Pregenerated sensors for EFCAB8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044083Ensembl transcript IDs: ENSMUST00000126656.4, ENSMUST00000144827.2, ENSMUST00000175856.3, ENSMUST00000230058.2
Found 304 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGGGTGTGGCAGCAGGTGAGCCGGCCACCATGTCTGTGGGGATCTaGCCCCGGAAAGCCTCCATGTCACTCCGCATATCACTGGCCACC | + |
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Preference number: 1 (lower is better) Translates to: EGVAAGEPATMSVGI*PRKASMSLRISLAT Trigger: GGTGGCCAGTGATATGCGGAGTGACATGGAGGCTTTCCGGGGTCAGATCCCCACAGACATGGTGGCCGGCTCACCTGCTGCCACACCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
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| 3UTR TCA 90 bp | TTGTCCCACGGAAACCATGGAGAGGGAGGAGGGTGTGGCAGCAGGTaGGCCGGCCACCATGTCTGTGGGGATCTGACCCCGGAAAGCCTC | + |
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Preference number: 1 (lower is better) Translates to: LSHGNHGEGGGCGSR*AGHHVCGDLTPESL Trigger: GAGGCTTTCCGGGGTCAGATCCCCACAGACATGGTGGCCGGCTCACCTGCTGCCACACCCTCCTCCCTCTCCATGGTTTCCGTGGGACAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
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| 3UTR CCA 90 bp | AGAGGGAGGAGGGTGTGGCAGCAGGTGAGCCGGCCACCATGTCTGTaGGGATCTGACCCCGGAAAGCCTCCATGTCACTCCGCATATCAC | + |
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Preference number: 1 (lower is better) Translates to: RGRRVWQQVSRPPCL*GSDPGKPPCHSAYH Trigger: GTGATATGCGGAGTGACATGGAGGCTTTCCGGGGTCAGATCCCCACAGACATGGTGGCCGGCTCACCTGCTGCCACACCCTCCTCCCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
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| 3UTR TCA 90 bp | GGAGGTGGAGGAAAGGGGCTTCAGGGAGGTAGACCAGTTGGAGGGTaGTTGTCCCACGGAAACCATGGAGAGGGAGGAGGGTGTGGCAGC | + |
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Preference number: 1 (lower is better) Translates to: GGGGKGLQGGRPVGG*LSHGNHGEGGGCGS Trigger: GCTGCCACACCCTCCTCCCTCTCCATGGTTTCCGTGGGACAATCACCCTCCAACTGGTCTACCTCCCTGAAGCCCCTTTCCTCCACCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
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| 3UTR CCA 90 bp | CTTCGGGGCAGGCCCAGGATATGCGGTGGCGTAGAAGAACCAGAATaGGCCGGAGAGGCTGATGAAGGCCTGAGGAAGGAGGTGGAGGAA | + |
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Preference number: 1 (lower is better) Translates to: LRGRPRICGGVEEPE*AGEADEGLRKEVEE Trigger: TTCCTCCACCTCCTTCCTCAGGCCTTCATCAGCCTCTCCGGCCCATTCTGGTTCTTCTACGCCACCGCATATCCTGGGCCTGCCCCGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
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| 3UTR CCA 90 bp | ACAACCTCGCTCCCATGGTGCAGGGGGATGACAGTCATGGGAAGGTaGAAGCGCAGGCGATACTGGCTCTTCCTCATCTCCTCCTTGCCC | + |
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Preference number: 1 (lower is better) Translates to: TTSLPWCRGMTVMGR*KRRRYWLFLISSLP Trigger: GGGCAAGGAGGAGATGAGGAAGAGCCAGTATCGCCTGCGCTTCCACCTTCCCATGACTGTCATCCCCCTGCACCATGGGAGCGAGGTTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230058.2 |
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| 3UTR GCA 90 bp | GTAGACCTGAGGAGAGATCTGGGAGCAGAACGGGAGGTGAGCGCTTaGAGGACCCGGCAGGACTGGAGACCAAGAATTGGCTTGCAGCAA | + |
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Preference number: 1 (lower is better) Translates to: VDLRRDLGAEREVSA*RTRQDWRPRIGLQQ Trigger: TTGCTGCAAGCCAATTCTTGGTCTCCAGTCCTGCCGGGTCCTGCAAGCGCTCACCTCCCGTTCTGCTCCCAGATCTCTCCTCAGGTCTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
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| 3UTR TCA 90 bp | AGCGCCCATCAGAGGAGGCAAGGCAAGGTCACAGCAACCTCAGCTTaGCAGGAGGAAGGGTCCGGTCCAGGTAAAACAACAGACAGCAGG | + |
|
Preference number: 1 (lower is better) Translates to: SAHQRRQGKVTATSA*QEEGSGPGKTTDSR Trigger: CCTGCTGTCTGTTGTTTTACCTGGACCGGACCCTTCCTCCTGTCAAGCTGAGGTTGCTGTGACCTTGCCTTGCCTCCTCTGATGGGCGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
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| 3UTR TCA 90 bp | CTTCGGGTGCTGCAAGAAGGAGATAACATCTGGCCTTGGGGTCTCTaGCCTCTTCGGGGCAGGCCCAGGATATGCGGTGGCGTAGAAGAA | + |
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Preference number: 1 (lower is better) Translates to: LRVLQEGDNIWPWGL*PLRGRPRICGGVEE Trigger: TTCTTCTACGCCACCGCATATCCTGGGCCTGCCCCGAAGAGGTCAGAGACCCCAAGGCCAGATGTTATCTCCTTCTTGCAGCACCCGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
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| 3UTR TCA 90 bp | TTAAACATGCCACTTTTACAACCTCGCTCCCATGGTGCAGGGGGATaGCAGTCATGGGAAGGTGGAAGCGCAGGCGATACTGGCTCTTCC | + |
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Preference number: 1 (lower is better) Translates to: LNMPLLQPRSHGAGG*QSWEGGSAGDTGSS Trigger: GGAAGAGCCAGTATCGCCTGCGCTTCCACCTTCCCATGACTGTCATCCCCCTGCACCATGGGAGCGAGGTTGTAAAAGTGGCATGTTTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230058.2 |
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| 3UTR CCA 90 bp | GCCACGTCGATAACCCACATCTGCTGGTGGCCGTACTGCTTGGACTaGGAAAGGTGGAAGGATTCCAACATTGAGAAGGTCTCAGACCAG | + |
|
Preference number: 1 (lower is better) Translates to: ATSITHICWWPYCLD*ERWKDSNIEKVSDQ Trigger: CTGGTCTGAGACCTTCTCAATGTTGGAATCCTTCCACCTTTCCCAGTCCAAGCAGTACGGCCACCAGCAGATGTGGGTTATCGACGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
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| 3UTR GCA 90 bp | AACCGTTTGGTTAAACATGCCACTTTTACAACCTCGCTCCCATGGTaGAGGGGGATGACAGTCATGGGAAGGTGGAAGCGCAGGCGATAC | + |
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Preference number: 1 (lower is better) Translates to: NRLVKHATFTTSLPW*RGMTVMGRWKRRRY Trigger: GTATCGCCTGCGCTTCCACCTTCCCATGACTGTCATCCCCCTGCACCATGGGAGCGAGGTTGTAAAAGTGGCATGTTTAACCAAACGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230058.2 |
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| 3UTR CCA 90 bp | TTGAACCGTTTGGTTAAACATGCCACTTTTACAACCTCGCTCCCATaGTGCAGGGGGATGACAGTCATGGGAAGGTGGAAGCGCAGGCGA | + |
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Preference number: 1 (lower is better) Translates to: LNRLVKHATFTTSLP*CRGMTVMGRWKRRR Trigger: TCGCCTGCGCTTCCACCTTCCCATGACTGTCATCCCCCTGCACCATGGGAGCGAGGTTGTAAAAGTGGCATGTTTAACCAAACGGTTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230058.2 |
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| 3UTR TCA 90 bp | GTGGCCGTACTGCTTGGACTGGGAAAGGTGGAAGGATTCCAACATTaGGAAGGTCTCAGACCAGAACTGCAGGATCCCATCTTTGGTGAC | + |
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Preference number: 1 (lower is better) Translates to: VAVLLGLGKVEGFQH*EGLRPELQDPIFGD Trigger: GTCACCAAAGATGGGATCCTGCAGTTCTGGTCTGAGACCTTCTCAATGTTGGAATCCTTCCACCTTTCCCAGTCCAAGCAGTACGGCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
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| 3UTR CCA 90 bp | CAGGCCCACCTCCCCACTCTCTCCTCCTTACACTTTTCTGTGAGATaGTTCTGGCACCAGGACTTGTCTGAACTTTCATGCAAGGCTATG | + |
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Preference number: 1 (lower is better) Translates to: QAHLPTLSSLHFSVR*FWHQDLSELSCKAM Trigger: CATAGCCTTGCATGAAAGTTCAGACAAGTCCTGGTGCCAGAACCATCTCACAGAAAAGTGTAAGGAGGAGAGAGTGGGGAGGTGGGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
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| 3UTR TCA 90 bp | ACATGCCACTTTTACAACCTCGCTCCCATGGTGCCTTTGTCATCATaGCCACCTACAGATTGTGAAGGGCAAGCTGAAGGGACAAGAGGC | + |
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Preference number: 1 (lower is better) Translates to: TCHFYNLAPMVPLSS*PPTDCEGQAEGTRG Trigger: GCCTCTTGTCCCTTCAGCTTGCCCTTCACAATCTGTAGGTGGTCATGATGACAAAGGCACCATGGGAGCGAGGTTGTAAAAGTGGCATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
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| 3UTR GCA 90 bp | ACAGCTGAAGGTGACCTGGACTATCTTCAGCTCAGTGGAGGCAACTaGAATGAGGCTCATGTTGTGCAGATATGCCACGTCGATAACCCA | + |
|
Preference number: 1 (lower is better) Translates to: TAEGDLDYLQLSGGN*NEAHVVQICHVDNP Trigger: TGGGTTATCGACGTGGCATATCTGCACAACATGAGCCTCATTGCAGTTGCCTCCACTGAGCTGAAGATAGTCCAGGTCACCTTCAGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
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| 3UTR TCA 90 bp | CTCCTTACACTTTTCTGTGAGATGGTTCTGGCACCAGGACTTGTCTaGACTTTCATGCAAGGCTATGAGTTAGACTTCAAGTGGGGCCTG | + |
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Preference number: 1 (lower is better) Translates to: LLTLFCEMVLAPGLV*TFMQGYELDFKWGL Trigger: CAGGCCCCACTTGAAGTCTAACTCATAGCCTTGCATGAAAGTTCAGACAAGTCCTGGTGCCAGAACCATCTCACAGAAAAGTGTAAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
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| 3UTR-3UTR TCA 90 bp | GGGAAGGAAGGGGCTGCATCCTCCCAGCCTGGCAGAGAGCGAGCCAGGGACGTGATGTCTGTGGGGATCTaGCCCCGGAAAGCCTCCATG | + |
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Preference number: 2 (lower is better) Translates to: GKEGAASSQPGRERARDVMSVGI*PRKASM Trigger: CATGGAGGCTTTCCGGGGTCAGATCCCCACAGACAT...CACGTCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCAGCCCCTTCCTTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
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| 3UTR-3UTR TCA 90 bp | GGGAAGGAAGGGGCTGCATCCTCCCAGCCTGGCAGAGAGCGAGCCAGGGACGTGAGGCTGATGAAGGCCTaGGGAAGGAGGTGGAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: GKEGAASSQPGRERARDVRLMKA*GRRWRK Trigger: TTTCCTCCACCTCCTTCCTCAGGCCTTCATCAGCCT...CACGTCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCAGCCCCTTCCTTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
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| 3UTR CAA 90 bp | GGTAGACCTGAGGAGAGATCTGGGAGCAGAACGGGAGGTGAGCGCTaGCAGGACCCGGCAGGACTGGAGACCAAGAATTGGCTTGCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: GRPEERSGSRTGGER*QDPAGLETKNWLAA Trigger: TGCTGCAAGCCAATTCTTGGTCTCCAGTCCTGCCGGGTCCTGCAAGCGCTCACCTCCCGTTCTGCTCCCAGATCTCTCCTCAGGTCTACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
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| 3UTR-3UTR TCA 90 bp | GGGAAGGAAGGGGCTGCATCCTCCCAGCCTGGCAGAGAGCGAGCCAGGGACGTGGCACCAGGACTTGTCTaGACTTTCATGCAAGGCTAT | + |
|
Preference number: 2 (lower is better) Translates to: GKEGAASSQPGRERARDVAPGLV*TFMQGY Trigger: ATAGCCTTGCATGAAAGTTCAGACAAGTCCTGGTGC...CACGTCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCAGCCCCTTCCTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
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| 3UTR-3UTR GCA 90 bp | ATACACACTGACCCAGCGCCCATCAGAGGAGGCAAGGCAAGGTCACAGCAACCTGAGGAGGGGGCACCCTaGAGGCTTAGTTGCCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: IHTDPAPIRGGKARSQQPEEGAP*RLSCQH Trigger: GTGCTGGCAACTAAGCCTGCAGGGTGCCCCCTCCTC...AGGTTGCTGTGACCTTGCCTTGCCTCCTCTGATGGGCGCTGGGTCAGTGTGTAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGTAAGGCAGAGCATACACACTGACCCAGCGCCCATCAGAGGAGGCAAGGCAATCCAGGACCTTGGTTaGGCCAGCAGGGTGAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: EVRQSIHTDPAPIRGGKAIQDLG*ASRVRR Trigger: CCTCCTCACCCTGCTGGCCCAACCAAGGTCCTGGAT...TGCCTTGCCTCCTCTGATGGGCGCTGGGTCAGTGTGTATGCTCTGCCTTACCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
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| 3UTR-3UTR TCA 90 bp | ATACACACTGACCCAGCGCCCATCAGAGGAGGCAAGGCAAGGTCACAGCAACCTGGATCCCATCTTTGGTaGCAGTCAGGAAACGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: IHTDPAPIRGGKARSQQPGSHLW*QSGNAP Trigger: TGGGGCGTTTCCTGACTGTCACCAAAGATGGGATCC...AGGTTGCTGTGACCTTGCCTTGCCTCCTCTGATGGGCGCTGGGTCAGTGTGTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
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| 3UTR CAA 90 bp | AGGTGGAAGAGGCCAGGCAGGGTCTGTGCAGGCAAGTGGTGGAGTTaGACTGGCTTTTTAAGGTCTCCGATTTCCCCTTCTCCACCTAAG | + |
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Preference number: 2 (lower is better) Translates to: RWKRPGRVCAGKWWS*TGFLRSPISPSPPK Trigger: CTTAGGTGGAGAAGGGGAAATCGGAGACCTTAAAAAGCCAGTCAAACTCCACCACTTGCCTGCACAGACCCTGCCTGGCCTCTTCCACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
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| 3UTR CAA 90 bp | CCGGCCTACTTGGTCCAGGATCTTGTGCATCATGAAGTCGGGCTGTaGGATCGGCTTAAGGTCAGTGAAGGACAGGCATTGGTAGACCTG | + |
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Preference number: 2 (lower is better) Translates to: PAYLVQDLVHHEVGL*DRLKVSEGQALVDL Trigger: CAGGTCTACCAATGCCTGTCCTTCACTGACCTTAAGCCGATCCAACAGCCCGACTTCATGATGCACAAGATCCTGGACCAAGTAGGCCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
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| 3UTR-3UTR CCA 90 bp | CCCTGCTACAGAACAGAGAAAATAATGAACACCTCAACACATGAGGTGGGAGCTAGAGGGAGGAGGGTGTaGCAGCAGGTGAGCCGGCCA | + |
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Preference number: 2 (lower is better) Translates to: PCYRTEKIMNTSTHEVGARGRRV*QQVSRP Trigger: TGGCCGGCTCACCTGCTGCCACACCCTCCTCCCTCT...AGCTCCCACCTCATGTGTTGAGGTGTTCATTATTTTCTCTGTTCTGTAGCAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
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| 3UTR-3UTR TCA 90 bp | GAGGTAAGGCAGAGCATACACACTGACCCAGCGCCCATCAGAGGAGGCAAGGCAGTGCCTTTGTCATCATaGCCACCTACAGATTGTGAA | + |
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Preference number: 2 (lower is better) Translates to: EVRQSIHTDPAPIRGGKAVPLSS*PPTDCE Trigger: TTCACAATCTGTAGGTGGTCATGATGACAAAGGCAC...TGCCTTGCCTCCTCTGATGGGCGCTGGGTCAGTGTGTATGCTCTGCCTTACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTTTACAACCTCGCTCCCATGGTGCCTTTGTCATCATGACCACCTACAGATTGGCCATCCAGGACCTTaGTTGGGCCAGCAGGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: TFTTSLPWCLCHHDHLQIGHPGP*LGQQGE Trigger: CTCACCCTGCTGGCCCAACCAAGGTCCTGGATGGCC...AATCTGTAGGTGGTCATGATGACAAAGGCACCATGGGAGCGAGGTTGTAAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
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| 3UTR-3UTR GCA 90 bp | CAGAACTGCAGGATCCCATCTTTGGTGACAGTCAGGAAACGCCCCATCTTTTTGACCTCGCTCCCATGGTaGCTTTGTCATCATGACCAC | + |
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Preference number: 2 (lower is better) Translates to: QNCRIPSLVTVRKRPIFLTSLPW*LCHHDH Trigger: GTGGTCATGATGACAAAGGCACCATGGGAGCGAGGT...CAAAAAGATGGGGCGTTTCCTGACTGTCACCAAAGATGGGATCCTGCAGTTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
