Pregenerated sensors for EFCC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068263Ensembl transcript IDs: ENSMUST00000032132.9, ENSMUST00000159570.9
Found 151 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCCTGGGTTTACTTAGCAGGCATGCTGGTGGAAGAGGACAGCGCTaGGGGGCGGTGCGTGGAGATCTCAGGACTCTCGGGCAGAGATTC | + |
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Preference number: 1 (lower is better) Translates to: GLGLLSRHAGGRGQR*GAVRGDLRTLGQRF Trigger: GAATCTCTGCCCGAGAGTCCTGAGATCTCCACGCACCGCCCCCCAGCGCTGTCCTCTTCCACCAGCATGCCTGCTAAGTAAACCCAGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| 3UTR TCA 90 bp | CTGTTCCTAGTTGCAACACTGCCTCAGAGGTGGGGAGTTCCCCAGTaGTTAGATGTGTCCTGGAGGCTGGGCCTGGGTTTACTTAGCAGG | + |
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Preference number: 1 (lower is better) Translates to: LFLVATLPQRWGVPQ*LDVSWRLGLGLLSR Trigger: CCTGCTAAGTAAACCCAGGCCCAGCCTCCAGGACACATCTAATCACTGGGGAACTCCCCACCTCTGAGGCAGTGTTGCAACTAGGAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| 3UTR TCA 90 bp | CTTCGGAAGAGCAGTCTGGAAGAGCAGTCAGGTGCTCTTACCCATTaGGCCATCTCACTAGCCCTTATCAGGCCTTTCTTGAGCAGACCA | + |
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Preference number: 1 (lower is better) Translates to: LRKSSLEEQSGALTH*AISLALIRPFLSRP Trigger: TGGTCTGCTCAAGAAAGGCCTGATAAGGGCTAGTGAGATGGCTCAATGGGTAAGAGCACCTGACTGCTCTTCCAGACTGCTCTTCCGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032132.9 |
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| 3UTR CCA 90 bp | ACAGCCCAGCTTCCACCCACAAGCCTACAGACATCATTTTCTCCTTaGAACACTCTGCTGTTCCTAGTTGCAACACTGCCTCAGAGGTGG | + |
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Preference number: 1 (lower is better) Translates to: TAQLPPTSLQTSFSP*NTLLFLVATLPQRW Trigger: CCACCTCTGAGGCAGTGTTGCAACTAGGAACAGCAGAGTGTTCCAAGGAGAAAATGATGTCTGTAGGCTTGTGGGTGGAAGCTGGGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032132.9 |
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| 3UTR TCA 90 bp | GGGCAGAGATTCTGGAATGTACTGTGTGCTGTGCCCAGGATGAGATaGCAGCCTCAGGTTCAGGCTGATCTAGCAACTTCAGGCTTTCAA | + |
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Preference number: 1 (lower is better) Translates to: GQRFWNVLCAVPRMR*QPQVQADLATSGFQ Trigger: TTGAAAGCCTGAAGTTGCTAGATCAGCCTGAACCTGAGGCTGTCATCTCATCCTGGGCACAGCACACAGTACATTCCAGAATCTCTGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| 3UTR GCA 90 bp | AAGAAAGGGGTCGCTGCCAGACCCAGTTTTGGAAGAAGCCTTGGCTaGCTGAGTTCTGAGGGAATGACAAGTGTCAGATCATTTGTGGAG | + |
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Preference number: 1 (lower is better) Translates to: KKGVAARPSFGRSLG*LSSEGMTSVRSFVE Trigger: CTCCACAAATGATCTGACACTTGTCATTCCCTCAGAACTCAGGCAGCCAAGGCTTCTTCCAAAACTGGGTCTGGCAGCGACCCCTTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| 3UTR TCA 90 bp | ATCTTGTTACTGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCTGGACCTTCGGAAGAGCAGTCTGGAAGAGCAGTCAGGT | + |
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Preference number: 1 (lower is better) Translates to: ILLLMVVSHHVVAGI*TLDLRKSSLEEQSG Trigger: ACCTGACTGCTCTTCCAGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCAGTAACAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032132.9 |
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| 3UTR CCA 90 bp | GAGTCAGATCTTGTTACTGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCTGGAAGAGCA | + |
|
Preference number: 1 (lower is better) Translates to: ESDLVTDGCEPPCGC*DLNSGPSEEQSGRA Trigger: TGCTCTTCCAGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCAGTAACAAGATCTGACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032132.9 |
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| 3UTR TCA 90 bp | TTCTCTCTGTGCCTACTTACATTCCACCTCTCCTTTTGGATGAGGTaGCAGCCCAGCTTCCACCCACAAGCCTACAGACATCATTTTCTC | + |
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Preference number: 1 (lower is better) Translates to: FSLCLLTFHLSFWMR*QPSFHPQAYRHHFL Trigger: GAGAAAATGATGTCTGTAGGCTTGTGGGTGGAAGCTGGGCTGTCACCTCATCCAAAAGGAGAGGTGGAATGTAAGTAGGCACAGAGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032132.9 |
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| 3UTR CAA 90 bp | AGCAGACCAAATAGCACAGGTCAGTCGGCTGGGGCAAGCAGGGCCTaGTGGGCTCAGGCTGAGCAGGAAAGATCAAAAGGAGGCAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: SRPNSTGQSAGASRA*WAQAEQERSKGGSP Trigger: GGGGCTGCCTCCTTTTGATCTTTCCTGCTCAGCCTGAGCCCACAAGGCCCTGCTTGCCCCAGCCGACTGACCTGTGCTATTTGGTCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032132.9 |
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| 3UTR-3UTR TCA 90 bp | GACCAAATAGCACAGGTCAGTCGGCTGGGGCAAGCAGGGCCTTGTGGGCTCAGGTGGGGAGTTCCCCAGTaGTTAGATGTGTCCTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: DQIAQVSRLGQAGPCGLRWGVPQ*LDVSWR Trigger: CCTCCAGGACACATCTAATCACTGGGGAACTCCCCA...CCTGAGCCCACAAGGCCCTGCTTGCCCCAGCCGACTGACCTGTGCTATTTGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032132.9 |
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| 3UTR-3UTR TCA 90 bp | GAGGTGGGGAGTTCCCCAGTGATTAGATGTGTCCTGGAGGCTGGGCCTGGGTTTTCAATGTGGAGGCTCTaGGAGAATGTGAGAGGCCCA | + |
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Preference number: 2 (lower is better) Translates to: EVGSSPVIRCVLEAGPGFSMWRL*ENVRGP Trigger: TGGGCCTCTCACATTCTCTCAGAGCCTCCACATTGA...AAACCCAGGCCCAGCCTCCAGGACACATCTAATCACTGGGGAACTCCCCACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| 3UTR-3UTR TCA 90 bp | AGGACTCTCGGGCAGAGATTCTGGAATGTACTGTGTGCTGTGCCCAGGATGAGAGGCTCTGAGAGAATGTaGGAGGCCCAAGAAAGGGGT | + |
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Preference number: 2 (lower is better) Translates to: RTLGQRFWNVLCAVPRMRGSERM*EAQERG Trigger: ACCCCTTTCTTGGGCCTCTCACATTCTCTCAGAGCC...TCTCATCCTGGGCACAGCACACAGTACATTCCAGAATCTCTGCCCGAGAGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| 3UTR-3UTR GCA 90 bp | GCTCTGAGAGAATGTGAGAGGCCCAAGAAAGGGGTCGCTGCCAGACCCAGTTTTGGAAGAAGCCTTGGCTaGCTGAGTTCTGAGGGAATG | + |
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Preference number: 2 (lower is better) Translates to: ALRECERPKKGVAARPSFGRSLG*LSSEGM Trigger: CATTCCCTCAGAACTCAGGCAGCCAAGGCTTCTTCC...AAAACTGGGTCTGGCAGCGACCCCTTTCTTGGGCCTCTCACATTCTCTCAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| 3UTR-3UTR CCA 90 bp | GCGGTGCGTGGAGATCTCAGGACTCTCGGGCAGAGATTCTGGAATGTACTGTGTTGCCAGACCCAGTTTTaGAAGAAGCCTTGGCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: AVRGDLRTLGQRFWNVLCCQTQF*KKPWLP Trigger: AGGCAGCCAAGGCTTCTTCCAAAACTGGGTCTGGCA...ACACAGTACATTCCAGAATCTCTGCCCGAGAGTCCTGAGATCTCCACGCACCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| 3UTR CAA 90 bp | CTAGTGCTAGTCCCATTGGTAGTCAGGTTGATCATGGAGGCTAGCTaGTCTGGTTGTGGTCAGGCTGGTCTGATGACGGCGAGAATGACC | + |
