Pregenerated sensors for EFCAB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026495Ensembl transcript IDs: ENSMUST00000027775.9
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGCCAACGAAGCAGCCTACCAGCTGGTCTCCTTCCCTCTGGCCTTaGCCCTTCAAAGTATTTCTCAGGCTATTTACAACTCCAGCTCCT | + |
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Preference number: 1 (lower is better) Translates to: LPTKQPTSWSPSLWP*PFKVFLRLFTTPAP Trigger: AGGAGCTGGAGTTGTAAATAGCCTGAGAAATACTTTGAAGGGTCAAGGCCAGAGGGAAGGAGACCAGCTGGTAGGCTGCTTCGTTGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR GCA 90 bp | TTCATGTCCATGACCAAGGTCAAGACCTTTGTAGCCCTGGATCTCTaGCCCTCTGAGTGTCCTCTGCTCCTCTGCCATGTCTCAACTCTT | + |
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Preference number: 1 (lower is better) Translates to: FMSMTKVKTFVALDL*PSECPLLLCHVSTL Trigger: AAGAGTTGAGACATGGCAGAGGAGCAGAGGACACTCAGAGGGGCAGAGATCCAGGGCTACAAAGGTCTTGACCTTGGTCATGGACATGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR GCA 90 bp | TTTGTAGCCCTGGATCTCTGCCCCTCTGAGTGTCCTCTGCTCCTCTaGCATGTCTCAACTCTTGAAATACAAGCTTGCAGCATTCTTGCA | + |
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Preference number: 1 (lower is better) Translates to: FVALDLCPSECPLLL*HVSTLEIQACSILA Trigger: TGCAAGAATGCTGCAAGCTTGTATTTCAAGAGTTGAGACATGGCAGAGGAGCAGAGGACACTCAGAGGGGCAGAGATCCAGGGCTACAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR GCA 90 bp | TGTCCTCTGCTCCTCTGCCATGTCTCAACTCTTGAAATACAAGCTTaGAGCATTCTTGCACCGTTTACATCTTCCAAACCCCTCCCCTCT | + |
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Preference number: 1 (lower is better) Translates to: CPLLLCHVSTLEIQA*SILAPFTSSKPLPS Trigger: AGAGGGGAGGGGTTTGGAAGATGTAAACGGTGCAAGAATGCTGCAAGCTTGTATTTCAAGAGTTGAGACATGGCAGAGGAGCAGAGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR TCA 90 bp | GTACAGAGAAGTCAAACTGCAAGCAGAGCATATTGTTCTCAGGAATaGCAGGCCTTCTCACCACACACTGTTTGCCCTTTGGAGTCTTAC | + |
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Preference number: 1 (lower is better) Translates to: VQRSQTASRAYCSQE*QAFSPHTVCPLESY Trigger: GTAAGACTCCAAAGGGCAAACAGTGTGTGGTGAGAAGGCCTGTCATTCCTGAGAACAATATGCTCTGCTTGCAGTTTGACTTCTCTGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR TCA 90 bp | TTATTAATAGTTATTCTGGTCGCTCTCCCTCCATATTCTGCTTGCTaGAGTGTTTACTGCTGCTCTGAAAGGCAGCCATCACCAAGCTGC | + |
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Preference number: 1 (lower is better) Translates to: LLIVILVALPPYSAC*SVYCCSERQPSPSC Trigger: GCAGCTTGGTGATGGCTGCCTTTCAGAGCAGCAGTAAACACTTCAGCAAGCAGAATATGGAGGGAGAGCGACCAGAATAACTATTAATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR TCA 90 bp | TTATTATTTACCAAGTGTTCAAGCCAGACACTTAGGATTTGTGCTTaGCTTTCCCTAGCCCATCTCTCACTGCCAACGAAGCAGCCTACC | + |
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Preference number: 1 (lower is better) Translates to: LLFTKCSSQTLRICA*LSLAHLSLPTKQPT Trigger: GGTAGGCTGCTTCGTTGGCAGTGAGAGATGGGCTAGGGAAAGTCAAGCACAAATCCTAAGTGTCTGGCTTGAACACTTGGTAAATAATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR TCA 90 bp | ATGACCACAGTCAAGCCTATTAGCCTAAGCCTTGGGCATCTTATCTaGATGGCTGATATTATTATTTACCAAGTGTTCAAGCCAGACACT | + |
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Preference number: 1 (lower is better) Translates to: MTTVKPISLSLGHLI*MADIIIYQVFKPDT Trigger: AGTGTCTGGCTTGAACACTTGGTAAATAATAATATCAGCCATTCAGATAAGATGCCCAAGGCTTAGGCTAATAGGCTTGACTGTGGTCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR TCA 90 bp | AGTTTTGTTGTGGTGAAGATTCAGCATCACAAAGCCTACAAAGGCTaGTTAATGCAGTCCCTTATAGTTACAAAACTTCTTTGCCACTCC | + |