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| 3UTR-3UTR GCA 90 bp | CCATTTGTAGCTAGAGGGACCTTCAGAGGAAGTGTGCTAAGCAACAGGAGGCTTCCCTGCAGGCTTAGTTaGCAGCACTTTTCCATCACA | + |
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Preference number: 2 (lower is better) Translates to: PFVARGTFRGSVLSNRRLPCRLS*QHFSIT Trigger: TGTGATGGAAAAGTGCTGGCAACTAAGCCTGCAGGG...AAGCCTCCTGTTGCTTAGCACACTTCCTCTGAAGGTCCCTCTAGCTACAAATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
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| 3UTR-3UTR GCA 90 bp | CCATTTGTAGCTAGAGGGACCTTCAGAGGAAGTGTGCTAAGCAACAGGAGGCTTCTCAGTGGAGGCAACTaGAATGAGGCTCATGTTGTG | + |
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Preference number: 2 (lower is better) Translates to: PFVARGTFRGSVLSNRRLLSGGN*NEAHVV Trigger: CACAACATGAGCCTCATTGCAGTTGCCTCCACTGAG...AAGCCTCCTGTTGCTTAGCACACTTCCTCTGAAGGTCCCTCTAGCTACAAATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
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| 3UTR-3UTR CCA 90 bp | TTTAAGGAACCTCTAGAACCCTCTCATACAAACCTATACAATTGGCACGTAGTCTGCATCCTCCCAGCCTaGCAGAGAGCGAGCCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: FKEPLEPSHTNLYNWHVVCILPA*QRASQG Trigger: TCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCA...GACTACGTGCCAATTGTATAGGTTTGTATGAGAGGGTTCTAGAGGTTCCTTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
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| 3UTR CAA 90 bp | TCCAACATTGAGAAGGTCTCAGACCAGAACTGCAGGATCCCATCTTaGGTGACAGTCAGGAAACGCCCCATCTTTTTGAACCGTTTGGTT | + |
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Preference number: 2 (lower is better) Translates to: SNIEKVSDQNCRIPS*VTVRKRPIFLNRLV Trigger: AACCAAACGGTTCAAAAAGATGGGGCGTTTCCTGACTGTCACCAAAGATGGGATCCTGCAGTTCTGGTCTGAGACCTTCTCAATGTTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
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| 3UTR-3UTR GCA 90 bp | TACAGAACAGAGAAAATAATGAACACCTCAACACATGAGGTGGGAGCTCCACCTCCTTCTCCAGAACTGTaGAGAGCCACAAGACAGCTG | + |
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Preference number: 2 (lower is better) Translates to: YRTEKIMNTSTHEVGAPPPSPEL*RATRQL Trigger: CAGCTGTCTTGTGGCTCTGCACAGTTCTGGAGAAGG...AGGTGGAGCTCCCACCTCATGTGTTGAGGTGTTCATTATTTTCTCTGTTCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
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| 3UTR-3UTR CCA 90 bp | AGTCAAGGAAAGCTCTCTGGAGGAAGTAACACTTGTGTTGGTTCAAAAGAAAAGACCCACATCTGCTGGTaGCCGTACTGCTTGGACTGG | + |
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Preference number: 2 (lower is better) Translates to: SQGKLSGGSNTCVGSKEKTHICW*PYCLDW Trigger: CCAGTCCAAGCAGTACGGCCACCAGCAGATGTGGGT...CTTTTCTTTTGAACCAACACAAGTGTTACTTCCTCCAGAGAGCTTTCCTTGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTGCTACAGAACAGAGAAAATAATGAACACCTCAACACATGAGGTGGGAGCTCACTTTTCTGTGAGATaGTTCTGGCACCAGGACTTG | + |
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Preference number: 2 (lower is better) Translates to: PCYRTEKIMNTSTHEVGAHFSVR*FWHQDL Trigger: CAAGTCCTGGTGCCAGAACCATCTCACAGAAAAGTG...AGCTCCCACCTCATGTGTTGAGGTGTTCATTATTTTCTCTGTTCTGTAGCAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
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| 3UTR-3UTR CCA 90 bp | TCTGCAGGGAGACATTTCAAAAGTCCATTTGTAGCTAGAGGGACCTTCAGAGGATTGGACTGGGAAAGGTaGAAGGATTCCAACATTGAG | + |
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Preference number: 2 (lower is better) Translates to: SAGRHFKSPFVARGTFRGLDWER*KDSNIE Trigger: CTCAATGTTGGAATCCTTCCACCTTTCCCAGTCCAA...TCCTCTGAAGGTCCCTCTAGCTACAAATGGACTTTTGAAATGTCTCCCTGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
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| 3UTR TCA 72 bp | GGAAACCATGGAGAGGGAGGAGGGTGTGGCAGCAGGTaGGCCGGCCACCATGTCTGTGGGGATCTGACCCCG | + |
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Preference number: 3 (lower is better) Translates to: GNHGEGGGCGSR*AGHHVCGDLTP Trigger: CGGGGTCAGATCCCCACAGACATGGTGGCCGGCTCACCTGCTGCCACACCCTCCTCCCTCTCCATGGTTTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
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| 3UTR TCA 72 bp | AGCAGAAGGCGGGGAGGTAAGGCAGAGCATACACACTaGCCCAGCGCCCATCAGAGGAGGCAAGGCAAGGTC | + |
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Preference number: 3 (lower is better) Translates to: SRRRGGKAEHTH*PSAHQRRQGKV Trigger: GACCTTGCCTTGCCTCCTCTGATGGGCGCTGGGTCAGTGTGTATGCTCTGCCTTACCTCCCCGCCTTCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
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| 3UTR TCA 72 bp | GCAGCAGGTGAGCCGGCCACCATGTCTGTGGGGATCTaGCCCCGGAAAGCCTCCATGTCACTCCGCATATCA | + |
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Preference number: 3 (lower is better) Translates to: AAGEPATMSVGI*PRKASMSLRIS Trigger: TGATATGCGGAGTGACATGGAGGCTTTCCGGGGTCAGATCCCCACAGACATGGTGGCCGGCTCACCTGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
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| 3UTR GCA 72 bp | AGGAGAGATCTGGGAGCAGAACGGGAGGTGAGCGCTTaGAGGACCCGGCAGGACTGGAGACCAAGAATTGGC | + |
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Preference number: 3 (lower is better) Translates to: RRDLGAEREVSA*RTRQDWRPRIG Trigger: GCCAATTCTTGGTCTCCAGTCCTGCCGGGTCCTGCAAGCGCTCACCTCCCGTTCTGCTCCCAGATCTCTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
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| 3UTR TCA 72 bp | GGAAAGGGGCTTCAGGGAGGTAGACCAGTTGGAGGGTaGTTGTCCCACGGAAACCATGGAGAGGGAGGAGGG | + |
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Preference number: 3 (lower is better) Translates to: GKGLQGGRPVGG*LSHGNHGEGGG Trigger: CCCTCCTCCCTCTCCATGGTTTCCGTGGGACAATCACCCTCCAACTGGTCTACCTCCCTGAAGCCCCTTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
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| 3UTR TCA 72 bp | CTGCAAGAAGGAGATAACATCTGGCCTTGGGGTCTCTaGCCTCTTCGGGGCAGGCCCAGGATATGCGGTGGC | + |
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Preference number: 3 (lower is better) Translates to: LQEGDNIWPWGL*PLRGRPRICGG Trigger: GCCACCGCATATCCTGGGCCTGCCCCGAAGAGGTCAGAGACCCCAAGGCCAGATGTTATCTCCTTCTTGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
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| 3UTR CCA 72 bp | AGGCCCAGGATATGCGGTGGCGTAGAAGAACCAGAATaGGCCGGAGAGGCTGATGAAGGCCTGAGGAAGGAG | + |
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Preference number: 3 (lower is better) Translates to: RPRICGGVEEPE*AGEADEGLRKE Trigger: CTCCTTCCTCAGGCCTTCATCAGCCTCTCCGGCCCATTCTGGTTCTTCTACGCCACCGCATATCCTGGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
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| 3UTR CCA 72 bp | CTCCCATGGTGCAGGGGGATGACAGTCATGGGAAGGTaGAAGCGCAGGCGATACTGGCTCTTCCTCATCTCC | + |
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Preference number: 3 (lower is better) Translates to: LPWCRGMTVMGR*KRRRYWLFLIS Trigger: GGAGATGAGGAAGAGCCAGTATCGCCTGCGCTTCCACCTTCCCATGACTGTCATCCCCCTGCACCATGGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230058.2 |
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| 3UTR-3UTR CAA 90 bp | ACCTCGCTCCCATGGTGCCTTTGTCATCATGACCACCTACAGATTGTGAAGGGCCATCCAGGACCTTGGTaGGGCCAGCAGGGTGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: TSLPWCLCHHDHLQIVKGHPGPW*GQQGEE Trigger: CTCCTCACCCTGCTGGCCCAACCAAGGTCCTGGATG...GCCCTTCACAATCTGTAGGTGGTCATGATGACAAAGGCACCATGGGAGCGAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
||
| 3UTR TCA 72 bp | CCACTTTTACAACCTCGCTCCCATGGTGCAGGGGGATaGCAGTCATGGGAAGGTGGAAGCGCAGGCGATACT | + |
|
Preference number: 3 (lower is better) Translates to: PLLQPRSHGAGG*QSWEGGSAGDT Trigger: AGTATCGCCTGCGCTTCCACCTTCCCATGACTGTCATCCCCCTGCACCATGGGAGCGAGGTTGTAAAAGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230058.2 |
||
| 3UTR GCA 72 bp | GCCACGTCGATAACCCACATCTGCTGGTGGCCGTACTaGTTGGACTGGGAAAGGTGGAAGGATTCCAACATT | + |
|
Preference number: 3 (lower is better) Translates to: ATSITHICWWPY*LDWERWKDSNI Trigger: AATGTTGGAATCCTTCCACCTTTCCCAGTCCAAGCAGTACGGCCACCAGCAGATGTGGGTTATCGACGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
||
| 3UTR GCA 72 bp | GTTAAACATGCCACTTTTACAACCTCGCTCCCATGGTaGAGGGGGATGACAGTCATGGGAAGGTGGAAGCGC | + |
|
Preference number: 3 (lower is better) Translates to: VKHATFTTSLPW*RGMTVMGRWKR Trigger: GCGCTTCCACCTTCCCATGACTGTCATCCCCCTGCACCATGGGAGCGAGGTTGTAAAAGTGGCATGTTTAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230058.2 |
||
| 3UTR CCA 72 bp | AGGCAGGGTCTGTGCAGGCAAGTGGTGGAGTTTGACTaGCTTTTTAAGGTCTCCGATTTCCCCTTCTCCACC | + |
|
Preference number: 3 (lower is better) Translates to: RQGLCRQVVEFD*LFKVSDFPFST Trigger: GGTGGAGAAGGGGAAATCGGAGACCTTAAAAAGCCAGTCAAACTCCACCACTTGCCTGCACAGACCCTGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
||
| 3UTR CCA 72 bp | TGGAAGAGGCCAGGCAGGGTCTGTGCAGGCAAGTGGTaGAGTTTGACTGGCTTTTTAAGGTCTCCGATTTCC | + |
|
Preference number: 3 (lower is better) Translates to: WKRPGRVCAGKW*SLTGFLRSPIS Trigger: GGAAATCGGAGACCTTAAAAAGCCAGTCAAACTCCACCACTTGCCTGCACAGACCCTGCCTGGCCTCTTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
||
| 3UTR GCA 72 bp | GGTGACCTGGACTATCTTCAGCTCAGTGGAGGCAACTaGAATGAGGCTCATGTTGTGCAGATATGCCACGTC | + |
|
Preference number: 3 (lower is better) Translates to: GDLDYLQLSGGN*NEAHVVQICHV Trigger: GACGTGGCATATCTGCACAACATGAGCCTCATTGCAGTTGCCTCCACTGAGCTGAAGATAGTCCAGGTCACC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
||
| 3UTR CCA 72 bp | ATCTGCTGGTGGCCGTACTGCTTGGACTGGGAAAGGTaGAAGGATTCCAACATTGAGAAGGTCTCAGACCAG | + |
|
Preference number: 3 (lower is better) Translates to: ICWWPYCLDWER*KDSNIEKVSDQ Trigger: CTGGTCTGAGACCTTCTCAATGTTGGAATCCTTCCACCTTTCCCAGTCCAAGCAGTACGGCCACCAGCAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
||
| 3UTR TCA 72 bp | GGCACCAGGACTTGTCTGAACTTTCATGCAAGGCTATaGGTTAGACTTCAAGTGGGGCCTGACACAGAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: GTRTCLNFHARL*VRLQVGPDTEL Trigger: GAGCTCTGTGTCAGGCCCCACTTGAAGTCTAACTCATAGCCTTGCATGAAAGTTCAGACAAGTCCTGGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
||
| 3UTR TCA 72 bp | CCCACCTCCCCACTCTCTCCTCCTTACACTTTTCTGTaGGATGGTTCTGGCACCAGGACTTGTCTGAACTTT | + |
|
Preference number: 3 (lower is better) Translates to: PTSPLSPPYTFL*DGSGTRTCLNF Trigger: AAAGTTCAGACAAGTCCTGGTGCCAGAACCATCTCACAGAAAAGTGTAAGGAGGAGAGAGTGGGGAGGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
||
| 3UTR TCA 72 bp | CTACAGAACAGAGAAAATAATGAACACCTCAACACATaGGGTGGGAGCTCCACCTCACAGGGGACACGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LQNRENNEHLNT*GGSSTSQGTRG Trigger: CCCTCGTGTCCCCTGTGAGGTGGAGCTCCCACCTCATGTGTTGAGGTGTTCATTATTTTCTCTGTTCTGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
||
| 3UTR CCA 72 bp | ATAACCCACATCTGCTGGTGGCCGTACTGCTTGGACTaGGAAAGGTGGAAGGATTCCAACATTGAGAAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: ITHICWWPYCLD*ERWKDSNIEKV Trigger: GACCTTCTCAATGTTGGAATCCTTCCACCTTTCCCAGTCCAAGCAGTACGGCCACCAGCAGATGTGGGTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
||
| 3UTR CCA 72 bp | TTGGTTAAACATGCCACTTTTACAACCTCGCTCCCATaGTGCAGGGGGATGACAGTCATGGGAAGGTGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LVKHATFTTSLP*CRGMTVMGRWK Trigger: CTTCCACCTTCCCATGACTGTCATCCCCCTGCACCATGGGAGCGAGGTTGTAAAAGTGGCATGTTTAACCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230058.2 |
||
| 3UTR TCA 72 bp | TTTTACAACCTCGCTCCCATGGTGCCTTTGTCATCATaGCCACCTACAGATTGTGAAGGGCAAGCTGAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: FYNLAPMVPLSS*PPTDCEGQAEG Trigger: CCCTTCAGCTTGCCCTTCACAATCTGTAGGTGGTCATGATGACAAAGGCACCATGGGAGCGAGGTTGTAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
||
| 3UTR TCA 72 bp | TGTGCTAAGCAACAGGAGGCTTCGGTGTTATTCCAGTaGCAGCTGAAGGTGACCTGGACTATCTTCAGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: CAKQQEASVLFQ*QLKVTWTIFSS Trigger: TGAGCTGAAGATAGTCCAGGTCACCTTCAGCTGTCACTGGAATAACACCGAAGCCTCCTGTTGCTTAGCACA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTGCAGGGAGACATTTCAAAAGTCCATTTGTAGCTAGAGGGACCTTCAGAGGAGCAATGAGGCTCATGTaGTGCAGATATGCCACGTCG | + |
|
Preference number: 3 (lower is better) Translates to: SAGRHFKSPFVARGTFRGAMRLM*CRYATS Trigger: CGACGTGGCATATCTGCACAACATGAGCCTCATTGC...TCCTCTGAAGGTCCCTCTAGCTACAAATGGACTTTTGAAATGTCTCCCTGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
||
| 3UTR CCA 72 bp | CTCTCATACAAACCTATACAATTGGCACGTAGTCTTTaGCATCATGAGAGCTCCCATGATGCCCCAAGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: LSYKPIQLARSL*HHESSHDAPSH Trigger: GTGACTTGGGGCATCATGGGAGCTCTCATGATGCCAAAGACTACGTGCCAATTGTATAGGTTTGTATGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
||
| 3UTR GCA 72 bp | GTTAAACATGCCACTTTTACAACCTCGCTCCCATGGTaGCTTTGTCATCATGACCACCTACAGATTGTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: VKHATFTTSLPW*LCHHDHLQIVK Trigger: CTTCACAATCTGTAGGTGGTCATGATGACAAAGGCACCATGGGAGCGAGGTTGTAAAAGTGGCATGTTTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
||
| 3UTR CCA 72 bp | TTGGTTAAACATGCCACTTTTACAACCTCGCTCCCATaGTGCCTTTGTCATCATGACCACCTACAGATTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LVKHATFTTSLP*CLCHHDHLQIV Trigger: CACAATCTGTAGGTGGTCATGATGACAAAGGCACCATGGGAGCGAGGTTGTAAAAGTGGCATGTTTAACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
||
| 3UTR TCA 72 bp | CTTTTCTGTGAGATGGTTCTGGCACCAGGACTTGTCTaGACTTTCATGCAAGGCTATGAGTTAGACTTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LFCEMVLAPGLV*TFMQGYELDFK Trigger: CTTGAAGTCTAACTCATAGCCTTGCATGAAAGTTCAGACAAGTCCTGGTGCCAGAACCATCTCACAGAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
||