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Preference number: 2 (lower is better) Translates to: LVLVPLVVRLIMEAS*SGCGQAGLMTARMT Trigger: GGTCATTCTCGCCGTCATCAGACCAGCCTGACCACAACCAGACAAGCTAGCCTCCATGATCAACCTGACTACCAATGGGACTAGCACTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| 3UTR-3UTR TCA 90 bp | AGGACTCTCGGGCAGAGATTCTGGAATGTACTGTGTGCTGTGCCCAGGATGAGATCAATGTGGAGGCTCTaGGAGAATGTGAGAGGCCCA | + |
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Preference number: 2 (lower is better) Translates to: RTLGQRFWNVLCAVPRMRSMWRL*ENVRGP Trigger: TGGGCCTCTCACATTCTCTCAGAGCCTCCACATTGA...TCTCATCCTGGGCACAGCACACAGTACATTCCAGAATCTCTGCCCGAGAGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| 3UTR CAA 90 bp | GACAGCCCAGCTTCCACCCACAAGCCTACAGACATCATTTTCTCCTaGGAACACTCTGCTGTTCCTAGTTGCAACACTGCCTCAGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: DSPASTHKPTDIIFS*EHSAVPSCNTASEV Trigger: CACCTCTGAGGCAGTGTTGCAACTAGGAACAGCAGAGTGTTCCAAGGAGAAAATGATGTCTGTAGGCTTGTGGGTGGAAGCTGGGCTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032132.9 |
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| 3UTR-3UTR TCA 90 bp | AAGAGGGAGTCAGATCTTGTTACTGATGGTTGTGAGCCACCATGTGGTTGCTGGGGCTCTGAGAGAATGTaGGAGGCCCAAGAAAGGGGT | + |
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Preference number: 2 (lower is better) Translates to: KRESDLVTDGCEPPCGCWGSERM*EAQERG Trigger: ACCCCTTTCTTGGGCCTCTCACATTCTCTCAGAGCC...CCAGCAACCACATGGTGGCTCACAACCATCAGTAACAAGATCTGACTCCCTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032132.9 |
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| 3UTR-3UTR GCA 90 bp | AGAGCAGTCAGGTGCTCTTACCCATTGAGCCATCTCACTAGCCCTTATCAGGCCTCTGCTGTTCCTAGTTaGAACACTGCCTCAGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: RAVRCSYPLSHLTSPYQASAVPS*NTASEV Trigger: CACCTCTGAGGCAGTGTTGCAACTAGGAACAGCAGA...GGCCTGATAAGGGCTAGTGAGATGGCTCAATGGGTAAGAGCACCTGACTGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032132.9 |
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| 3UTR-3UTR CCA 90 bp | CGTGGAGATCTCAGGACTCTCGGGCAGAGATTCTGGAATGTACTGTGTGCTGTGAGAGTGTTCAGATGGTaGAAGACAGTCCAGCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: RGDLRTLGQRFWNVLCAVRVFRW*KTVQQW Trigger: CCACTGCTGGACTGTCTTCCACCATCTGAACACTCT...CACAGCACACAGTACATTCCAGAATCTCTGCCCGAGAGTCCTGAGATCTCCACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| 3UTR CAA 90 bp | GATCTTGTTACTGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCTGGACCTTCGGAAGAGCAGTCTGGAAGAGCAGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: DLVTDGCEPPCGCWD*NSGPSEEQSGRAVR Trigger: CCTGACTGCTCTTCCAGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCAGTAACAAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032132.9 |
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| 3UTR-3UTR CCA 90 bp | CCCACCTTTGATCTGGTTGTAACTTTTCTCTCTGTGCCTACTTACATTCCACCTAGAGTGTTCAGATGGTaGAAGACAGTCCAGCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: PTFDLVVTFLSVPTYIPPRVFRW*KTVQQW Trigger: CCACTGCTGGACTGTCTTCCACCATCTGAACACTCT...AGGTGGAATGTAAGTAGGCACAGAGAGAAAAGTTACAACCAGATCAAAGGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032132.9 |
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| 3UTR-3UTR CAA 90 bp | GGGGGCGGTGCGTGGAGATCTCAGGACTCTCGGGCAGAGATTCTGGAATGTACTCTGCCAGACCCAGTTTaGGAAGAAGCCTTGGCTGCC | + |
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Preference number: 3 (lower is better) Translates to: GGGAWRSQDSRAEILECTLPDPV*EEALAA Trigger: GGCAGCCAAGGCTTCTTCCAAAACTGGGTCTGGCAG...AGTACATTCCAGAATCTCTGCCCGAGAGTCCTGAGATCTCCACGCACCGCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| 3UTR-3UTR CAA 90 bp | AAGAGGGAGTCAGATCTTGTTACTGATGGTTGTGAGCCACCATGTGGTTGCTGGGGGGCAAGCAGGGCCTaGTGGGCTCAGGCTGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: KRESDLVTDGCEPPCGCWGASRA*WAQAEQ Trigger: CTGCTCAGCCTGAGCCCACAAGGCCCTGCTTGCCCC...CCAGCAACCACATGGTGGCTCACAACCATCAGTAACAAGATCTGACTCCCTCTT 58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000032132.9 |
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| 3UTR GCA 72 bp | AGGCTGAGCAGGAAAGATCAAAAGGAGGCAGCCCCCTaGTTTAGACCTGCCTGTTTGGTGCCTGGCCTTGGG | + |
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Preference number: 3 (lower is better) Translates to: RLSRKDQKEAAP*FRPACLVPGLG Trigger: CCCAAGGCCAGGCACCAAACAGGCAGGTCTAAAGCAGGGGGCTGCCTCCTTTTGATCTTTCCTGCTCAGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032132.9 |
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| 3UTR TCA 72 bp | GTTGCAACACTGCCTCAGAGGTGGGGAGTTCCCCAGTaGTTAGATGTGTCCTGGAGGCTGGGCCTGGGTTTA | + |
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Preference number: 3 (lower is better) Translates to: VATLPQRWGVPQ*LDVSWRLGLGL Trigger: TAAACCCAGGCCCAGCCTCCAGGACACATCTAATCACTGGGGAACTCCCCACCTCTGAGGCAGTGTTGCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| 3UTR-3UTR CAA 90 bp | TGGAGATCTCAGGACTCTCGGGCAGAGATTCTGGAATGTACTGTGTGCTGTGCCCTGCCAGACCCAGTTTaGGAAGAAGCCTTGGCTGCC | + |
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Preference number: 3 (lower is better) Translates to: WRSQDSRAEILECTVCCALPDPV*EEALAA Trigger: GGCAGCCAAGGCTTCTTCCAAAACTGGGTCTGGCAG...GGCACAGCACACAGTACATTCCAGAATCTCTGCCCGAGAGTCCTGAGATCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| 3UTR TCA 72 bp | ACTTCAGGCTTTCAATGTGGAGGCTCTGAGAGAATGTaGGAGGCCCAAGAAAGGGGTCGCTGCCAGACCCAG | + |
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Preference number: 3 (lower is better) Translates to: TSGFQCGGSERM*EAQERGRCQTQ Trigger: CTGGGTCTGGCAGCGACCCCTTTCTTGGGCCTCTCACATTCTCTCAGAGCCTCCACATTGAAAGCCTGAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| 3UTR GCA 72 bp | CAGGACTCTCGGGCAGAGATTCTGGAATGTACTGTGTaGTGTGCCCAGGATGAGATGACAGCCTCAGGTTCA | + |
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Preference number: 3 (lower is better) Translates to: QDSRAEILECTV*CAQDEMTASGS Trigger: TGAACCTGAGGCTGTCATCTCATCCTGGGCACAGCACACAGTACATTCCAGAATCTCTGCCCGAGAGTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| 3UTR TCA 72 bp | TGTGCCCAGGATGAGATGACAGCCTCAGGTTCAGGCTaGTCTAGCAACTTCAGGCTTTCAATGTGGAGGCTC | + |
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Preference number: 3 (lower is better) Translates to: CAQDEMTASGSG*SSNFRLSMWRL Trigger: GAGCCTCCACATTGAAAGCCTGAAGTTGCTAGATCAGCCTGAACCTGAGGCTGTCATCTCATCCTGGGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| 3UTR TCA 72 bp | CTCTGTGCCTACTTACATTCCACCTCTCCTTTTGGATaGGGTGACAGCCCAGCTTCCACCCACAAGCCTACA | + |
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Preference number: 3 (lower is better) Translates to: LCAYLHSTSPFG*GDSPASTHKPT Trigger: TGTAGGCTTGTGGGTGGAAGCTGGGCTGTCACCTCATCCAAAAGGAGAGGTGGAATGTAAGTAGGCACAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032132.9 |
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| 3UTR TCA 72 bp | CTGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCTGGACCTTCGGAAGAGCAGTCTGGAAGAG | + |
