Pregenerated sensors for EFCAB14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034210Ensembl transcript IDs: ENSMUST00000074425.13, ENSMUST00000106522.9, ENSMUST00000106524.4, ENSMUST00000106525.9
Found 222 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCCCTGACGGCTACAGCAACCTGCGGTTCTGTAAGGTCTTCTGCTaGAGCTGCCAGAGACGCCTAAGAGCACTGGGAGTGTCTCAACAT | + |
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Preference number: 1 (lower is better) Translates to: FPDGYSNLRFCKVFC*SCQRRLRALGVSQH Trigger: ATGTTGAGACACTCCCAGTGCTCTTAGGCGTCTCTGGCAGCTCCAGCAGAAGACCTTACAGAACCGCAGGTTGCTGTAGCCGTCAGGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| 3UTR CCA 90 bp | CAAATGTGTTCTGGCTTGAATATGAGAGAAGGGACCACATCTAGATaGTTGGTAAGCAAGCCAATGAGGTGTGTAGCAAACAAAAGCTGT | + |
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Preference number: 1 (lower is better) Translates to: QMCSGLNMREGTTSR*LVSKPMRCVANKSC Trigger: ACAGCTTTTGTTTGCTACACACCTCATTGGCTTGCTTACCAACCATCTAGATGTGGTCCCTTCTCTCATATTCAAGCCAGAACACATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| 3UTR GCA 90 bp | TCTTCTGCATTAGACCCATTCTTAAGAGCCAAGCATCCATTGCTCTaGTCCTCCTTGAATGTTACTACAGTCATATTTAAGCCAGGTACT | + |
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Preference number: 1 (lower is better) Translates to: SSALDPFLRAKHPLL*SSLNVTTVIFKPGT Trigger: AGTACCTGGCTTAAATATGACTGTAGTAACATTCAAGGAGGAGCAGAGCAATGGATGCTTGGCTCTTAAGAATGGGTCTAATGCAGAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| 3UTR GCA 90 bp | CTTCTTGACATGGAAAAACCAGAAGAAAGTCCAAGAAACAAATCCTaGTTCCTCACTGAAAAGCATATACCACAAAGAGTTAAGGTGTCT | + |
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Preference number: 1 (lower is better) Translates to: LLDMEKPEESPRNKS*FLTEKHIPQRVKVS Trigger: AGACACCTTAACTCTTTGTGGTATATGCTTTTCAGTGAGGAAGCAGGATTTGTTTCTTGGACTTTCTTCTGGTTTTTCCATGTCAAGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| 3UTR-3UTR TCA 90 bp | TCACAGTCAAAACCTTCAGCTGTGACGCTGGGACCAGGGAGGGGGCTGATGGGGGTGGCTGGTGAAGCTTaGCTAACACAAGGCACTGGA | + |
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Preference number: 2 (lower is better) Translates to: SQSKPSAVTLGPGRGLMGVAGEA*LTQGTG Trigger: TCCAGTGCCTTGTGTTAGTCAAGCTTCACCAGCCAC...CCCCATCAGCCCCCTCCCTGGTCCCAGCGTCACAGCTGAAGGTTTTGACTGTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| 3UTR-3UTR TCA 90 bp | TCACAGTCAAAACCTTCAGCTGTGACGCTGGGACCAGGGAGGGGGCTGATGGGGAGTACTCTTAGCTACTaGCTGATAAGGCCAAAGGAT | + |
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Preference number: 2 (lower is better) Translates to: SQSKPSAVTLGPGRGLMGSTLSY*LIRPKD Trigger: ATCCTTTGGCCTTATCAGTCAGTAGCTAAGAGTACT...CCCCATCAGCCCCCTCCCTGGTCCCAGCGTCACAGCTGAAGGTTTTGACTGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| 3UTR-3UTR TCA 90 bp | TCACAGTCAAAACCTTCAGCTGTGACGCTGGGACCAGGGAGGGGGCTGATGGGGATAAGGCCAAAGGATTaGAATCCAAAGCCAAACTCA | + |