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Preference number: 1 (lower is better) Translates to: SFVVVKIQHHKAYKG*LMQSLIVTKLLCHS Trigger: GGAGTGGCAAAGAAGTTTTGTAACTATAAGGGACTGCATTAATCAGCCTTTGTAGGCTTTGTGATGCTGAATCTTCACCACAACAAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR CCA 90 bp | AACACTGAAACCTTAACCCCAATTAGCTCATTATCTCTTAGGATATaGTTCTTATTTCAACCTCTCATCTCTCATCAGGTTCCAAATATC | + |
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Preference number: 1 (lower is better) Translates to: NTETLTPISSLSLRI*FLFQPLISHQVPNI Trigger: GATATTTGGAACCTGATGAGAGATGAGAGGTTGAAATAAGAACCATATCCTAAGAGATAATGAGCTAATTGGGGTTAAGGTTTCAGTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR-3UTR TCA 90 bp | CCTCCCAGCCTCTCTGCTCTTGCTTGCTTGTGCTTCTGTCTGGCTAGCTGTACCATGCTGCCTGGACCTTaGCCATCTATAACTGTGAGC | + |
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Preference number: 2 (lower is better) Translates to: PPSLSALACLCFCLASCTMLPGP*PSITVS Trigger: GCTCACAGTTATAGATGGTCAAGGTCCAGGCAGCAT...GGTACAGCTAGCCAGACAGAAGCACAAGCAAGCAAGAGCAGAGAGGCTGGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR-3UTR TCA 90 bp | CCAGCTGGTCTCCTTCCCTCTGGCCTTGACCCTTCAAAGTATTTCTCAGGCTATACACCTCTGGGGGTTTaGTCTGCTGTCCTGCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: PAGLLPSGLDPSKYFSGYTPLGV*SAVLLL Trigger: CAGCAGCAGGACAGCAGATCAAACCCCCAGAGGTGT...ATAGCCTGAGAAATACTTTGAAGGGTCAAGGCCAGAGGGAAGGAGACCAGCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR-3UTR TCA 90 bp | CCAGCTGGTCTCCTTCCCTCTGGCCTTGACCCTTCAAAGTATTTCTCAGGCTATAAATGCTTTACCCATTaGGCCATCTCCCCAGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: PAGLLPSGLDPSKYFSGYKCFTH*AISPAW Trigger: CCAGGCTGGGGAGATGGCTCAATGGGTAAAGCATTT...ATAGCCTGAGAAATACTTTGAAGGGTCAAGGCCAGAGGGAAGGAGACCAGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR-3UTR TCA 90 bp | CCAGCTGGTCTCCTTCCCTCTGGCCTTGACCCTTCAAAGTATTTCTCAGGCTATCAACCTTCAGTCCCCTaGATGTGTGGTTGCTCATTG | + |
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Preference number: 2 (lower is better) Translates to: PAGLLPSGLDPSKYFSGYQPSVP*MCGCSL Trigger: CAATGAGCAACCACACATTCAGGGGACTGAAGGTTG...ATAGCCTGAGAAATACTTTGAAGGGTCAAGGCCAGAGGGAAGGAGACCAGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR-3UTR TCA 90 bp | AGCATATTGTTCTCAGGAATGACAGGCCTTCTCACCACACACTGTTTGCCCTTTTGTTTACTGCTGCTCTaGAAGGCAGCCATCACCAAG | + |
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Preference number: 2 (lower is better) Translates to: SILFSGMTGLLTTHCLPFCLLLL*KAAITK Trigger: CTTGGTGATGGCTGCCTTTCAGAGCAGCAGTAAACA...AAAGGGCAAACAGTGTGTGGTGAGAAGGCCTGTCATTCCTGAGAACAATATGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR CAA 90 bp | AATCTTCCATGCAAGTCTACTCCTAGCTGGATTTCCCTCCCACCTTaGCCTACAGACCATCAAGGTCACTCATTTCTGCTGACTCATCAA | + |
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Preference number: 2 (lower is better) Translates to: NLPCKSTPSWISLPP*PTDHQGHSFLLTHQ Trigger: TTGATGAGTCAGCAGAAATGAGTGACCTTGATGGTCTGTAGGCAAAGGTGGGAGGGAAATCCAGCTAGGAGTAGACTTGCATGGAAGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR-3UTR GCA 90 bp | GTCCTCCAGGCTCTTCCTCACATCTGTTTATTCCTGAAGTCACTAACTCTCCTGCCACCAGGCTTCTTTTaGTTCTTTTGTGCAACCTTC | + |
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Preference number: 2 (lower is better) Translates to: VLQALPHICLFLKSLTLLPPGFF*FFCATF Trigger: GAAGGTTGCACAAAAGAAGCAAAAGAAGCCTGGTGG...CAGGAGAGTTAGTGACTTCAGGAATAAACAGATGTGAGGAAGAGCCTGGAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR-3UTR GCA 90 bp | AATAGTACAGAGAAGTCAAACTGCAAGCAGAGCATATTGTTCTCAGGAATGACACAGGGCTTCTCCCCATaGTCTGAGGGGTCCTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: NSTEKSNCKQSILFSGMTQGFSP*SEGSSS Trigger: AGAAGAGGACCCCTCAGAGCATGGGGAGAAGCCCTG...TGTCATTCCTGAGAACAATATGCTCTGCTTGCAGTTTGACTTCTCTGTACTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR-3UTR GCA 90 bp | AGCATATTGTTCTCAGGAATGACAGGCCTTCTCACCACACACTGTTTGCCCTTTTGTCCTCTGCTCCTCTaGCATGTCTCAACTCTTGAA | + |
