Pregenerated sensors for EFCAB15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020940Ensembl transcript IDs: ENSMUST00000021323.11, ENSMUST00000107026.9, ENSMUST00000172850.8, ENSMUST00000174567.3
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGGCCTTGGGCGCCCGGCGAGGTTGGGGATCTGAGTGTAGGGGCTaGGCCCACCTGCTCTGCACAGTGTGTGCAGGGAGCGCGCCAGCT | + |
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Preference number: 1 (lower is better) Translates to: LALGARRGWGSECRG*AHLLCTVCAGSAPA Trigger: AGCTGGCGCGCTCCCTGCACACACTGTGCAGAGCAGGTGGGCGCAGCCCCTACACTCAGATCCCCAACCTCGCCGGGCGCCCAAGGCCAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172850.8 |
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| 3UTR GCA 90 bp | CGGCGAGGTTGGGGATCTGAGTGTAGGGGCTGCGCCCACCTGCTCTaGACAGTGTGTGCAGGGAGCGCGCCAGCTGAGAGCTGGAGAGGC | + |
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Preference number: 1 (lower is better) Translates to: RRGWGSECRGCAHLL*TVCAGSAPAESWRG Trigger: GCCTCTCCAGCTCTCAGCTGGCGCGCTCCCTGCACACACTGTGCAGAGCAGGTGGGCGCAGCCCCTACACTCAGATCCCCAACCTCGCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172850.8 |
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| 3UTR TCA 90 bp | CTGCGCCCACCTGCTCTGCACAGTGTGTGCAGGGAGCGCGCCAGCTaGGAGCTGGAGAGGCCATTGAGGCGCGCAGCTTGGCAGAAGAAG | + |
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Preference number: 1 (lower is better) Translates to: LRPPALHSVCRERAS*ELERPLRRAAWQKK Trigger: CTTCTTCTGCCAAGCTGCGCGCCTCAATGGCCTCTCCAGCTCTCAGCTGGCGCGCTCCCTGCACACACTGTGCAGAGCAGGTGGGCGCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172850.8 |
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| 3UTR CAA 90 bp | GGAGCGCGCCAGCTGAGAGCTGGAGAGGCCATTGAGGCGCGCAGCTaGGCAGAAGAAGGTGAGGCCCGTGTGCGCACGCGCAGGCCGGCC | + |
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Preference number: 2 (lower is better) Translates to: GARQLRAGEAIEARS*AEEGEARVRTRRPA Trigger: GGCCGGCCTGCGCGTGCGCACACGGGCCTCACCTTCTTCTGCCAAGCTGCGCGCCTCAATGGCCTCTCCAGCTCTCAGCTGGCGCGCTCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172850.8 |
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| 3UTR GCA 72 bp | AGGCGCGCAGCTTGGCAGAAGAAGGTGAGGCCCGTGTaGGCACGCGCAGGCCGGCCCTGGCGCGCCCGGTTC | + |
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Preference number: 3 (lower is better) Translates to: RRAAWQKKVRPV*ARAGRPWRARF Trigger: GAACCGGGCGCGCCAGGGCCGGCCTGCGCGTGCGCACACGGGCCTCACCTTCTTCTGCCAAGCTGCGCGCCT 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172850.8 |
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| 3UTR GCA 72 bp | TGGGGATCTGAGTGTAGGGGCTGCGCCCACCTGCTCTaGACAGTGTGTGCAGGGAGCGCGCCAGCTGAGAGC | + |
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Preference number: 3 (lower is better) Translates to: WGSECRGCAHLL*TVCAGSAPAES Trigger: GCTCTCAGCTGGCGCGCTCCCTGCACACACTGTGCAGAGCAGGTGGGCGCAGCCCCTACACTCAGATCCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172850.8 |
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| CDS-3UTR TCA 90 bp | CCCGTGTGCGCACGCGCAGGCCGGCCCTGGCGCGCCCGGTTCCGAGCGCACAAGCCTGTCATCCGGCCCTaGCCAGTATGGCTGGTTAGC | + |
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Preference number: 4 (lower is better) Translates to: PVCARAGRPWRARFRAHKPVIRP*PVWLVS Trigger: GCTAACCAGCCATACTGGTCAGGGCCGGATGACAGG...CTTGTGCGCTCGGAACCGGGCGCGCCAGGGCCGGCCTGCGCGTGCGCACACGGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172850.8 |
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| CDS-3UTR GCA 90 bp | GAAGAAGGTGAGGCCCGTGTGCGCACGCGCAGGCCGGCCCTGGCGCGCCCGGTTGATATCCTGGAAGGCTaGCAGCTGCCGGGGTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: EEGEARVRTRRPALARPVDILEG*QLPGCQ Trigger: CTGACACCCCGGCAGCTGGCAGCCTTCCAGGATATC...AACCGGGCGCGCCAGGGCCGGCCTGCGCGTGCGCACACGGGCCTCACCTTCTTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172850.8 |
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| CDS-3UTR GCA 90 bp | AGGGGCTGCGCCCACCTGCTCTGCACAGTGTGTGCAGGGAGCGCGCCAGCTGAGGACTGCTGGCCTATCTaGGGCTGCACCCGCCCCTTT | + |
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Preference number: 4 (lower is better) Translates to: RGCAHLLCTVCAGSAPAEDCWPI*GCTRPF Trigger: AAAGGGGCGGGTGCAGCCGCAGATAGGCCAGCAGTC...CTCAGCTGGCGCGCTCCCTGCACACACTGTGCAGAGCAGGTGGGCGCAGCCCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172850.8 |