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Preference number: 2 (lower is better) Translates to: SQSKPSAVTLGPGRGLMGIRPKD*NPKPNS Trigger: TGAGTTTGGCTTTGGATTTCAATCCTTTGGCCTTAT...CCCCATCAGCCCCCTCCCTGGTCCCAGCGTCACAGCTGAAGGTTTTGACTGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| 3UTR-3UTR CCA 90 bp | AGTCAGGATGAGAAACGTATAGAATGTCAGAGGGCAGTTATGGCTACCTCTGGTTGTAAGGTCTTCTGCTaGAGCTGCCAGAGACGCCTA | + |
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Preference number: 2 (lower is better) Translates to: SQDEKRIECQRAVMATSGCKVFC*SCQRRL Trigger: TAGGCGTCTCTGGCAGCTCCAGCAGAAGACCTTACA...ACCAGAGGTAGCCATAACTGCCCTCTGACATTCTATACGTTTCTCATCCTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| 3UTR-3UTR CCA 90 bp | AGCAATGGTAAAGAGCAAACTGCAATGGAAGGGAAACAAGCTGGTCGTGAAGTGATAAGAGACATCACATaGCTCAGGGGTGATGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: SNGKEQTAMEGKQAGREVIRDIT*LRGDAG Trigger: GCCAGCATCACCCCTGAGCCATGTGATGTCTCTTAT...CACTTCACGACCAGCTTGTTTCCCTTCCATTGCAGTTTGCTCTTTACCATTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| 3UTR-3UTR TCA 90 bp | TTGCTCTGCTCCTCCTTGAATGTTACTACAGTCATATTTAAGCCAGGTACTTTTTCTCCAGTGTTTCCCTaGCGGCTACAGCAACCTGCG | + |
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Preference number: 2 (lower is better) Translates to: LLCSSLNVTTVIFKPGTFSPVFP*RLQQPA Trigger: CGCAGGTTGCTGTAGCCGTCAGGGAAACACTGGAGA...AAAAGTACCTGGCTTAAATATGACTGTAGTAACATTCAAGGAGGAGCAGAGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| 3UTR CAA 90 bp | ATGTGTTCTGGCTTGAATATGAGAGAAGGGACCACATCTAGATGGTaGGTAAGCAAGCCAATGAGGTGTGTAGCAAACAAAAGCTGTCAC | + |
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Preference number: 2 (lower is better) Translates to: MCSGLNMREGTTSRW*VSKPMRCVANKSCH Trigger: GTGACAGCTTTTGTTTGCTACACACCTCATTGGCTTGCTTACCAACCATCTAGATGTGGTCCCTTCTCTCATATTCAAGCCAGAACACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| 3UTR-3UTR TCA 90 bp | TGTGAATGGTCTTTCAGTAAATATTATGGTAGATGGTACATAAAGCAAAGGACCCACATGGCTCAGGGGTaGTGCTGGCAGACAAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: CEWSFSKYYGRWYIKQRTHMAQG*CWQTSF Trigger: GAAGCTTGTCTGCCAGCATCACCCCTGAGCCATGTG...GGTCCTTTGCTTTATGTACCATCTACCATAATATTTACTGAAAGACCATTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| 3UTR CAA 90 bp | CTCAGCTCTTCTGCATTAGACCCATTCTTAAGAGCCAAGCATCCATaGCTCTGCTCCTCCTTGAATGTTACTACAGTCATATTTAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: LSSSALDPFLRAKHP*LCSSLNVTTVIFKP Trigger: TGGCTTAAATATGACTGTAGTAACATTCAAGGAGGAGCAGAGCAATGGATGCTTGGCTCTTAAGAATGGGTCTAATGCAGAAGAGCTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| 3UTR CAA 90 bp | CAATACACACTCTCTAGTCTCAGGAATACCCAAATGTGTTCTGGCTaGAATATGAGAGAAGGGACCACATCTAGATGGTTGGTAAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: QYTLSSLRNTQMCSG*NMREGTTSRWLVSK Trigger: CTTGCTTACCAACCATCTAGATGTGGTCCCTTCTCTCATATTCAAGCCAGAACACATTTGGGTATTCCTGAGACTAGAGAGTGTGTATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| 3UTR-3UTR GCA 90 bp | TGTGAATGGTCTTTCAGTAAATATTATGGTAGATGGTACATAAAGCAAAGGACCTTCTGTAAGGTCTTCTaGTGGAGCTGCCAGAGACGC | + |