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Preference number: 2 (lower is better) Translates to: SILFSGMTGLLTTHCLPFCPLLL*HVSTLE Trigger: TTCAAGAGTTGAGACATGGCAGAGGAGCAGAGGACA...AAAGGGCAAACAGTGTGTGGTGAGAAGGCCTGTCATTCCTGAGAACAATATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR CAA 90 bp | ATGCTCAGTAATAGTACAGAGAAGTCAAACTGCAAGCAGAGCATATaGTTCTCAGGAATGACAGGCCTTCTCACCACACACTGTTTGCCC | + |
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Preference number: 2 (lower is better) Translates to: MLSNSTEKSNCKQSI*FSGMTGLLTTHCLP Trigger: GGGCAAACAGTGTGTGGTGAGAAGGCCTGTCATTCCTGAGAACAATATGCTCTGCTTGCAGTTTGACTTCTCTGTACTATTACTGAGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR-3UTR GCA 90 bp | CATGTCTCAACTCTTGAAATACAAGCTTGCAGCATTCTTGCACCGTTTACATCTGTGGCCATCCTGCCCTaGAAGAGCTTTCTATGGCAA | + |
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Preference number: 2 (lower is better) Translates to: HVSTLEIQACSILAPFTSVAILP*KSFLWQ Trigger: TTGCCATAGAAAGCTCTTGCAGGGCAGGATGGCCAC...AGATGTAAACGGTGCAAGAATGCTGCAAGCTTGTATTTCAAGAGTTGAGACATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR-3UTR GCA 90 bp | CATGTCTCAACTCTTGAAATACAAGCTTGCAGCATTCTTGCACCGTTTACATCTTCTGGGGGTTTGATCTaGTGTCCTGCTGCTGACATG | + |
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Preference number: 2 (lower is better) Translates to: HVSTLEIQACSILAPFTSSGGLI*CPAADM Trigger: CATGTCAGCAGCAGGACAGCAGATCAAACCCCCAGA...AGATGTAAACGGTGCAAGAATGCTGCAAGCTTGTATTTCAAGAGTTGAGACATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR-3UTR CCA 90 bp | GTCCTCCAGGCTCTTCCTCACATCTGTTTATTCCTGAAGTCACTAACTCTCCTGGAGACTCTACTGCCATaGATTCTCTTTCTTCAGCTT | + |
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Preference number: 2 (lower is better) Translates to: VLQALPHICLFLKSLTLLETLLP*ILFLQL Trigger: AAGCTGAAGAAAGAGAATCCATGGCAGTAGAGTCTC...CAGGAGAGTTAGTGACTTCAGGAATAAACAGATGTGAGGAAGAGCCTGGAGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR-3UTR TCA 90 bp | AGCATATTGTTCTCAGGAATGACAGGCCTTCTCACCACACACTGTTTGCCCTTTATTAGTTCATGTCCATaGCCAAGGTCAAGACCTTTG | + |
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Preference number: 2 (lower is better) Translates to: SILFSGMTGLLTTHCLPFISSCP*PRSRPL Trigger: CAAAGGTCTTGACCTTGGTCATGGACATGAACTAAT...AAAGGGCAAACAGTGTGTGGTGAGAAGGCCTGTCATTCCTGAGAACAATATGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR-3UTR GCA 90 bp | CCAGCTGGTCTCCTTCCCTCTGGCCTTGACCCTTCAAAGTATTTCTCAGGCTATTGCTCTGAAGTAAACTaGTCAAAGAATGACTATTTG | + |
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Preference number: 2 (lower is better) Translates to: PAGLLPSGLDPSKYFSGYCSEVN*SKNDYL Trigger: CAAATAGTCATTCTTTGAGCAGTTTACTTCAGAGCA...ATAGCCTGAGAAATACTTTGAAGGGTCAAGGCCAGAGGGAAGGAGACCAGCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR CAA 90 bp | GCTTCCACCACATTATCTAATGATACTCAGCAAATGCTTTACCCATaGAGCCATCTCCCCAGCCTGGAAAGTAATTCTTATGAGAGGACT | + |
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Preference number: 2 (lower is better) Translates to: ASTTLSNDTQQMLYP*SHLPSLESNSYERT Trigger: AGTCCTCTCATAAGAATTACTTTCCAGGCTGGGGAGATGGCTCAATGGGTAAAGCATTTGCTGAGTATCATTAGATAATGTGGTGGAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR-3UTR GCA 90 bp | AGTATTTCTCAGGCTATTTACAACTCCAGCTCCTTTCTCTCTGATTCTCAGAGATCTCCCTCCATATTCTaGTTGCTGAAGTGTTTACTG | + |