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Preference number: 3 (lower is better) Translates to: LMVVSHHVVAGI*TLDLRKSSLEE Trigger: CTCTTCCAGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032132.9 |
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| 3UTR GCA 72 bp | GTCGCTGCCAGACCCAGTTTTGGAAGAAGCCTTGGCTaGCTGAGTTCTGAGGGAATGACAAGTGTCAGATCA | + |
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Preference number: 3 (lower is better) Translates to: VAARPSFGRSLG*LSSEGMTSVRS Trigger: TGATCTGACACTTGTCATTCCCTCAGAACTCAGGCAGCCAAGGCTTCTTCCAAAACTGGGTCTGGCAGCGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| 3UTR GCA 72 bp | GATCTTGTTACTGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCTGGACCTTCGGAAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: DLVTDGCEPPCG*WDLNSGPSEEQ Trigger: CTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCAGTAACAAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032132.9 |
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| 3UTR CCA 72 bp | CTTGTTACTGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCT | + |
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Preference number: 3 (lower is better) Translates to: LVTDGCEPPCGC*DLNSGPSEEQS Trigger: AGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCAGTAACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032132.9 |
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| 3UTR-3UTR CAA 90 bp | CCCACCTTTGATCTGGTTGTAACTTTTCTCTCTGTGCCTACTTACATTCCACCTCCATTGGTAGTCAGGTaGATCATGGAGGCTAGCTTG | + |
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Preference number: 3 (lower is better) Translates to: PTFDLVVTFLSVPTYIPPPLVVR*IMEASL Trigger: CAAGCTAGCCTCCATGATCAACCTGACTACCAATGG...AGGTGGAATGTAAGTAGGCACAGAGAGAAAAGTTACAACCAGATCAAAGGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032132.9 |
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| CDS-3UTR GCA 90 bp | GAGGTGGGGAGTTCCCCAGTGATTAGATGTGTCCTGGAGGCTGGGCCTGGGTTTGCACTCGGTGCAAGCTaGGTCGCACCGCCTGCCGAG | + |
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Preference number: 4 (lower is better) Translates to: EVGSSPVIRCVLEAGPGFALGAS*VAPPAE Trigger: CTCGGCAGGCGGTGCGACGCAGCTTGCACCGAGTGC...AAACCCAGGCCCAGCCTCCAGGACACATCTAATCACTGGGGAACTCCCCACCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS-3UTR CCA 90 bp | GACCAAATAGCACAGGTCAGTCGGCTGGGGCAAGCAGGGCCTTGTGGGCTCAGGAGGCGCGCGTGGAACTaGCGGAAGGTGAGCTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: DQIAQVSRLGQAGPCGLRRRAWN*RKVSSG Trigger: TCCAGAGCTCACCTTCCGCCAGTTCCACGCGCGCCT...CCTGAGCCCACAAGGCCCTGCTTGCCCCAGCCGACTGACCTGTGCTATTTGGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032132.9 |
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| CDS-3UTR TCA 90 bp | GGTCAGTCGGCTGGGGCAAGCAGGGCCTTGTGGGCTCAGGCTGAGCAGGAAAGAACCTCCTGCAGATACTaGTCCAGACCGGTAGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: GQSAGASRALWAQAEQERTSCRY*SRPVAS Trigger: GCTGGCTACCGGTCTGGATCAGTATCTGCAGGAGGT...TCTTTCCTGCTCAGCCTGAGCCCACAAGGCCCTGCTTGCCCCAGCCGACTGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032132.9 |
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| CDS-3UTR CCA 90 bp | GATGTGTCCTGGAGGCTGGGCCTGGGTTTACTTAGCAGGCATGCTGGTGGAAGACGCAGGTCGCCGGTATaGGTCACCCGCCGAGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: DVSWRLGLGLLSRHAGGRRRSPV*VTRRAL Trigger: GAGAGCTCGGCGGGTGACCCATACCGGCGACCTGCG...TCTTCCACCAGCATGCCTGCTAAGTAAACCCAGGCCCAGCCTCCAGGACACATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS-3UTR CCA 90 bp | GATGTGTCCTGGAGGCTGGGCCTGGGTTTACTTAGCAGGCATGCTGGTGGAAGACCGCAGAGGCGCGCGTaGAACTGGCGGAAGGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: DVSWRLGLGLLSRHAGGRPQRRA*NWRKVS Trigger: GCTCACCTTCCGCCAGTTCCACGCGCGCCTCTGCGG...TCTTCCACCAGCATGCCTGCTAAGTAAACCCAGGCCCAGCCTCCAGGACACATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS-3UTR TCA 90 bp | GAGATCTCAGGACTCTCGGGCAGAGATTCTGGAATGTACTGTGTGCTGTGCCCAGCACTCAGCAGCCACTaGGTGCGCCGCGCAGGTCGC | + |
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Preference number: 4 (lower is better) Translates to: EISGLSGRDSGMYCVLCPALSSH*VRRAGR Trigger: GCGACCTGCGCGGCGCACTCAGTGGCTGCTGAGTGC...TGGGCACAGCACACAGTACATTCCAGAATCTCTGCCCGAGAGTCCTGAGATCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS-3UTR GCA 90 bp | GCTCTGAGAGAATGTGAGAGGCCCAAGAAAGGGGTCGCTGCCAGACCCAGTTTTTCAGCAGCCACTGAGTaGGCCGCGCAGGTCGCCGGT | + |
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Preference number: 4 (lower is better) Translates to: ALRECERPKKGVAARPSFSAATE*AAQVAG Trigger: ACCGGCGACCTGCGCGGCGCACTCAGTGGCTGCTGA...AAAACTGGGTCTGGCAGCGACCCCTTTCTTGGGCCTCTCACATTCTCTCAGAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS-3UTR GCA 90 bp | GACCAAATAGCACAGGTCAGTCGGCTGGGGCAAGCAGGGCCTTGTGGGCTCAGGACACAGCCTGAGGGTTaGACCAGGGGTACCTCACCA | + |
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Preference number: 4 (lower is better) Translates to: DQIAQVSRLGQAGPCGLRTQPEG*TRGTSP Trigger: TGGTGAGGTACCCCTGGTGCAACCCTCAGGCTGTGT...CCTGAGCCCACAAGGCCCTGCTTGCCCCAGCCGACTGACCTGTGCTATTTGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032132.9 |
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| CDS-3UTR TCA 90 bp | GAGGTGGGGAGTTCCCCAGTGATTAGATGTGTCCTGGAGGCTGGGCCTGGGTTTTGTGTCTCTGCTGTCTaGCCGCTGGACTCCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EVGSSPVIRCVLEAGPGFCVSAV*PLDSLW Trigger: CCAGAGGGAGTCCAGCGGTCAGACAGCAGAGACACA...AAACCCAGGCCCAGCCTCCAGGACACATCTAATCACTGGGGAACTCCCCACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS-3UTR TCA 90 bp | TGGCCACGGACCATGGAGGCTGGACTGGTAGTCAGGATAACCATGGTGGCTGGTCCTACTCACACAGCCTaGGGGTTGCACCAGGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: WPRTMEAGLVVRITMVAGPTHTA*GLHQGY Trigger: GTACCCCTGGTGCAACCCTCAGGCTGTGTGAGTAGG...ACCAGCCACCATGGTTATCCTGACTACCAGTCCAGCCTCCATGGTCCGTGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS-3UTR GCA 90 bp | GAGATCTCAGGACTCTCGGGCAGAGATTCTGGAATGTACTGTGTGCTGTGCCCATCAGCAGCCACTGAGTaGGCCGCGCAGGTCGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: EISGLSGRDSGMYCVLCPSAATE*AAQVAG Trigger: ACCGGCGACCTGCGCGGCGCACTCAGTGGCTGCTGA...TGGGCACAGCACACAGTACATTCCAGAATCTCTGCCCGAGAGTCCTGAGATCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS-3UTR GCA 90 bp | GGTCAGTCGGCTGGGGCAAGCAGGGCCTTGTGGGCTCAGGCTGAGCAGGAAAGAAGCTCTAGCCTCAGATaGTCAGCTTCCACCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GQSAGASRALWAQAEQERSSSLR*SASTIC Trigger: GCAGATGGTGGAAGCTGAGCATCTGAGGCTAGAGCT...TCTTTCCTGCTCAGCCTGAGCCCACAAGGCCCTGCTTGCCCCAGCCGACTGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032132.9 |
||