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Preference number: 2 (lower is better) Translates to: CEWSFSKYYGRWYIKQRTFCKVF*WSCQRR Trigger: GCGTCTCTGGCAGCTCCAGCAGAAGACCTTACAGAA...GGTCCTTTGCTTTATGTACCATCTACCATAATATTTACTGAAAGACCATTCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| 3UTR-3UTR CCA 90 bp | AGCAATGGTAAAGAGCAAACTGCAATGGAAGGGAAACAAGCTGGTCGTGAAGTGACAAGCTTCTTGACATaGAAAAACCAGAAGAAAGTC | + |
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Preference number: 2 (lower is better) Translates to: SNGKEQTAMEGKQAGREVTSFLT*KNQKKV Trigger: GACTTTCTTCTGGTTTTTCCATGTCAAGAAGCTTGT...CACTTCACGACCAGCTTGTTTCCCTTCCATTGCAGTTTGCTCTTTACCATTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| 3UTR-3UTR TCA 90 bp | TTGCTCTGCTCCTCCTTGAATGTTACTACAGTCATATTTAAGCCAGGTACTTTTGGCAGACAAGCTTCTTaGCATGGAAAAACCAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: LLCSSLNVTTVIFKPGTFGRQAS*HGKTRR Trigger: TCTTCTGGTTTTTCCATGTCAAGAAGCTTGTCTGCC...AAAAGTACCTGGCTTAAATATGACTGTAGTAACATTCAAGGAGGAGCAGAGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| 3UTR-3UTR CCA 90 bp | ATATTTAAGCCAGGTACTTTTCTGAGACAAGATCTCACTATGGAGCCCAGACTGATGTACTACCATGACTaGCTTGTGAATGGTCTTTCA | + |
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Preference number: 2 (lower is better) Translates to: IFKPGTFLRQDLTMEPRLMYYHD*LVNGLS Trigger: TGAAAGACCATTCACAAGCCAGTCATGGTAGTACAT...CAGTCTGGGCTCCATAGTGAGATCTTGTCTCAGAAAAGTACCTGGCTTAAATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| 3UTR-3UTR TCA 90 bp | ATATTTAAGCCAGGTACTTTTCTGAGACAAGATCTCACTATGGAGCCCAGACTGTTGTCTTGCCTTCACTaGGTTTTAATGTCTAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: IFKPGTFLRQDLTMEPRLLSCLH*VLMSRE Trigger: TTCTCTAGACATTAAAACTCAGTGAAGGCAAGACAA...CAGTCTGGGCTCCATAGTGAGATCTTGTCTCAGAAAAGTACCTGGCTTAAATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| 3UTR-3UTR TCA 90 bp | GGTATGTACTACCATGACTGGCTTGTGAATGGTCTTTCAGTAAATATTATGGTAGCTGACAGGGCAACTTaGTCGAAATTAAACAGCAAT | + |
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Preference number: 2 (lower is better) Translates to: GMYYHDWLVNGLSVNIMVADRAT*SKLNSN Trigger: ATTGCTGTTTAATTTCGATCAAGTTGCCCTGTCAGC...TACCATAATATTTACTGAAAGACCATTCACAAGCCAGTCATGGTAGTACATACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| 3UTR-3UTR CCA 90 bp | TGTGAATGGTCTTTCAGTAAATATTATGGTAGATGGTACATAAAGCAAAGGACCTGTGTGTGTTTAGTATaGAAGGCAGCCAGGAGAACA | + |
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Preference number: 2 (lower is better) Translates to: CEWSFSKYYGRWYIKQRTCVCLV*KAARRT Trigger: TGTTCTCCTGGCTGCCTTCCATACTAAACACACACA...GGTCCTTTGCTTTATGTACCATCTACCATAATATTTACTGAAAGACCATTCACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| 3UTR-3UTR GCA 90 bp | TGTGAATGGTCTTTCAGTAAATATTATGGTAGATGGTACATAAAGCAAAGGACCCCAAGAAACAAATCCTaGTTCCTCACTGAAAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: CEWSFSKYYGRWYIKQRTPRNKS*FLTEKH Trigger: ATGCTTTTCAGTGAGGAAGCAGGATTTGTTTCTTGG...GGTCCTTTGCTTTATGTACCATCTACCATAATATTTACTGAAAGACCATTCACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| 3UTR GCA 72 bp | GACGGCTACAGCAACCTGCGGTTCTGTAAGGTCTTCTaGTGGAGCTGCCAGAGACGCCTAAGAGCACTGGGA | + |