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| CDS-3UTR CCA 90 bp | AGGGGCTGCGCCCACCTGCTCTGCACAGTGTGTGCAGGGAGCGCGCCAGCTGAGCTCGCACATCTCCTGTaGGCCCAGCTGGATACCCGC | + |
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Preference number: 4 (lower is better) Translates to: RGCAHLLCTVCAGSAPAELAHLL*AQLDTR Trigger: GCGGGTATCCAGCTGGGCCCACAGGAGATGTGCGAG...CTCAGCTGGCGCGCTCCCTGCACACACTGTGCAGAGCAGGTGGGCGCAGCCCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172850.8 |
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| 3UTR CAA 72 bp | CAGCTGAGAGCTGGAGAGGCCATTGAGGCGCGCAGCTaGGCAGAAGAAGGTGAGGCCCGTGTGCGCACGCGC | + |
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Preference number: 4 (lower is better) Translates to: QLRAGEAIEARS*AEEGEARVRTR Trigger: GCGCGTGCGCACACGGGCCTCACCTTCTTCTGCCAAGCTGCGCGCCTCAATGGCCTCTCCAGCTCTCAGCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172850.8 |
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| CDS-3UTR GCA 90 bp | AGGGGCTGCGCCCACCTGCTCTGCACAGTGTGTGCAGGGAGCGCGCCAGCTGAGAGATCTGACTGGGACTaGTGGCCTATCTGCGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: RGCAHLLCTVCAGSAPAERSDWD*WPICGC Trigger: GCAGCCGCAGATAGGCCAGCAGTCCCAGTCAGATCT...CTCAGCTGGCGCGCTCCCTGCACACACTGTGCAGAGCAGGTGGGCGCAGCCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172850.8 |
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| CDS-3UTR CCA 90 bp | TTGGCAGAAGAAGGTGAGGCCCGTGTGCGCACGCGCAGGCCGGCCCTGGCGCGCATTCCGAGGCTTCTGTaGAGGCCTTCTCAGTGTCGA | + |
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Preference number: 4 (lower is better) Translates to: LAEEGEARVRTRRPALARIPRLL*RPSQCR Trigger: TCGACACTGAGAAGGCCTCCACAGAAGCCTCGGAAT...GCGCGCCAGGGCCGGCCTGCGCGTGCGCACACGGGCCTCACCTTCTTCTGCCAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172850.8 |
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| CDS-3UTR GCA 90 bp | GAAGAAGGTGAGGCCCGTGTGCGCACGCGCAGGCCGGCCCTGGCGCGCCCGGTTGCAGGGCAATTTTCATaGTTTGCATGTCCACAGTGC | + |
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Preference number: 4 (lower is better) Translates to: EEGEARVRTRRPALARPVAGQFS*FACPQC Trigger: GCACTGTGGACATGCAAAGCATGAAAATTGCCCTGC...AACCGGGCGCGCCAGGGCCGGCCTGCGCGTGCGCACACGGGCCTCACCTTCTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172850.8 |
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| CDS-3UTR TCA 90 bp | GCAGAAGAAGGTGAGGCCCGTGTGCGCACGCGCAGGCCGGCCCTGGCGCGCCCGCTTCAGAAGGATTCTTaGGATCTCTCATCCTCAGTA | + |
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Preference number: 4 (lower is better) Translates to: AEEGEARVRTRRPALARPLQKDS*DLSSSV Trigger: TACTGAGGATGAGAGATCTCAAGAATCCTTCTGAAG...CGGGCGCGCCAGGGCCGGCCTGCGCGTGCGCACACGGGCCTCACCTTCTTCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172850.8 |
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| CDS-3UTR TCA 90 bp | AGGGGCTGCGCCCACCTGCTCTGCACAGTGTGTGCAGGGAGCGCGCCAGCTGAGGGGCCTGCTGCTTCTTaGAATAGTAGCCATGCACTG | + |
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Preference number: 4 (lower is better) Translates to: RGCAHLLCTVCAGSAPAEGPAAS*NSSHAL Trigger: CAGTGCATGGCTACTATTTCAAGAAGCAGCAGGCCC...CTCAGCTGGCGCGCTCCCTGCACACACTGTGCAGAGCAGGTGGGCGCAGCCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172850.8 |
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| CDS-3UTR GCA 90 bp | TGTAGGGGCTGCGCCCACCTGCTCTGCACAGTGTGTGCAGGGAGCGCGCCAGCTGCTGGATACCCGCGTTaGGCAGGGCAATTTTCATGC | + |
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Preference number: 4 (lower is better) Translates to: CRGCAHLLCTVCAGSAPAAGYPR*AGQFSC Trigger: GCATGAAAATTGCCCTGCGCAACGCGGGTATCCAGC...AGCTGGCGCGCTCCCTGCACACACTGTGCAGAGCAGGTGGGCGCAGCCCCTACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172850.8 |
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| CDS-3UTR CCA 90 bp | TGTAGGGGCTGCGCCCACCTGCTCTGCACAGTGTGTGCAGGGAGCGCGCCAGCTAGTTTGAAGATATCCTaGAAGGCTGCCAGCTGCCGG | + |
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Preference number: 4 (lower is better) Translates to: CRGCAHLLCTVCAGSAPASLKIS*KAASCR Trigger: CCGGCAGCTGGCAGCCTTCCAGGATATCTTCAAACT...AGCTGGCGCGCTCCCTGCACACACTGTGCAGAGCAGGTGGGCGCAGCCCCTACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172850.8 |
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| CDS-3UTR CCA 90 bp | GGCTGCGCCCACCTGCTCTGCACAGTGTGTGCAGGGAGCGCGCCAGCTGAGAGCGTCCACAGTGCCTGTTaGGCTGCAACTGAACAGTTT | + |