| CDS-3UTR TCA 90 bp | GGGAAGGAAGGGGCTGCATCCTCCCAGCCTGGCAGAGAGCGAGCCAGGGACGTGCATGGTGCAGGGGGATaGCAGTCATGGGAAGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GKEGAASSQPGRERARDVHGAGG*QSWEGG Trigger: TCCACCTTCCCATGACTGTCATCCCCCTGCACCATG...CACGTCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCAGCCCCTTCCTTCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR GCA 90 bp | GGGAAGGAAGGGGCTGCATCCTCCCAGCCTGGCAGAGAGCGAGCCAGGGACGTGGCATCTCTTCCGACATaGTGCTCAGCACCCCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GKEGAASSQPGRERARDVASLPT*CSAPPS Trigger: TGAAGGGGGTGCTGAGCAGCATGTCGGAAGAGATGC...CACGTCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCAGCCCCTTCCTTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR GCA 90 bp | AGGAAGGGGCTGCATCCTCCCAGCCTGGCAGAGAGCGAGCCAGGGACGTGCAAGGGGATGTACTTGACCTaGTGGCACCAGTTGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RKGLHPPSLAESEPGTCKGMYLT*WHQLGW Trigger: CCACCCCAACTGGTGCCAGCAGGTCAAGTACATCCC...CTTGCACGTCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCAGCCCCTTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CCA 90 bp | GGAAGGAAGGGGCTGCATCCTCCCAGCCTGGCAGAGAGCGAGCCAGGGACGTGCGAAGTCTCCTTCTTCTaGGATCCACCTGGTTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GRKGLHPPSLAESEPGTCEVSFF*DPPGWA Trigger: GGCCCAACCAGGTGGATCCCAGAAGAAGGAGACTTC...GCACGTCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCAGCCCCTTCCTTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR TCA 90 bp | GCTGCATCCTCCCAGCCTGGCAGAGAGCGAGCCAGGGACGTGCAAGACCCTATACCCAGTGGAGATAGCTaGCTTCCAGGGCCTGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: AASSQPGRERARDVQDPIPSGDS*LPGPVC Trigger: GCACACAGGCCCTGGAAGTCAGCTATCTCCACTGGG...TATAGGGTCTTGCACGTCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR GCA 90 bp | GGGAAGGAAGGGGCTGCATCCTCCCAGCCTGGCAGAGAGCGAGCCAGGGACGTGTGGTTATGGGGCAGTTaGCCAGGGGAAAGAGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GKEGAASSQPGRERARDVWLWGS*PGERAF Trigger: GAAAGCTCTTTCCCCTGGGCAACTGCCCCATAACCA...CACGTCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCAGCCCCTTCCTTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CCA 90 bp | GGAAGGAAGGGGCTGCATCCTCCCAGCCTGGCAGAGAGCGAGCCAGGGACGTGCCCGTACTGCTTGGACTaGGAAAGGTGGAAGGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: GRKGLHPPSLAESEPGTCPYCLD*ERWKDS Trigger: GGAATCCTTCCACCTTTCCCAGTCCAAGCAGTACGG...GCACGTCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCAGCCCCTTCCTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CCA 90 bp | GGGAAGGAAGGGGCTGCATCCTCCCAGCCTGGCAGAGAGCGAGCCAGGGACGTGTGGTGGCATTGCCCTTaGTGTCCCCATAGCAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: GKEGAASSQPGRERARDVWWHCP*CPHSRT Trigger: TGTTCTGCTATGGGGACACCAAGGGCAATGCCACCA...CACGTCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCAGCCCCTTCCTTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CCA 90 bp | GGAAGGAAGGGGCTGCATCCTCCCAGCCTGGCAGAGAGCGAGCCAGGGACGTGCATGTACTTGACCTGCTaGCACCAGTTGGGGTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GRKGLHPPSLAESEPGTCMYLTC*HQLGWR Trigger: TCTCCACCCCAACTGGTGCCAGCAGGTCAAGTACAT...GCACGTCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCAGCCCCTTCCTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CCA 90 bp | GCTGCATCCTCCCAGCCTGGCAGAGAGCGAGCCAGGGACGTGCAAGACCCTATAACACTCACTAGCCCCTaGAGGCAGCCACTCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: AASSQPGRERARDVQDPITLTSP*RQPLTT Trigger: GGTGGTGAGTGGCTGCCTCCAGGGGCTAGTGAGTGT...TATAGGGTCTTGCACGTCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CCA 90 bp | GGAAGGAAGGGGCTGCATCCTCCCAGCCTGGCAGAGAGCGAGCCAGGGACGTGCTCTCATCAGTGGCCATaGCACCCACAACACTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GRKGLHPPSLAESEPGTCSHQWP*HPQHSH Trigger: GTGAGAGTGTTGTGGGTGCCATGGCCACTGATGAGA...GCACGTCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCAGCCCCTTCCTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR GCA 90 bp | GGAAGGAAGGGGCTGCATCCTCCCAGCCTGGCAGAGAGCGAGCCAGGGACGTGCCTCAGTGGAGGCAACTaGAATGAGGCTCATGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GRKGLHPPSLAESEPGTCLSGGN*NEAHVV Trigger: CACAACATGAGCCTCATTGCAGTTGCCTCCACTGAG...GCACGTCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCAGCCCCTTCCTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR GCA 90 bp | GGGAAGGAAGGGGCTGCATCCTCCCAGCCTGGCAGAGAGCGAGCCAGGGACGTGCACCTTGGGCTTGTATaGTGCCCCCACAATTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GKEGAASSQPGRERARDVHLGLV*CPHNFA Trigger: AGCAAAATTGTGGGGGCAGCATACAAGCCCAAGGTG...CACGTCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCAGCCCCTTCCTTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000126656.4 ENSMUST00000175856.3 |
||
| CDS-3UTR CCA 90 bp | GGGAAGGAAGGGGCTGCATCCTCCCAGCCTGGCAGAGAGCGAGCCAGGGACGTGTCTCCACTGACACACTaGACTGCAACAGCAACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GKEGAASSQPGRERARDVSPLTH*TATATS Trigger: GGAAGTTGCTGTTGCAGTCCAGTGTGTCAGTGGAGA...CACGTCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCAGCCCCTTCCTTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CCA 90 bp | GCTGCATCCTCCCAGCCTGGCAGAGAGCGAGCCAGGGACGTGCAAGACCCTATACTCCTTCTCCTCCTGTaGCAAGTGGTGCTCGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AASSQPGRERARDVQDPILLLLL*QVVLGA Trigger: TGCTCCGAGCACCACTTGCCACAGGAGGAGAAGGAG...TATAGGGTCTTGCACGTCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| 3UTR CAA 72 bp | GAGGAGAGATCTGGGAGCAGAACGGGAGGTGAGCGCTaGCAGGACCCGGCAGGACTGGAGACCAAGAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: EERSGSRTGGER*QDPAGLETKNW Trigger: CCAATTCTTGGTCTCCAGTCCTGCCGGGTCCTGCAAGCGCTCACCTCCCGTTCTGCTCCCAGATCTCTCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
||
| CDS-3UTR TCA 90 bp | GGGAAGGAAGGGGCTGCATCCTCCCAGCCTGGCAGAGAGCGAGCCAGGGACGTGCATACTTCTGCCAAGTaGCAAAGCCATTGCAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GKEGAASSQPGRERARDVHTSAK*QSHCSL Trigger: CAGACTGCAATGGCTTTGTCACTTGGCAGAAGTATG...CACGTCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCAGCCCCTTCCTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR TCA 90 bp | GCTGCATCCTCCCAGCCTGGCAGAGAGCGAGCCAGGGACGTGCAAGACCCTATACTTTACTGTCCCCCGTaGGGAGGATCCAGTCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AASSQPGRERARDVQDPILYCPP*GGSSRS Trigger: AGAACGACTGGATCCTCCTCACGGGGGACAGTAAAG...TATAGGGTCTTGCACGTCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR GCA 90 bp | AGGAAGGGGCTGCATCCTCCCAGCCTGGCAGAGAGCGAGCCAGGGACGTGCAAGGGCTCCATTCTCGTCTaGCTCCTTCTCAAACACCTT | + |
|
Preference number: 4 (lower is better) Translates to: RKGLHPPSLAESEPGTCKGSILV*LLLKHL Trigger: AAGGTGTTTGAGAAGGAGGCAGACGAGAATGGAGCC...CTTGCACGTCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCAGCCCCTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CCA 90 bp | AGGAAGGGGCTGCATCCTCCCAGCCTGGCAGAGAGCGAGCCAGGGACGTGCAAGCCATCTTTTGAGGTTTaGGGCTCTCTCCTGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RKGLHPPSLAESEPGTCKPSFEV*GSLLAS Trigger: AGAAGCCAGGAGAGAGCCCCAAACCTCAAAAGATGG...CTTGCACGTCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCAGCCCCTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CCA 90 bp | CTCGCTCCCATGGTGCAGGGGGATGACAGTCATGGGAAGGTGGAAGCGCAGGCGCACTGTTGTGGCTGGTaGGATCTGTCACTGGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: LAPMVQGDDSHGKVEAQAHCCGW*DLSLEQ Trigger: CTGTTCCAGTGACAGATCCCACCAGCCACAACAGTG...CGCCTGCGCTTCCACCTTCCCATGACTGTCATCCCCCTGCACCATGGGAGCGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230058.2 |
||
| CDS-3UTR CCA 90 bp | AGGAAGGGGCTGCATCCTCCCAGCCTGGCAGAGAGCGAGCCAGGGACGTGCAAGGGCCAAATGTTCCTATaGCATCACCAGAGAGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RKGLHPPSLAESEPGTCKGQMFL*HHQRVS Trigger: GGAGACTCTCTGGTGATGCCATAGGAACATTTGGCC...CTTGCACGTCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCAGCCCCTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CCA 90 bp | GACAGCTGGAGTTATCTAGAGAGAAGCAGTATGGGAAGGAAGGGGCTGCATCCTCAGGGGACACGAGGGTaGCTCCCCCGGGCTTCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: DSWSYLERSSMGRKGLHPQGTRG*LPRASG Trigger: ACCCGAAGCCCGGGGGAGCCACCCTCGTGTCCCCTG...AGGATGCAGCCCCTTCCTTCCCATACTGCTTCTCTCTAGATAACTCCAGCTGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR TCA 90 bp | AGGAAGGGGCTGCATCCTCCCAGCCTGGCAGAGAGCGAGCCAGGGACGTGCAAGTCTTCAGGGAAACAGTaGACCAGTGATCCCATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RKGLHPPSLAESEPGTCKSSGKQ*TSDPIW Trigger: CCAAATGGGATCACTGGTTCACTGTTTCCCTGAAGA...CTTGCACGTCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCAGCCCCTTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR TCA 90 bp | CAGCTGGAGTTATCTAGAGAGAAGCAGTATGGGAAGGAAGGGGCTGCATCCTCCGGGTGTGGCAGCAGGTaGGCCGGCCACCATGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QLELSREKQYGKEGAASSGCGSR*AGHHVC Trigger: ACAGACATGGTGGCCGGCTCACCTGCTGCCACACCC...GGAGGATGCAGCCCCTTCCTTCCCATACTGCTTCTCTCTAGATAACTCCAGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR GCA 90 bp | AAGGAAGGGGCTGCATCCTCCCAGCCTGGCAGAGAGCGAGCCAGGGACGTGCAAACCATCGCAGCCTCTTaGAGTCTCTTCCAGAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: KEGAASSQPGRERARDVQTIAAS*SLFQRF Trigger: GAATCTCTGGAAGAGACTGCAAGAGGCTGCGATGGT...TTGCACGTCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCAGCCCCTTCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CCA 90 bp | ACTTTTACAACCTCGCTCCCATGGTGCAGGGGGATGACAGTCATGGGAAGGTGGCATGAGAAAGGGCAGTaGGGAGGGGAACCGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TFTTSLPWCRGMTVMGRWHEKGQ*GGEPAQ Trigger: CTGGGCCGGTTCCCCTCCCCACTGCCCTTTCTCATG...CCACCTTCCCATGACTGTCATCCCCCTGCACCATGGGAGCGAGGTTGTAAAAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000230058.2 |
||
| CDS-3UTR CCA 90 bp | GCTGCATCCTCCCAGCCTGGCAGAGAGCGAGCCAGGGACGTGCAAGACCCTATACACTGTTGTGGCTGGTaGGATCTGTCACTGGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: AASSQPGRERARDVQDPIHCCGW*DLSLEQ Trigger: CTGTTCCAGTGACAGATCCCACCAGCCACAACAGTG...TATAGGGTCTTGCACGTCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR TCA 90 bp | GGGAAGGAAGGGGCTGCATCCTCCCAGCCTGGCAGAGAGCGAGCCAGGGACGTGAGACAAGATCTCTGCTaGCAGAAAATATCTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GKEGAASSQPGRERARDVRQDLC*QKISQP Trigger: AGGCTGAGATATTTTCTGTCAGCAGAGATCTTGTCT...CACGTCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCAGCCCCTTCCTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
||
| CDS-3UTR CCA 90 bp | TCTGCTGGTGGCCGTACTGCTTGGACTGGGAAAGGTGGAAGGATTCCAACATTGCATGAGAAAGGGCAGTaGGGAGGGGAACCGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SAGGRTAWTGKGGRIPTLHEKGQ*GGEPAQ Trigger: CTGGGCCGGTTCCCCTCCCCACTGCCCTTTCTCATG...CAATGTTGGAATCCTTCCACCTTTCCCAGTCCAAGCAGTACGGCCACCAGCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
||
| CDS-3UTR CCA 90 bp | GGAAGGTGGAAGCGCAGGCGATACTGGCTCTTCCTCATCTCCTCCTTGCCCTGGCTTCTGGGATCCACCTaGTTGGGCCATCTTTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GRWKRRRYWLFLISSLPWLLGST*LGHLLR Trigger: CCTCAAAAGATGGCCCAACCAGGTGGATCCCAGAAG...CCAGGGCAAGGAGGAGATGAGGAAGAGCCAGTATCGCCTGCGCTTCCACCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230058.2 |
||
| CDS-3UTR CCA 90 bp | GAGGTAAGGCAGAGCATACACACTGACCCAGCGCCCATCAGAGGAGGCAAGGCAGAAGTCTCCTTCTTCTaGGATCCACCTGGTTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: EVRQSIHTDPAPIRGGKAEVSFF*DPPGWA Trigger: GGCCCAACCAGGTGGATCCCAGAAGAAGGAGACTTC...TGCCTTGCCTCCTCTGATGGGCGCTGGGTCAGTGTGTATGCTCTGCCTTACCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
||
| CDS-3UTR CCA 90 bp | GAGCCACAAGACAGCTGGAGTTATCTAGAGAGAAGCAGTATGGGAAGGAAGGGGGCCTGCTCTCGCCGCTaGTACACCAGGGCTTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: EPQDSWSYLERSSMGRKGACSRR*YTRASA Trigger: GGCTGAAGCCCTGGTGTACCAGCGGCGAGAGCAGGC...CCCCTTCCTTCCCATACTGCTTCTCTCTAGATAACTCCAGCTGTCTTGTGGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| 3UTR CAA 72 bp | GAGGTGGAGGAAAGGGGCTTCAGGGAGGTAGACCAGTaGGAGGGTGATTGTCCCACGGAAACCATGGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EVEERGFREVDQ*EGDCPTETMER Trigger: CCTCTCCATGGTTTCCGTGGGACAATCACCCTCCAACTGGTCTACCTCCCTGAAGCCCCTTTCCTCCACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
||
| CDS-3UTR TCA 90 bp | CAGTCATGGGAAGGTGGAAGCGCAGGCGATACTGGCTCTTCCTCATCTCCTCCTGGTTGGGCCATCTTTTaGGGTTTGGGGCTCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QSWEGGSAGDTGSSSSPPGWAIF*GLGLSP Trigger: AGGAGAGAGCCCCAAACCTCAAAAGATGGCCCAACC...AGGAGGAGATGAGGAAGAGCCAGTATCGCCTGCGCTTCCACCTTCCCATGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230058.2 |
||
| CDS-3UTR TCA 90 bp | GACAGCTGGAGTTATCTAGAGAGAAGCAGTATGGGAAGGAAGGGGCTGCATCCTAGAGTCTCCAAGCCTTaGCATCCCGGTCCTGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: DSWSYLERSSMGRKGLHPRVSKP*HPGPGP Trigger: CGGGCCAGGACCGGGATGTCAAGGCTTGGAGACTCT...AGGATGCAGCCCCTTCCTTCCCATACTGCTTCTCTCTAGATAACTCCAGCTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR GCA 90 bp | AAGGAAGGGGCTGCATCCTCCCAGCCTGGCAGAGAGCGAGCCAGGGACGTGCAAGTTTCTCGGGTTCTTTaGCTGGCAGTATTATCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KEGAASSQPGRERARDVQVSRVL*LAVLSA Trigger: TGCTGATAATACTGCCAGGCAAAGAACCCGAGAAAC...TTGCACGTCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCAGCCCCTTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR GCA 90 bp | GCTGCATCCTCCCAGCCTGGCAGAGAGCGAGCCAGGGACGTGCAAGACCCTATAAGCCTGACCAGCTTATaGCAGAAACAGAAGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: AASSQPGRERARDVQDPISLTSL*QKQKTQ Trigger: CTGTGTCTTCTGTTTCTGGCATAAGCTGGTCAGGCT...TATAGGGTCTTGCACGTCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
||
| CDS-3UTR CCA 90 bp | CAGTCATGGGAAGGTGGAAGCGCAGGCGATACTGGCTCTTCCTCATCTCCTCCTGAAGTCTCCTTCTTCTaGGATCCACCTGGTTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QSWEGGSAGDTGSSSSPPEVSFF*DPPGWA Trigger: GGCCCAACCAGGTGGATCCCAGAAGAAGGAGACTTC...AGGAGGAGATGAGGAAGAGCCAGTATCGCCTGCGCTTCCACCTTCCCATGACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230058.2 |
||
| CDS-3UTR CCA 90 bp | GGAAGGAAGGGGCTGCATCCTCCCAGCCTGGCAGAGAGCGAGCCAGGGACGTGCGCCTGTGTGATCTTTTaGAACGTGAAATTGGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: GRKGLHPPSLAESEPGTCACVIF*NVKLVI Trigger: AATCACCAATTTCACGTTCCAAAAGATCACACAGGC...GCACGTCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCAGCCCCTTCCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR TCA 90 bp | AGGGGGATGACAGTCATGGGAAGGTGGAAGCGCAGGCGATACTGGCTCTTCCTCCTTCTGCTGTCCAAGTaGCAAAGCCATTGCAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RGMTVMGRWKRRRYWLFLLLLSK*QSHCSL Trigger: CAGACTGCAATGGCTTTGTCACTTGGACAGCAGAAG...GAGGAAGAGCCAGTATCGCCTGCGCTTCCACCTTCCCATGACTGTCATCCCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230058.2 |
||
| CDS-3UTR GCA 90 bp | AGGGGGATGACAGTCATGGGAAGGTGGAAGCGCAGGCGATACTGGCTCTTCCTCGGCTCCATTCTCGTCTaGCTCCTTCTCAAACACCTT | + |