| CDS-3UTR GCA 90 bp | AGGCTGGGCCTGGGTTTACTTAGCAGGCATGCTGGTGGAAGAGGACAGCGCTGGCCAGGATGGCCAAGGTaGCACATGTACCCTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RLGLGLLSRHAGGRGQRWPGWPR*HMYPPV Trigger: CACAGGAGGGTACATGTGGCACCTTGGCCATCCTGG...CCAGCGCTGTCCTCTTCCACCAGCATGCCTGCTAAGTAAACCCAGGCCCAGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS-3UTR GCA 90 bp | CCTGGAGGCTGGGCCTGGGTTTACTTAGCAGGCATGCTGGTGGAAGAGGACAGCCCAGGATGGCCAAGGTaGCACATGTACCCTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PGGWAWVYLAGMLVEEDSPGWPR*HMYPPV Trigger: CACAGGAGGGTACATGTGGCACCTTGGCCATCCTGG...GCTGTCCTCTTCCACCAGCATGCCTGCTAAGTAAACCCAGGCCCAGCCTCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS-3UTR CCA 90 bp | TGGAGATCTCAGGACTCTCGGGCAGAGATTCTGGAATGTACTGTGTGCTGTGCCCGCAGGTCGCCGGTATaGGTCACCCGCCGAGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: WRSQDSRAEILECTVCCARRSPV*VTRRAL Trigger: GAGAGCTCGGCGGGTGACCCATACCGGCGACCTGCG...GGCACAGCACACAGTACATTCCAGAATCTCTGCCCGAGAGTCCTGAGATCTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS-3UTR CCA 90 bp | AGGTTGATCATGGAGGCTAGCTTGTCTGGTTGTGGTCAGGCTGGTCTGATGACGCCGCAGAGGCGCGCGTaGAACTGGCGGAAGGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RLIMEASLSGCGQAGLMTPQRRA*NWRKVS Trigger: GCTCACCTTCCGCCAGTTCCACGCGCGCCTCTGCGG...CGTCATCAGACCAGCCTGACCACAACCAGACAAGCTAGCCTCCATGATCAACCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS-3UTR CCA 90 bp | GGTCAGTCGGCTGGGGCAAGCAGGGCCTTGTGGGCTCAGGCTGAGCAGGAAAGAGCCATTCCTGTTTCCTaGCCTTGGACTGGCTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GQSAGASRALWAQAEQERAIPVS*PWTGLL Trigger: CAACAAGCCAGTCCAAGGCCAGGAAACAGGAATGGC...TCTTTCCTGCTCAGCCTGAGCCCACAAGGCCCTGCTTGCCCCAGCCGACTGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032132.9 |
||
| CDS-3UTR CCA 90 bp | GCGGTGCGTGGAGATCTCAGGACTCTCGGGCAGAGATTCTGGAATGTACTGTGTTCCTCAGAGGCGGCCTaGCCTTCCACGGAGCGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: AVRGDLRTLGQRFWNVLCSSEAA*PSTERN Trigger: GTTCCGCTCCGTGGAAGGCCAGGCCGCCTCTGAGGA...ACACAGTACATTCCAGAATCTCTGCCCGAGAGTCCTGAGATCTCCACGCACCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS-3UTR GCA 90 bp | GGGGGCGGTGCGTGGAGATCTCAGGACTCTCGGGCAGAGATTCTGGAATGTACTACACAGCCTGAGGGTTaGACCAGGGGTACCTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: GGGAWRSQDSRAEILECTTQPEG*TRGTSP Trigger: TGGTGAGGTACCCCTGGTGCAACCCTCAGGCTGTGT...AGTACATTCCAGAATCTCTGCCCGAGAGTCCTGAGATCTCCACGCACCGCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS-3UTR GCA 90 bp | GAGGCTCTGAGAGAATGTGAGAGGCCCAAGAAAGGGGTCGCTGCCAGACCCAGTGAAGGGGTTCGTGTGTaGAGGAGCTGTGGATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EALRECERPKKGVAARPSEGVRV*RSCGCW Trigger: CCAGCATCCACAGCTCCTGCACACACGAACCCCTTC...ACTGGGTCTGGCAGCGACCCCTTTCTTGGGCCTCTCACATTCTCTCAGAGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS-3UTR CCA 90 bp | TGGAGATCTCAGGACTCTCGGGCAGAGATTCTGGAATGTACTGTGTGCTGTGCCGCGGAAGGTGAGCTCTaGAGGGTCGGCTCGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WRSQDSRAEILECTVCCAAEGEL*RVGSQS Trigger: GCTCTGCGAGCCGACCCTCCAGAGCTCACCTTCCGC...GGCACAGCACACAGTACATTCCAGAATCTCTGCCCGAGAGTCCTGAGATCTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS-3UTR CCA 90 bp | GATCTCAGGACTCTCGGGCAGAGATTCTGGAATGTACTGTGTGCTGTGCCCAGGTCCAGTCGCTGCACCTaGCGCTGCAAGCAGGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: DLRTLGQRFWNVLCAVPRSSRCT*RCKQGT Trigger: TGTCCCCTGCTTGCAGCGCCAGGTGCAGCGACTGGA...CCTGGGCACAGCACACAGTACATTCCAGAATCTCTGCCCGAGAGTCCTGAGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS-3UTR CCA 90 bp | CCTGGAGGCTGGGCCTGGGTTTACTTAGCAGGCATGCTGGTGGAAGAGGACAGCCCTGTTTCCTGGCCTTaGACTGGCTTGTTGGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PGGWAWVYLAGMLVEEDSPVSWP*TGLLGC Trigger: ACACCCCAACAAGCCAGTCCAAGGCCAGGAAACAGG...GCTGTCCTCTTCCACCAGCATGCCTGCTAAGTAAACCCAGGCCCAGCCTCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS-3UTR CCA 90 bp | GAGGTGGGGAGTTCCCCAGTGATTAGATGTGTCCTGGAGGCTGGGCCTGGGTTTCTGCTGTCTGACCGCTaGACTCCCTCTGGAGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EVGSSPVIRCVLEAGPGFLLSDR*TPSGVV Trigger: CACTACTCCAGAGGGAGTCCAGCGGTCAGACAGCAG...AAACCCAGGCCCAGCCTCCAGGACACATCTAATCACTGGGGAACTCCCCACCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS-3UTR CCA 90 bp | CTCCTTTTGGATGAGGTGACAGCCCAGCTTCCACCCACAAGCCTACAGACATCATCCTCAGAGGCGGCCTaGCCTTCCACGGAGCGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LLLDEVTAQLPPTSLQTSSSEAA*PSTERN Trigger: GTTCCGCTCCGTGGAAGGCCAGGCCGCCTCTGAGGA...TGATGTCTGTAGGCTTGTGGGTGGAAGCTGGGCTGTCACCTCATCCAAAAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032132.9 |
||
| CDS-3UTR CCA 90 bp | GCGGTGCGTGGAGATCTCAGGACTCTCGGGCAGAGATTCTGGAATGTACTGTGTGGCCTGTGGGCGCCCTaGCTTTTCCTGCCACCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: AVRGDLRTLGQRFWNVLCGLWAP*LFLPPF Trigger: GAAAGGTGGCAGGAAAAGCCAGGGCGCCCACAGGCC...ACACAGTACATTCCAGAATCTCTGCCCGAGAGTCCTGAGATCTCCACGCACCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS-3UTR CCA 90 bp | TGGCCACGGACCATGGAGGCTGGACTGGTAGTCAGGATAACCATGGTGGCTGGTTGTGTGCAGGAGCTGTaGATGCTGGTGCCGAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: WPRTMEAGLVVRITMVAGCVQEL*MLVPRD Trigger: ATCCCTCGGCACCAGCATCCACAGCTCCTGCACACA...ACCAGCCACCATGGTTATCCTGACTACCAGTCCAGCCTCCATGGTCCGTGGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS-3UTR CCA 90 bp | GGGGGCGGTGCGTGGAGATCTCAGGACTCTCGGGCAGAGATTCTGGAATGTACTTGTGTGCAGGAGCTGTaGATGCTGGTGCCGAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GGGAWRSQDSRAEILECTCVQEL*MLVPRD Trigger: ATCCCTCGGCACCAGCATCCACAGCTCCTGCACACA...AGTACATTCCAGAATCTCTGCCCGAGAGTCCTGAGATCTCCACGCACCGCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS-3UTR TCA 90 bp | GCGGTGCGTGGAGATCTCAGGACTCTCGGGCAGAGATTCTGGAATGTACTGTGTCCTACTCACACAGCCTaGGGGTTGCACCAGGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: AVRGDLRTLGQRFWNVLCPTHTA*GLHQGY Trigger: GTACCCCTGGTGCAACCCTCAGGCTGTGTGAGTAGG...ACACAGTACATTCCAGAATCTCTGCCCGAGAGTCCTGAGATCTCCACGCACCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS-3UTR TCA 90 bp | TTCTTGAGCAGACCAAATAGCACAGGTCAGTCGGCTGGGGCAAGCAGGGCCTTGGGCCAAAGGAAGCCTTaGGCGTCTCAGCTGTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FLSRPNSTGQSAGASRALGQRKP*ASQLSG Trigger: ACCAGACAGCTGAGACGCTCAAGGCTTCCTTTGGCC...CAAGGCCCTGCTTGCCCCAGCCGACTGACCTGTGCTATTTGGTCTGCTCAAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032132.9 |
||
| CDS-3UTR GCA 90 bp | AGGCTGGGCCTGGGTTTACTTAGCAGGCATGCTGGTGGAAGAGGACAGCGCTGGTCAGCTTCCACCATCTaGTGTAGTTCTGCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RLGLGLLSRHAGGRGQRWSASTI*CSSASS Trigger: GGAGGAGGCAGAACTACAGCAGATGGTGGAAGCTGA...CCAGCGCTGTCCTCTTCCACCAGCATGCCTGCTAAGTAAACCCAGGCCCAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS-3UTR CCA 90 bp | GAGATCTCAGGACTCTCGGGCAGAGATTCTGGAATGTACTGTGTGCTGTGCCCAAGGCGCGCGTGGAACTaGCGGAAGGTGAGCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: EISGLSGRDSGMYCVLCPRRAWN*RKVSSG Trigger: TCCAGAGCTCACCTTCCGCCAGTTCCACGCGCGCCT...TGGGCACAGCACACAGTACATTCCAGAATCTCTGCCCGAGAGTCCTGAGATCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS-3UTR CCA 90 bp | TGGAGATCTCAGGACTCTCGGGCAGAGATTCTGGAATGTACTGTGTGCTGTGCCTCCAGTCGCTGCACCTaGCGCTGCAAGCAGGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: WRSQDSRAEILECTVCCASSRCT*RCKQGT Trigger: TGTCCCCTGCTTGCAGCGCCAGGTGCAGCGACTGGA...GGCACAGCACACAGTACATTCCAGAATCTCTGCCCGAGAGTCCTGAGATCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS-3UTR CCA 90 bp | CTCCTTTTGGATGAGGTGACAGCCCAGCTTCCACCCACAAGCCTACAGACATCAGGCCTGTGGGCGCCCTaGCTTTTCCTGCCACCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLLDEVTAQLPPTSLQTSGLWAP*LFLPPF Trigger: GAAAGGTGGCAGGAAAAGCCAGGGCGCCCACAGGCC...TGATGTCTGTAGGCTTGTGGGTGGAAGCTGGGCTGTCACCTCATCCAAAAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032132.9 |