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Preference number: 4 (lower is better) Translates to: GCAHLLCTVCAGSAPAESVHSAC*AATEQF Trigger: AAACTGTTCAGTTGCAGCCCAACAGGCACTGTGGAC...GCTCTCAGCTGGCGCGCTCCCTGCACACACTGTGCAGAGCAGGTGGGCGCAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172850.8 |
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| CDS-3UTR TCA 90 bp | CCCACCTGCTCTGCACAGTGTGTGCAGGGAGCGCGCCAGCTGAGAGCTGGAGAGATAGTAGCCATGCACTaGGCCAGACGGTGGTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: PTCSAQCVQGARQLRAGEIVAMH*ARRWLS Trigger: TGACAACCACCGTCTGGCTCAGTGCATGGCTACTAT...CTCTCCAGCTCTCAGCTGGCGCGCTCCCTGCACACACTGTGCAGAGCAGGTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172850.8 |
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| CDS-3UTR GCA 90 bp | CTGCTCTGCACAGTGTGTGCAGGGAGCGCGCCAGCTGAGAGCTGGAGAGGCCATTGCACCCTGCCAGCCTaGTCCTTGAATGCATCTCGT | + |
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Preference number: 4 (lower is better) Translates to: LLCTVCAGSAPAESWRGHCTLPA*SLNASR Trigger: ACGAGATGCATTCAAGGAGCAGGCTGGCAGGGTGCA...ATGGCCTCTCCAGCTCTCAGCTGGCGCGCTCCCTGCACACACTGTGCAGAGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172850.8 |
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| CDS-3UTR GCA 90 bp | ACCTGCTCTGCACAGTGTGTGCAGGGAGCGCGCCAGCTGAGAGCTGGAGAGGCCGCAATTTTCATGCTTTaGATGTCCACAGTGCCTGTT | + |
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Preference number: 4 (lower is better) Translates to: TCSAQCVQGARQLRAGEAAIFML*MSTVPV Trigger: AACAGGCACTGTGGACATGCAAAGCATGAAAATTGC...GGCCTCTCCAGCTCTCAGCTGGCGCGCTCCCTGCACACACTGTGCAGAGCAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172850.8 |
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| CDS TCA 90 bp | GCGGCTGGCTCGTTAGCCCGGCGGGAGGGCGGAGGGGACCTTTGCTaGGTGGCCCAAGGTTGGGAGGGAGCTTGGGGCGGCCTGGCTGTT | + |
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Preference number: 5 (lower is better) Translates to: AAGSLARREGGGDLC*VAQGWEGAWGGLAV Trigger: AACAGCCAGGCCGCCCCAAGCTCCCTCCCAACCTTGGGCCACTCAGCAAAGGTCCCCTCCGCCCTCCCGCCGGGCTAACGAGCCAGCCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021323.11 ENSMUST00000107026.9 |
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| CDS CCA 90 bp | CTGAGTGGCCCAAGGTTGGGAGGGAGCTTGGGGCGGCCTGGCTGTTaGGGCTTGGGGAGGCGGACGTCGGACCCTGGAACTCGAGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: LSGPRLGGSLGRPGC*GLGRRTSDPGTRAL Trigger: CAAGGCTCGAGTTCCAGGGTCCGACGTCCGCCTCCCCAAGCCCCAACAGCCAGGCCGCCCCAAGCTCCCTCCCAACCTTGGGCCACTCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021323.11 ENSMUST00000107026.9 |
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| CDS-3UTR CAA 90 bp | GAAGAAGGTGAGGCCCGTGTGCGCACGCGCAGGCCGGCCCTGGCGCGCCCGGTTAGCTGGATACCCGCGTaGCGCAGGGCAATTTTCATG | + |
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Preference number: 5 (lower is better) Translates to: EEGEARVRTRRPALARPVSWIPA*RRAIFM Trigger: CATGAAAATTGCCCTGCGCAACGCGGGTATCCAGCT...AACCGGGCGCGCCAGGGCCGGCCTGCGCGTGCGCACACGGGCCTCACCTTCTTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172850.8 |
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| CDS-3UTR CAA 90 bp | AGGGGCTGCGCCCACCTGCTCTGCACAGTGTGTGCAGGGAGCGCGCCAGCTGAGCTGCCAGCCTGCTCCTaGAATGCATCTCGTGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: RGCAHLLCTVCAGSAPAELPACS*NASRVR Trigger: CCTCACACGAGATGCATTCAAGGAGCAGGCTGGCAG...CTCAGCTGGCGCGCTCCCTGCACACACTGTGCAGAGCAGGTGGGCGCAGCCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172850.8 |
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| CDS-3UTR CAA 90 bp | TCTGCACAGTGTGTGCAGGGAGCGCGCCAGCTGAGAGCTGGAGAGGCCATTGAGCTGCACCCGCCCCTTTaGCACCCTGCCAGCCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: SAQCVQGARQLRAGEAIELHPPL*HPASLL Trigger: GAGCAGGCTGGCAGGGTGCAAAAGGGGCGGGTGCAG...CTCAATGGCCTCTCCAGCTCTCAGCTGGCGCGCTCCCTGCACACACTGTGCAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172850.8 |
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| CDS GCA 90 bp | CCTCGAGGAACAGGGTCTGCAGGCCCGGGGGCTCACCGACCCGATTaGCCTTCATTTGGCCCATGCACTGAGCCAGACGGTGGTTGTCAG | + |
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Preference number: 5 (lower is better) Translates to: PRGTGSAGPGAHRPD*PSFGPCTEPDGGCQ Trigger: CTGACAACCACCGTCTGGCTCAGTGCATGGGCCAAATGAAGGGCAATCGGGTCGGTGAGCCCCCGGGCCTGCAGACCCTGTTCCTCGAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021323.11 ENSMUST00000107026.9 |