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Preference number: 2 (lower is better) Translates to: SISQAIYNSSSFLSDSQRSPSIF*LLKCLL Trigger: CAGTAAACACTTCAGCAAGCAGAATATGGAGGGAGA...TCTCTGAGAATCAGAGAGAAAGGAGCTGGAGTTGTAAATAGCCTGAGAAATACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR-3UTR TCA 90 bp | AATAGTACAGAGAAGTCAAACTGCAAGCAGAGCATATTGTTCTCAGGAATGACACCATGTCTCAACTCTTaGAATACAAGCTTGCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: NSTEKSNCKQSILFSGMTPCLNS*NTSLQH Trigger: ATGCTGCAAGCTTGTATTTCAAGAGTTGAGACATGG...TGTCATTCCTGAGAACAATATGCTCTGCTTGCAGTTTGACTTCTCTGTACTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR-3UTR GCA 90 bp | CATGTCTCAACTCTTGAAATACAAGCTTGCAGCATTCTTGCACCGTTTACATCTCTTAAGAGACTCTACTaGCATGGATTCTCTTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: HVSTLEIQACSILAPFTSLKRLY*HGFSFF Trigger: GAAGAAAGAGAATCCATGGCAGTAGAGTCTCTTAAG...AGATGTAAACGGTGCAAGAATGCTGCAAGCTTGTATTTCAAGAGTTGAGACATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR-3UTR CCA 90 bp | AGAGGTTTATCCATCTTTCATCTCCAGCTTCCACCACATTATCTAATGATACTCCAGTCTTCCTTTCTCTaGATCCAATTATCTCACCTC | + |
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Preference number: 2 (lower is better) Translates to: RGLSIFHLQLPPHYLMILQSSFL*IQLSHL Trigger: GAGGTGAGATAATTGGATCCAGAGAAAGGAAGACTG...GAGTATCATTAGATAATGTGGTGGAAGCTGGAGATGAAAGATGGATAAACCTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR-3UTR CCA 90 bp | AATAGTACAGAGAAGTCAAACTGCAAGCAGAGCATATTGTTCTCAGGAATGACAAGTCCCCTGAATGTGTaGTTGCTCATTGACTTACTT | + |
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Preference number: 2 (lower is better) Translates to: NSTEKSNCKQSILFSGMTSPLNV*LLIDLL Trigger: AAGTAAGTCAATGAGCAACCACACATTCAGGGGACT...TGTCATTCCTGAGAACAATATGCTCTGCTTGCAGTTTGACTTCTCTGTACTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR-3UTR TCA 90 bp | TTCTTATTTCAACCTCTCATCTCTCATCAGGTTCCAAATATCTATCAACCATACCCATATTCTGCTTGCTaGAGTGTTTACTGCTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: FLFQPLISHQVPNIYQPYPYSAC*SVYCCS Trigger: AGAGCAGCAGTAAACACTTCAGCAAGCAGAATATGG...GTATGGTTGATAGATATTTGGAACCTGATGAGAGATGAGAGGTTGAAATAAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR-3UTR CCA 90 bp | AATAGTACAGAGAAGTCAAACTGCAAGCAGAGCATATTGTTCTCAGGAATGACATACATATTTTGCTTCTaGGCCAGTGTTACTGGACAA | + |
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Preference number: 2 (lower is better) Translates to: NSTEKSNCKQSILFSGMTYIFCF*ASVTGQ Trigger: TTGTCCAGTAACACTGGCCCAGAAGCAAAATATGTA...TGTCATTCCTGAGAACAATATGCTCTGCTTGCAGTTTGACTTCTCTGTACTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR-3UTR CCA 90 bp | AATAGTACAGAGAAGTCAAACTGCAAGCAGAGCATATTGTTCTCAGGAATGACAACACTGTTTGCCCTTTaGAGTCTTACAATCTTCCAT | + |
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Preference number: 2 (lower is better) Translates to: NSTEKSNCKQSILFSGMTTLFAL*SLTIFH Trigger: ATGGAAGATTGTAAGACTCCAAAGGGCAAACAGTGT...TGTCATTCCTGAGAACAATATGCTCTGCTTGCAGTTTGACTTCTCTGTACTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR GCA 72 bp | GTTTACTGCTGCTCTGAAAGGCAGCCATCACCAAGCTaGCACTCACATCTAGTCTGTGGCCATCCTGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: VYCCSERQPSPS*HSHLVCGHPAL Trigger: CAGGGCAGGATGGCCACAGACTAGATGTGAGTGGCAGCTTGGTGATGGCTGCCTTTCAGAGCAGCAGTAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR TCA 72 bp | CCCAGATTCTTGCGTTTCAGGACACCTCTGGGGGTTTaGTCTGCTGTCCTGCTGCTGACATGCTCTGAAGTA | + |
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Preference number: 3 (lower is better) Translates to: PRFLRFRTPLGV*SAVLLLTCSEV Trigger: TACTTCAGAGCATGTCAGCAGCAGGACAGCAGATCAAACCCCCAGAGGTGTCCTGAAACGCAAGAATCTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR-3UTR CAA 90 bp | TTATTCCTGAAGTCACTAACTCTCCTGCCTGCCACTTCACAAATCTGCCCTGAGCCAGCCTCTCTGCTCTaGCTTGCTTGTGCTTCTGTC | + |
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Preference number: 3 (lower is better) Translates to: LFLKSLTLLPATSQICPEPASLL*LACASV Trigger: GACAGAAGCACAAGCAAGCAAGAGCAGAGAGGCTGG...CTCAGGGCAGATTTGTGAAGTGGCAGGCAGGAGAGTTAGTGACTTCAGGAATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR TCA 72 bp | ACCAAGTGTTCAAGCCAGACACTTAGGATTTGTGCTTaGCTTTCCCTAGCCCATCTCTCACTGCCAACGAAG | + |
