIVRKS Trigger: ACTTTTCCTAACTATGCTGACTCTGGCGCTGGTCAAGTCACAGTACACCGAGGAAACCATCACATACACGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS CAA 72 bp | CTCTTGGTCCTGATAGAGACTTCACAAGCACCAGCATaGCACTCACAGGGCTTGTTTGTCGTAGGTAGAACT | + |
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Preference number: 6 (lower is better) Translates to: LLVLIETSQAPA*HSQGLFVVGRT Trigger: AGTTCTACCTACGACAAACAAGCCCTGTGAGTGCAATGCTGGTGCTTGTGAAGTCTCTATCAGGACCAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020759.12 ENSMUST00000139713.2 |
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| CDS CAA 90 bp | CGATGTATTCTCTTGGTCCTGATAGAGACTTCACAAGCACCAGCATaGCACTCACAGGGCTTGTTTGTCGTAGGTAGAACTCTCCATTTT | + |
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Preference number: 6 (lower is better) Translates to: RCILLVLIETSQAPA*HSQGLFVVGRTLHF Trigger: AAAATGGAGAGTTCTACCTACGACAAACAAGCCCTGTGAGTGCAATGCTGGTGCTTGTGAAGTCTCTATCAGGACCAAGAGAATACATCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020759.12 ENSMUST00000139713.2 |
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| CDS TCA 72 bp | CCTGTGGGCACATACATGAGAACTTCCCAGGTTCATTaGCACATTGATATTGGCATAGGTAGCTTGAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: PVGTYMRTSQVH*HIDIGIGSLRF Trigger: GAACCTCAAGCTACCTATGCCAATATCAATGTGTCAATGAACCTGGGAAGTTCTCATGTATGTGCCCACAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS TCA 72 bp | TGCATAAATCATTGTTGCCTGTATCTGGAAGATGTCTaGAGGCACGGACCTGTCAGATCGGATGCTCATGTA | + |
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Preference number: 6 (lower is better) Translates to: CINHCCLYLEDV*RHGPVRSDAHV Trigger: TACATGAGCATCCGATCTGACAGGTCCGTGCCTTCAGACATCTTCCAGATACAGGCAACAATGATTTATGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020759.12 ENSMUST00000139713.2 |
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| CDS CCA 72 bp | GGAACCAGGTGTGTTAACACATCTTTGGTGGCAATATaGAGGCACTGTGCATTCATCTATATCCACACACTG | + |
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Preference number: 6 (lower is better) Translates to: GTRCVNTSLVAI*RHCAFIYIHTL Trigger: CAGTGTGTGGATATAGATGAATGCACAGTGCCTCCATATTGCCACCAAAGATGTGTTAACACACCTGGTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS CAA 72 bp | CTGGCAGTAGAAGGAACCAGGTGTGTTAACACATCTTaGGTGGCAATATGGAGGCACTGTGCATTCATCTAT | + |
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Preference number: 6 (lower is better) Translates to: LAVEGTRCVNTS*VAIWRHCAFIY Trigger: ATAGATGAATGCACAGTGCCTCCATATTGCCACCAAAGATGTGTTAACACACCTGGTTCCTTCTACTGCCAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS TCA 72 bp | GATGCATACTTGGTCCGTTCTACAATTGTGAGTCCCTaGGGTGCACTCATCAATATCTTGGCACACATTATG | + |
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Preference number: 6 (lower is better) Translates to: DAYLVRSTIVSP*GALINILAHIM Trigger: CATAATGTGTGCCAAGATATTGATGAGTGCACCTCAGGGACTCACAATTGTAGAACGGACCAAGTATGCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS TCA 72 bp | CGTAAATTGATGCATACTTGGTCCGTTCTACAATTGTaGGTCCCTGAGGTGCACTCATCAATATCTTGGCAC | + |
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Preference number: 6 (lower is better) Translates to: RKLMHTWSVLQL*VPEVHSSISWH Trigger: GTGCCAAGATATTGATGAGTGCACCTCAGGGACTCACAATTGTAGAACGGACCAAGTATGCATCAATTTACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS GCA 72 bp | ATACTTGGTCCGTTCTACAATTGTGAGTCCCTGAGGTaGACTCATCAATATCTTGGCACACATTATGCTCAC | + |
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Preference number: 6 (lower is better) Translates to: ILGPFYNCESLR*THQYLGTHYAH Trigger: GTGAGCATAATGTGTGCCAAGATATTGATGAGTGCACCTCAGGGACTCACAATTGTAGAACGGACCAAGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS CAA 90 bp | TGCAGCTGGTGTTTCTTGCTGAGGATGCTCATTATTGACAATAATTaGGGCTGTTTTAGGAAGGCAGAGATATCCTCCATAGTGGTTGAC | + |
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Preference number: 6 (lower is better) Translates to: CSWCFLLRMLIIDNN*GCFRKAEISSIVVD Trigger: GTCAACCACTATGGAGGATATCTCTGCCTTCCTAAAACAGCCCAAATTATTGTCAATAATGAGCATCCTCAGCAAGAAACACCAGCTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS GCA 72 bp | TCTGGGACAATGTCACATTCATCAATATCTTTACACTaGTGTCTTATGGGGTCCCATTCATATCCATCGGTG | + |
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Preference number: 6 (lower is better) Translates to: SGTMSHSSISLH*CLMGSHSYPSV Trigger: CACCGATGGATATGAATGGGACCCCATAAGACAGCAGTGTAAAGATATTGATGAATGTGACATTGTCCCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS CCA 72 bp | TGTCACATTCATCAATATCTTTACACTGCTGTCTTATaGGGTCCCATTCATATCCATCGGTGCATTGCGTGT | + |
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Preference number: 6 (lower is better) Translates to: CHIHQYLYTAVL*GPIHIHRCIAC Trigger: ACACGCAATGCACCGATGGATATGAATGGGACCCCATAAGACAGCAGTGTAAAGATATTGATGAATGTGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS CCA 72 bp | AATTCCAGCACATCTCATCTTCTCGGCATTCATTGGTaGTCTCACATTCATTTATATCCTGACAGGTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: NSSTSHLLGIHW*SHIHLYPDRFC Trigger: GCAGAACCTGTCAGGATATAAATGAATGTGAGACCACCAATGAATGCCGAGAAGATGAGATGTGCTGGAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS CCA 72 bp | GGTAATTCCAGCACATCTCATCTTCTCGGCATTCATTaGTGGTCTCACATTCATTTATATCCTGACAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: GNSSTSHLLGIH*WSHIHLYPDRF Trigger: GAACCTGTCAGGATATAAATGAATGTGAGACCACCAATGAATGCCGAGAAGATGAGATGTGCTGGAATTACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020759.12 |
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| CDS TCA 72 bp | CACTGCTTAGTTCATATCCTTGATTACACTGACAGATaGATGAGCCAAGAATGTTGTAGCATTGTTGAGCAC | + |
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Preference number: 6 (lower is better) Translates to: HCLVHILDYTDR*MSQECCSIVEH Trigger: GTGCTCAACAATGCTACAACATTCTTGGCTCATTCATCTGTCAGTGTAATCAAGGATATGAACTAAGCAGTG 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020759.12 ENSMUST00000139713.2 |
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