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| CDS-3UTR CAA 90 bp | GTGCAGGGAGCGCGCCAGCTGAGAGCTGGAGAGGCCATTGAGGCGCGCAGCTTGGTCGATGGGGATCTCTaGGTCTTCTGGCCTCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: VQGARQLRAGEAIEARSLVDGDL*VFWPLL Trigger: CAGCAGAGGCCAGAAGACCAAGAGATCCCCATCGAC...CAAGCTGCGCGCCTCAATGGCCTCTCCAGCTCTCAGCTGGCGCGCTCCCTGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172850.8 |
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| CDS GCA 90 bp | GTGGTTGTGGCTGCTCCTAGATCTGACTGGGACTGCTGGCCTATCTaGGGCTGCACCCGCCCCTTTTGCACCCTGCCAGCCTGCTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: VVVAAPRSDWDCWPI*GCTRPFCTLPACSL Trigger: CAAGGAGCAGGCTGGCAGGGTGCAAAAGGGGCGGGTGCAGCCGCAGATAGGCCAGCAGTCCCAGTCAGATCTAGGAGCAGCCACAACCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021323.11 ENSMUST00000172850.8 ENSMUST00000174567.3 |
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| CDS GCA 90 bp | GTGGCTGCTCCTAGATCTGACTGGGACTGCTGGCCTATCTGCGGCTaGACCCGCCCCTTTTGCACCCTGCCAGCCTGCTCCTTGAATGCA | + |
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Preference number: 5 (lower is better) Translates to: VAAPRSDWDCWPICG*TRPFCTLPACSLNA Trigger: TGCATTCAAGGAGCAGGCTGGCAGGGTGCAAAAGGGGCGGGTGCAGCCGCAGATAGGCCAGCAGTCCCAGTCAGATCTAGGAGCAGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021323.11 ENSMUST00000172850.8 ENSMUST00000174567.3 |
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| CDS TCA 90 bp | CCCGGGGGCTCACCGACCCGATTGCCCTTCATTTGGCCCATGCACTaGGCCAGACGGTGGTTGTCAGTAAGGACACCGAGGAAGTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: PGGSPTRLPFIWPMH*ARRWLSVRTPRKSL Trigger: CAAGGACTTCCTCGGTGTCCTTACTGACAACCACCGTCTGGCTCAGTGCATGGGCCAAATGAAGGGCAATCGGGTCGGTGAGCCCCCGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021323.11 ENSMUST00000107026.9 |
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| CDS GCA 90 bp | CGGCTGCACCCGCCCCTTTTGCACCCTGCCAGCCTGCTCCTTGAATaGATCTCGTGTGAGGATATTCCGAGGCTTCTGTGGAGGCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: RLHPPLLHPASLLLE*ISCEDIPRLLWRPS Trigger: AGAAGGCCTCCACAGAAGCCTCGGAATATCCTCACACGAGATGCATTCAAGGAGCAGGCTGGCAGGGTGCAAAAGGGGCGGGTGCAGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021323.11 ENSMUST00000172850.8 ENSMUST00000174567.3 |
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| CDS GCA 90 bp | TCTGACTGGGACTGCTGGCCTATCTGCGGCTGCACCCGCCCCTTTTaGACCCTGCCAGCCTGCTCCTTGAATGCATCTCGTGTGAGGATA | + |
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Preference number: 5 (lower is better) Translates to: SDWDCWPICGCTRPF*TLPACSLNASRVRI Trigger: TATCCTCACACGAGATGCATTCAAGGAGCAGGCTGGCAGGGTGCAAAAGGGGCGGGTGCAGCCGCAGATAGGCCAGCAGTCCCAGTCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021323.11 ENSMUST00000172850.8 ENSMUST00000174567.3 |
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| CDS GCA 90 bp | TGGCCTATCTGCGGCTGCACCCGCCCCTTTTGCACCCTGCCAGCCTaGTCCTTGAATGCATCTCGTGTGAGGATATTCCGAGGCTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: WPICGCTRPFCTLPA*SLNASRVRIFRGFC Trigger: ACAGAAGCCTCGGAATATCCTCACACGAGATGCATTCAAGGAGCAGGCTGGCAGGGTGCAAAAGGGGCGGGTGCAGCCGCAGATAGGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021323.11 ENSMUST00000172850.8 ENSMUST00000174567.3 |
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| CDS CCA 90 bp | AAGTCAGCCAGCCGAAGAGCCTCGCACATCTCCTGTGGGCCCAGCTaGATACCCGCGTTGCGCAGGGCAATTTTCATGCTTTGCATGTCC | + |
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Preference number: 5 (lower is better) Translates to: KSASRRASHISCGPS*IPALRRAIFMLCMS Trigger: GGACATGCAAAGCATGAAAATTGCCCTGCGCAACGCGGGTATCCAGCTGGGCCCACAGGAGATGTGCGAGGCTCTTCGGCTGGCTGACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021323.11 ENSMUST00000107026.9 ENSMUST00000172850.8 ENSMUST00000174567.3 |
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| CDS-3UTR CAA 90 bp | GTGCAGGGAGCGCGCCAGCTGAGAGCTGGAGAGGCCATTGAGGCGCGCAGCTTGGCTTCAGAAGGATTCTaGAGATCTCTCATCCTCAGT | + |
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Preference number: 5 (lower is better) Translates to: VQGARQLRAGEAIEARSLASEGF*RSLILS Trigger: ACTGAGGATGAGAGATCTCAAGAATCCTTCTGAAGC...CAAGCTGCGCGCCTCAATGGCCTCTCCAGCTCTCAGCTGGCGCGCTCCCTGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172850.8 |
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| CDS-3UTR CAA 90 bp | ACCTGCTCTGCACAGTGTGTGCAGGGAGCGCGCCAGCTGAGAGCTGGAGAGGCCGGCAATTTTCATGCTTaGCATGTCCACAGTGCCTGT | + |