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Preference number: 3 (lower is better) Translates to: TKCSSQTLRICA*LSLAHLSLPTK Trigger: CTTCGTTGGCAGTGAGAGATGGGCTAGGGAAAGTCAAGCACAAATCCTAAGTGTCTGGCTTGAACACTTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR GCA 72 bp | CACACTGTTTGCCCTTTGGAGTCTTACAATCTTCCATaGAAGTCTACTCCTAGCTGGATTTCCCTCCCACCT | + |
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Preference number: 3 (lower is better) Translates to: HTVCPLESYNLP*KSTPSWISLPP Trigger: AGGTGGGAGGGAAATCCAGCTAGGAGTAGACTTGCATGGAAGATTGTAAGACTCCAAAGGGCAAACAGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR TCA 72 bp | TGCAACCTTCAGTCCCCTGAATGTGTGGTTGCTCATTaGCTTACTTGCAAGACTCCCTCACTAAACTGTGAC | + |
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Preference number: 3 (lower is better) Translates to: CNLQSPECVVAH*LTCKTPSLNCD Trigger: GTCACAGTTTAGTGAGGGAGTCTTGCAAGTAAGTCAATGAGCAACCACACATTCAGGGGACTGAAGGTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR TCA 72 bp | TCCTCATCATCAGCGACCTCACAACTCTACCACTTCTaGCTTGGTTCCTTCTTCCTTAAGAGACTCTACTGC | + |
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Preference number: 3 (lower is better) Translates to: SSSSATSQLYHF*LGSFFLKRLYC Trigger: GCAGTAGAGTCTCTTAAGGAAGAAGGAACCAAGTCAGAAGTGGTAGAGTTGTGAGGTCGCTGATGATGAGGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR TCA 72 bp | AGTCAAACTGCAAGCAGAGCATATTGTTCTCAGGAATaGCAGGCCTTCTCACCACACACTGTTTGCCCTTTG | + |
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Preference number: 3 (lower is better) Translates to: SQTASRAYCSQE*QAFSPHTVCPL Trigger: CAAAGGGCAAACAGTGTGTGGTGAGAAGGCCTGTCATTCCTGAGAACAATATGCTCTGCTTGCAGTTTGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR CCA 72 bp | TGCTTCTTTTGTGCAACCTTCAGTCCCCTGAATGTGTaGTTGCTCATTGACTTACTTGCAAGACTCCCTCAC | + |
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Preference number: 3 (lower is better) Translates to: CFFCATFSPLNV*LLIDLLARLPH Trigger: GTGAGGGAGTCTTGCAAGTAAGTCAATGAGCAACCACACATTCAGGGGACTGAAGGTTGCACAAAAGAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR CCA 72 bp | GAGTCTTACAATCTTCCATGCAAGTCTACTCCTAGCTaGATTTCCCTCCCACCTTTGCCTACAGACCATCAA | + |
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Preference number: 3 (lower is better) Translates to: ESYNLPCKSTPS*ISLPPLPTDHQ Trigger: TTGATGGTCTGTAGGCAAAGGTGGGAGGGAAATCCAGCTAGGAGTAGACTTGCATGGAAGATTGTAAGACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR-3UTR CAA 90 bp | AGAGGTTTATCCATCTTTCATCTCCAGCTTCCACCACATTATCTAATGATACTCCCTCTCTGCTCTTGCTaGCTTGTGCTTCTGTCTGGC | + |
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Preference number: 3 (lower is better) Translates to: RGLSIFHLQLPPHYLMILPLCSC*LVLLSG Trigger: GCCAGACAGAAGCACAAGCAAGCAAGAGCAGAGAGG...GAGTATCATTAGATAATGTGGTGGAAGCTGGAGATGAAAGATGGATAAACCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR-3UTR CAA 90 bp | TTATTCCTGAAGTCACTAACTCTCCTGCCTGCCACTTCACAAATCTGCCCTGAGTCTACCACTTCTGACTaGGTTCCTTCTTCCTTAAGA | + |
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Preference number: 3 (lower is better) Translates to: LFLKSLTLLPATSQICPESTTSD*VPSSLR Trigger: TCTTAAGGAAGAAGGAACCAAGTCAGAAGTGGTAGA...CTCAGGGCAGATTTGTGAAGTGGCAGGCAGGAGAGTTAGTGACTTCAGGAATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR GCA 72 bp | CTCCTCTGCCATGTCTCAACTCTTGAAATACAAGCTTaGAGCATTCTTGCACCGTTTACATCTTCCAAACCC | + |