||
| CDS-3UTR CCA 90 bp | AGGCTGGGCCTGGGTTTACTTAGCAGGCATGCTGGTGGAAGAGGACAGCGCTGGTCAGCACCATCACAGTaGCCAAAGGAAGCCTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RLGLGLLSRHAGGRGQRWSAPSQ*PKEALS Trigger: GCTCAAGGCTTCCTTTGGCCACTGTGATGGTGCTGA...CCAGCGCTGTCCTCTTCCACCAGCATGCCTGCTAAGTAAACCCAGGCCCAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS-3UTR CCA 90 bp | CAGCAGTGGCCACGGACCATGGAGGCTGGACTGGTAGTCAGGATAACCATGGTGGCAAGGTGTCCAGGATaGCCAAGGTGCCACATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QQWPRTMEAGLVVRITMVARCPG*PRCHMY Trigger: GTACATGTGGCACCTTGGCCATCCTGGACACCTTGC...CACCATGGTTATCCTGACTACCAGTCCAGCCTCCATGGTCCGTGGCCACTGCTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS-3UTR CCA 90 bp | GAGGCTCTGAGAGAATGTGAGAGGCCCAAGAAAGGGGTCGCTGCCAGACCCAGTGCAAGGTGTCCAGGATaGCCAAGGTGCCACATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: EALRECERPKKGVAARPSARCPG*PRCHMY Trigger: GTACATGTGGCACCTTGGCCATCCTGGACACCTTGC...ACTGGGTCTGGCAGCGACCCCTTTCTTGGGCCTCTCACATTCTCTCAGAGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS-3UTR CCA 90 bp | CCTGGAGGCTGGGCCTGGGTTTACTTAGCAGGCATGCTGGTGGAAGAGGACAGCCAGCCAACCAAAGCTTaGTGCAAGGTGTCCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: PGGWAWVYLAGMLVEEDSQPTKA*CKVSRM Trigger: CATCCTGGACACCTTGCACCAAGCTTTGGTTGGCTG...GCTGTCCTCTTCCACCAGCATGCCTGCTAAGTAAACCCAGGCCCAGCCTCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS-3UTR CCA 90 bp | TGGCCACGGACCATGGAGGCTGGACTGGTAGTCAGGATAACCATGGTGGCTGGTAGGAGCTGTGGATGCTaGTGCCGAGGGATTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WPRTMEAGLVVRITMVAGRSCGC*CRGISL Trigger: CAGAGAAATCCCTCGGCACCAGCATCCACAGCTCCT...ACCAGCCACCATGGTTATCCTGACTACCAGTCCAGCCTCCATGGTCCGTGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS-3UTR CCA 90 bp | CAGCAGTGGCCACGGACCATGGAGGCTGGACTGGTAGTCAGGATAACCATGGTGAGGAGCTGTGGATGCTaGTGCCGAGGGATTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QQWPRTMEAGLVVRITMVRSCGC*CRGISL Trigger: CAGAGAAATCCCTCGGCACCAGCATCCACAGCTCCT...CACCATGGTTATCCTGACTACCAGTCCAGCCTCCATGGTCCGTGGCCACTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS-3UTR TCA 90 bp | GCTCTGAGAGAATGTGAGAGGCCCAAGAAAGGGGTCGCTGCCAGACCCAGTTTTACCTCCTGCAGATACTaGTCCAGACCGGTAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALRECERPKKGVAARPSFTSCRY*SRPVAS Trigger: GCTGGCTACCGGTCTGGATCAGTATCTGCAGGAGGT...AAAACTGGGTCTGGCAGCGACCCCTTTCTTGGGCCTCTCACATTCTCTCAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS-3UTR TCA 90 bp | AGGTTGATCATGGAGGCTAGCTTGTCTGGTTGTGGTCAGGCTGGTCTGATGACGTGTGTCTCTGCTGTCTaGCCGCTGGACTCCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RLIMEASLSGCGQAGLMTCVSAV*PLDSLW Trigger: CCAGAGGGAGTCCAGCGGTCAGACAGCAGAGACACA...CGTCATCAGACCAGCCTGACCACAACCAGACAAGCTAGCCTCCATGATCAACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS-3UTR GCA 90 bp | GGGGGCGGTGCGTGGAGATCTCAGGACTCTCGGGCAGAGATTCTGGAATGTACTAGCTCTAGCCTCAGATaGTCAGCTTCCACCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GGGAWRSQDSRAEILECTSSSLR*SASTIC Trigger: GCAGATGGTGGAAGCTGAGCATCTGAGGCTAGAGCT...AGTACATTCCAGAATCTCTGCCCGAGAGTCCTGAGATCTCCACGCACCGCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS-3UTR GCA 90 bp | TGGCCACGGACCATGGAGGCTGGACTGGTAGTCAGGATAACCATGGTGGCTGGTTCTGTCTCCACCATCTaGAGCTCTAGCCTCAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: WPRTMEAGLVVRITMVAGSVSTI*SSSLRC Trigger: GCATCTGAGGCTAGAGCTGCAGATGGTGGAGACAGA...ACCAGCCACCATGGTTATCCTGACTACCAGTCCAGCCTCCATGGTCCGTGGCCA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS-3UTR GCA 90 bp | GATGTGTCCTGGAGGCTGGGCCTGGGTTTACTTAGCAGGCATGCTGGTGGAAGAAGGTCCCGGAGCCTTTaGAGGAGTTGTAGCACATCC | + |
|
Preference number: 4 (lower is better) Translates to: DVSWRLGLGLLSRHAGGRRSRSL*RSCSTS Trigger: GGATGTGCTACAACTCCTGCAAAGGCTCCGGGACCT...TCTTCCACCAGCATGCCTGCTAAGTAAACCCAGGCCCAGCCTCCAGGACACATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS-3UTR GCA 90 bp | AGTCCAGCAGTGGCCACGGACCATGGAGGCTGGACTGGTAGTCAGGATAACCATTGCAGGAGCTGTGGATaGTGGTGCCGAGGGATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPAVATDHGGWTGSQDNHCRSCG*WCRGIS Trigger: AGAAATCCCTCGGCACCAGCATCCACAGCTCCTGCA...ATGGTTATCCTGACTACCAGTCCAGCCTCCATGGTCCGTGGCCACTGCTGGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS-3UTR TCA 90 bp | GAGATCTCAGGACTCTCGGGCAGAGATTCTGGAATGTACTGTGTGCTGTGCCCAGGCCAAAGGAAGCCTTaGGCGTCTCAGCTGTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: EISGLSGRDSGMYCVLCPGQRKP*ASQLSG Trigger: ACCAGACAGCTGAGACGCTCAAGGCTTCCTTTGGCC...TGGGCACAGCACACAGTACATTCCAGAATCTCTGCCCGAGAGTCCTGAGATCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS-3UTR TCA 90 bp | CTGAGAGAATGTGAGAGGCCCAAGAAAGGGGTCGCTGCCAGACCCAGTTTTGGACCCCAGGGCTCTTTTTaGTATGTTCAGGTCCCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LRECERPKKGVAARPSFGPQGSF*YVQVPE Trigger: CTCCGGGACCTGAACATATCAAAAAGAGCCCTGGGG...TCCAAAACTGGGTCTGGCAGCGACCCCTTTCTTGGGCCTCTCACATTCTCTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS-3UTR CCA 90 bp | CTGAGAGAATGTGAGAGGCCCAAGAAAGGGGTCGCTGCCAGACCCAGTTTTGGACCTGTTTCCTGGCCTTaGACTGGCTTGTTGGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LRECERPKKGVAARPSFGPVSWP*TGLLGC Trigger: ACACCCCAACAAGCCAGTCCAAGGCCAGGAAACAGG...TCCAAAACTGGGTCTGGCAGCGACCCCTTTCTTGGGCCTCTCACATTCTCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS-3UTR CCA 90 bp | AGTCCAGCAGTGGCCACGGACCATGGAGGCTGGACTGGTAGTCAGGATAACCATGCCATTCCTGTTTCCTaGCCTTGGACTGGCTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPAVATDHGGWTGSQDNHAIPVS*PWTGLL Trigger: CAACAAGCCAGTCCAAGGCCAGGAAACAGGAATGGC...ATGGTTATCCTGACTACCAGTCCAGCCTCCATGGTCCGTGGCCACTGCTGGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS-3UTR CCA 90 bp | AGGTTGATCATGGAGGCTAGCTTGTCTGGTTGTGGTCAGGCTGGTCTGATGACGCTGCTGTCTGACCGCTaGACTCCCTCTGGAGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RLIMEASLSGCGQAGLMTLLSDR*TPSGVV Trigger: CACTACTCCAGAGGGAGTCCAGCGGTCAGACAGCAG...CGTCATCAGACCAGCCTGACCACAACCAGACAAGCTAGCCTCCATGATCAACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| 3UTR CAA 72 bp | GTCCCATTGGTAGTCAGGTTGATCATGGAGGCTAGCTaGTCTGGTTGTGGTCAGGCTGGTCTGATGACGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VPLVVRLIMEAS*SGCGQAGLMTA Trigger: CGCCGTCATCAGACCAGCCTGACCACAACCAGACAAGCTAGCCTCCATGATCAACCTGACTACCAATGGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS-3UTR TCA 90 bp | GAGATCTCAGGACTCTCGGGCAGAGATTCTGGAATGTACTGTGTGCTGTGCCCACCCCAGGGCTCTTTTTaGTATGTTCAGGTCCCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: EISGLSGRDSGMYCVLCPPQGSF*YVQVPE Trigger: CTCCGGGACCTGAACATATCAAAAAGAGCCCTGGGG...TGGGCACAGCACACAGTACATTCCAGAATCTCTGCCCGAGAGTCCTGAGATCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS-3UTR GCA 90 bp | GGAATGACAAGTGTCAGATCATTTGTGGAGAGTGTTCAGATGGTGGAAGACAGTGCACTCGGTGCAAGCTaGGTCGCACCGCCTGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: GMTSVRSFVESVQMVEDSALGAS*VAPPAE Trigger: CTCGGCAGGCGGTGCGACGCAGCTTGCACCGAGTGC...ACTGTCTTCCACCATCTGAACACTCTCCACAAATGATCTGACACTTGTCATTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS-3UTR GCA 90 bp | AGGTTGATCATGGAGGCTAGCTTGTCTGGTTGTGGTCAGGCTGGTCTGATGACGAGGTCCCGGAGCCTTTaGAGGAGTTGTAGCACATCC | + |