|
Preference number: 4 (lower is better) Translates to: RGMTVMGRWKRRRYWLFLGSILV*LLLKHL Trigger: AAGGTGTTTGAGAAGGAGGCAGACGAGAATGGAGCC...GAGGAAGAGCCAGTATCGCCTGCGCTTCCACCTTCCCATGACTGTCATCCCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230058.2 |
||
| CDS-3UTR CCA 90 bp | ATACACACTGACCCAGCGCCCATCAGAGGAGGCAAGGCAAGGTCACAGCAACCTCTTCTGGGATCCACCTaGTTGGGCCATCTTTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IHTDPAPIRGGKARSQQPLLGST*LGHLLR Trigger: CCTCAAAAGATGGCCCAACCAGGTGGATCCCAGAAG...AGGTTGCTGTGACCTTGCCTTGCCTCCTCTGATGGGCGCTGGGTCAGTGTGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
||
| CDS-3UTR CCA 90 bp | AAGGAAGGGGCTGCATCCTCCCAGCCTGGCAGAGAGCGAGCCAGGGACGTGCAACAGAAAGTTCCTGTCTaGACAGTAGTCAAAGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KEGAASSQPGRERARDVQQKVPV*TVVKAK Trigger: CTTTGCTTTGACTACTGTCCAGACAGGAACTTTCTG...TTGCACGTCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCAGCCCCTTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR TCA 90 bp | GAGCCACAAGACAGCTGGAGTTATCTAGAGAGAAGCAGTATGGGAAGGAAGGGGATGTCTGTGGGGATCTaGCCCCGGAAAGCCTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: EPQDSWSYLERSSMGRKGMSVGI*PRKASM Trigger: CATGGAGGCTTTCCGGGGTCAGATCCCCACAGACAT...CCCCTTCCTTCCCATACTGCTTCTCTCTAGATAACTCCAGCTGTCTTGTGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR GCA 90 bp | GCTGCATCCTCCCAGCCTGGCAGAGAGCGAGCCAGGGACGTGCAAGACCCTATATCTGATACTTGTCCATaGTCAGGATGTCCTCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: AASSQPGRERARDVQDPISDTCP*SGCPLY Trigger: ATACAGAGGACATCCTGAGCATGGACAAGTATCAGA...TATAGGGTCTTGCACGTCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR GCA 90 bp | GGGAAGGAAGGGGCTGCATCCTCCCAGCCTGGCAGAGAGCGAGCCAGGGACGTGTTGAAGTCTTGGGTATaGATATCTCTTTATCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GKEGAASSQPGRERARDVLKSWV*ISLYLS Trigger: TGAGAGATAAAGAGATATGCATACCCAAGACTTCAA...CACGTCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCAGCCCCTTCCTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CCA 90 bp | ATACACACTGACCCAGCGCCCATCAGAGGAGGCAAGGCAAGGTCACAGCAACCTCCATCTTTTGAGGTTTaGGGCTCTCTCCTGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IHTDPAPIRGGKARSQQPPSFEV*GSLLAS Trigger: AGAAGCCAGGAGAGAGCCCCAAACCTCAAAAGATGG...AGGTTGCTGTGACCTTGCCTTGCCTCCTCTGATGGGCGCTGGGTCAGTGTGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGTGGCCGTACTGCTTGGACTGGGAAAGGTGGAAGGATTCCAACATTGAGAAAGCGCAGGCGATACTaGCTCTTCCTCATCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AGGRTAWTGKGGRIPTLRKRRRY*LFLISS Trigger: GGAGGAGATGAGGAAGAGCCAGTATCGCCTGCGCTT...TCTCAATGTTGGAATCCTTCCACCTTTCCCAGTCCAAGCAGTACGGCCACCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
||
| CDS-3UTR CCA 90 bp | CAAGACAGCTGGAGTTATCTAGAGAGAAGCAGTATGGGAAGGAAGGGGCTGCATAGACACCTCTCCGACTaGTCCAGAGCCATGGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: QDSWSYLERSSMGRKGLHRHLSD*SRAMAV Trigger: GACGGCCATGGCTCTGGACCAGTCGGAGAGGTGTCT...ATGCAGCCCCTTCCTTCCCATACTGCTTCTCTCTAGATAACTCCAGCTGTCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CCA 90 bp | GACGTGCAAGACCCTATAGGTCCCCTGCTACAGAACAGAGAAAATAATGAACACAGAGGGAGGAGGGTGTaGCAGCAGGTGAGCCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DVQDPIGPLLQNRENNEHRGRRV*QQVSRP Trigger: TGGCCGGCTCACCTGCTGCCACACCCTCCTCCCTCT...GTGTTCATTATTTTCTCTGTTCTGTAGCAGGGGACCTATAGGGTCTTGCACGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| 3UTR CAA 72 bp | AGGCCAGGCAGGGTCTGTGCAGGCAAGTGGTGGAGTTaGACTGGCTTTTTAAGGTCTCCGATTTCCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RPGRVCAGKWWS*TGFLRSPISPS Trigger: AGAAGGGGAAATCGGAGACCTTAAAAAGCCAGTCAAACTCCACCACTTGCCTGCACAGACCCTGCCTGGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
||
| 3UTR CAA 72 bp | CTGTTGGATCGGCTTAAGGTCAGTGAAGGACAGGCATaGGTAGACCTGAGGAGAGATCTGGGAGCAGAACGG | + |
|
Preference number: 4 (lower is better) Translates to: LLDRLKVSEGQA*VDLRRDLGAER Trigger: CCGTTCTGCTCCCAGATCTCTCCTCAGGTCTACCAATGCCTGTCCTTCACTGACCTTAAGCCGATCCAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
||
| CDS-3UTR CCA 90 bp | GACGTGCAAGACCCTATAGGTCCCCTGCTACAGAACAGAGAAAATAATGAACACCATGAGAAAGGGCAGTaGGGAGGGGAACCGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DVQDPIGPLLQNRENNEHHEKGQ*GGEPAQ Trigger: CTGGGCCGGTTCCCCTCCCCACTGCCCTTTCTCATG...GTGTTCATTATTTTCTCTGTTCTGTAGCAGGGGACCTATAGGGTCTTGCACGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CCA 90 bp | CAGCTGGAGTTATCTAGAGAGAAGCAGTATGGGAAGGAAGGGGCTGCATCCTCCCTTCTGGGATCCACCTaGTTGGGCCATCTTTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QLELSREKQYGKEGAASSLLGST*LGHLLR Trigger: CCTCAAAAGATGGCCCAACCAGGTGGATCCCAGAAG...GGAGGATGCAGCCCCTTCCTTCCCATACTGCTTCTCTCTAGATAACTCCAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR TCA 90 bp | CAAGACAGCTGGAGTTATCTAGAGAGAAGCAGTATGGGAAGGAAGGGGCTGCATGGATCCCATCTTTGGTaGCAGTCAGGAAACGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QDSWSYLERSSMGRKGLHGSHLW*QSGNAP Trigger: TGGGGCGTTTCCTGACTGTCACCAAAGATGGGATCC...ATGCAGCCCCTTCCTTCCCATACTGCTTCTCTCTAGATAACTCCAGCTGTCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR TCA 90 bp | GAGCCACAAGACAGCTGGAGTTATCTAGAGAGAAGCAGTATGGGAAGGAAGGGGCCACGTTGTCAGAGATaGAGATGGTGGCATTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: EPQDSWSYLERSSMGRKGPRCQR*RWWHCP Trigger: AGGGCAATGCCACCATCTTCATCTCTGACAACGTGG...CCCCTTCCTTCCCATACTGCTTCTCTCTAGATAACTCCAGCTGTCTTGTGGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR GCA 90 bp | GCTGGTGGCCGTACTGCTTGGACTGGGAAAGGTGGAAGGATTCCAACATTGAGAGGCTCCATTCTCGTCTaGCTCCTTCTCAAACACCTT | + |
|
Preference number: 4 (lower is better) Translates to: AGGRTAWTGKGGRIPTLRGSILV*LLLKHL Trigger: AAGGTGTTTGAGAAGGAGGCAGACGAGAATGGAGCC...TCTCAATGTTGGAATCCTTCCACCTTTCCCAGTCCAAGCAGTACGGCCACCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
||
| CDS-3UTR GCA 90 bp | CCATTTGTAGCTAGAGGGACCTTCAGAGGAAGTGTGCTAAGCAACAGGAGGCTTGCATCTCTTCCGACATaGTGCTCAGCACCCCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PFVARGTFRGSVLSNRRLASLPT*CSAPPS Trigger: TGAAGGGGGTGCTGAGCAGCATGTCGGAAGAGATGC...AAGCCTCCTGTTGCTTAGCACACTTCCTCTGAAGGTCCCTCTAGCTACAAATGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
||
| CDS-3UTR CCA 90 bp | GACAGCTGGAGTTATCTAGAGAGAAGCAGTATGGGAAGGAAGGGGCTGCATCCTTGTGTCACCGATGTCTaGTGTCCCTTCATCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: DSWSYLERSSMGRKGLHPCVTDV*CPFISH Trigger: GTGGCTGATGAAGGGACACCAGACATCGGTGACACA...AGGATGCAGCCCCTTCCTTCCCATACTGCTTCTCTCTAGATAACTCCAGCTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CCA 90 bp | CAAGACAGCTGGAGTTATCTAGAGAGAAGCAGTATGGGAAGGAAGGGGCTGCATCCACTCTGTCCGGGTTaGGAAAGGTCATCAGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: QDSWSYLERSSMGRKGLHPLCPG*ERSSGT Trigger: AGTGCCTGATGACCTTTCCCAACCCGGACAGAGTGG...ATGCAGCCCCTTCCTTCCCATACTGCTTCTCTCTAGATAACTCCAGCTGTCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CCA 90 bp | GTCCCCTGCTACAGAACAGAGAAAATAATGAACACCTCAACACATGAGGTGGGAGTCCCACGGAAACCATaGAGAGGGAGGAGGGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VPCYRTEKIMNTSTHEVGVPRKP*RGRRVW Trigger: CCACACCCTCCTCCCTCTCCATGGTTTCCGTGGGAC...TCCCACCTCATGTGTTGAGGTGTTCATTATTTTCTCTGTTCTGTAGCAGGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR TCA 90 bp | ACCTCGCTCCCATGGTGCCTTTGTCATCATGACCACCTACAGATTGTGAAGGGCCATACTTCTGCCAAGTaGCAAAGCCATTGCAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TSLPWCLCHHDHLQIVKGHTSAK*QSHCSL Trigger: CAGACTGCAATGGCTTTGTCACTTGGCAGAAGTATG...GCCCTTCACAATCTGTAGGTGGTCATGATGACAAAGGCACCATGGGAGCGAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
||
| CDS-3UTR GCA 90 bp | GACAGCTGGAGTTATCTAGAGAGAAGCAGTATGGGAAGGAAGGGGCTGCATCCTCTGCAGCTTGGACCATaGCTCAGTTTCTTTCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DSWSYLERSSMGRKGLHPLQLGP*LSFFLS Trigger: GCTGAGAAAGAAACTGAGGCATGGTCCAAGCTGCAG...AGGATGCAGCCCCTTCCTTCCCATACTGCTTCTCTCTAGATAACTCCAGCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CCA 90 bp | CCCTGCTACAGAACAGAGAAAATAATGAACACCTCAACACATGAGGTGGGAGCTACAACCTCGCTCCCATaGTGCAGGGGGATGACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PCYRTEKIMNTSTHEVGATTSLP*CRGMTV Trigger: GACTGTCATCCCCCTGCACCATGGGAGCGAGGTTGT...AGCTCCCACCTCATGTGTTGAGGTGTTCATTATTTTCTCTGTTCTGTAGCAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CCA 90 bp | CAAGACAGCTGGAGTTATCTAGAGAGAAGCAGTATGGGAAGGAAGGGGCTGCATACCAGTGATCCCATTTaGAGGCCCGGGGAAGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: QDSWSYLERSSMGRKGLHTSDPI*RPGEGF Trigger: AAATCCTTCCCCGGGCCTCCAAATGGGATCACTGGT...ATGCAGCCCCTTCCTTCCCATACTGCTTCTCTCTAGATAACTCCAGCTGTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CCA 90 bp | CAAGACAGCTGGAGTTATCTAGAGAGAAGCAGTATGGGAAGGAAGGGGCTGCATGCACTGACCACCAGCTaGAAGGAGTTCACATACAGG | + |
|
Preference number: 4 (lower is better) Translates to: QDSWSYLERSSMGRKGLHALTTS*KEFTYR Trigger: CCTGTATGTGAACTCCTTCCAGCTGGTGGTCAGTGC...ATGCAGCCCCTTCCTTCCCATACTGCTTCTCTCTAGATAACTCCAGCTGTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| 3UTR CAA 72 bp | TTCAGCTCAGTGGAGGCAACTGCAATGAGGCTCATGTaGTGCAGATATGCCACGTCGATAACCCACATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FSSVEATAMRLM*CRYATSITHIC Trigger: GCAGATGTGGGTTATCGACGTGGCATATCTGCACAACATGAGCCTCATTGCAGTTGCCTCCACTGAGCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
||
| CDS-3UTR TCA 90 bp | TCTGCAGGGAGACATTTCAAAAGTCCATTTGTAGCTAGAGGGACCTTCAGAGGAGGTTGGGCCATCTTTTaGGGTTTGGGGCTCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SAGRHFKSPFVARGTFRGGWAIF*GLGLSP Trigger: AGGAGAGAGCCCCAAACCTCAAAAGATGGCCCAACC...TCCTCTGAAGGTCCCTCTAGCTACAAATGGACTTTTGAAATGTCTCCCTGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
||
| CDS-3UTR TCA 90 bp | CAAGACAGCTGGAGTTATCTAGAGAGAAGCAGTATGGGAAGGAAGGGGCTGCATACTCAAGATGGGCTTTaGCGTGCTGACGTTCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QDSWSYLERSSMGRKGLHTQDGL*RADVPE Trigger: TTCTGGAACGTCAGCACGTCAAAGCCCATCTTGAGT...ATGCAGCCCCTTCCTTCCCATACTGCTTCTCTCTAGATAACTCCAGCTGTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CCA 90 bp | GTCCCCTGCTACAGAACAGAGAAAATAATGAACACCTCAACACATGAGGTGGGAAAGCGCAGGCGATACTaGCTCTTCCTCATCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VPCYRTEKIMNTSTHEVGKRRRY*LFLISS Trigger: GGAGGAGATGAGGAAGAGCCAGTATCGCCTGCGCTT...TCCCACCTCATGTGTTGAGGTGTTCATTATTTTCTCTGTTCTGTAGCAGGGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CCA 90 bp | TCTGCAGGGAGACATTTCAAAAGTCCATTTGTAGCTAGAGGGACCTTCAGAGGAACAGTCATGGGAAGGTaGAAGCGCAGGCGATACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SAGRHFKSPFVARGTFRGTVMGR*KRRRYW Trigger: CCAGTATCGCCTGCGCTTCCACCTTCCCATGACTGT...TCCTCTGAAGGTCCCTCTAGCTACAAATGGACTTTTGAAATGTCTCCCTGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
||
| CDS-3UTR CCA 90 bp | GACCCTATAGGTCCCCTGCTACAGAACAGAGAAAATAATGAACACCTCAACACAACCCACATCTGCTGGTaGCCGTACTGCTTGGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: DPIGPLLQNRENNEHLNTTHICW*PYCLDW Trigger: CCAGTCCAAGCAGTACGGCCACCAGCAGATGTGGGT...TGTGTTGAGGTGTTCATTATTTTCTCTGTTCTGTAGCAGGGGACCTATAGGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CCA 90 bp | CAAGACAGCTGGAGTTATCTAGAGAGAAGCAGTATGGGAAGGAAGGGGCTGCATAAGACACAGACAGAATaGGGTCTGCTGGTCTCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: QDSWSYLERSSMGRKGLHKTQTE*GLLVSD Trigger: ATCGGAGACCAGCAGACCCCATTCTGTCTGTGTCTT...ATGCAGCCCCTTCCTTCCCATACTGCTTCTCTCTAGATAACTCCAGCTGTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
||
| 3UTR CAA 72 bp | GAGAAGGTCTCAGACCAGAACTGCAGGATCCCATCTTaGGTGACAGTCAGGAAACGCCCCATCTTTTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: EKVSDQNCRIPS*VTVRKRPIFLN Trigger: GTTCAAAAAGATGGGGCGTTTCCTGACTGTCACCAAAGATGGGATCCTGCAGTTCTGGTCTGAGACCTTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
||
| CDS-3UTR TCA 90 bp | GACCCTATAGGTCCCCTGCTACAGAACAGAGAAAATAATGAACACCTCAACACAGGTTGGGCCATCTTTTaGGGTTTGGGGCTCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DPIGPLLQNRENNEHLNTGWAIF*GLGLSP Trigger: AGGAGAGAGCCCCAAACCTCAAAAGATGGCCCAACC...TGTGTTGAGGTGTTCATTATTTTCTCTGTTCTGTAGCAGGGGACCTATAGGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR TCA 90 bp | CAAGACCCTATAGGTCCCCTGCTACAGAACAGAGAAAATAATGAACACCTCAACGAAACAGTGAACCAGTaGTCCCATTTGGAGGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: QDPIGPLLQNRENNEHLNETVNQ*SHLEAR Trigger: CCGGGCCTCCAAATGGGATCACTGGTTCACTGTTTC...GTTGAGGTGTTCATTATTTTCTCTGTTCTGTAGCAGGGGACCTATAGGGTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR TCA 90 bp | GACGTGCAAGACCCTATAGGTCCCCTGCTACAGAACAGAGAAAATAATGAACACTGTAGGTGCTACAGATaGGGGTGCTGCTCCTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: DVQDPIGPLLQNRENNEHCRCYR*GCCSCR Trigger: TCTACAGGAGCAGCACCCTCATCTGTAGCACCTACA...GTGTTCATTATTTTCTCTGTTCTGTAGCAGGGGACCTATAGGGTCTTGCACGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR TCA 90 bp | GACCCTATAGGTCCCCTGCTACAGAACAGAGAAAATAATGAACACCTCAACACAAGGCTGATGAAGGCCTaGGGAAGGAGGTGGAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: DPIGPLLQNRENNEHLNTRLMKA*GRRWRK Trigger: TTTCCTCCACCTCCTTCCTCAGGCCTTCATCAGCCT...TGTGTTGAGGTGTTCATTATTTTCTCTGTTCTGTAGCAGGGGACCTATAGGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR GCA 90 bp | GTCCCCTGCTACAGAACAGAGAAAATAATGAACACCTCAACACATGAGGTGGGATCCTCATCTCCTCCTTaGCCTGGAACTCACGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: VPCYRTEKIMNTSTHEVGSSSPP*PGTHAS Trigger: TGATGCGTGAGTTCCAGGGCAAGGAGGAGATGAGGA...TCCCACCTCATGTGTTGAGGTGTTCATTATTTTCTCTGTTCTGTAGCAGGGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR GCA 90 bp | ACTTTTACAACCTCGCTCCCATGGTGCCTTTGTCATCATGACCACCTACAGATTTCCTCATCTCCTCCTTaGCCTGGAACTCACGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: TFTTSLPWCLCHHDHLQISSSPP*PGTHAS Trigger: TGATGCGTGAGTTCCAGGGCAAGGAGGAGATGAGGA...AATCTGTAGGTGGTCATGATGACAAAGGCACCATGGGAGCGAGGTTGTAAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
||