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Preference number: 3 (lower is better) Translates to: LLCHVSTLEIQA*SILAPFTSSKP Trigger: GGGTTTGGAAGATGTAAACGGTGCAAGAATGCTGCAAGCTTGTATTTCAAGAGTTGAGACATGGCAGAGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR CCA 72 bp | AATGACAGGCCTTCTCACCACACACTGTTTGCCCTTTaGAGTCTTACAATCTTCCATGCAAGTCTACTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: NDRPSHHTLFAL*SLTIFHASLLL Trigger: TAGGAGTAGACTTGCATGGAAGATTGTAAGACTCCAAAGGGCAAACAGTGTGTGGTGAGAAGGCCTGTCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR-3UTR CAA 90 bp | AGTATTTCTCAGGCTATTTACAACTCCAGCTCCTTTCTCTCTGATTCTCAGAGACCCTCCATATTCTGCTaGCTGAAGTGTTTACTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SISQAIYNSSSFLSDSQRPSIFC*LKCLLL Trigger: CAGCAGTAAACACTTCAGCAAGCAGAATATGGAGGG...TCTCTGAGAATCAGAGAGAAAGGAGCTGGAGTTGTAAATAGCCTGAGAAATACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR-3UTR CAA 90 bp | AATAGTACAGAGAAGTCAAACTGCAAGCAGAGCATATTGTTCTCAGGAATGACAATTTCCCTCCCACCTTaGCCTACAGACCATCAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: NSTEKSNCKQSILFSGMTISLPP*PTDHQG Trigger: ACCTTGATGGTCTGTAGGCAAAGGTGGGAGGGAAAT...TGTCATTCCTGAGAACAATATGCTCTGCTTGCAGTTTGACTTCTCTGTACTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR GCA 72 bp | AAATATCTATCAACCATACTTTCAATCCCAGATTCTTaGGTTTCAGGACACCTCTGGGGGTTTGATCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: KYLSTILSIPDS*VSGHLWGFDLL Trigger: CAGCAGATCAAACCCCCAGAGGTGTCCTGAAACGCAAGAATCTGGGATTGAAAGTATGGTTGATAGATATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR-3UTR CAA 90 bp | CATGTCTCAACTCTTGAAATACAAGCTTGCAGCATTCTTGCACCGTTTACATCTCTTCTTTTGCTTCTTTaGTGCAACCTTCAGTCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: HVSTLEIQACSILAPFTSLLLLL*CNLQSP Trigger: AGGGGACTGAAGGTTGCACAAAAGAAGCAAAAGAAG...AGATGTAAACGGTGCAAGAATGCTGCAAGCTTGTATTTCAAGAGTTGAGACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR GCA 72 bp | AGAGAAATGCTCAGTAATAGTACAGAGAAGTCAAACTaGAAGCAGAGCATATTGTTCTCAGGAATGACAGGC | + |
|
Preference number: 3 (lower is better) Translates to: REMLSNSTEKSN*KQSILFSGMTG Trigger: GCCTGTCATTCCTGAGAACAATATGCTCTGCTTGCAGTTTGACTTCTCTGTACTATTACTGAGCATTTCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR TCA 72 bp | GTCAAGCCTATTAGCCTAAGCCTTGGGCATCTTATCTaGATGGCTGATATTATTATTTACCAAGTGTTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: VKPISLSLGHLI*MADIIIYQVFK Trigger: CTTGAACACTTGGTAAATAATAATATCAGCCATTCAGATAAGATGCCCAAGGCTTAGGCTAATAGGCTTGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR TCA 72 bp | GTGGTGAAGATTCAGCATCACAAAGCCTACAAAGGCTaGTTAATGCAGTCCCTTATAGTTACAAAACTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: VVKIQHHKAYKG*LMQSLIVTKLL Trigger: AAGAAGTTTTGTAACTATAAGGGACTGCATTAATCAGCCTTTGTAGGCTTTGTGATGCTGAATCTTCACCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| CDS-3UTR GCA 90 bp | CCTCCCAGCCTCTCTGCTCTTGCTTGCTTGTGCTTCTGTCTGGCTAGCTGTACCTCTGCAATGAAATCATaGAGCTCTCCTTCAGTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PPSLSALACLCFCLASCTSAMKS*SSPSVG Trigger: CCCGACTGAAGGAGAGCTGCATGATTTCATTGCAGA...GGTACAGCTAGCCAGACAGAAGCACAAGCAAGCAAGAGCAGAGAGGCTGGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR CAA 72 bp | CCCACCAGAAAGCACCCTCATCCCACCAGGCTTCTTTaGCTTCTTTTGTGCAACCTTCAGTCCCCTGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: PTRKHPHPTRLL*LLLCNLQSPEC Trigger: ACATTCAGGGGACTGAAGGTTGCACAAAAGAAGCAAAAGAAGCCTGGTGGGATGAGGGTGCTTTCTGGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR CAA 72 bp | TGCAAGTCTACTCCTAGCTGGATTTCCCTCCCACCTTaGCCTACAGACCATCAAGGTCACTCATTTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CKSTPSWISLPP*PTDHQGHSFLL Trigger: CAGCAGAAATGAGTGACCTTGATGGTCTGTAGGCAAAGGTGGGAGGGAAATCCAGCTAGGAGTAGACTTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| CDS-3UTR TCA 90 bp | CCTCCCAGCCTCTCTGCTCTTGCTTGCTTGTGCTTCTGTCTGGCTAGCTGTACCCTTCAAATGCGTCTTTaGTCTTCTTATGAAGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PPSLSALACLCFCLASCTLQMRL*SSYEVL Trigger: CAGAACTTCATAAGAAGATCAAAGACGCATTTGAAG...GGTACAGCTAGCCAGACAGAAGCACAAGCAAGCAAGAGCAGAGAGGCTGGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| CDS-3UTR CCA 90 bp | AGCATTCTTGCACCGTTTACATCTTCCAAACCCCTCCCCTCTACCTTCTCTCTCATCGAATGTAGCCAGTaGGTTCTTCTTCCTCTATCT | + |