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Preference number: 3 (lower is better) Translates to: DGYSNLRFCKVF*WSCQRRLRALG Trigger: TCCCAGTGCTCTTAGGCGTCTCTGGCAGCTCCAGCAGAAGACCTTACAGAACCGCAGGTTGCTGTAGCCGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| 3UTR CCA 72 bp | GGCTACAGCAACCTGCGGTTCTGTAAGGTCTTCTGCTaGAGCTGCCAGAGACGCCTAAGAGCACTGGGAGTG | + |
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Preference number: 3 (lower is better) Translates to: GYSNLRFCKVFC*SCQRRLRALGV Trigger: CACTCCCAGTGCTCTTAGGCGTCTCTGGCAGCTCCAGCAGAAGACCTTACAGAACCGCAGGTTGCTGTAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| 3UTR GCA 72 bp | AGCTTCTCCAGTGTTTCCCTGACGGCTACAGCAACCTaGGGTTCTGTAAGGTCTTCTGCTGGAGCTGCCAGA | + |
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Preference number: 3 (lower is better) Translates to: SFSSVSLTATAT*GSVRSSAGAAR Trigger: TCTGGCAGCTCCAGCAGAAGACCTTACAGAACCGCAGGTTGCTGTAGCCGTCAGGGAAACACTGGAGAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| 3UTR GCA 72 bp | ACTGGGAGTGTCTCAACATGTCAGCGAATGGTGATCTaGTCCTATCAGACCTGTCCTGGCCTGCCCACAAAG | + |
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Preference number: 3 (lower is better) Translates to: TGSVSTCQRMVI*SYQTCPGLPTK Trigger: CTTTGTGGGCAGGCCAGGACAGGTCTGATAGGAGCAGATCACCATTCGCTGACATGTTGAGACACTCCCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| 3UTR-3UTR CAA 90 bp | TCACAGTCAAAACCTTCAGCTGTGACGCTGGGACCAGGGAGGGGGCTGATGGGGACAGGAAAACTTGTCTaGCCTTCACTGAGTTTTAAT | + |
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Preference number: 3 (lower is better) Translates to: SQSKPSAVTLGPGRGLMGTGKLV*PSLSFN Trigger: ATTAAAACTCAGTGAAGGCAAGACAAGTTTTCCTGT...CCCCATCAGCCCCCTCCCTGGTCCCAGCGTCACAGCTGAAGGTTTTGACTGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| 3UTR TCA 72 bp | AAACTGCAATGGAAGGGAAACAAGCTGGTCGTGAAGTaGGACTGTCTGCCTCAGCTCTTCTGCATTAGACCC | + |
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Preference number: 3 (lower is better) Translates to: KLQWKGNKLVVK*DCLPQLFCIRP Trigger: GGGTCTAATGCAGAAGAGCTGAGGCAGACAGTCTCACTTCACGACCAGCTTGTTTCCCTTCCATTGCAGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| 3UTR-3UTR CAA 90 bp | AGCAATGGTAAAGAGCAAACTGCAATGGAAGGGAAACAAGCTGGTCGTGAAGTGAGAGCCAAGCATCCATaGCTCTGCTCCTCCTTGAAT | + |
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Preference number: 3 (lower is better) Translates to: SNGKEQTAMEGKQAGREVRAKHP*LCSSLN Trigger: ATTCAAGGAGGAGCAGAGCAATGGATGCTTGGCTCT...CACTTCACGACCAGCTTGTTTCCCTTCCATTGCAGTTTGCTCTTTACCATTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| 3UTR TCA 72 bp | GGTCAGTTTGATAAGAGACATCACATGGCTCAGGGGTaGTGCTGGCAGACAAGCTTCTTGACATGGAAAAAC | + |