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Preference number: 5 (lower is better) Translates to: TCSAQCVQGARQLRAGEAGNFHA*HVHSAC Trigger: ACAGGCACTGTGGACATGCAAAGCATGAAAATTGCC...GGCCTCTCCAGCTCTCAGCTGGCGCGCTCCCTGCACACACTGTGCAGAGCAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172850.8 |
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| CDS GCA 90 bp | GAAGAGCCTCGCACATCTCCTGTGGGCCCAGCTGGATACCCGCGTTaGGCAGGGCAATTTTCATGCTTTGCATGTCCACAGTGCCTGTTG | + |
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Preference number: 5 (lower is better) Translates to: EEPRTSPVGPAGYPR*AGQFSCFACPQCLL Trigger: CAACAGGCACTGTGGACATGCAAAGCATGAAAATTGCCCTGCGCAACGCGGGTATCCAGCTGGGCCCACAGGAGATGTGCGAGGCTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021323.11 ENSMUST00000107026.9 ENSMUST00000172850.8 ENSMUST00000174567.3 |
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| CDS-3UTR CAA 90 bp | ACCTGCTCTGCACAGTGTGTGCAGGGAGCGCGCCAGCTGAGAGCTGGAGAGGCCCTGCAACTGAACAGTTaGAAGATATCCTGGAAGGCT | + |
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Preference number: 5 (lower is better) Translates to: TCSAQCVQGARQLRAGEALQLNS*KISWKA Trigger: AGCCTTCCAGGATATCTTCAAACTGTTCAGTTGCAG...GGCCTCTCCAGCTCTCAGCTGGCGCGCTCCCTGCACACACTGTGCAGAGCAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172850.8 |
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| CDS GCA 90 bp | GGGCCCAGCTGGATACCCGCGTTGCGCAGGGCAATTTTCATGCTTTaGATGTCCACAGTGCCTGTTGGGCTGCAACTGAACAGTTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: GPSWIPALRRAIFML*MSTVPVGLQLNSLK Trigger: CTTCAAACTGTTCAGTTGCAGCCCAACAGGCACTGTGGACATGCAAAGCATGAAAATTGCCCTGCGCAACGCGGGTATCCAGCTGGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021323.11 ENSMUST00000107026.9 ENSMUST00000172850.8 ENSMUST00000174567.3 |
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| CDS CCA 90 bp | TCCACAGTGCCTGTTGGGCTGCAACTGAACAGTTTGAAGATATCCTaGAAGGCTGCCAGCTGCCGGGGTGTCAGGGGTAGCAAGCTATCA | + |
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Preference number: 5 (lower is better) Translates to: STVPVGLQLNSLKIS*KAASCRGVRGSKLS Trigger: TGATAGCTTGCTACCCCTGACACCCCGGCAGCTGGCAGCCTTCCAGGATATCTTCAAACTGTTCAGTTGCAGCCCAACAGGCACTGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021323.11 ENSMUST00000107026.9 ENSMUST00000172850.8 ENSMUST00000174567.3 |
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| CDS CCA 90 bp | GTTGCGCAGGGCAATTTTCATGCTTTGCATGTCCACAGTGCCTGTTaGGCTGCAACTGAACAGTTTGAAGATATCCTGGAAGGCTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: VAQGNFHALHVHSAC*AATEQFEDILEGCQ Trigger: CTGGCAGCCTTCCAGGATATCTTCAAACTGTTCAGTTGCAGCCCAACAGGCACTGTGGACATGCAAAGCATGAAAATTGCCCTGCGCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021323.11 ENSMUST00000107026.9 ENSMUST00000172850.8 ENSMUST00000174567.3 |
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| CDS CAA 90 bp | TCCAGCGGCTGGCTCGTTAGCCCGGCGGGAGGGCGGAGGGGACCTTaGCTGAGTGGCCCAAGGTTGGGAGGGAGCTTGGGGCGGCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: SSGWLVSPAGGRRGP*LSGPRLGGSLGRPG Trigger: GCCAGGCCGCCCCAAGCTCCCTCCCAACCTTGGGCCACTCAGCAAAGGTCCCCTCCGCCCTCCCGCCGGGCTAACGAGCCAGCCGCTGGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021323.11 ENSMUST00000107026.9 |
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| CDS GCA 72 bp | GTTGGCGGGGAGGAAGCCAGCTTCGAGGGGCGCATTTaGTCCAGCGGCTGGCTCGTTAGCCCGGCGGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: VGGEEASFEGRI*SSGWLVSPAGG Trigger: CCCTCCCGCCGGGCTAACGAGCCAGCCGCTGGAGCAAATGCGCCCCTCGAAGCTGGCTTCCTCCCCGCCAAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021323.11 ENSMUST00000107026.9 |
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| CDS CAA 72 bp | TTGGGGAGGCGGACGTCGGACCCTGGAACTCGAGCCTaGCGTTCTGGCCTTGGGCGCCCGGCGAGGTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: LGRRTSDPGTRA*RSGLGRPARLG Trigger: CCCCAACCTCGCCGGGCGCCCAAGGCCAGAACGCAAGGCTCGAGTTCCAGGGTCCGACGTCCGCCTCCCCAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021323.11 ENSMUST00000107026.9 |
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| CDS CCA 72 bp | GAGCCTTGCGTTCTGGCCTTGGGCGCCCGGCGAGGTTaGGGATCTGAGTGTAGGGGCTGCGCCCACCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: EPCVLALGARRG*GSECRGCAHLL Trigger: GAGCAGGTGGGCGCAGCCCCTACACTCAGATCCCCAACCTCGCCGGGCGCCCAAGGCCAGAACGCAAGGCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021323.11 ENSMUST00000107026.9 |