| CDS-3UTR GCA 90 bp | CAAGACAGCTGGAGTTATCTAGAGAGAAGCAGTATGGGAAGGAAGGGGCTGCATCTTCCAGGGCCTGTGTaGCCACTTTTGATCTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: QDSWSYLERSSMGRKGLHLPGPV*PLLIFI Trigger: TATGAAGATCAAAAGTGGGCACACAGGCCCTGGAAG...ATGCAGCCCCTTCCTTCCCATACTGCTTCTCTCTAGATAACTCCAGCTGTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR GCA 90 bp | CAAGACCCTATAGGTCCCCTGCTACAGAACAGAGAAAATAATGAACACCTCAACAGGCGGGGCCTGGTCTaGAGAAAAAGGATCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QDPIGPLLQNRENNEHLNRRGLV*RKRIFS Trigger: GGAGAAGATCCTTTTTCTGCAGACCAGGCCCCGCCT...GTTGAGGTGTTCATTATTTTCTCTGTTCTGTAGCAGGGGACCTATAGGGTCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR GCA 90 bp | CAAGACCCTATAGGTCCCCTGCTACAGAACAGAGAAAATAATGAACACCTCAACGTGAGGGACATCTGCTaGAGCTTGGACCATGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QDPIGPLLQNRENNEHLNVRDIC*SLDHAS Trigger: TGAGGCATGGTCCAAGCTGCAGCAGATGTCCCTCAC...GTTGAGGTGTTCATTATTTTCTCTGTTCTGTAGCAGGGGACCTATAGGGTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CCA 90 bp | GACCCTATAGGTCCCCTGCTACAGAACAGAGAAAATAATGAACACCTCAACACAACAGTCATGGGAAGGTaGAAGCGCAGGCGATACTGG | + |
|
Preference number: 4 (lower is better) Translates to: DPIGPLLQNRENNEHLNTTVMGR*KRRRYW Trigger: CCAGTATCGCCTGCGCTTCCACCTTCCCATGACTGT...TGTGTTGAGGTGTTCATTATTTTCTCTGTTCTGTAGCAGGGGACCTATAGGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CCA 90 bp | CAAGACCCTATAGGTCCCCTGCTACAGAACAGAGAAAATAATGAACACCTCAACGTTTTCAGGGGGCCCTaGGATTCCAGGTATCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QDPIGPLLQNRENNEHLNVFRGP*DSRYPL Trigger: CAGAGGATACCTGGAATCCCAGGGCCCCCTGAAAAC...GTTGAGGTGTTCATTATTTTCTCTGTTCTGTAGCAGGGGACCTATAGGGTCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CCA 90 bp | GTCCCCTGCTACAGAACAGAGAAAATAATGAACACCTCAACACATGAGGTGGGAAGTCGTTCTCATCAGTaGCCATGGCACCCACAACAC | + |
|
Preference number: 4 (lower is better) Translates to: VPCYRTEKIMNTSTHEVGSRSHQ*PWHPQH Trigger: GTGTTGTGGGTGCCATGGCCACTGATGAGAACGACT...TCCCACCTCATGTGTTGAGGTGTTCATTATTTTCTCTGTTCTGTAGCAGGGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR TCA 90 bp | GACCCTATAGGTCCCCTGCTACAGAACAGAGAAAATAATGAACACCTCAACACATCTTCTTGCCCGTGCTaGTGTCCCACACACTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: DPIGPLLQNRENNEHLNTSSCPC*CPTHSL Trigger: TAGTGAGTGTGTGGGACATCAGCACGGGCAAGAAGA...TGTGTTGAGGTGTTCATTATTTTCTCTGTTCTGTAGCAGGGGACCTATAGGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR GCA 90 bp | CCCTGCTACAGAACAGAGAAAATAATGAACACCTCAACACATGAGGTGGGAGCTGTCTCAGACCAGAACTaGAGGATCCCATCTTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PCYRTEKIMNTSTHEVGAVSDQN*RIPSLV Trigger: CACCAAAGATGGGATCCTGCAGTTCTGGTCTGAGAC...AGCTCCCACCTCATGTGTTGAGGTGTTCATTATTTTCTCTGTTCTGTAGCAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR GCA 90 bp | GTCCCCTGCTACAGAACAGAGAAAATAATGAACACCTCAACACATGAGGTGGGAGTCATAGCCACCAGTTaGCAGAAAGTTCCTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VPCYRTEKIMNTSTHEVGVIATS*QKVPVW Trigger: CCAGACAGGAACTTTCTGGCAACTGGTGGCTATGAC...TCCCACCTCATGTGTTGAGGTGTTCATTATTTTCTCTGTTCTGTAGCAGGGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR GCA 90 bp | GACCCTATAGGTCCCCTGCTACAGAACAGAGAAAATAATGAACACCTCAACACACTTGCTGTAGAGGACTaGACACAGGGGTGTGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: DPIGPLLQNRENNEHLNTLAVED*TQGCVV Trigger: CACAACACACCCCTGTGTGCAGTCCTCTACAGCAAG...TGTGTTGAGGTGTTCATTATTTTCTCTGTTCTGTAGCAGGGGACCTATAGGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR GCA 90 bp | GAGCCACAAGACAGCTGGAGTTATCTAGAGAGAAGCAGTATGGGAAGGAAGGGGATTCCTCTGTTGCTCTaGGTCCTTCCAATGTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: EPQDSWSYLERSSMGRKGIPLLL*VLPMFH Trigger: ATGAAACATTGGAAGGACGCAGAGCAACAGAGGAAT...CCCCTTCCTTCCCATACTGCTTCTCTCTAGATAACTCCAGCTGTCTTGTGGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR GCA 90 bp | CCCTGCTACAGAACAGAGAAAATAATGAACACCTCAACACATGAGGTGGGAGCTGAGCAGACCTGGAGTTaGTTAGGAATTAAGAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PCYRTEKIMNTSTHEVGAEQTWS*LGIKSR Trigger: CCGGCTCTTAATTCCTAAGCAACTCCAGGTCTGCTC...AGCTCCCACCTCATGTGTTGAGGTGTTCATTATTTTCTCTGTTCTGTAGCAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR GCA 90 bp | GACGTGCAAGACCCTATAGGTCCCCTGCTACAGAACAGAGAAAATAATGAACACCTTCTTCTCCAAACTTaGCCCCTGCTCCAGTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: DVQDPIGPLLQNRENNEHLLLQT*PLLQFI Trigger: GATGAACTGGAGCAGGGGGCAAGTTTGGAGAAGAAG...GTGTTCATTATTTTCTCTGTTCTGTAGCAGGGGACCTATAGGGTCTTGCACGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR GCA 90 bp | GACGTGCAAGACCCTATAGGTCCCCTGCTACAGAACAGAGAAAATAATGAACACCACCTTGGGCTTGTATaGTGCCCCCACAATTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DVQDPIGPLLQNRENNEHHLGLV*CPHNFA Trigger: AGCAAAATTGTGGGGGCAGCATACAAGCCCAAGGTG...GTGTTCATTATTTTCTCTGTTCTGTAGCAGGGGACCTATAGGGTCTTGCACGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000126656.4 ENSMUST00000175856.3 |
||
| CDS-3UTR CCA 90 bp | GACGTGCAAGACCCTATAGGTCCCCTGCTACAGAACAGAGAAAATAATGAACACTGTAGAAGTAGGTGCTaGTTATGGGGCAGTTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DVQDPIGPLLQNRENNEHCRSRC*LWGSCP Trigger: TGGGCAACTGCCCCATAACCAGCACCTACTTCTACA...GTGTTCATTATTTTCTCTGTTCTGTAGCAGGGGACCTATAGGGTCTTGCACGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CCA 90 bp | CAGCTGGAGTTATCTAGAGAGAAGCAGTATGGGAAGGAAGGGGCTGCATCCTCCAACACTTTGTTCATGTaGACAATCCCACTAATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QLELSREKQYGKEGAASSNTLFM*TIPLIS Trigger: GGAGATTAGTGGGATTGTCCACATGAACAAAGTGTT...GGAGGATGCAGCCCCTTCCTTCCCATACTGCTTCTCTCTAGATAACTCCAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR TCA 90 bp | ACTTTTACAACCTCGCTCCCATGGTGCCTTTGTCATCATGACCACCTACAGATTGCTGATCTCTTTGGTTaGTTTCACTGTTGTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TFTTSLPWCLCHHDHLQIADLFG*FHCCGW Trigger: CCAGCCACAACAGTGAAATCAACCAAAGAGATCAGC...AATCTGTAGGTGGTCATGATGACAAAGGCACCATGGGAGCGAGGTTGTAAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
||
| CDS-3UTR GCA 90 bp | CAAGACCCTATAGGTCCCCTGCTACAGAACAGAGAAAATAATGAACACCTCAACTCCTGTAGAAGTAGGTaGTGGTTATGGGGCAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QDPIGPLLQNRENNEHLNSCRSR*WLWGSC Trigger: GCAACTGCCCCATAACCAGCACCTACTTCTACAGGA...GTTGAGGTGTTCATTATTTTCTCTGTTCTGTAGCAGGGGACCTATAGGGTCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CCA 90 bp | GACCCTATAGGTCCCCTGCTACAGAACAGAGAAAATAATGAACACCTCAACACACTCGGGTTCTTTGCCTaGCAGTATTATCAGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: DPIGPLLQNRENNEHLNTLGFFA*QYYQHQ Trigger: CTGGTGCTGATAATACTGCCAGGCAAAGAACCCGAG...TGTGTTGAGGTGTTCATTATTTTCTCTGTTCTGTAGCAGGGGACCTATAGGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CCA 90 bp | GACGTGCAAGACCCTATAGGTCCCCTGCTACAGAACAGAGAAAATAATGAACACCCAGGTAATCAGAAGTaGTGGGGGAACCAGAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: DVQDPIGPLLQNRENNEHPGNQK*WGNQRK Trigger: TTTTCTCTGGTTCCCCCACCACTTCTGATTACCTGG...GTGTTCATTATTTTCTCTGTTCTGTAGCAGGGGACCTATAGGGTCTTGCACGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR TCA 90 bp | GACCCTATAGGTCCCCTGCTACAGAACAGAGAAAATAATGAACACCTCAACACAGCTGATCTCTTTGGTTaGTTTCACTGTTGTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DPIGPLLQNRENNEHLNTADLFG*FHCCGW Trigger: CCAGCCACAACAGTGAAATCAACCAAAGAGATCAGC...TGTGTTGAGGTGTTCATTATTTTCTCTGTTCTGTAGCAGGGGACCTATAGGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR TCA 90 bp | GACGTGCAAGACCCTATAGGTCCCCTGCTACAGAACAGAGAAAATAATGAACACGACAATCCAGGTTTGTaGCTCCTGAAATGTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DVQDPIGPLLQNRENNEHDNPGL*LLKCFS Trigger: GGAGAAACATTTCAGGAGTCACAAACCTGGATTGTC...GTGTTCATTATTTTCTCTGTTCTGTAGCAGGGGACCTATAGGGTCTTGCACGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CCA 90 bp | AGTCAAGGAAAGCTCTCTGGAGGAAGTAACACTTGTGTTGGTTCAAAAGAAAAGCACTGTTGTGGCTGGTaGGATCTGTCACTGGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: SQGKLSGGSNTCVGSKEKHCCGW*DLSLEQ Trigger: CTGTTCCAGTGACAGATCCCACCAGCCACAACAGTG...CTTTTCTTTTGAACCAACACAAGTGTTACTTCCTCCAGAGAGCTTTCCTTGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
||
| CDS-3UTR CCA 90 bp | GTCCCCTGCTACAGAACAGAGAAAATAATGAACACCTCAACACATGAGGTGGGATTGGACTGGGAAAGGTaGAAGGATTCCAACATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VPCYRTEKIMNTSTHEVGLDWER*KDSNIE Trigger: CTCAATGTTGGAATCCTTCCACCTTTCCCAGTCCAA...TCCCACCTCATGTGTTGAGGTGTTCATTATTTTCTCTGTTCTGTAGCAGGGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CCA 90 bp | GACCCTATAGGTCCCCTGCTACAGAACAGAGAAAATAATGAACACCTCAACACAGGTAATCAGAAGTGGTaGGGGAACCAGAGAAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: DPIGPLLQNRENNEHLNTGNQKW*GNQRKG Trigger: ACCTTTTCTCTGGTTCCCCCACCACTTCTGATTACC...TGTGTTGAGGTGTTCATTATTTTCTCTGTTCTGTAGCAGGGGACCTATAGGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS CCA 90 bp | TGCATCGTGCCGTCACGCAAGCCCGTGAGCAGACACCTCTCCGACTaGTCCAGAGCCATGGCCGTCAGCTCACTTTCCTGGATGCCGGAC | + |
|
Preference number: 5 (lower is better) Translates to: CIVPSRKPVSRHLSD*SRAMAVSSLSWMPD Trigger: GTCCGGCATCCAGGAAAGTGAGCTGACGGCCATGGCTCTGGACCAGTCGGAGAGGTGTCTGCTCACGGGCTTGCGTGACGGCACGATGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS CCA 90 bp | CACCTCTCCGACTGGTCCAGAGCCATGGCCGTCAGCTCACTTTCCTaGATGCCGGACACGGGTATCTCCATCCTCTTCTTGCCCGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HLSDWSRAMAVSSLS*MPDTGISILFLPVL Trigger: CAGCACGGGCAAGAAGAGGATGGAGATACCCGTGTCCGGCATCCAGGAAAGTGAGCTGACGGCCATGGCTCTGGACCAGTCGGAGAGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CAA 90 bp | AAGGAAGGGGCTGCATCCTCCCAGCCTGGCAGAGAGCGAGCCAGGGACGTGCAATTCCTCATCTCCTCCTaGCCCTGGAACTCACGCATC | + |
|
Preference number: 5 (lower is better) Translates to: KEGAASSQPGRERARDVQFLISS*PWNSRI Trigger: GATGCGTGAGTTCCAGGGCAAGGAGGAGATGAGGAA...TTGCACGTCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCAGCCCCTTCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CAA 90 bp | AAGGAAGGGGCTGCATCCTCCCAGCCTGGCAGAGAGCGAGCCAGGGACGTGCAAGCCACACAGGCTTTTTaGAGACCAGGGGGTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: KEGAASSQPGRERARDVQATQAF*RPGGST Trigger: TGTGGAACCCCCTGGTCTCAAAAAAGCCTGTGTGGC...TTGCACGTCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCAGCCCCTTCCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS TCA 90 bp | CCACGGCTGAACACGAGGCCACGACATTCAGCTGTGGGATGTACTTaGCCTGCTGGCACCAGTTGGGGTGGAGACCCTTCATGCGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: PRLNTRPRHSAVGCT*PAGTSWGGDPSCGS Trigger: GCTTCCGCATGAAGGGTCTCCACCCCAACTGGTGCCAGCAGGTCAAGTACATCCCACAGCTGAATGTCGTGGCCTCGTGTTCAGCCGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS CCA 90 bp | CTCCAAGCCTTGACATCCCGGTCCTGGCCCGCACTGACCACCAGCTaGAAGGAGTTCACATACAGGATGTCTGTCACGCTGTCCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LQALTSRSWPALTTS*KEFTYRMSVTLSRW Trigger: CCACCTGGACAGCGTGACAGACATCCTGTATGTGAACTCCTTCCAGCTGGTGGTCAGTGCGGGCCAGGACCGGGATGTCAAGGCTTGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CAA 90 bp | AGGAAGGGGCTGCATCCTCCCAGCCTGGCAGAGAGCGAGCCAGGGACGTGCAAGTGGTTGATTTCACTGTaGTGGCTGGTGGGATCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RKGLHPPSLAESEPGTCKWLISL*WLVGSV Trigger: GACAGATCCCACCAGCCACAACAGTGAAATCAACCA...CTTGCACGTCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCAGCCCCTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CAA 90 bp | AGGAAGGGGCTGCATCCTCCCAGCCTGGCAGAGAGCGAGCCAGGGACGTGCAAGGGAAGGATTCCAACATaGAGAAGGTCTCAGACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RKGLHPPSLAESEPGTCKGRIPT*RRSQTR Trigger: TCTGGTCTGAGACCTTCTCAATGTTGGAATCCTTCC...CTTGCACGTCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCAGCCCCTTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS CCA 90 bp | GCTCTCCCACGCAGAAAGGCTAACAGCACTGCCTGCTCTCGCCGCTaGTACACCAGGGCTTCAGCCAATTCCTTGTCCATCTCTAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ALPRRKANSTACSRR*YTRASANSLSISRK Trigger: CTTCCTAGAGATGGACAAGGAATTGGCTGAAGCCCTGGTGTACCAGCGGCGAGAGCAGGCAGTGCTGTTAGCCTTTCTGCGTGGGAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CAA 90 bp | GAGGTAAGGCAGAGCATACACACTGACCCAGCGCCCATCAGAGGAGGCAAGGCATTCCTCATCTCCTCCTaGCCCTGGAACTCACGCATC | + |
|
Preference number: 5 (lower is better) Translates to: EVRQSIHTDPAPIRGGKAFLISS*PWNSRI Trigger: GATGCGTGAGTTCCAGGGCAAGGAGGAGATGAGGAA...TGCCTTGCCTCCTCTGATGGGCGCTGGGTCAGTGTGTATGCTCTGCCTTACCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
||
| CDS-3UTR CAA 90 bp | GCTGCATCCTCCCAGCCTGGCAGAGAGCGAGCCAGGGACGTGCAAGACCCTATAGCTTCAGCCAATTCCTaGTCCATCTCTAGGAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: AASSQPGRERARDVQDPIASANS*SISRKE Trigger: CTCCTTCCTAGAGATGGACAAGGAATTGGCTGAAGC...TATAGGGTCTTGCACGTCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS GCA 90 bp | GCTGAACACGAGGCCACGACATTCAGCTGTGGGATGTACTTGACCTaGTGGCACCAGTTGGGGTGGAGACCCTTCATGCGGAAGCTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: AEHEATTFSCGMYLT*WHQLGWRPFMRKLL Trigger: TAGAAGCTTCCGCATGAAGGGTCTCCACCCCAACTGGTGCCAGCAGGTCAAGTACATCCCACAGCTGAATGTCGTGGCCTCGTGTTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS GCA 90 bp | GTTTCTTTCTCAGCTCTCCCACGCAGAAAGGCTAACAGCACTGCCTaGTCTCGCCGCTGGTACACCAGGGCTTCAGCCAATTCCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VSFSALPRRKANSTA*SRRWYTRASANSLS Trigger: GGACAAGGAATTGGCTGAAGCCCTGGTGTACCAGCGGCGAGAGCAGGCAGTGCTGTTAGCCTTTCTGCGTGGGAGAGCTGAGAAAGAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS CCA 90 bp | TGCAGGGGGATGACAGTCATGGGAAGGTGGAAGCGCAGGCGATACTaGCTCTTCCTCATCTCCTCCTTGCCCTGGAACTCACGCATCATA | + |
|
Preference number: 5 (lower is better) Translates to: CRGMTVMGRWKRRRY*LFLISSLPWNSRII Trigger: TATGATGCGTGAGTTCCAGGGCAAGGAGGAGATGAGGAAGAGCCAGTATCGCCTGCGCTTCCACCTTCCCATGACTGTCATCCCCCTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
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| CDS-3UTR CAA 90 bp | AGGCAGGGTCTGTGCAGGCAAGTGGTGGAGTTTGACTGGCTTTTTAAGGTCTCCTTCCGAACACGCACCTaGGGCTTGTATGCTGCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: RQGLCRQVVEFDWLFKVSFRTRT*GLYAAP Trigger: GGGGGCAGCATACAAGCCCAAGGTGCGTGTTCGGAA...GGAGACCTTAAAAAGCCAGTCAAACTCCACCACTTGCCTGCACAGACCCTGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
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| CDS CCA 90 bp | GAACACGAGGCCACGACATTCAGCTGTGGGATGTACTTGACCTGCTaGCACCAGTTGGGGTGGAGACCCTTCATGCGGAAGCTTCTATAC | + |
|
Preference number: 5 (lower is better) Translates to: EHEATTFSCGMYLTC*HQLGWRPFMRKLLY Trigger: GTATAGAAGCTTCCGCATGAAGGGTCTCCACCCCAACTGGTGCCAGCAGGTCAAGTACATCCCACAGCTGAATGTCGTGGCCTCGTGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