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Preference number: 3 (lower is better) Translates to: GQFDKRHHMAQG*CWQTSFLTWKN Trigger: GTTTTTCCATGTCAAGAAGCTTGTCTGCCAGCATCACCCCTGAGCCATGTGATGTCTCTTATCAAACTGACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| 3UTR CCA 72 bp | TCTGGCTTGAATATGAGAGAAGGGACCACATCTAGATaGTTGGTAAGCAAGCCAATGAGGTGTGTAGCAAAC | + |
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Preference number: 3 (lower is better) Translates to: SGLNMREGTTSR*LVSKPMRCVAN Trigger: GTTTGCTACACACCTCATTGGCTTGCTTACCAACCATCTAGATGTGGTCCCTTCTCTCATATTCAAGCCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| 3UTR TCA 72 bp | ATGTTACTACAGTCATATTTAAGCCAGGTACTTTTCTaGGACAAGATCTCACTATGGAGCCCAGACTGGACT | + |
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Preference number: 3 (lower is better) Translates to: MLLQSYLSQVLF*DKISLWSPDWT Trigger: AGTCCAGTCTGGGCTCCATAGTGAGATCTTGTCTCAGAAAAGTACCTGGCTTAAATATGACTGTAGTAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| 3UTR TCA 72 bp | AAGGCACTGGATGCACAAGGTAAGACAATAAACAAATaGAGACCCAATCTTCACCGATTGATAGGTTTTTGG | + |
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Preference number: 3 (lower is better) Translates to: KALDAQGKTINK*RPNLHRLIGFW Trigger: CCAAAAACCTATCAATCGGTGAAGATTGGGTCTTCATTTGTTTATTGTCTTACCTTGTGCATCCAGTGCCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| 3UTR GCA 72 bp | TTAGACCCATTCTTAAGAGCCAAGCATCCATTGCTCTaGTCCTCCTTGAATGTTACTACAGTCATATTTAAG | + |
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Preference number: 3 (lower is better) Translates to: LDPFLRAKHPLL*SSLNVTTVIFK Trigger: CTTAAATATGACTGTAGTAACATTCAAGGAGGAGCAGAGCAATGGATGCTTGGCTCTTAAGAATGGGTCTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| CDS-3UTR GCA 90 bp | TCACAGTCAAAACCTTCAGCTGTGACGCTGGGACCAGGGAGGGGGCTGATGGGGGGCCACAACGCAGGCTaGGAGGATGACAAAGGCACA | + |
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Preference number: 4 (lower is better) Translates to: SQSKPSAVTLGPGRGLMGGHNAG*EDDKGT Trigger: TGTGCCTTTGTCATCCTCGCAGCCTGCGTTGTGGCC...CCCCATCAGCCCCCTCCCTGGTCCCAGCGTCACAGCTGAAGGTTTTGACTGTGA 60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| CDS-3UTR TCA 90 bp | GTCAGAGGGCAGTTATGGCTACCTCTGGTCAGTTTGATAAGAGACATCACATGGCGCAGGCTGCGAGGATaGCAAAGGCACAGAGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: VRGQLWLPLVSLIRDITWRRLRG*QRHRGD Trigger: GTCCCCTCTGTGCCTTTGTCATCCTCGCAGCCTGCG...CCATGTGATGTCTCTTATCAAACTGACCAGAGGTAGCCATAACTGCCCTCTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| CDS-3UTR GCA 90 bp | GTCAGAGGGCAGTTATGGCTACCTCTGGTCAGTTTGATAAGAGACATCACATGGGAAGCAGGCGGTGGCTaGCTGAGCCTTGCTTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: VRGQLWLPLVSLIRDITWEAGGG*LSLAWS Trigger: AGACCAAGCAAGGCTCAGGCAGCCACCGCCTGCTTC...CCATGTGATGTCTCTTATCAAACTGACCAGAGGTAGCCATAACTGCCCTCTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| CDS-3UTR TCA 90 bp | AGTCAGGATGAGAAACGTATAGAATGTCAGAGGGCAGTTATGGCTACCTCTGGTCAGGCGGTGGCTGCCTaGGCCTTGCTTGGTCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: SQDEKRIECQRAVMATSGQAVAA*ALLGLL Trigger: AAGAAGACCAAGCAAGGCTCAGGCAGCCACCGCCTG...ACCAGAGGTAGCCATAACTGCCCTCTGACATTCTATACGTTTCTCATCCTGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| CDS-3UTR TCA 90 bp | TCACAGTCAAAACCTTCAGCTGTGACGCTGGGACCAGGGAGGGGGCTGATGGGGTGGAATGAGCTCTTCTaGTTAGACTCCATTGTTCTA | + |
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Preference number: 4 (lower is better) Translates to: SQSKPSAVTLGPGRGLMGWNELF*LDSIVL Trigger: TAGAACAATGGAGTCTAATCAGAAGAGCTCATTCCA...CCCCATCAGCCCCCTCCCTGGTCCCAGCGTCACAGCTGAAGGTTTTGACTGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| CDS-3UTR TCA 90 bp | AGTGTCTCAACATGTCAGCGAATGGTGATCTGCTCCTATCAGACCTGTCCTGGCGGCCGATCAACGCATTaGGCTCTTTGCGCTTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: SVSTCQRMVICSYQTCPGGRSTH*ALCAFS Trigger: TGAAAAAGCGCAAAGAGCTCAATGCGTTGATCGGCC...GCCAGGACAGGTCTGATAGGAGCAGATCACCATTCGCTGACATGTTGAGACACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| CDS-3UTR TCA 90 bp | AGTGTCTCAACATGTCAGCGAATGGTGATCTGCTCCTATCAGACCTGTCCTGGCGGGCATAGTCTCCCTTaGCAAAACGAGAGCGATTTC | + |
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Preference number: 4 (lower is better) Translates to: SVSTCQRMVICSYQTCPGGHSLP*QNESDF Trigger: GAAATCGCTCTCGTTTTGTCAAGGGAGACTATGCCC...GCCAGGACAGGTCTGATAGGAGCAGATCACCATTCGCTGACATGTTGAGACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| CDS-3UTR GCA 90 bp | TGGTGGTGTATGCCTGTAATCCAGAGTTCAAGACCAGACTCAGATATACAGAGTGAAGCAGGCGGTGGCTaGCTGAGCCTTGCTTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: WWCMPVIQSSRPDSDIQSEAGGG*LSLAWS Trigger: AGACCAAGCAAGGCTCAGGCAGCCACCGCCTGCTTC...ACTCTGTATATCTGAGTCTGGTCTTGAACTCTGGATTACAGGCATACACCACCA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
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| CDS-3UTR CCA 90 bp | TCACAGTCAAAACCTTCAGCTGTGACGCTGGGACCAGGGAGGGGGCTGATGGGGTTAAAGTATTGCCAATaGAAGCCACACTCTTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: SQSKPSAVTLGPGRGLMGLKYCQ*KPHSSE Trigger: TTCAGAAGAGTGTGGCTTCCATTGGCAATACTTTAA...CCCCATCAGCCCCCTCCCTGGTCCCAGCGTCACAGCTGAAGGTTTTGACTGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| CDS-3UTR TCA 90 bp | CAGAGTTCAAGACCAGACTCAGATATACAGAGTAGTAAGGTCAACCTGGCTATACAGGCGGTGGCTGCCTaGGCCTTGCTTGGTCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: QSSRPDSDIQSSKVNLAIQAVAA*ALLGLL Trigger: AAGAAGACCAAGCAAGGCTCAGGCAGCCACCGCCTG...TATAGCCAGGTTGACCTTACTACTCTGTATATCTGAGTCTGGTCTTGAACTCTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