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| CDS CAA 72 bp | TGGCTCGTTAGCCCGGCGGGAGGGCGGAGGGGACCTTaGCTGAGTGGCCCAAGGTTGGGAGGGAGCTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: WLVSPAGGRRGP*LSGPRLGGSLG Trigger: CCCCAAGCTCCCTCCCAACCTTGGGCCACTCAGCAAAGGTCCCCTCCGCCCTCCCGCCGGGCTAACGAGCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021323.11 ENSMUST00000107026.9 |
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| CDS GCA 72 bp | GCTGCTCCTAGATCTGACTGGGACTGCTGGCCTATCTaGGGCTGCACCCGCCCCTTTTGCACCCTGCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: AAPRSDWDCWPI*GCTRPFCTLPA Trigger: GGCTGGCAGGGTGCAAAAGGGGCGGGTGCAGCCGCAGATAGGCCAGCAGTCCCAGTCAGATCTAGGAGCAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021323.11 ENSMUST00000172850.8 ENSMUST00000174567.3 |
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| CDS GCA 72 bp | ACAGGGTCTGCAGGCCCGGGGGCTCACCGACCCGATTaGCCTTCATTTGGCCCATGCACTGAGCCAGACGGT | + |
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Preference number: 6 (lower is better) Translates to: TGSAGPGAHRPD*PSFGPCTEPDG Trigger: ACCGTCTGGCTCAGTGCATGGGCCAAATGAAGGGCAATCGGGTCGGTGAGCCCCCGGGCCTGCAGACCCTGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021323.11 ENSMUST00000107026.9 |
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| CDS CAA 72 bp | GGACTGCTGGCCTATCTGCGGCTGCACCCGCCCCTTTaGCACCCTGCCAGCCTGCTCCTTGAATGCATCTCG | + |
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Preference number: 6 (lower is better) Translates to: GLLAYLRLHPPL*HPASLLLECIS Trigger: CGAGATGCATTCAAGGAGCAGGCTGGCAGGGTGCAAAAGGGGCGGGTGCAGCCGCAGATAGGCCAGCAGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021323.11 ENSMUST00000172850.8 ENSMUST00000174567.3 |
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| CDS CAA 72 bp | CAGGCCCGGGGGCTCACCGACCCGATTGCCCTTCATTaGGCCCATGCACTGAGCCAGACGGTGGTTGTCAGT | + |
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Preference number: 6 (lower is better) Translates to: QARGLTDPIALH*AHALSQTVVVS Trigger: ACTGACAACCACCGTCTGGCTCAGTGCATGGGCCAAATGAAGGGCAATCGGGTCGGTGAGCCCCCGGGCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021323.11 ENSMUST00000107026.9 |
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| CDS CAA 90 bp | CAGGGTCTGCAGGCCCGGGGGCTCACCGACCCGATTGCCCTTCATTaGGCCCATGCACTGAGCCAGACGGTGGTTGTCAGTAAGGACACC | + |
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Preference number: 6 (lower is better) Translates to: QGLQARGLTDPIALH*AHALSQTVVVSKDT Trigger: GGTGTCCTTACTGACAACCACCGTCTGGCTCAGTGCATGGGCCAAATGAAGGGCAATCGGGTCGGTGAGCCCCCGGGCCTGCAGACCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021323.11 ENSMUST00000107026.9 |
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| CDS GCA 72 bp | CTCAGTAGTTTGAACAGCACCTCGAGGAACAGGGTCTaGAGGCCCGGGGGCTCACCGACCCGATTGCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: LSSLNSTSRNRV*RPGGSPTRLPF Trigger: GAAGGGCAATCGGGTCGGTGAGCCCCCGGGCCTGCAGACCCTGTTCCTCGAGGTGCTGTTCAAACTACTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021323.11 ENSMUST00000107026.9 |
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| CDS CCA 72 bp | TCCTCTTTAGTGGTTGTGGCTGCTCCTAGATCTGACTaGGACTGCTGGCCTATCTGCGGCTGCACCCGCCCC | + |
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Preference number: 6 (lower is better) Translates to: SSLVVVAAPRSD*DCWPICGCTRP Trigger: GGGGCGGGTGCAGCCGCAGATAGGCCAGCAGTCCCAGTCAGATCTAGGAGCAGCCACAACCACTAAAGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021323.11 ENSMUST00000172850.8 ENSMUST00000174567.3 |
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| CDS CAA 90 bp | ATCTGCGGCTGCACCCGCCCCTTTTGCACCCTGCCAGCCTGCTCCTaGAATGCATCTCGTGTGAGGATATTCCGAGGCTTCTGTGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: ICGCTRPFCTLPACS*NASRVRIFRGFCGG Trigger: GCCTCCACAGAAGCCTCGGAATATCCTCACACGAGATGCATTCAAGGAGCAGGCTGGCAGGGTGCAAAAGGGGCGGGTGCAGCCGCAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021323.11 ENSMUST00000172850.8 ENSMUST00000174567.3 |
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| CDS GCA 72 bp | TGCGGCTGCACCCGCCCCTTTTGCACCCTGCCAGCCTaGTCCTTGAATGCATCTCGTGTGAGGATATTCCGA | + |
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Preference number: 6 (lower is better) Translates to: CGCTRPFCTLPA*SLNASRVRIFR Trigger: TCGGAATATCCTCACACGAGATGCATTCAAGGAGCAGGCTGGCAGGGTGCAAAAGGGGCGGGTGCAGCCGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021323.11 ENSMUST00000172850.8 ENSMUST00000174567.3 |