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| CDS CCA 90 bp | TACAGGGGGATGACAGTCATGGGAAGGTGGAAGCGCAGGCGATACTaGCTCTTCCTCATCTCCTCCTTGCCCTGGAACTCACGCATCATA | + |
|
Preference number: 5 (lower is better) Translates to: YRGMTVMGRWKRRRY*LFLISSLPWNSRII Trigger: TATGATGCGTGAGTTCCAGGGCAAGGAGGAGATGAGGAAGAGCCAGTATCGCCTGCGCTTCCACCTTCCCATGACTGTCATCCCCCTGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
||
| CDS CCA 90 bp | CCAGAAACAGAAGACACAGACAGAATGGGGTCTGCTGGTCTCCGATaGCCCAGACATCTCAGAAGCAACACCTCGCTTCCTCACCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PETEDTDRMGSAGLR*PRHLRSNTSLPHLL Trigger: CAGCAGGTGAGGAAGCGAGGTGTTGCTTCTGAGATGTCTGGGCCATCGGAGACCAGCAGACCCCATTCTGTCTGTGTCTTCTGTTTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
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| CDS-3UTR CAA 90 bp | GCTGCATCCTCCCAGCCTGGCAGAGAGCGAGCCAGGGACGTGCAAGACCCTATACGCCTGTGTGATCTTTaGGAACGTGAAATTGGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: AASSQPGRERARDVQDPIRLCDL*EREIGD Trigger: ATCACCAATTTCACGTTCCAAAAGATCACACAGGCG...TATAGGGTCTTGCACGTCCCTGGCTCGCTCTCTGCCAGGCTGGGAGGATGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS CCA 90 bp | GAAAAGGTCTGTCCTTCCACAACCTCCTTCTCCTCCTGTGGCAAGTaGTGCTCGGAGCAGACCTGGAGTTGCTTAGGAATTAAGAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: EKVCPSTTSFSSCGK*CSEQTWSCLGIKSR Trigger: CCGGCTCTTAATTCCTAAGCAACTCCAGGTCTGCTCCGAGCACCACTTGCCACAGGAGGAGAAGGAGGTTGTGGAAGGACAGACCTTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS CCA 90 bp | GTCTGTCACGCTGTCCAGGTGGCTGTTCCAGGTAATCAGAAGTGGTaGGGGAACCAGAGAAAAGGTCTGTCCTTCCACAACCTCCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: VCHAVQVAVPGNQKW*GNQRKGLSFHNLLL Trigger: GAGAAGGAGGTTGTGGAAGGACAGACCTTTTCTCTGGTTCCCCCACCACTTCTGATTACCTGGAACAGCCACCTGGACAGCGTGACAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CAA 90 bp | ATACACACTGACCCAGCGCCCATCAGAGGAGGCAAGGCAAGGTCACAGCAACCTTGGTTGATTTCACTGTaGTGGCTGGTGGGATCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: IHTDPAPIRGGKARSQQPWLISL*WLVGSV Trigger: GACAGATCCCACCAGCCACAACAGTGAAATCAACCA...AGGTTGCTGTGACCTTGCCTTGCCTCCTCTGATGGGCGCTGGGTCAGTGTGTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
||
| CDS-3UTR CAA 90 bp | CAAGACAGCTGGAGTTATCTAGAGAGAAGCAGTATGGGAAGGAAGGGGCTGCATTTCCGAACACGCACCTaGGGCTTGTATGCTGCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: QDSWSYLERSSMGRKGLHFRTRT*GLYAAP Trigger: GGGGGCAGCATACAAGCCCAAGGTGCGTGTTCGGAA...ATGCAGCCCCTTCCTTCCCATACTGCTTCTCTCTAGATAACTCCAGCTGTCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126656.4 ENSMUST00000175856.3 |
||
| CDS TCA 90 bp | TTTGCCTGGCAGTATTATCAGCACCAGAGAGGACTTCTCCACGGCTaGACACGAGGCCACGACATTCAGCTGTGGGATGTACTTGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: FAWQYYQHQRGLLHG*TRGHDIQLWDVLDL Trigger: CAGGTCAAGTACATCCCACAGCTGAATGTCGTGGCCTCGTGTTCAGCCGTGGAGAAGTCCTCTCTGGTGCTGATAATACTGCCAGGCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS GCA 90 bp | GAGGCAGCCACTCACCACCTGCTTAAAGATCTTGCTGTAGAGGACTaGACACAGGGGTGTGTTGTGAGTCGTCATCCTCCCTGTTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: EAATHHLLKDLAVED*TQGCVVSRHPPCFQ Trigger: CTGAAAACAGGGAGGATGACGACTCACAACACACCCCTGTGTGCAGTCCTCTACAGCAAGATCTTTAAGCAGGTGGTGAGTGGCTGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS CCA 90 bp | ACATTCAGCTGTGGGATGTACTTGACCTGCTGGCACCAGTTGGGGTaGAGACCCTTCATGCGGAAGCTTCTATACAGAGGAGCCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TFSCGMYLTCWHQLG*RPFMRKLLYRGAFS Trigger: TGAGAAGGCTCCTCTGTATAGAAGCTTCCGCATGAAGGGTCTCCACCCCAACTGGTGCCAGCAGGTCAAGTACATCCCACAGCTGAATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS CCA 90 bp | GATGTCTGTCACGCTGTCCAGGTGGCTGTTCCAGGTAATCAGAAGTaGTGGGGGAACCAGAGAAAAGGTCTGTCCTTCCACAACCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: DVCHAVQVAVPGNQK*WGNQRKGLSFHNLL Trigger: AAGGAGGTTGTGGAAGGACAGACCTTTTCTCTGGTTCCCCCACCACTTCTGATTACCTGGAACAGCCACCTGGACAGCGTGACAGACATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
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| CDS CCA 90 bp | AGTCCAGCTCTCCTCGATGTCTTCAACAGAAGGCGATTTGGTCCATaGAGATGTGAGGGACATCTGCTGCAGCTTGGACCATGCCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SPALLDVFNRRRFGP*RCEGHLLQLGPCLS Trigger: ACTGAGGCATGGTCCAAGCTGCAGCAGATGTCCCTCACATCTCCATGGACCAAATCGCCTTCTGTTGAAGACATCGAGGAGAGCTGGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
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| CDS-3UTR CAA 90 bp | CATGCCACTTTTACAACCTCGCTCCCATGGTGCAGGGGGATGACAGTCATGGGATGGTTGATTTCACTGTaGTGGCTGGTGGGATCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: HATFTTSLPWCRGMTVMGWLISL*WLVGSV Trigger: GACAGATCCCACCAGCCACAACAGTGAAATCAACCA...TCCCATGACTGTCATCCCCCTGCACCATGGGAGCGAGGTTGTAAAAGTGGCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230058.2 |
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| CDS-3UTR CAA 90 bp | CATGCCACTTTTACAACCTCGCTCCCATGGTGCAGGGGGATGACAGTCATGGGACAAGTGACAAAGCCATaGCAGTCTGAGTCCACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HATFTTSLPWCRGMTVMGQVTKP*QSESTF Trigger: GAAGGTGGACTCAGACTGCAATGGCTTTGTCACTTG...TCCCATGACTGTCATCCCCCTGCACCATGGGAGCGAGGTTGTAAAAGTGGCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230058.2 |
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| CDS-3UTR CAA 90 bp | GACGTGCAAGACCCTATAGGTCCCCTGCTACAGAACAGAGAAAATAATGAACACGAGAGTCTCCAAGCCTaGACATCCCGGTCCTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: DVQDPIGPLLQNRENNEHESLQA*TSRSWP Trigger: GGGCCAGGACCGGGATGTCAAGGCTTGGAGACTCTC...GTGTTCATTATTTTCTCTGTTCTGTAGCAGGGGACCTATAGGGTCTTGCACGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
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| CDS GCA 90 bp | GAAGGTGGAAGCGCAGGCGATACTGGCTCTTCCTCATCTCCTCCTTaGCCTGGAACTCACGCATCATATAATCCACATACTTCTGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: EGGSAGDTGSSSSPP*PGTHASYNPHTSAK Trigger: CTTGGCAGAAGTATGTGGATTATATGATGCGTGAGTTCCAGGGCAAGGAGGAGATGAGGAAGAGCCAGTATCGCCTGCGCTTCCACCTTC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126656.4 ENSMUST00000144827.2 |
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| CDS GCA 90 bp | TCCAAACTTGCCCCCTGCTCCAGTTCATCCACCATCGCAGCCTCTTaGAGTCTCTTCCAGAGATTCAGGCCAAATGTTCCTATGGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: SKLAPCSSSSTIAAS*SLFQRFRPNVPMAS Trigger: TGATGCCATAGGAACATTTGGCCTGAATCTCTGGAAGAGACTGCAAGAGGCTGCGATGGTGGATGAACTGGAGCAGGGGGCAAGTTTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
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| CDS CCA 90 bp | AGCTGGAAGGAGTTCACATACAGGATGTCTGTCACGCTGTCCAGGTaGCTGTTCCAGGTAATCAGAAGTGGTGGGGGAACCAGAGAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SWKEFTYRMSVTLSR*LFQVIRSGGGTREK Trigger: CTTTTCTCTGGTTCCCCCACCACTTCTGATTACCTGGAACAGCCACCTGGACAGCGTGACAGACATCCTGTATGTGAACTCCTTCCAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS TCA 90 bp | CTGGAAGTCTCCTTCTTCTGGGATCCACCTGGTTGGGCCATCTTTTaGGGTTTGGGGCTCTCTCCTGGCTTCTCAGAAGACATTAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LEVSFFWDPPGWAIF*GLGLSPGFSEDISL Trigger: AAGACTAATGTCTTCTGAGAAGCCAGGAGAGAGCCCCAAACCTCAAAAGATGGCCCAACCAGGTGGATCCCAGAAGAAGGAGACTTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000126656.4 ENSMUST00000144827.2 ENSMUST00000230058.2 |
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| CDS-3UTR CAA 90 bp | CAAGACAGCTGGAGTTATCTAGAGAGAAGCAGTATGGGAAGGAAGGGGCTGCATGCAATGAGGCTCATGTaGTGCAGATATGCCACGTCG | + |
|
Preference number: 5 (lower is better) Translates to: QDSWSYLERSSMGRKGLHAMRLM*CRYATS Trigger: CGACGTGGCATATCTGCACAACATGAGCCTCATTGC...ATGCAGCCCCTTCCTTCCCATACTGCTTCTCTCTAGATAACTCCAGCTGTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
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| CDS TCA 90 bp | GGAGCCTTCTCATTTAAGAGCTTCTTCAGGGAAACAGTGAACCAGTaGTCCCATTTGGAGGCCCGGGGAAGGATTTGTGGATTGAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: GAFSFKSFFRETVNQ*SHLEARGRICGLNS Trigger: GCTGTTCAATCCACAAATCCTTCCCCGGGCCTCCAAATGGGATCACTGGTTCACTGTTTCCCTGAAGAAGCTCTTAAATGAGAAGGCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
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| CDS TCA 90 bp | TCTCCTCGATGTCTTCAACAGAAGGCGATTTGGTCCATGGAGATGTaGGGGACATCTGCTGCAGCTTGGACCATGCCTCAGTTTCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SPRCLQQKAIWSMEM*GTSAAAWTMPQFLS Trigger: AGAAAGAAACTGAGGCATGGTCCAAGCTGCAGCAGATGTCCCTCACATCTCCATGGACCAAATCGCCTTCTGTTGAAGACATCGAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
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| CDS GCA 90 bp | CATTGTAGGAAGAGGTCCCGAGGAACTGATTCTGATACTTGTCCATaGTCAGGATGTCCTCTGTATGGAAACTCTGCCAGTGGTAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HCRKRSRGTDSDTCP*SGCPLYGNSASGSR Trigger: CCTGCTACCACTGGCAGAGTTTCCATACAGAGGACATCCTGAGCATGGACAAGTATCAGAATCAGTTCCTCGGGACCTCTTCCTACAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
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| CDS GCA 90 bp | GGCCTGGTCTGCAGAAAAAGGATCTTCTCCACTGACACACTGGACTaGAACAGCAACTTCCTCCATAAGTCTCCCTTTCTCTTTTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GLVCRKRIFSTDTLD*NSNFLHKSPFLFWV Trigger: CACCCAAAAGAGAAAGGGAGACTTATGGAGGAAGTTGCTGTTGCAGTCCAGTGTGTCAGTGGAGAAGATCCTTTTTCTGCAGACCAGGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
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| CDS-3UTR CAA 90 bp | CAAGACAGCTGGAGTTATCTAGAGAGAAGCAGTATGGGAAGGAAGGGGCTGCATAAAGGCAAGGGGCTCTaGGAGGCATTGAAACTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: QDSWSYLERSSMGRKGLHKGKGL*EALKLK Trigger: CTTGAGTTTCAATGCCTCCAAGAGCCCCTTGCCTTT...ATGCAGCCCCTTCCTTCCCATACTGCTTCTCTCTAGATAACTCCAGCTGTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
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| CDS-3UTR CAA 90 bp | CCCTGCTACAGAACAGAGAAAATAATGAACACCTCAACACATGAGGTGGGAGCTGCTGCCCCCACAATTTaGCTTGCCTGCTTGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PCYRTEKIMNTSTHEVGAAAPTI*LACLSL Trigger: CAAGGACAAGCAGGCAAGCAAAATTGTGGGGGCAGC...AGCTCCCACCTCATGTGTTGAGGTGTTCATTATTTTCTCTGTTCTGTAGCAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000126656.4 ENSMUST00000175856.3 |
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| CDS TCA 90 bp | GTAGGTCAGCCAGGTGCATATCGGAAAACTGCTGATCTCTTTGGTTaGTTTCACTGTTGTGGCTGGTGGGATCTGTCACTGGAACAGATC | + |
|
Preference number: 5 (lower is better) Translates to: VGQPGAYRKTADLFG*FHCCGWWDLSLEQI Trigger: GATCTGTTCCAGTGACAGATCCCACCAGCCACAACAGTGAAATCAACCAAAGAGATCAGCAGTTTTCCGATATGCACCTGGCTGACCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000126656.4 ENSMUST00000144827.2 ENSMUST00000230058.2 |
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| CDS-3UTR CAA 90 bp | CCCTGCTACAGAACAGAGAAAATAATGAACACCTCAACACATGAGGTGGGAGCTTGCAGGATCCCATCTTaGGTGACAGTCAGGAAACGC | + |
|
Preference number: 5 (lower is better) Translates to: PCYRTEKIMNTSTHEVGACRIPS*VTVRKR Trigger: GCGTTTCCTGACTGTCACCAAAGATGGGATCCTGCA...AGCTCCCACCTCATGTGTTGAGGTGTTCATTATTTTCTCTGTTCTGTAGCAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
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| CDS-3UTR CAA 90 bp | GACAGCTGGAGTTATCTAGAGAGAAGCAGTATGGGAAGGAAGGGGCTGCATCCTCACACTCGAATGTTCTaGTCCCTAGAAATGCTGATC | + |
|
Preference number: 5 (lower is better) Translates to: DSWSYLERSSMGRKGLHPHTRMF*SLEMLI Trigger: GATCAGCATTTCTAGGGACAAGAACATTCGAGTGTG...AGGATGCAGCCCCTTCCTTCCCATACTGCTTCTCTCTAGATAACTCCAGCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
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| CDS TCA 90 bp | TATACAGAGGAGCCTTCTCATTTAAGAGCTTCTTCAGGGAAACAGTaGACCAGTGATCCCATTTGGAGGCCCGGGGAAGGATTTGTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: YTEEPSHLRASSGKQ*TSDPIWRPGEGFVD Trigger: ATCCACAAATCCTTCCCCGGGCCTCCAAATGGGATCACTGGTTCACTGTTTCCCTGAAGAAGCTCTTAAATGAGAAGGCTCCTCTGTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
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| CDS-3UTR CAA 90 bp | CCCTGCTACAGAACAGAGAAAATAATGAACACCTCAACACATGAGGTGGGAGCTCAAGTGACAAAGCCATaGCAGTCTGAGTCCACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PCYRTEKIMNTSTHEVGAQVTKP*QSESTF Trigger: GAAGGTGGACTCAGACTGCAATGGCTTTGTCACTTG...AGCTCCCACCTCATGTGTTGAGGTGTTCATTATTTTCTCTGTTCTGTAGCAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
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| CDS-3UTR CAA 90 bp | TCTGCAGGGAGACATTTCAAAAGTCCATTTGTAGCTAGAGGGACCTTCAGAGGACAAGTGACAAAGCCATaGCAGTCTGAGTCCACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SAGRHFKSPFVARGTFRGQVTKP*QSESTF Trigger: GAAGGTGGACTCAGACTGCAATGGCTTTGTCACTTG...TCCTCTGAAGGTCCCTCTAGCTACAAATGGACTTTTGAAATGTCTCCCTGCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
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| CDS-3UTR CAA 90 bp | GACGTGCAAGACCCTATAGGTCCCCTGCTACAGAACAGAGAAAATAATGAACACTATCTCTCACCTTCTTaGGCTCTAAAGGCAAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: DVQDPIGPLLQNRENNEHYLSPS*ALKARG Trigger: GCCCCTTGCCTTTAGAGCCAAAGAAGGTGAGAGATA...GTGTTCATTATTTTCTCTGTTCTGTAGCAGGGGACCTATAGGGTCTTGCACGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
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| CDS-3UTR CAA 90 bp | CCCTGCTACAGAACAGAGAAAATAATGAACACCTCAACACATGAGGTGGGAGCTAGCCATATTCCTCTGTaGCTCTGCGTCCTTCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: PCYRTEKIMNTSTHEVGASHIPL*LCVLPM Trigger: CATTGGAAGGACGCAGAGCAACAGAGGAATATGGCT...AGCTCCCACCTCATGTGTTGAGGTGTTCATTATTTTCTCTGTTCTGTAGCAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CAA 90 bp | GTCCCCTGCTACAGAACAGAGAAAATAATGAACACCTCAACACATGAGGTGGGAAGTGAAGGACAGGCATaGGTAGACCTGAGGAGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: VPCYRTEKIMNTSTHEVGSEGQA*VDLRRD Trigger: ATCTCTCCTCAGGTCTACCAATGCCTGTCCTTCACT...TCCCACCTCATGTGTTGAGGTGTTCATTATTTTCTCTGTTCTGTAGCAGGGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
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| CDS TCA 90 bp | CTCCATAAGTCCAGTGGCCTGTGTCCTCAAAGACAAGATCTCTGCTaGCAGAAAATATCTCAGCCTGACCAGCTTATGCCAGAAACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LHKSSGLCPQRQDLC*QKISQPDQLMPETE Trigger: TTCTGTTTCTGGCATAAGCTGGTCAGGCTGAGATATTTTCTGTCAGCAGAGATCTTGTCTTTGAGGACACAGGCCACTGGACTTATGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