|
Preference number: 4 (lower is better) Translates to: SILAPFTSSKPLPSTFSLIECSQ*VLLPLS Trigger: AGATAGAGGAAGAAGAACCCACTGGCTACATTCGAT...GAGAGAGAAGGTAGAGGGGAGGGGTTTGGAAGATGTAAACGGTGCAAGAATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR CAA 72 bp | CTGAGTGTCCTCTGCTCCTCTGCCATGTCTCAACTCTaGAAATACAAGCTTGCAGCATTCTTGCACCGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LSVLCSSAMSQL*KYKLAAFLHRL Trigger: TAAACGGTGCAAGAATGCTGCAAGCTTGTATTTCAAGAGTTGAGACATGGCAGAGGAGCAGAGGACACTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR CAA 72 bp | TTCTCAGGAATGACAGGCCTTCTCACCACACACTGTTaGCCCTTTGGAGTCTTACAATCTTCCATGCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: FSGMTGLLTTHC*PFGVLQSSMQV Trigger: GACTTGCATGGAAGATTGTAAGACTCCAAAGGGCAAACAGTGTGTGGTGAGAAGGCCTGTCATTCCTGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| CDS-3UTR GCA 90 bp | AGCATTCTTGCACCGTTTACATCTTCCAAACCCCTCCCCTCTACCTTCTCTCTCTTCTTCCTCTATCTCTaGAATGAAATCATGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SILAPFTSSKPLPSTFSLFFLYL*NEIMQL Trigger: GAGCTGCATGATTTCATTGCAGAGATAGAGGAAGAA...GAGAGAGAAGGTAGAGGGGAGGGGTTTGGAAGATGTAAACGGTGCAAGAATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| CDS-3UTR CCA 90 bp | CCAGCTGGTCTCCTTCCCTCTGGCCTTGACCCTTCAAAGTATTTCTCAGGCTATGTATTATTCGATTCATaGTCGAACACTTCAAATGCG | + |
|
Preference number: 4 (lower is better) Translates to: PAGLLPSGLDPSKYFSGYVLFDS*SNTSNA Trigger: CGCATTTGAAGTGTTCGACCATGAATCGAATAATAC...ATAGCCTGAGAAATACTTTGAAGGGTCAAGGCCAGAGGGAAGGAGACCAGCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR CAA 72 bp | ATGTCTCAACTCTTGAAATACAAGCTTGCAGCATTCTaGCACCGTTTACATCTTCCAAACCCCTCCCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: MSQLLKYKLAAF*HRLHLPNPSPL Trigger: TAGAGGGGAGGGGTTTGGAAGATGTAAACGGTGCAAGAATGCTGCAAGCTTGTATTTCAAGAGTTGAGACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR CAA 72 bp | AATAGTACAGAGAAGTCAAACTGCAAGCAGAGCATATaGTTCTCAGGAATGACAGGCCTTCTCACCACACAC | + |
|
Preference number: 4 (lower is better) Translates to: NSTEKSNCKQSI*FSGMTGLLTTH Trigger: GTGTGTGGTGAGAAGGCCTGTCATTCCTGAGAACAATATGCTCTGCTTGCAGTTTGACTTCTCTGTACTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| CDS-3UTR CCA 90 bp | AGCATATTGTTCTCAGGAATGACAGGCCTTCTCACCACACACTGTTTGCCCTTTGATATCTTCAGCAGCTaGTCTGTATCTTCTTTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: SILFSGMTGLLTTHCLPFDIFSS*SVSSFY Trigger: GTAGAAAGAAGATACAGACCAGCTGCTGAAGATATC...AAAGGGCAAACAGTGTGTGGTGAGAAGGCCTGTCATTCCTGAGAACAATATGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| CDS-3UTR TCA 90 bp | AGCATATTGTTCTCAGGAATGACAGGCCTTCTCACCACACACTGTTTGCCCTTTATAATTAATGGTGTTTaGTTCGGGATCAATTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SILFSGMTGLLTTHCLPFIINGV*FGINCS Trigger: GCTGCAATTGATCCCGAATCAAACACCATTAATTAT...AAAGGGCAAACAGTGTGTGGTGAGAAGGCCTGTCATTCCTGAGAACAATATGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| 3UTR CAA 72 bp | TTCACCATCTTGACTCACTACAACACTCTACATATTTaGCTTCTGGGCCAGTGTTACTGGACAAAATCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FTILTHYNTLHI*LLGQCYWTKSL Trigger: CAAGGATTTTGTCCAGTAACACTGGCCCAGAAGCAAAATATGTAGAGTGTTGTAGTGAGTCAAGATGGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| CDS-3UTR GCA 90 bp | AATAGTACAGAGAAGTCAAACTGCAAGCAGAGCATATTGTTCTCAGGAATGACAGTCGAACACTTCAAATaGGTCTTTGATCTTCTTATG | + |
|