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| CDS CAA 90 bp | CGAAGAGCCTCGCACATCTCCTGTGGGCCCAGCTGGATACCCGCGTaGCGCAGGGCAATTTTCATGCTTTGCATGTCCACAGTGCCTGTT | + |
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Preference number: 6 (lower is better) Translates to: RRASHISCGPSWIPA*RRAIFMLCMSTVPV Trigger: AACAGGCACTGTGGACATGCAAAGCATGAAAATTGCCCTGCGCAACGCGGGTATCCAGCTGGGCCCACAGGAGATGTGCGAGGCTCTTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021323.11 ENSMUST00000107026.9 ENSMUST00000172850.8 ENSMUST00000174567.3 |
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| CDS TCA 72 bp | TCACCGACCCGATTGCCCTTCATTTGGCCCATGCACTaGGCCAGACGGTGGTTGTCAGTAAGGACACCGAGG | + |
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Preference number: 6 (lower is better) Translates to: SPTRLPFIWPMH*ARRWLSVRTPR Trigger: CCTCGGTGTCCTTACTGACAACCACCGTCTGGCTCAGTGCATGGGCCAAATGAAGGGCAATCGGGTCGGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021323.11 ENSMUST00000107026.9 |
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| CDS GCA 72 bp | CCGCCCCTTTTGCACCCTGCCAGCCTGCTCCTTGAATaGATCTCGTGTGAGGATATTCCGAGGCTTCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: PPLLHPASLLLE*ISCEDIPRLLW Trigger: CCACAGAAGCCTCGGAATATCCTCACACGAGATGCATTCAAGGAGCAGGCTGGCAGGGTGCAAAAGGGGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021323.11 ENSMUST00000172850.8 ENSMUST00000174567.3 |
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| CDS GCA 72 bp | CGCACATCTCCTGTGGGCCCAGCTGGATACCCGCGTTaGGCAGGGCAATTTTCATGCTTTGCATGTCCACAG | + |
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Preference number: 6 (lower is better) Translates to: RTSPVGPAGYPR*AGQFSCFACPQ Trigger: CTGTGGACATGCAAAGCATGAAAATTGCCCTGCGCAACGCGGGTATCCAGCTGGGCCCACAGGAGATGTGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021323.11 ENSMUST00000107026.9 ENSMUST00000172850.8 ENSMUST00000174567.3 |
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| CDS CCA 72 bp | CCTGTTGGGCTGCAACTGAACAGTTTGAAGATATCCTaGAAGGCTGCCAGCTGCCGGGGTGTCAGGGGTAGC | + |
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Preference number: 6 (lower is better) Translates to: PVGLQLNSLKIS*KAASCRGVRGS Trigger: GCTACCCCTGACACCCCGGCAGCTGGCAGCCTTCCAGGATATCTTCAAACTGTTCAGTTGCAGCCCAACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021323.11 ENSMUST00000107026.9 ENSMUST00000172850.8 ENSMUST00000174567.3 |
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| CDS CAA 72 bp | TGCACCCGCCCCTTTTGCACCCTGCCAGCCTGCTCCTaGAATGCATCTCGTGTGAGGATATTCCGAGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: CTRPFCTLPACS*NASRVRIFRGF Trigger: GAAGCCTCGGAATATCCTCACACGAGATGCATTCAAGGAGCAGGCTGGCAGGGTGCAAAAGGGGCGGGTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021323.11 ENSMUST00000172850.8 ENSMUST00000174567.3 |
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| CDS GCA 72 bp | CTGAACAGTTTGAAGATATCCTGGAAGGCTGCCAGCTaGCGGGGTGTCAGGGGTAGCAAGCTATCATCCGCC | + |
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Preference number: 6 (lower is better) Translates to: LNSLKISWKAAS*RGVRGSKLSSA Trigger: GGCGGATGATAGCTTGCTACCCCTGACACCCCGGCAGCTGGCAGCCTTCCAGGATATCTTCAAACTGTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021323.11 ENSMUST00000107026.9 ENSMUST00000172850.8 ENSMUST00000174567.3 |
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| CDS GCA 72 bp | CCAGCTGGATACCCGCGTTGCGCAGGGCAATTTTCATaGTTTGCATGTCCACAGTGCCTGTTGGGCTGCAAC | + |
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Preference number: 6 (lower is better) Translates to: PAGYPRCAGQFS*FACPQCLLGCN Trigger: GTTGCAGCCCAACAGGCACTGTGGACATGCAAAGCATGAAAATTGCCCTGCGCAACGCGGGTATCCAGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021323.11 ENSMUST00000107026.9 ENSMUST00000172850.8 ENSMUST00000174567.3 |
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| CDS CAA 72 bp | TCGCACATCTCCTGTGGGCCCAGCTGGATACCCGCGTaGCGCAGGGCAATTTTCATGCTTTGCATGTCCACA | + |
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Preference number: 6 (lower is better) Translates to: SHISCGPSWIPA*RRAIFMLCMST Trigger: TGTGGACATGCAAAGCATGAAAATTGCCCTGCGCAACGCGGGTATCCAGCTGGGCCCACAGGAGATGTGCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021323.11 ENSMUST00000107026.9 ENSMUST00000172850.8 ENSMUST00000174567.3 |