||
| CDS GCA 90 bp | GCCACCAATATCAAAGAATTCTATCTTCAGCTCAGTGGAGGCAACTaGAATGAGGCTCATGTTGTGCAGATATGCCACGTCGATAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: ATNIKEFYLQLSGGN*NEAHVVQICHVDNP Trigger: TGGGTTATCGACGTGGCATATCTGCACAACATGAGCCTCATTGCAGTTGCCTCCACTGAGCTGAAGATAGAATTCTTTGATATTGGTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS GCA 90 bp | CTTTTCTTAAATTCAGTGATGATAACCTGGGTTTCTCGGGTTCTTTaGCTGGCAGTATTATCAGCACCAGAGAGGACTTCTCCACGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LFLNSVMITWVSRVL*LAVLSAPERTSPRL Trigger: CAGCCGTGGAGAAGTCCTCTCTGGTGCTGATAATACTGCCAGGCAAAGAACCCGAGAAACCCAGGTTATCATCACTGAATTTAAGAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CAA 90 bp | GACAGCTGGAGTTATCTAGAGAGAAGCAGTATGGGAAGGAAGGGGCTGCATCCTAAACTGCTGATCTCTTaGGTTGATTTCACTGTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: DSWSYLERSSMGRKGLHPKLLIS*VDFTVV Trigger: CACAACAGTGAAATCAACCAAAGAGATCAGCAGTTT...AGGATGCAGCCCCTTCCTTCCCATACTGCTTCTCTCTAGATAACTCCAGCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS TCA 90 bp | CATATAATCCACATACTTCTGCCAAGTGACAAAGCCATTGCAGTCTaGGTCCACCTTCAAGAACAGCAACTCGAGCATCTCTTCCGACAT | + |
|
Preference number: 5 (lower is better) Translates to: HIIHILLPSDKAIAV*VHLQEQQLEHLFRH Trigger: ATGTCGGAAGAGATGCTCGAGTTGCTGTTCTTGAAGGTGGACTCAGACTGCAATGGCTTTGTCACTTGGCAGAAGTATGTGGATTATATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126656.4 ENSMUST00000144827.2 |
||
| CDS-3UTR CAA 90 bp | CCCTGCTACAGAACAGAGAAAATAATGAACACCTCAACACATGAGGTGGGAGCTGTCTCCCTTTCTCTTTaGGGTGTCTTTATCAAACGC | + |
|
Preference number: 5 (lower is better) Translates to: PCYRTEKIMNTSTHEVGAVSLSL*GVFIKR Trigger: GCGTTTGATAAAGACACCCAAAAGAGAAAGGGAGAC...AGCTCCCACCTCATGTGTTGAGGTGTTCATTATTTTCTCTGTTCTGTAGCAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS CCA 90 bp | CTGGACTGCAACAGCAACTTCCTCCATAAGTCTCCCTTTCTCTTTTaGGTGTCTTTATCAAACGCCAGTTTATTACCCGACTTATTGACA | + |
|
Preference number: 5 (lower is better) Translates to: LDCNSNFLHKSPFLF*VSLSNASLLPDLLT Trigger: TGTCAATAAGTCGGGTAATAAACTGGCGTTTGATAAAGACACCCAAAAGAGAAAGGGAGACTTATGGAGGAAGTTGCTGTTGCAGTCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CAA 90 bp | CCCTGCTACAGAACAGAGAAAATAATGAACACCTCAACACATGAGGTGGGAGCTTTTTGGAACGTGAAATaGGTGATTCTCTTACTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PCYRTEKIMNTSTHEVGAFWNVK*VILLLH Trigger: GTGGAGTAAGAGAATCACCAATTTCACGTTCCAAAA...AGCTCCCACCTCATGTGTTGAGGTGTTCATTATTTTCTCTGTTCTGTAGCAGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CAA 90 bp | GTCCCCTGCTACAGAACAGAGAAAATAATGAACACCTCAACACATGAGGTGGGATTGATGTCCCAGATCTaGATATTTCCTTTACTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VPCYRTEKIMNTSTHEVGLMSQI*IFPLLS Trigger: GGACAGTAAAGGAAATATCAAGATCTGGGACATCAA...TCCCACCTCATGTGTTGAGGTGTTCATTATTTTCTCTGTTCTGTAGCAGGGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS GCA 90 bp | CCCACTTTTGATCTTCATAGTCTAGACGGATTGAAGTCTTGGGTATaGATATCTCTTTATCTCTCACCTTCTTTGGCTCTAAAGGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PTFDLHSLDGLKSWV*ISLYLSPSLALKAR Trigger: CCTTGCCTTTAGAGCCAAAGAAGGTGAGAGATAAAGAGATATGCATACCCAAGACTTCAATCCGTCTAGACTATGAAGATCAAAAGTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS-3UTR CAA 90 bp | AGTCAAGGAAAGCTCTCTGGAGGAAGTAACACTTGTGTTGGTTCAAAAGAAAAGAAACTGCTGATCTCTTaGGTTGATTTCACTGTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SQGKLSGGSNTCVGSKEKKLLIS*VDFTVV Trigger: CACAACAGTGAAATCAACCAAAGAGATCAGCAGTTT...CTTTTCTTTTGAACCAACACAAGTGTTACTTCCTCCAGAGAGCTTTCCTTGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144827.2 |
||
| CDS CCA 72 bp | CCGTCACGCAAGCCCGTGAGCAGACACCTCTCCGACTaGTCCAGAGCCATGGCCGTCAGCTCACTTTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PSRKPVSRHLSD*SRAMAVSSLSW Trigger: CCAGGAAAGTGAGCTGACGGCCATGGCTCTGGACCAGTCGGAGAGGTGTCTGCTCACGGGCTTGCGTGACGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS GCA 72 bp | GAGGCCACGACATTCAGCTGTGGGATGTACTTGACCTaGTGGCACCAGTTGGGGTGGAGACCCTTCATGCGG | + |
|
Preference number: 6 (lower is better) Translates to: EATTFSCGMYLT*WHQLGWRPFMR Trigger: CCGCATGAAGGGTCTCCACCCCAACTGGTGCCAGCAGGTCAAGTACATCCCACAGCTGAATGTCGTGGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS GCA 72 bp | TCAGCTCTCCCACGCAGAAAGGCTAACAGCACTGCCTaGTCTCGCCGCTGGTACACCAGGGCTTCAGCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: SALPRRKANSTA*SRRWYTRASAN Trigger: ATTGGCTGAAGCCCTGGTGTACCAGCGGCGAGAGCAGGCAGTGCTGTTAGCCTTTCTGCGTGGGAGAGCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS CAA 90 bp | TTCAGGCCAAATGTTCCTATGGCATCACCAGAGAGTCTCCAAGCCTaGACATCCCGGTCCTGGCCCGCACTGACCACCAGCTGGAAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: FRPNVPMASPESLQA*TSRSWPALTTSWKE Trigger: CTCCTTCCAGCTGGTGGTCAGTGCGGGCCAGGACCGGGATGTCAAGGCTTGGAGACTCTCTGGTGATGCCATAGGAACATTTGGCCTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS CAA 90 bp | ACTGCCTGCTCTCGCCGCTGGTACACCAGGGCTTCAGCCAATTCCTaGTCCATCTCTAGGAAGGAGTGCTTCAGGGTGGCACCGGTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: TACSRRWYTRASANS*SISRKECFRVAPVV Trigger: TACAACCGGTGCCACCCTGAAGCACTCCTTCCTAGAGATGGACAAGGAATTGGCTGAAGCCCTGGTGTACCAGCGGCGAGAGCAGGCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS CCA 72 bp | GCCACGACATTCAGCTGTGGGATGTACTTGACCTGCTaGCACCAGTTGGGGTGGAGACCCTTCATGCGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: ATTFSCGMYLTC*HQLGWRPFMRK Trigger: CTTCCGCATGAAGGGTCTCCACCCCAACTGGTGCCAGCAGGTCAAGTACATCCCACAGCTGAATGTCGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS CCA 72 bp | GACTGGTCCAGAGCCATGGCCGTCAGCTCACTTTCCTaGATGCCGGACACGGGTATCTCCATCCTCTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: DWSRAMAVSSLS*MPDTGISILFL Trigger: CAAGAAGAGGATGGAGATACCCGTGTCCGGCATCCAGGAAAGTGAGCTGACGGCCATGGCTCTGGACCAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS CCA 72 bp | TTGACATCCCGGTCCTGGCCCGCACTGACCACCAGCTaGAAGGAGTTCACATACAGGATGTCTGTCACGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LTSRSWPALTTS*KEFTYRMSVTL Trigger: CAGCGTGACAGACATCCTGTATGTGAACTCCTTCCAGCTGGTGGTCAGTGCGGGCCAGGACCGGGATGTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS CCA 72 bp | CGCAGAAAGGCTAACAGCACTGCCTGCTCTCGCCGCTaGTACACCAGGGCTTCAGCCAATTCCTTGTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: RRKANSTACSRR*YTRASANSLSI Trigger: GATGGACAAGGAATTGGCTGAAGCCCTGGTGTACCAGCGGCGAGAGCAGGCAGTGCTGTTAGCCTTTCTGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS CAA 72 bp | AATGTTCCTATGGCATCACCAGAGAGTCTCCAAGCCTaGACATCCCGGTCCTGGCCCGCACTGACCACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: NVPMASPESLQA*TSRSWPALTTS Trigger: GCTGGTGGTCAGTGCGGGCCAGGACCGGGATGTCAAGGCTTGGAGACTCTCTGGTGATGCCATAGGAACATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS CAA 90 bp | GCCACGACATTCAGCTGTGGGATGTACTTGACCTGCTGGCACCAGTaGGGGTGGAGACCCTTCATGCGGAAGCTTCTATACAGAGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: ATTFSCGMYLTCWHQ*GWRPFMRKLLYRGA Trigger: GGCTCCTCTGTATAGAAGCTTCCGCATGAAGGGTCTCCACCCCAACTGGTGCCAGCAGGTCAAGTACATCCCACAGCTGAATGTCGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS TCA 72 bp | AACACGAGGCCACGACATTCAGCTGTGGGATGTACTTaGCCTGCTGGCACCAGTTGGGGTGGAGACCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: NTRPRHSAVGCT*PAGTSWGGDPS Trigger: TGAAGGGTCTCCACCCCAACTGGTGCCAGCAGGTCAAGTACATCCCACAGCTGAATGTCGTGGCCTCGTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS GCA 72 bp | CACGCACCTTGGGCTTGTATGCTGCCCCCACAATTTTaGTTGCCTGCTTGTCCTTGGTCCATCGAGTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: HAPWACMLPPQF*LPACPWSIESS Trigger: GCTGGACTCGATGGACCAAGGACAAGCAGGCAAGCAAAATTGTGGGGGCAGCATACAAGCCCAAGGTGCGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000126656.4 ENSMUST00000175856.3 |
||
| CDS CAA 72 bp | TCTCGCCGCTGGTACACCAGGGCTTCAGCCAATTCCTaGTCCATCTCTAGGAAGGAGTGCTTCAGGGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SRRWYTRASANS*SISRKECFRVA Trigger: TGCCACCCTGAAGCACTCCTTCCTAGAGATGGACAAGGAATTGGCTGAAGCCCTGGTGTACCAGCGGCGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS GCA 72 bp | TGCTCCTGTAGAAGTAGGTGCTGGTTATGGGGCAGTTaGCCAGGGGAAAGAGCTTTCCGCAGAAGGACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: CSCRSRCWLWGS*PGERAFRRRTG Trigger: TCCAGTCCTTCTGCGGAAAGCTCTTTCCCCTGGGCAACTGCCCCATAACCAGCACCTACTTCTACAGGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS GCA 72 bp | GCCCCCTGCTCCAGTTCATCCACCATCGCAGCCTCTTaGAGTCTCTTCCAGAGATTCAGGCCAAATGTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: APCSSSSTIAAS*SLFQRFRPNVP Trigger: AGGAACATTTGGCCTGAATCTCTGGAAGAGACTGCAAGAGGCTGCGATGGTGGATGAACTGGAGCAGGGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS CCA 72 bp | ATGACAGTCATGGGAAGGTGGAAGCGCAGGCGATACTaGCTCTTCCTCATCTCCTCCTTGCCCTGGAACTCA | + |
|
Preference number: 6 (lower is better) Translates to: MTVMGRWKRRRY*LFLISSLPWNS Trigger: TGAGTTCCAGGGCAAGGAGGAGATGAGGAAGAGCCAGTATCGCCTGCGCTTCCACCTTCCCATGACTGTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126656.4 ENSMUST00000144827.2 |
||
| CDS CCA 72 bp | AAAGGTCTGTCCTTCCACAACCTCCTTCTCCTCCTGTaGCAAGTGGTGCTCGGAGCAGACCTGGAGTTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: KGLSFHNLLLLL*QVVLGADLELL Trigger: AAGCAACTCCAGGTCTGCTCCGAGCACCACTTGCCACAGGAGGAGAAGGAGGTTGTGGAAGGACAGACCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS CCA 72 bp | CACGCTGTCCAGGTGGCTGTTCCAGGTAATCAGAAGTaGTGGGGGAACCAGAGAAAAGGTCTGTCCTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: HAVQVAVPGNQK*WGNQRKGLSFH Trigger: GTGGAAGGACAGACCTTTTCTCTGGTTCCCCCACCACTTCTGATTACCTGGAACAGCCACCTGGACAGCGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS CCA 72 bp | GAAGACACAGACAGAATGGGGTCTGCTGGTCTCCGATaGCCCAGACATCTCAGAAGCAACACCTCGCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: EDTDRMGSAGLR*PRHLRSNTSLP Trigger: AGGAAGCGAGGTGTTGCTTCTGAGATGTCTGGGCCATCGGAGACCAGCAGACCCCATTCTGTCTGTGTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
||
| CDS CAA 72 bp | TGCCCCCTGCTCCAGTTCATCCACCATCGCAGCCTCTaGCAGTCTCTTCCAGAGATTCAGGCCAAATGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: CPLLQFIHHRSL*QSLPEIQAKCS Trigger: GGAACATTTGGCCTGAATCTCTGGAAGAGACTGCAAGAGGCTGCGATGGTGGATGAACTGGAGCAGGGGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS CAA 72 bp | ACACGCACCTTGGGCTTGTATGCTGCCCCCACAATTTaGCTTGCCTGCTTGTCCTTGGTCCATCGAGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: TRTLGLYAAPTI*LACLSLVHRVQ Trigger: CTGGACTCGATGGACCAAGGACAAGCAGGCAAGCAAAATTGTGGGGGCAGCATACAAGCCCAAGGTGCGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126656.4 ENSMUST00000175856.3 |
||
| CDS TCA 72 bp | TCCTTCTTCTGGGATCCACCTGGTTGGGCCATCTTTTaGGGTTTGGGGCTCTCTCCTGGCTTCTCAGAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: SFFWDPPGWAIF*GLGLSPGFSED Trigger: GTCTTCTGAGAAGCCAGGAGAGAGCCCCAAACCTCAAAAGATGGCCCAACCAGGTGGATCCCAGAAGAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000126656.4 ENSMUST00000144827.2 ENSMUST00000230058.2 |
||
| CDS GCA 72 bp | CCTTCCACAACCTCCTTCTCCTCCTGTGGCAAGTGGTaGTCGGAGCAGACCTGGAGTTGCTTAGGAATTAAG | + |
|
Preference number: 6 (lower is better) Translates to: PSTTSFSSCGKW*SEQTWSCLGIK Trigger: CTTAATTCCTAAGCAACTCCAGGTCTGCTCCGAGCACCACTTGCCACAGGAGGAGAAGGAGGTTGTGGAAGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS CCA 72 bp | TGTTGTGGCTGGTGGGATCTGTCACTGGAACAGATCTaGAAGTCTCCTTCTTCTGGGATCCACCTGGTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: CCGWWDLSLEQI*KSPSSGIHLVG Trigger: CCCAACCAGGTGGATCCCAGAAGAAGGAGACTTCCAGATCTGTTCCAGTGACAGATCCCACCAGCCACAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000126656.4 ENSMUST00000144827.2 ENSMUST00000230058.2 |
||
| CDS CCA 72 bp | TGTGGGATGTACTTGACCTGCTGGCACCAGTTGGGGTaGAGACCCTTCATGCGGAAGCTTCTATACAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: CGMYLTCWHQLG*RPFMRKLLYRG Trigger: TCCTCTGTATAGAAGCTTCCGCATGAAGGGTCTCCACCCCAACTGGTGCCAGCAGGTCAAGTACATCCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS CCA 72 bp | TGTCCTTCCACAACCTCCTTCTCCTCCTGTGGCAAGTaGTGCTCGGAGCAGACCTGGAGTTGCTTAGGAATT | + |
|
Preference number: 6 (lower is better) Translates to: CPSTTSFSSCGK*CSEQTWSCLGI Trigger: AATTCCTAAGCAACTCCAGGTCTGCTCCGAGCACCACTTGCCACAGGAGGAGAAGGAGGTTGTGGAAGGACA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS CCA 72 bp | GCTGTCCAGGTGGCTGTTCCAGGTAATCAGAAGTGGTaGGGGAACCAGAGAAAAGGTCTGTCCTTCCACAAC | + |
|
Preference number: 6 (lower is better) Translates to: AVQVAVPGNQKW*GNQRKGLSFHN Trigger: GTTGTGGAAGGACAGACCTTTTCTCTGGTTCCCCCACCACTTCTGATTACCTGGAACAGCCACCTGGACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS CCA 72 bp | GAGTTCACATACAGGATGTCTGTCACGCTGTCCAGGTaGCTGTTCCAGGTAATCAGAAGTGGTGGGGGAACC | + |
|
Preference number: 6 (lower is better) Translates to: EFTYRMSVTLSR*LFQVIRSGGGT Trigger: GGTTCCCCCACCACTTCTGATTACCTGGAACAGCCACCTGGACAGCGTGACAGACATCCTGTATGTGAACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS CCA 72 bp | GCCAGAAACAGAAGACACAGACAGAATGGGGTCTGCTaGTCTCCGATGGCCCAGACATCTCAGAAGCAACAC | + |
|
Preference number: 6 (lower is better) Translates to: ARNRRHRQNGVC*SPMAQTSQKQH Trigger: GTGTTGCTTCTGAGATGTCTGGGCCATCGGAGACCAGCAGACCCCATTCTGTCTGTGTCTTCTGTTTCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
||
| CDS CAA 72 bp | CTCCTTCTTCTGGGATCCACCTGGTTGGGCCATCTTTaGAGGTTTGGGGCTCTCTCCTGGCTTCTCAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: LLLLGSTWLGHL*RFGALSWLLRR Trigger: TCTTCTGAGAAGCCAGGAGAGAGCCCCAAACCTCAAAAGATGGCCCAACCAGGTGGATCCCAGAAGAAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000126656.4 ENSMUST00000144827.2 ENSMUST00000230058.2 |
||
| CDS CAA 72 bp | AGATCTGGAAGTCTCCTTCTTCTGGGATCCACCTGGTaGGGCCATCTTTTGAGGTTTGGGGCTCTCTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RSGSLLLLGSTW*GHLLRFGALSW Trigger: CCAGGAGAGAGCCCCAAACCTCAAAAGATGGCCCAACCAGGTGGATCCCAGAAGAAGGAGACTTCCAGATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000126656.4 ENSMUST00000144827.2 ENSMUST00000230058.2 |
||
| CDS CAA 72 bp | GTCCAGCTCTCCTCGATGTCTTCAACAGAAGGCGATTaGGTCCATGGAGATGTGAGGGACATCTGCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VQLSSMSSTEGD*VHGDVRDICCS Trigger: GCTGCAGCAGATGTCCCTCACATCTCCATGGACCAAATCGCCTTCTGTTGAAGACATCGAGGAGAGCTGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126656.4 ENSMUST00000175856.3 |