Preference number: 4 (lower is better) Translates to: NSTEKSNCKQSILFSGMTVEHFK*VFDLLM Trigger: CATAAGAAGATCAAAGACGCATTTGAAGTGTTCGAC...TGTCATTCCTGAGAACAATATGCTCTGCTTGCAGTTTGACTTCTCTGTACTATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| CDS-3UTR CCA 90 bp | AGAGGTTTATCCATCTTTCATCTCCAGCTTCCACCACATTATCTAATGATACTCGGCTCTGGTCATCACTaGAATAAATTTTTCAAATCG | + |
|
Preference number: 4 (lower is better) Translates to: RGLSIFHLQLPPHYLMILGSGHH*NKFFKS Trigger: CGATTTGAAAAATTTATTCCAGTGATGACCAGAGCC...GAGTATCATTAGATAATGTGGTGGAAGCTGGAGATGAAAGATGGATAAACCTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| CDS-3UTR CAA 90 bp | AGCATTCTTGCACCGTTTACATCTTCCAAACCCCTCCCCTCTACCTTCTCTCTCTCCTCAGTCATGTACTaGACAAGTTCATCCTTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SILAPFTSSKPLPSTFSLSSVMY*TSSSLV Trigger: CACTAAGGATGAACTTGTCAAGTACATGACTGAGGA...GAGAGAGAAGGTAGAGGGGAGGGGTTTGGAAGATGTAAACGGTGCAAGAATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| CDS CCA 90 bp | TGGATCCAAAACCTCGAAAGCTCGCAAAAGGATATCTTCAGCAGCTaGTCTGTATCTTCTTTCTACAAGGGCTCTGGTCATCACTGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: WIQNLESSQKDIFSS*SVSSFYKGSGHHWN Trigger: ATTCCAGTGATGACCAGAGCCCTTGTAGAAAGAAGATACAGACCAGCTGCTGAAGATATCCTTTTGCGAGCTTTCGAGGTTTTGGATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| CDS CCA 90 bp | CATGTACTTGACAAGTTCATCCTTAGTGAGAAACCCGCGTTTAGCTaGATCCAAAACCTCGAAAGCTCGCAAAAGGATATCTTCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HVLDKFILSEKPAFS*IQNLESSQKDIFSS Trigger: GCTGCTGAAGATATCCTTTTGCGAGCTTTCGAGGTTTTGGATCCAGCTAAACGCGGGTTTCTCACTAAGGATGAACTTGTCAAGTACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| CDS-3UTR CAA 90 bp | AGTATTTCTCAGGCTATTTACAACTCCAGCTCCTTTCTCTCTGATTCTCAGAGATTCTTCCATTTCCTCTaGGGAAAAAGGCTCACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SISQAIYNSSSFLSDSQRFFHFL*GKRLTF Trigger: GAAGGTGAGCCTTTTTCCCAAGAGGAAATGGAAGAA...TCTCTGAGAATCAGAGAGAAAGGAGCTGGAGTTGTAAATAGCCTGAGAAATACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| CDS TCA 90 bp | CTACTGTATTATTCGATTCATGGTCGAACACTTCAAATGCGTCTTTaGTCTTCTTATGAAGTTCTGCAATTAGTGCCTCTGTCCCTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: LLYYSIHGRTLQMRL*SSYEVLQLVPLSLP Trigger: CGGAAGGGACAGAGGCACTAATTGCAGAACTTCATAAGAAGATCAAAGACGCATTTGAAGTGTTCGACCATGAATCGAATAATACAGTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| CDS-3UTR CAA 90 bp | AATAGTACAGAGAAGTCAAACTGCAAGCAGAGCATATTGTTCTCAGGAATGACATTGATTCGGGATCAATaGCAGCAGACAACATTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: NSTEKSNCKQSILFSGMTLIRDQ*QQTTFL Trigger: AAGAAATGTTGTCTGCTGCAATTGATCCCGAATCAA...TGTCATTCCTGAGAACAATATGCTCTGCTTGCAGTTTGACTTCTCTGTACTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| CDS-3UTR CAA 90 bp | AGTATTTCTCAGGCTATTTACAACTCCAGCTCCTTTCTCTCTGATTCTCAGAGACATCTACCACCATCATaGTTATGTAGTCCCTATAAT | + |
|
Preference number: 5 (lower is better) Translates to: SISQAIYNSSSFLSDSQRHLPPS*LCSPYN Trigger: ATTATAGGGACTACATAACAATGATGGTGGTAGATG...TCTCTGAGAATCAGAGAGAAAGGAGCTGGAGTTGTAAATAGCCTGAGAAATACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| CDS GCA 72 bp | GTGGGTTCTTCTTCCTCTATCTCTGCAATGAAATCATaGAGCTCTCCTTCAGTCGGGCAGCATCCTAATGAC | + |
|
Preference number: 6 (lower is better) Translates to: VGSSSSISAMKS*SSPSVGQHPND Trigger: GTCATTAGGATGCTGCCCGACTGAAGGAGAGCTGCATGATTTCATTGCAGAGATAGAGGAAGAAGAACCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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| CDS TCA 72 bp | TATTCGATTCATGGTCGAACACTTCAAATGCGTCTTTaGTCTTCTTATGAAGTTCTGCAATTAGTGCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: YSIHGRTLQMRL*SSYEVLQLVPL Trigger: CAGAGGCACTAATTGCAGAACTTCATAAGAAGATCAAAGACGCATTTGAAGTGTTCGACCATGAATCGAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027775.9 |
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