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| CDS CAA 90 bp | ATGCTTTGCATGTCCACAGTGCCTGTTGGGCTGCAACTGAACAGTTaGAAGATATCCTGGAAGGCTGCCAGCTGCCGGGGTGTCAGGGGT | + |
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Preference number: 6 (lower is better) Translates to: MLCMSTVPVGLQLNS*KISWKAASCRGVRG Trigger: ACCCCTGACACCCCGGCAGCTGGCAGCCTTCCAGGATATCTTCAAACTGTTCAGTTGCAGCCCAACAGGCACTGTGGACATGCAAAGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021323.11 ENSMUST00000107026.9 ENSMUST00000172850.8 ENSMUST00000174567.3 |
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| CDS CAA 72 bp | ATGTCCACAGTGCCTGTTGGGCTGCAACTGAACAGTTaGAAGATATCCTGGAAGGCTGCCAGCTGCCGGGGT | + |
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Preference number: 6 (lower is better) Translates to: MSTVPVGLQLNS*KISWKAASCRG Trigger: ACCCCGGCAGCTGGCAGCCTTCCAGGATATCTTCAAACTGTTCAGTTGCAGCCCAACAGGCACTGTGGACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021323.11 ENSMUST00000107026.9 ENSMUST00000172850.8 ENSMUST00000174567.3 |
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| CDS CAA 90 bp | TGGGCCCAGCTGGATACCCGCGTTGCGCAGGGCAATTTTCATGCTTaGCATGTCCACAGTGCCTGTTGGGCTGCAACTGAACAGTTTGAA | + |
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Preference number: 6 (lower is better) Translates to: WAQLDTRVAQGNFHA*HVHSACWAATEQFE Trigger: TTCAAACTGTTCAGTTGCAGCCCAACAGGCACTGTGGACATGCAAAGCATGAAAATTGCCCTGCGCAACGCGGGTATCCAGCTGGGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021323.11 ENSMUST00000107026.9 ENSMUST00000172850.8 ENSMUST00000174567.3 |
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| CDS GCA 72 bp | TGGATACCCGCGTTGCGCAGGGCAATTTTCATGCTTTaGATGTCCACAGTGCCTGTTGGGCTGCAACTGAAC | + |
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Preference number: 6 (lower is better) Translates to: WIPALRRAIFML*MSTVPVGLQLN Trigger: GTTCAGTTGCAGCCCAACAGGCACTGTGGACATGCAAAGCATGAAAATTGCCCTGCGCAACGCGGGTATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021323.11 ENSMUST00000107026.9 ENSMUST00000172850.8 ENSMUST00000174567.3 |
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| CDS TCA 72 bp | ATCATCCGCCGAGCTTTGAGACCTGTCATCCGGCCCTaGCCAGTATGGCTGGTTAGCTTCAGAAGGATTCTT | + |
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Preference number: 6 (lower is better) Translates to: IIRRALRPVIRP*PVWLVSFRRIL Trigger: AAGAATCCTTCTGAAGCTAACCAGCCATACTGGTCAGGGCCGGATGACAGGTCTCAAAGCTCGGCGGATGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021323.11 ENSMUST00000107026.9 ENSMUST00000172850.8 ENSMUST00000174567.3 |
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| CDS CAA 72 bp | AGACGGTGGTTGTCAGTAAGGACACCGAGGAAGTCCTaGAAGCTCACGATCCCATCACCATCTAAGTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: RRWLSVRTPRKS*KLTIPSPSKSA Trigger: GGCTGACTTAGATGGTGATGGGATCGTGAGCTTCAAGGACTTCCTCGGTGTCCTTACTGACAACCACCGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021323.11 ENSMUST00000107026.9 ENSMUST00000172850.8 |
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| CDS CAA 90 bp | TCATCCGGCCCTGACCAGTATGGCTGGTTAGCTTCAGAAGGATTCTaGAGATCTCTCATCCTCAGTAAGGCCTCCTCTTTAGTGGTTGTG | + |
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Preference number: 6 (lower is better) Translates to: SSGPDQYGWLASEGF*RSLILSKASSLVVV Trigger: CACAACCACTAAAGAGGAGGCCTTACTGAGGATGAGAGATCTCAAGAATCCTTCTGAAGCTAACCAGCCATACTGGTCAGGGCCGGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021323.11 ENSMUST00000172850.8 ENSMUST00000174567.3 |
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| CDS CAA 72 bp | CCTGACCAGTATGGCTGGTTAGCTTCAGAAGGATTCTaGAGATCTCTCATCCTCAGTAAGGCCTCCTCTTTA | + |
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Preference number: 6 (lower is better) Translates to: PDQYGWLASEGF*RSLILSKASSL Trigger: TAAAGAGGAGGCCTTACTGAGGATGAGAGATCTCAAGAATCCTTCTGAAGCTAACCAGCCATACTGGTCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021323.11 ENSMUST00000172850.8 ENSMUST00000174567.3 |
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| CDS CCA 72 bp | GGCAATTTTCATGCTTTGCATGTCCACAGTGCCTGTTaGGCTGCAACTGAACAGTTTGAAGATATCCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: GNFHALHVHSAC*AATEQFEDILE Trigger: TTCCAGGATATCTTCAAACTGTTCAGTTGCAGCCCAACAGGCACTGTGGACATGCAAAGCATGAAAATTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021323.11 ENSMUST00000107026.9 ENSMUST00000172850.8 ENSMUST00000174567.3 |
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