||
| CDS CAA 90 bp | CACTGGAACAGATCTGGAAGTCTCCTTCTTCTGGGATCCACCTGGTaGGGCCATCTTTTGAGGTTTGGGGCTCTCTCCTGGCTTCTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: HWNRSGSLLLLGSTW*GHLLRFGALSWLLR Trigger: TCTGAGAAGCCAGGAGAGAGCCCCAAACCTCAAAAGATGGCCCAACCAGGTGGATCCCAGAAGAAGGAGACTTCCAGATCTGTTCCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000126656.4 ENSMUST00000144827.2 ENSMUST00000230058.2 |
||
| CDS CAA 90 bp | CTCCAAACTTGCCCCCTGCTCCAGTTCATCCACCATCGCAGCCTCTaGCAGTCTCTTCCAGAGATTCAGGCCAAATGTTCCTATGGCATC | + |
|
Preference number: 6 (lower is better) Translates to: LQTCPLLQFIHHRSL*QSLPEIQAKCSYGI Trigger: GATGCCATAGGAACATTTGGCCTGAATCTCTGGAAGAGACTGCAAGAGGCTGCGATGGTGGATGAACTGGAGCAGGGGGCAAGTTTGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS CAA 90 bp | GTCCATCGAGTCCAGCTCTCCTCGATGTCTTCAACAGAAGGCGATTaGGTCCATGGAGATGTGAGGGACATCTGCTGCAGCTTGGACCAT | + |
|
Preference number: 6 (lower is better) Translates to: VHRVQLSSMSSTEGD*VHGDVRDICCSLDH Trigger: ATGGTCCAAGCTGCAGCAGATGTCCCTCACATCTCCATGGACCAAATCGCCTTCTGTTGAAGACATCGAGGAGAGCTGGACTCGATGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126656.4 ENSMUST00000175856.3 |
||
| CDS TCA 72 bp | CAGTATTATCAGCACCAGAGAGGACTTCTCCACGGCTaGACACGAGGCCACGACATTCAGCTGTGGGATGTA | + |
|
Preference number: 6 (lower is better) Translates to: QYYQHQRGLLHG*TRGHDIQLWDV Trigger: TACATCCCACAGCTGAATGTCGTGGCCTCGTGTTCAGCCGTGGAGAAGTCCTCTCTGGTGCTGATAATACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS TCA 72 bp | CCTCGCTTCCTCACCTGCTGTCTCATCCAGTTAAACTaGGCTCTGGAGGTAAGGAGTTTGGGGTTCCGAACA | + |
|
Preference number: 6 (lower is better) Translates to: PRFLTCCLIQLN*ALEVRSLGFRT Trigger: TGTTCGGAACCCCAAACTCCTTACCTCCAGAGCTCAGTTTAACTGGATGAGACAGCAGGTGAGGAAGCGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
||
| CDS GCA 72 bp | ACTCACCACCTGCTTAAAGATCTTGCTGTAGAGGACTaGACACAGGGGTGTGTTGTGAGTCGTCATCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: THHLLKDLAVED*TQGCVVSRHPP Trigger: GGGAGGATGACGACTCACAACACACCCCTGTGTGCAGTCCTCTACAGCAAGATCTTTAAGCAGGTGGTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS GCA 72 bp | GGCGATTTGGTCCATGGAGATGTGAGGGACATCTGCTaGAGCTTGGACCATGCCTCAGTTTCTTTCTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: GDLVHGDVRDIC*SLDHASVSFSA Trigger: AGCTGAGAAAGAAACTGAGGCATGGTCCAAGCTGCAGCAGATGTCCCTCACATCTCCATGGACCAAATCGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS CCA 72 bp | ACCAGCTTATGCCAGAAACAGAAGACACAGACAGAATaGGGTCTGCTGGTCTCCGATGGCCCAGACATCTCA | + |
|
Preference number: 6 (lower is better) Translates to: TSLCQKQKTQTE*GLLVSDGPDIS Trigger: TGAGATGTCTGGGCCATCGGAGACCAGCAGACCCCATTCTGTCTGTGTCTTCTGTTTCTGGCATAAGCTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
||
| CDS CAA 72 bp | GGAAGGATTTGTGGATTGAACAGCCCACCAGCCACGTaGTCAGAGATGAAGATGGTGGCATTGCCCTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GRICGLNSPPAT*SEMKMVALPLV Trigger: CACCAAGGGCAATGCCACCATCTTCATCTCTGACAACGTGGCTGGTGGGCTGTTCAATCCACAAATCCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS CAA 72 bp | TTGGTCCATGGAGATGTGAGGGACATCTGCTGCAGCTaGGACCATGCCTCAGTTTCTTTCTCAGCTCTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LVHGDVRDICCS*DHASVSFSALP Trigger: TGGGAGAGCTGAGAAAGAAACTGAGGCATGGTCCAAGCTGCAGCAGATGTCCCTCACATCTCCATGGACCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS CAA 90 bp | GAAGTCGGGCTGTTGGATCGGCTTAAGGTCAGTGAAGGACAGGCATaGGTAGACCTGAGGAGAGATCTGCTGTCTCATCCAGTTAAACTG | + |
|
Preference number: 6 (lower is better) Translates to: EVGLLDRLKVSEGQA*VDLRRDLLSHPVKL Trigger: CAGTTTAACTGGATGAGACAGCAGATCTCTCCTCAGGTCTACCAATGCCTGTCCTTCACTGACCTTAAGCCGATCCAACAGCCCGACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS GCA 72 bp | AGCGCAGGCGATACTGGCTCTTCCTCATCTCCTCCTTaGCCTGGAACTCACGCATCATATAATCCACATACT | + |
|
Preference number: 6 (lower is better) Translates to: SAGDTGSSSSPP*PGTHASYNPHT Trigger: AGTATGTGGATTATATGATGCGTGAGTTCCAGGGCAAGGAGGAGATGAGGAAGAGCCAGTATCGCCTGCGCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126656.4 ENSMUST00000144827.2 |
||
| CDS GCA 72 bp | GAAGGCGATTTGGTCCATGGAGATGTGAGGGACATCTaGTGCAGCTTGGACCATGCCTCAGTTTCTTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: EGDLVHGDVRDI*CSLDHASVSFS Trigger: TGAGAAAGAAACTGAGGCATGGTCCAAGCTGCAGCAGATGTCCCTCACATCTCCATGGACCAAATCGCCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
||
| CDS GCA 72 bp | TATGCCAGAAACAGAAGACACAGACAGAATGGGGTCTaGTGGTCTCCGATGGCCCAGACATCTCAGAAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: YARNRRHRQNGV*WSPMAQTSQKQ Trigger: TTGCTTCTGAGATGTCTGGGCCATCGGAGACCAGCAGACCCCATTCTGTCTGTGTCTTCTGTTTCTGGCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
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| CDS CAA 72 bp | CTGTTGGATCGGCTTAAGGTCAGTGAAGGACAGGCATaGGTAGACCTGAGGAGAGATCTGCTGTCTCATCCA | + |
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Preference number: 6 (lower is better) Translates to: LLDRLKVSEGQA*VDLRRDLLSHP Trigger: TGGATGAGACAGCAGATCTCTCCTCAGGTCTACCAATGCCTGTCCTTCACTGACCTTAAGCCGATCCAACAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
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| CDS CAA 90 bp | ATGGAAACTCTGCCAGTGGTAGCAGGAGAGCGCCTGTGTGATCTTTaGGAACGTGAAATTGGTGATTCTCTTACTCCACCCGGTCGTGTA | + |
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Preference number: 6 (lower is better) Translates to: METLPVVAGERLCDL*EREIGDSLTPPGRV Trigger: TACACGACCGGGTGGAGTAAGAGAATCACCAATTTCACGTTCCAAAAGATCACACAGGCGCTCTCCTGCTACCACTGGCAGAGTTTCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
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| CDS CAA 72 bp | TTCTTTGGCTCTAAAGGCAAGGGGCTCTTGGAGGCATaGAAACTCAAGATGGGCTTTGACGTGCTGACGTTC | + |
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Preference number: 6 (lower is better) Translates to: FFGSKGKGLLEA*KLKMGFDVLTF Trigger: GAACGTCAGCACGTCAAAGCCCATCTTGAGTTTCAATGCCTCCAAGAGCCCCTTGCCTTTAGAGCCAAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
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| CDS CAA 72 bp | TCTCTCACCTTCTTTGGCTCTAAAGGCAAGGGGCTCTaGGAGGCATTGAAACTCAAGATGGGCTTTGACGTG | + |
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Preference number: 6 (lower is better) Translates to: SLTFFGSKGKGL*EALKLKMGFDV Trigger: CACGTCAAAGCCCATCTTGAGTTTCAATGCCTCCAAGAGCCCCTTGCCTTTAGAGCCAAAGAAGGTGAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
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| CDS CAA 72 bp | ACTCCTGAAATGTTTCTCCTGAGCCATATTCCTCTGTaGCTCTGCGTCCTTCCAATGTTTCATCACCGGGGG | + |
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Preference number: 6 (lower is better) Translates to: TPEMFLLSHIPL*LCVLPMFHHRG Trigger: CCCCCGGTGATGAAACATTGGAAGGACGCAGAGCAACAGAGGAATATGGCTCAGGAGAAACATTTCAGGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
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| CDS CAA 90 bp | TCTCTCACCTTCTTTGGCTCTAAAGGCAAGGGGCTCTTGGAGGCATaGAAACTCAAGATGGGCTTTGACGTGCTGACGTTCCAGAAAACA | + |
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Preference number: 6 (lower is better) Translates to: SLTFFGSKGKGLLEA*KLKMGFDVLTFQKT Trigger: TGTTTTCTGGAACGTCAGCACGTCAAAGCCCATCTTGAGTTTCAATGCCTCCAAGAGCCCCTTGCCTTTAGAGCCAAAGAAGGTGAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
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| CDS TCA 72 bp | CCAGGTGCATATCGGAAAACTGCTGATCTCTTTGGTTaGTTTCACTGTTGTGGCTGGTGGGATCTGTCACTG | + |
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Preference number: 6 (lower is better) Translates to: PGAYRKTADLFG*FHCCGWWDLSL Trigger: CAGTGACAGATCCCACCAGCCACAACAGTGAAATCAACCAAAGAGATCAGCAGTTTTCCGATATGCACCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000126656.4 ENSMUST00000144827.2 ENSMUST00000230058.2 |
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| CDS TCA 72 bp | CACATACTTCTGCCAAGTGACAAAGCCATTGCAGTCTaGGTCCACCTTCAAGAACAGCAACTCGAGCATCTC | + |
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Preference number: 6 (lower is better) Translates to: HILLPSDKAIAV*VHLQEQQLEHL Trigger: GAGATGCTCGAGTTGCTGTTCTTGAAGGTGGACTCAGACTGCAATGGCTTTGTCACTTGGCAGAAGTATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126656.4 ENSMUST00000144827.2 |
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| CDS TCA 72 bp | TCATTTAAGAGCTTCTTCAGGGAAACAGTGAACCAGTaGTCCCATTTGGAGGCCCGGGGAAGGATTTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: SFKSFFRETVNQ*SHLEARGRICG Trigger: TCCACAAATCCTTCCCCGGGCCTCCAAATGGGATCACTGGTTCACTGTTTCCCTGAAGAAGCTCTTAAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
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| CDS TCA 72 bp | TCCAGTGGCCTGTGTCCTCAAAGACAAGATCTCTGCTaGCAGAAAATATCTCAGCCTGACCAGCTTATGCCA | + |
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Preference number: 6 (lower is better) Translates to: SSGLCPQRQDLC*QKISQPDQLMP Trigger: TGGCATAAGCTGGTCAGGCTGAGATATTTTCTGTCAGCAGAGATCTTGTCTTTGAGGACACAGGCCACTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
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| CDS GCA 72 bp | AAGAGGTCCCGAGGAACTGATTCTGATACTTGTCCATaGTCAGGATGTCCTCTGTATGGAAACTCTGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: KRSRGTDSDTCP*SGCPLYGNSAS Trigger: ACTGGCAGAGTTTCCATACAGAGGACATCCTGAGCATGGACAAGTATCAGAATCAGTTCCTCGGGACCTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
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| CDS CAA 90 bp | ATCTCTTTATCTCTCACCTTCTTTGGCTCTAAAGGCAAGGGGCTCTaGGAGGCATTGAAACTCAAGATGGGCTTTGACGTGCTGACGTTC | + |
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Preference number: 6 (lower is better) Translates to: ISLSLTFFGSKGKGL*EALKLKMGFDVLTF Trigger: GAACGTCAGCACGTCAAAGCCCATCTTGAGTTTCAATGCCTCCAAGAGCCCCTTGCCTTTAGAGCCAAAGAAGGTGAGAGATAAAGAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
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| CDS CAA 90 bp | CCTTTTCTTAAATTCAGTGATGATAACCTGGGTTTCTCGGGTTCTTaGCCTGGCAGTATTATCAGCACCAGAGAGGACTTCTCCACGGCT | + |
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Preference number: 6 (lower is better) Translates to: PFLKFSDDNLGFSGS*PGSIISTREDFSTA Trigger: AGCCGTGGAGAAGTCCTCTCTGGTGCTGATAATACTGCCAGGCAAAGAACCCGAGAAACCCAGGTTATCATCACTGAATTTAAGAAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
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| CDS TCA 72 bp | TTCTGTAGGTCAGCCAGGTGCATATCGGAAAACTGCTaGTCTCTTTGGTTGATTTCACTGTTGTGGCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: FCRSARCISENC*SLWLISLLWLV Trigger: CACCAGCCACAACAGTGAAATCAACCAAAGAGATCAGCAGTTTTCCGATATGCACCTGGCTGACCTACAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000126656.4 ENSMUST00000144827.2 ENSMUST00000230058.2 |
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| CDS GCA 72 bp | TGCAGAAAAAGGATCTTCTCCACTGACACACTGGACTaGAACAGCAACTTCCTCCATAAGTCTCCCTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: CRKRIFSTDTLD*NSNFLHKSPFL Trigger: GAGAAAGGGAGACTTATGGAGGAAGTTGCTGTTGCAGTCCAGTGTGTCAGTGGAGAAGATCCTTTTTCTGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
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| CDS CAA 72 bp | AATCCACATACTTCTGCTGTCCAAGTGACAAAGCCATaGCAGTCTGAGTCCACCTTCAAGAACAGCAACTCG | + |
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Preference number: 6 (lower is better) Translates to: NPHTSAVQVTKP*QSESTFKNSNS Trigger: CGAGTTGCTGTTCTTGAAGGTGGACTCAGACTGCAATGGCTTTGTCACTTGGACAGCAGAAGTATGTGGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230058.2 |
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| CDS GCA 72 bp | ATCAAAGAATTCTATCTTCAGCTCAGTGGAGGCAACTaGAATGAGGCTCATGTTGTGCAGATATGCCACGTC | + |
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Preference number: 6 (lower is better) Translates to: IKEFYLQLSGGN*NEAHVVQICHV Trigger: GACGTGGCATATCTGCACAACATGAGCCTCATTGCAGTTGCCTCCACTGAGCTGAAGATAGAATTCTTTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
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| CDS GCA 72 bp | AATTCAGTGATGATAACCTGGGTTTCTCGGGTTCTTTaGCTGGCAGTATTATCAGCACCAGAGAGGACTTCT | + |
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Preference number: 6 (lower is better) Translates to: NSVMITWVSRVL*LAVLSAPERTS Trigger: AGAAGTCCTCTCTGGTGCTGATAATACTGCCAGGCAAAGAACCCGAGAAACCCAGGTTATCATCACTGAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
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| CDS CAA 72 bp | AAATTCAGTGATGATAACCTGGGTTTCTCGGGTTCTTaGCCTGGCAGTATTATCAGCACCAGAGAGGACTTC | + |
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Preference number: 6 (lower is better) Translates to: KFSDDNLGFSGS*PGSIISTREDF Trigger: GAAGTCCTCTCTGGTGCTGATAATACTGCCAGGCAAAGAACCCGAGAAACCCAGGTTATCATCACTGAATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
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| CDS CAA 90 bp | TCCAGGGCCTGTGTGCCCACTTTTGATCTTCATAGTCTAGACGGATaGAAGTCTTGGGTATGCATATCTCTTTATCTCTCACCTTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: SRACVPTFDLHSLDG*KSWVCISLYLSPSL Trigger: CAAAGAAGGTGAGAGATAAAGAGATATGCATACCCAAGACTTCAATCCGTCTAGACTATGAAGATCAAAAGTGGGCACACAGGCCCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
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| CDS TCA 72 bp | AAGACAAGATCTCTGCTGACAGAAAATATCTCAGCCTaGCCAGCTTATGCCAGAAACAGAAGACACAGACAG | + |
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Preference number: 6 (lower is better) Translates to: KTRSLLTENISA*PAYARNRRHRQ Trigger: CTGTCTGTGTCTTCTGTTTCTGGCATAAGCTGGTCAGGCTGAGATATTTTCTGTCAGCAGAGATCTTGTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175856.3 |
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| CDS CCA 72 bp | AAAGAATTCCTTTTCTTAAATTCAGTGATGATAACCTaGGTTTCTCGGGTTCTTTGCCTGGCAGTATTATCA | + |
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Preference number: 6 (lower is better) Translates to: KEFLFLNSVMIT*VSRVLCLAVLS Trigger: TGATAATACTGCCAGGCAAAGAACCCGAGAAACCCAGGTTATCATCACTGAATTTAAGAAAAGGAATTCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126656.4 |
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