|
Preference number: 4 (lower is better) Translates to: RLIMEASLSGCGQAGLMTRSRSL*RSCSTS Trigger: GGATGTGCTACAACTCCTGCAAAGGCTCCGGGACCT...CGTCATCAGACCAGCCTGACCACAACCAGACAAGCTAGCCTCCATGATCAACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS-3UTR GCA 90 bp | GAGATCTCAGGACTCTCGGGCAGAGATTCTGGAATGTACTGTGTGCTGTGCCCATGCAGGAGCTGTGGATaGTGGTGCCGAGGGATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EISGLSGRDSGMYCVLCPCRSCG*WCRGIS Trigger: AGAAATCCCTCGGCACCAGCATCCACAGCTCCTGCA...TGGGCACAGCACACAGTACATTCCAGAATCTCTGCCCGAGAGTCCTGAGATCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| 3UTR CAA 72 bp | TGGTGGCTGGTCCAGCGATGGCTAGTGCTAGTCCCATaGGTAGTCAGGTTGATCATGGAGGCTAGCTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: WWLVQRWLVLVP*VVRLIMEASLS Trigger: AGACAAGCTAGCCTCCATGATCAACCTGACTACCAATGGGACTAGCACTAGCCATCGCTGGACCAGCCACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS-3UTR GCA 90 bp | GCGGTGCGTGGAGATCTCAGGACTCTCGGGCAGAGATTCTGGAATGTACTGTGTCAGCTGCTCATCCTCTaGTTCATCTGTGTCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AVRGDLRTLGQRFWNVLCQLLIL*FICVSA Trigger: AGCAGAGACACAGATGAAGCAGAGGATGAGCAGCTG...ACACAGTACATTCCAGAATCTCTGCCCGAGAGTCCTGAGATCTCCACGCACCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032132.9 |
||
| CDS-3UTR GCA 90 bp | CGTGGAGATCTCAGGACTCTCGGGCAGAGATTCTGGAATGTACTGTGTGCTGTGTCTGTCTCCACCATCTaGAGCTCTAGCCTCAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: RGDLRTLGQRFWNVLCAVSVSTI*SSSLRC Trigger: GCATCTGAGGCTAGAGCTGCAGATGGTGGAGACAGA...CACAGCACACAGTACATTCCAGAATCTCTGCCCGAGAGTCCTGAGATCTCCACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS-3UTR CCA 90 bp | GAGATCTCAGGACTCTCGGGCAGAGATTCTGGAATGTACTGTGTGCTGTGCCCACAGCCAACCAAAGCTTaGTGCAAGGTGTCCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: EISGLSGRDSGMYCVLCPQPTKA*CKVSRM Trigger: CATCCTGGACACCTTGCACCAAGCTTTGGTTGGCTG...TGGGCACAGCACACAGTACATTCCAGAATCTCTGCCCGAGAGTCCTGAGATCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| 3UTR CAA 72 bp | TTTCTCTCTGTGCCTACTTACATTCCACCTCTCCTTTaGGATGAGGTGACAGCCCAGCTTCCACCCACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLSVPTYIPPLL*DEVTAQLPPTS Trigger: GCTTGTGGGTGGAAGCTGGGCTGTCACCTCATCCAAAAGGAGAGGTGGAATGTAAGTAGGCACAGAGAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032132.9 |
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| 3UTR CAA 72 bp | ACTGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCTGGACCTTCGGAAGAGCAGTCTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWD*NSGPSEEQSGR Trigger: TCTTCCAGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032132.9 |
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| 3UTR CAA 72 bp | GCTTCCACCCACAAGCCTACAGACATCATTTTCTCCTaGGAACACTCTGCTGTTCCTAGTTGCAACACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ASTHKPTDIIFS*EHSAVPSCNTA Trigger: GGCAGTGTTGCAACTAGGAACAGCAGAGTGTTCCAAGGAGAAAATGATGTCTGTAGGCTTGTGGGTGGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032132.9 |
||
| CDS-3UTR GCA 90 bp | GGAATGACAAGTGTCAGATCATTTGTGGAGAGTGTTCAGATGGTGGAAGACAGTTCAGCTTCCACCATCTaGTGTAGTTCTGCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GMTSVRSFVESVQMVEDSSASTI*CSSASS Trigger: GGAGGAGGCAGAACTACAGCAGATGGTGGAAGCTGA...ACTGTCTTCCACCATCTGAACACTCTCCACAAATGATCTGACACTTGTCATTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS-3UTR CCA 90 bp | GGAATGACAAGTGTCAGATCATTTGTGGAGAGTGTTCAGATGGTGGAAGACAGTTCAGCACCATCACAGTaGCCAAAGGAAGCCTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GMTSVRSFVESVQMVEDSSAPSQ*PKEALS Trigger: GCTCAAGGCTTCCTTTGGCCACTGTGATGGTGCTGA...ACTGTCTTCCACCATCTGAACACTCTCCACAAATGATCTGACACTTGTCATTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| 3UTR CAA 72 bp | GCTGTTTTCAGATACTCCAGAAGAGGGAGTCAGATCTaGTTACTGATGGTTGTGAGCCACCATGTGGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AVFRYSRRGSQI*LLMVVSHHVVA Trigger: AGCAACCACATGGTGGCTCACAACCATCAGTAACAAGATCTGACTCCCTCTTCTGGAGTATCTGAAAACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032132.9 |
||
| CDS GCA 90 bp | TGCCGAGCCTCCTCGGTGCGCAGCCGCACCTCCACCTGTCCGCGCTaGAGCCGCCGGGCGCGCGCCTCCGCCTCTGCCAGCGCGCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CRASSVRSRTSTCPR*SRRARASASASAPC Trigger: GCAGGGCGCGCTGGCAGAGGCGGAGGCGCGCGCCCGGCGGCTGCAGCGCGGACAGGTGGAGGTGCGGCTGCGCACCGAGGAGGCTCGGCA 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS GCA 90 bp | GGTCCAGCCCGTAGTGGTGAGCCAAGGCACTCAGCAGCCACTGAGTaGGCCGCGCAGGTCGCCGGTATGGGTCACCCGCCGAGCTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GPARSGEPRHSAATE*AAQVAGMGHPPSSP Trigger: TGGAGAGCTCGGCGGGTGACCCATACCGGCGACCTGCGCGGCGCACTCAGTGGCTGCTGAGTGCCTTGGCTCACCACTACGGGCTGGACC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS GCA 90 bp | GATCATCCCAGCAGCCGGGTTCGTGGAGGCCGCCTCCGCGGAGTTTaGGTCCTCCGTGGCCGTCTCCCCGTCAGCGTTCAGCCCCAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: DHPSSRVRGGRLRGV*VLRGRLPVSVQPQY Trigger: GTACTGGGGCTGAACGCTGACGGGGAGACGGCCACGGAGGACGCAAACTCCGCGGAGGCGGCCTCCACGAACCCGGCTGCTGGGATGATC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS TCA 90 bp | GCCGCCGCTTCTGGGATGTCCGACTGGCTTTTCCAGAGGCCGACCTaGAGGGCCAGGCAACGCGCGTCACTGCTCTGCAGCGCAGCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: AAASGMSDWLFQRPT*RARQRASLLCSAAR Trigger: ACGGGCTGCGCTGCAGAGCAGTGACGCGCGTTGCCTGGCCCTTCAGGTCGGCCTCTGGAAAAGCCAGTCGGACATCCCAGAAGCGGCGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS CCA 90 bp | GAAATAGCCGCAGAGGCGCGCGTGGAACTGGCGGAAGGTGAGCTCTaGAGGGTCGGCTCGCAGAGCCAGGCGCGCCTCTTCCCTGACGTC | + |
|
Preference number: 5 (lower is better) Translates to: EIAAEARVELAEGEL*RVGSQSQARLFPDV Trigger: GACGTCAGGGAAGAGGCGCGCCTGGCTCTGCGAGCCGACCCTCCAGAGCTCACCTTCCGCCAGTTCCACGCGCGCCTCTGCGGCTATTTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS GCA 90 bp | ACCAGGGGTACCTCACCATGGGCCTGTGGGCGCCCTGGCTTTTCCTaGCACCTTTCTTCCTCTTCCTCCTCAGAGGCGGCCTGGCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TRGTSPWACGRPGFS*HLSSSSSSEAAWPS Trigger: GGAAGGCCAGGCCGCCTCTGAGGAGGAAGAGGAAGAAAGGTGGCAGGAAAAGCCAGGGCGCCCACAGGCCCATGGTGAGGTACCCCTGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS TCA 90 bp | CTTGAGCGTCTCAGCTGTCTGGTCGTCACACCTACTCACACAGCCTaGGGGTTGCACCAGGGGTACCTCACCATGGGCCTGTGGGCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LERLSCLVVTPTHTA*GLHQGYLTMGLWAP Trigger: GGGCGCCCACAGGCCCATGGTGAGGTACCCCTGGTGCAACCCTCAGGCTGTGTGAGTAGGTGTGACGACCAGACAGCTGAGACGCTCAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS TCA 90 bp | CCCGCTCCCCGGCAGTCCAAGTGGTGGAAAACCTCCTGCAGATACTaGTCCAGACCGGTAGCCAGCACCACGATCTCATTCTCCACGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PAPRQSKWWKTSCRY*SRPVASTTISFSTP Trigger: CGGCGTGGAGAATGAGATCGTGGTGCTGGCTACCGGTCTGGATCAGTATCTGCAGGAGGTTTTCCACCACTTGGACTGCCGGGGAGCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS TCA 90 bp | GTGCAAGGTGTCCAGGATGGCCAAGGTGCCACATGTACCCTCCTGTaGGGGGTTCCGGTCCAGGGCATTCAGCAACATCTTCCCCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VQGVQDGQGATCTLL*GVPVQGIQQHLPQG Trigger: GCCCTGGGGAAGATGTTGCTGAATGCCCTGGACCGGAACCCCTCACAGGAGGGTACATGTGGCACCTTGGCCATCCTGGACACCTTGCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS CCA 90 bp | CACCTACTCACACAGCCTGAGGGTTGCACCAGGGGTACCTCACCATaGGCCTGTGGGCGCCCTGGCTTTTCCTGCCACCTTTCTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HLLTQPEGCTRGTSP*ACGRPGFSCHLSSS Trigger: AGAGGAAGAAAGGTGGCAGGAAAAGCCAGGGCGCCCACAGGCCCATGGTGAGGTACCCCTGGTGCAACCCTCAGGCTGTGTGAGTAGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS GCA 90 bp | TCCACCATCTGCAGCTCTAGCCTCAGATGCTCAGCTTCCACCATCTaGTGTAGTTCTGCCTCCTCCTCCGGTGTCCCCAGGGTCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: STICSSSLRCSASTI*CSSASSSGVPRVCS Trigger: GCTGCAGACCCTGGGGACACCGGAGGAGGAGGCAGAACTACAGCAGATGGTGGAAGCTGAGCATCTGAGGCTAGAGCTGCAGATGGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS-3UTR CAA 90 bp | AGGCTGGGCCTGGGTTTACTTAGCAGGCATGCTGGTGGAAGAGGACAGCGCTGGTCCTGTTTCCTGGCCTaGGACTGGCTTGTTGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RLGLGLLSRHAGGRGQRWSCFLA*DWLVGV Trigger: CACCCCAACAAGCCAGTCCAAGGCCAGGAAACAGGA...CCAGCGCTGTCCTCTTCCACCAGCATGCCTGCTAAGTAAACCCAGGCCCAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS-3UTR CAA 90 bp | TGGCCACGGACCATGGAGGCTGGACTGGTAGTCAGGATAACCATGGTGGCTGGTTCCTGTTTCCTGGCCTaGGACTGGCTTGTTGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: WPRTMEAGLVVRITMVAGSCFLA*DWLVGV Trigger: CACCCCAACAAGCCAGTCCAAGGCCAGGAAACAGGA...ACCAGCCACCATGGTTATCCTGACTACCAGTCCAGCCTCCATGGTCCGTGGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS TCA 90 bp | GGGTGCAGATGTGCTCAGCACCATCACAGTGGCCAAAGGAAGCCTTaGGCGTCTCAGCTGTCTGGTCGTCACACCTACTCACACAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GCRCAQHHHSGQRKP*ASQLSGRHTYSHSL Trigger: CAGGCTGTGTGAGTAGGTGTGACGACCAGACAGCTGAGACGCTCAAGGCTTCCTTTGGCCACTGTGATGGTGCTGAGCACATCTGCACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS CCA 90 bp | GGTGCCGAGGGATTTCTCTGTAGGAGCTCACAGCCAACCAAAGCTTaGTGCAAGGTGTCCAGGATGGCCAAGGTGCCACATGTACCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GAEGFLCRSSQPTKA*CKVSRMAKVPHVPS Trigger: GGAGGGTACATGTGGCACCTTGGCCATCCTGGACACCTTGCACCAAGCTTTGGTTGGCTGTGAGCTCCTACAGAGAAATCCCTCGGCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS-3UTR CAA 90 bp | CCTGGAGGCTGGGCCTGGGTTTACTTAGCAGGCATGCTGGTGGAAGAGGACAGCTCCCCAGGGCTCTTTTaGATATGTTCAGGTCCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: PGGWAWVYLAGMLVEEDSSPGLF*ICSGPG Trigger: TCCGGGACCTGAACATATCAAAAAGAGCCCTGGGGA...GCTGTCCTCTTCCACCAGCATGCCTGCTAAGTAAACCCAGGCCCAGCCTCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS GCA 90 bp | TCGCCAAGCCTGGTGACATGGGTTTCCAGCTCTAGGGTGCAGATGTaGTCAGCACCATCACAGTGGCCAAAGGAAGCCTTGAGCGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SPSLVTWVSSSRVQM*SAPSQWPKEALSVS Trigger: TGAGACGCTCAAGGCTTCCTTTGGCCACTGTGATGGTGCTGAGCACATCTGCACCCTAGAGCTGGAAACCCATGTCACCAGGCTTGGCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS CCA 90 bp | TGGGTTTCCAGCTCTAGGGTGCAGATGTGCTCAGCACCATCACAGTaGCCAAAGGAAGCCTTGAGCGTCTCAGCTGTCTGGTCGTCACAC | + |
|
Preference number: 5 (lower is better) Translates to: WVSSSRVQMCSAPSQ*PKEALSVSAVWSSH Trigger: GTGTGACGACCAGACAGCTGAGACGCTCAAGGCTTCCTTTGGCCACTGTGATGGTGCTGAGCACATCTGCACCCTAGAGCTGGAAACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS-3UTR CAA 90 bp | GATGTGTCCTGGAGGCTGGGCCTGGGTTTACTTAGCAGGCATGCTGGTGGAAGATCCCCAGGGCTCTTTTaGATATGTTCAGGTCCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: DVSWRLGLGLLSRHAGGRSPGLF*ICSGPG Trigger: TCCGGGACCTGAACATATCAAAAAGAGCCCTGGGGA...TCTTCCACCAGCATGCCTGCTAAGTAAACCCAGGCCCAGCCTCCAGGACACATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS GCA 72 bp | TCCTCGGTGCGCAGCCGCACCTCCACCTGTCCGCGCTaGAGCCGCCGGGCGCGCGCCTCCGCCTCTGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSVRSRTSTCPR*SRRARASASAS Trigger: GCTGGCAGAGGCGGAGGCGCGCGCCCGGCGGCTGCAGCGCGGACAGGTGGAGGTGCGGCTGCGCACCGAGGA 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS GCA 72 bp | CGGCGCGGGCGGCGGAGGCGGATCTGTGTCTCGATGTaGTCGCTAAGAGCTCCGCGGGGCAGCCGGGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: RRGRRRRICVSM*SLRAPRGSRGP Trigger: GGGGCCCCGGCTGCCCCGCGGAGCTCTTAGCGAGCACATCGAGACACAGATCCGCCTCCGCCGCCCGCGCCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS GCA 72 bp | AGCTCCCGCACTCGGTGCAAGCTGCGTCGCACCGCCTaGCGAGCCTCCTCGGTGCGCAGCCGCACCTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: SSRTRCKLRRTA*RASSVRSRTST Trigger: GGTGGAGGTGCGGCTGCGCACCGAGGAGGCTCGGCAGGCGGTGCGACGCAGCTTGCACCGAGTGCGGGAGCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS TCA 72 bp | GAGGGTCGGCTCGCAGAGCCAGGCGCGCCTCTTCCCTaGCGTCCGCGTCCCCGCCAGCGATCATCCCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: EGRLAEPGAPLP*RPRPRQRSSQQ Trigger: CTGCTGGGATGATCGCTGGCGGGGACGCGGACGTCAGGGAAGAGGCGCGCCTGGCTCTGCGAGCCGACCCTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS GCA 72 bp | AGCAGCCGGGTTCGTGGAGGCCGCCTCCGCGGAGTTTaGGTCCTCCGTGGCCGTCTCCCCGTCAGCGTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: SSRVRGGRLRGV*VLRGRLPVSVQ Trigger: CTGAACGCTGACGGGGAGACGGCCACGGAGGACGCAAACTCCGCGGAGGCGGCCTCCACGAACCCGGCTGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS GCA 72 bp | GCCTCTGCCAGCGCGCCCTGCGCTCGCTGCAGCTCGTaGGCCGCCGCTTCTGGGATGTCCGACTGGCTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: ASASAPCARCSS*AAASGMSDWLF Trigger: GAAAAGCCAGTCGGACATCCCAGAAGCGGCGGCGCACGAGCTGCAGCGAGCGCAGGGCGCGCTGGCAGAGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS GCA 72 bp | CCTCTAAGCTCTGCCTCCAGTCGCTGCACCTGGCGCTaGAAGCAGGGGACACGCCGCGCCAGCGCCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PLSSASSRCTWR*KQGTRRASASS Trigger: GCTGGAGGCGCTGGCGCGGCGTGTCCCCTGCTTGCAGCGCCAGGTGCAGCGACTGGAGGCAGAGCTTAGAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS CCA 72 bp | TCGTGGAGGCCGCCTCCGCGGAGTTTGCGTCCTCCGTaGCCGTCTCCCCGTCAGCGTTCAGCCCCAGTACCG | + |
|
Preference number: 6 (lower is better) Translates to: SWRPPPRSLRPP*PSPRQRSAPVP Trigger: CGGTACTGGGGCTGAACGCTGACGGGGAGACGGCCACGGAGGACGCAAACTCCGCGGAGGCGGCCTCCACGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS CCA 72 bp | GCAGAGGCGCGCGTGGAACTGGCGGAAGGTGAGCTCTaGAGGGTCGGCTCGCAGAGCCAGGCGCGCCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: AEARVELAEGEL*RVGSQSQARLF Trigger: GAAGAGGCGCGCCTGGCTCTGCGAGCCGACCCTCCAGAGCTCACCTTCCGCCAGTTCCACGCGCGCCTCTGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS CAA 72 bp | CAGCAGCCGGGTTCGTGGAGGCCGCCTCCGCGGAGTTaGCGTCCTCCGTGGCCGTCTCCCCGTCAGCGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: QQPGSWRPPPRS*RPPWPSPRQRS Trigger: TGAACGCTGACGGGGAGACGGCCACGGAGGACGCAAACTCCGCGGAGGCGGCCTCCACGAACCCGGCTGCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS CAA 90 bp | CGATCATCCCAGCAGCCGGGTTCGTGGAGGCCGCCTCCGCGGAGTTaGCGTCCTCCGTGGCCGTCTCCCCGTCAGCGTTCAGCCCCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: RSSQQPGSWRPPPRS*RPPWPSPRQRSAPV Trigger: TACTGGGGCTGAACGCTGACGGGGAGACGGCCACGGAGGACGCAAACTCCGCGGAGGCGGCCTCCACGAACCCGGCTGCTGGGATGATCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS GCA 72 bp | CGTAGTGGTGAGCCAAGGCACTCAGCAGCCACTGAGTaGGCCGCGCAGGTCGCCGGTATGGGTCACCCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: RSGEPRHSAATE*AAQVAGMGHPP Trigger: CGGCGGGTGACCCATACCGGCGACCTGCGCGGCGCACTCAGTGGCTGCTGAGTGCCTTGGCTCACCACTACG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS TCA 72 bp | TCTGGGATGTCCGACTGGCTTTTCCAGAGGCCGACCTaGAGGGCCAGGCAACGCGCGTCACTGCTCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SGMSDWLFQRPT*RARQRASLLCS Trigger: GCTGCAGAGCAGTGACGCGCGTTGCCTGGCCCTTCAGGTCGGCCTCTGGAAAAGCCAGTCGGACATCCCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
||
| CDS GCA 72 bp | GAGCTGAGGCCCTTCCGACCTGTAACCTCTAAGCTCTaGCTCCAGTCGCTGCACCTGGCGCTGCAAGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: ELRPFRPVTSKL*LQSLHLALQAG Trigger: CCCTGCTTGCAGCGCCAGGTGCAGCGACTGGAGGCAGAGCTTAGAGGTTACAGGTCGGAAGGGCCTCAGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS GCA 72 bp | GTCTGGTCGTCACACCTACTCACACAGCCTGAGGGTTaGACCAGGGGTACCTCACCATGGGCCTGTGGGCGC | + |
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Preference number: 6 (lower is better) Translates to: VWSSHLLTQPEG*TRGTSPWACGR Trigger: GCGCCCACAGGCCCATGGTGAGGTACCCCTGGTGCAACCCTCAGGCTGTGTGAGTAGGTGTGACGACCAGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS CCA 72 bp | ACACAGCCTGAGGGTTGCACCAGGGGTACCTCACCATaGGCCTGTGGGCGCCCTGGCTTTTCCTGCCACCTT | + |
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Preference number: 6 (lower is better) Translates to: TQPEGCTRGTSP*ACGRPGFSCHL Trigger: AAGGTGGCAGGAAAAGCCAGGGCGCCCACAGGCCCATGGTGAGGTACCCCTGGTGCAACCCTCAGGCTGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS TCA 72 bp | CTCAGCTGTCTGGTCGTCACACCTACTCACACAGCCTaGGGGTTGCACCAGGGGTACCTCACCATGGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LSCLVVTPTHTA*GLHQGYLTMGL Trigger: CAGGCCCATGGTGAGGTACCCCTGGTGCAACCCTCAGGCTGTGTGAGTAGGTGTGACGACCAGACAGCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS TCA 72 bp | GTGTCCCCAGGGTCTGCAGCTGTTCGCCAAGCCTGGTaGCATGGGTTTCCAGCTCTAGGGTGCAGATGTGCT | + |
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Preference number: 6 (lower is better) Translates to: VSPGSAAVRQAW*HGFPALGCRCA Trigger: AGCACATCTGCACCCTAGAGCTGGAAACCCATGTCACCAGGCTTGGCGAACAGCTGCAGACCCTGGGGACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS GCA 72 bp | TGCAGCTCTAGCCTCAGATGCTCAGCTTCCACCATCTaGTGTAGTTCTGCCTCCTCCTCCGGTGTCCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: CSSSLRCSASTI*CSSASSSGVPR Trigger: CCTGGGGACACCGGAGGAGGAGGCAGAACTACAGCAGATGGTGGAAGCTGAGCATCTGAGGCTAGAGCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS CCA 72 bp | CCCAGGGTCTGCAGCTGTTCGCCAAGCCTGGTGACATaGGTTTCCAGCTCTAGGGTGCAGATGTGCTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: PRVCSCSPSLVT*VSSSRVQMCSA Trigger: TGCTGAGCACATCTGCACCCTAGAGCTGGAAACCCATGTCACCAGGCTTGGCGAACAGCTGCAGACCCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS TCA 72 bp | GTCCAGGATGGCCAAGGTGCCACATGTACCCTCCTGTaGGGGGTTCCGGTCCAGGGCATTCAGCAACATCTT | + |
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Preference number: 6 (lower is better) Translates to: VQDGQGATCTLL*GVPVQGIQQHL Trigger: AAGATGTTGCTGAATGCCCTGGACCGGAACCCCTCACAGGAGGGTACATGTGGCACCTTGGCCATCCTGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS CCA 72 bp | CACAGCCAACCAAAGCTTGGTGCAAGGTGTCCAGGATaGCCAAGGTGCCACATGTACCCTCCTGTGAGGGGT | + |
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Preference number: 6 (lower is better) Translates to: HSQPKLGARCPG*PRCHMYPPVRG Trigger: ACCCCTCACAGGAGGGTACATGTGGCACCTTGGCCATCCTGGACACCTTGCACCAAGCTTTGGTTGGCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS CCA 72 bp | AGCTCTAGGGTGCAGATGTGCTCAGCACCATCACAGTaGCCAAAGGAAGCCTTGAGCGTCTCAGCTGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: SSRVQMCSAPSQ*PKEALSVSAVW Trigger: CCAGACAGCTGAGACGCTCAAGGCTTCCTTTGGCCACTGTGATGGTGCTGAGCACATCTGCACCCTAGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS TCA 72 bp | CGGCAGTCCAAGTGGTGGAAAACCTCCTGCAGATACTaGTCCAGACCGGTAGCCAGCACCACGATCTCATTC | + |
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Preference number: 6 (lower is better) Translates to: RQSKWWKTSCRY*SRPVASTTISF Trigger: GAATGAGATCGTGGTGCTGGCTACCGGTCTGGATCAGTATCTGCAGGAGGTTTTCCACCACTTGGACTGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS TCA 72 bp | TGTGCTCAGCACCATCACAGTGGCCAAAGGAAGCCTTaGGCGTCTCAGCTGTCTGGTCGTCACACCTACTCA | + |
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Preference number: 6 (lower is better) Translates to: CAQHHHSGQRKP*ASQLSGRHTYS Trigger: TGAGTAGGTGTGACGACCAGACAGCTGAGACGCTCAAGGCTTCCTTTGGCCACTGTGATGGTGCTGAGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS GCA 72 bp | CTGGTGACATGGGTTTCCAGCTCTAGGGTGCAGATGTaGTCAGCACCATCACAGTGGCCAAAGGAAGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: LVTWVSSSRVQM*SAPSQWPKEAL Trigger: CAAGGCTTCCTTTGGCCACTGTGATGGTGCTGAGCACATCTGCACCCTAGAGCTGGAAACCCATGTCACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS CAA 72 bp | ATGTGCTCAGCACCATCACAGTGGCCAAAGGAAGCCTaGAGCGTCTCAGCTGTCTGGTCGTCACACCTACTC | + |
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Preference number: 6 (lower is better) Translates to: MCSAPSQWPKEA*SVSAVWSSHLL Trigger: GAGTAGGTGTGACGACCAGACAGCTGAGACGCTCAAGGCTTCCTTTGGCCACTGTGATGGTGCTGAGCACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS CCA 72 bp | GGATTTCTCTGTAGGAGCTCACAGCCAACCAAAGCTTaGTGCAAGGTGTCCAGGATGGCCAAGGTGCCACAT | + |
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Preference number: 6 (lower is better) Translates to: GFLCRSSQPTKA*CKVSRMAKVPH Trigger: ATGTGGCACCTTGGCCATCCTGGACACCTTGCACCAAGCTTTGGTTGGCTGTGAGCTCCTACAGAGAAATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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| CDS GCA 72 bp | AGGGCTCTTTTTGATATGTTCAGGTCCCGGAGCCTTTaGAGGAGTTGTAGCACATCCACCAGCTTTTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: RALFDMFRSRSL*RSCSTSTSFSS Trigger: GGAAGAAAAGCTGGTGGATGTGCTACAACTCCTGCAAAGGCTCCGGGACCTGAACATATCAAAAAGAGCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032132.9 ENSMUST00000159570.9 |
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