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| CDS-3UTR CCA 90 bp | AGTCAGGATGAGAAACGTATAGAATGTCAGAGGGCAGTTATGGCTACCTCTGGTCTTGCTCTTCATCTGTaGTCTCCGGAGGCCTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: SQDEKRIECQRAVMATSGLALHL*SPEACC Trigger: GCAACAGGCCTCCGGAGACCACAGATGAAGAGCAAG...ACCAGAGGTAGCCATAACTGCCCTCTGACATTCTATACGTTTCTCATCCTGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| CDS-3UTR TCA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTCGCAGGCTGCGAGGATaGCAAAGGCACAGAGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: VCYSSIKDWRAEELVKKVRRLRG*QRHRGD Trigger: GTCCCCTCTGTGCCTTTGTCATCCTCGCAGCCTGCG...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
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| CDS-3UTR CCA 90 bp | TGGTGGTGTATGCCTGTAATCCAGAGTTCAAGACCAGACTCAGATATACAGAGTCTTGCTCTTCATCTGTaGTCTCCGGAGGCCTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: WWCMPVIQSSRPDSDIQSLALHL*SPEACC Trigger: GCAACAGGCCTCCGGAGACCACAGATGAAGAGCAAG...ACTCTGTATATCTGAGTCTGGTCTTGAACTCTGGATTACAGGCATACACCACCA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
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| CDS-3UTR CCA 90 bp | AGCAATGGTAAAGAGCAAACTGCAATGGAAGGGAAACAAGCTGGTCGTGAAGTGTCTCTGGTCTTGGCATaGCAGAACCTAGGGAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SNGKEQTAMEGKQAGREVSLVLA*QNLGSS Trigger: GGAACTCCCTAGGTTCTGCCATGCCAAGACCAGAGA...CACTTCACGACCAGCTTGTTTCCCTTCCATTGCAGTTTGCTCTTTACCATTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| CDS-3UTR CCA 90 bp | AGCAATGGTAAAGAGCAAACTGCAATGGAAGGGAAACAAGCTGGTCGTGAAGTGTGCTCTCAAGCTCTCTaGTCTTGGCATGGCAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: SNGKEQTAMEGKQAGREVCSQAL*SWHGRT Trigger: GGTTCTGCCATGCCAAGACCAGAGAGCTTGAGAGCA...CACTTCACGACCAGCTTGTTTCCCTTCCATTGCAGTTTGCTCTTTACCATTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
||
| CDS-3UTR TCA 90 bp | TACAGAGTAGTAAGGTCAACCTGGCTATATGAGGTTGTCTCAAAACAAACAAAACGCAGGCTGCGAGGATaGCAAAGGCACAGAGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: YRVVRSTWLYEVVSKQTKRRLRG*QRHRGD Trigger: GTCCCCTCTGTGCCTTTGTCATCCTCGCAGCCTGCG...TTTTGTTTGTTTTGAGACAACCTCATATAGCCAGGTTGACCTTACTACTCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
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| CDS-3UTR GCA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTGAAGCAGGCGGTGGCTaGCTGAGCCTTGCTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VCYSSIKDWRAEELVKKVEAGGG*LSLAWS Trigger: AGACCAAGCAAGGCTCAGGCAGCCACCGCCTGCTTC...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
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| CDS-3UTR CCA 90 bp | AGTCAGGATGAGAAACGTATAGAATGTCAGAGGGCAGTTATGGCTACCTCTGGTTGCCTGAGCCTTGCTTaGTCTTCTTTCTCCGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: SQDEKRIECQRAVMATSGCLSLA*SSFSDG Trigger: ACCATCGGAGAAAGAAGACCAAGCAAGGCTCAGGCA...ACCAGAGGTAGCCATAACTGCCCTCTGACATTCTATACGTTTCTCATCCTGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| CDS-3UTR CCA 90 bp | TGGTGGTGTATGCCTGTAATCCAGAGTTCAAGACCAGACTCAGATATACAGAGTCCTCTTCGTCTGTGCTaGACTCTGAGTCTGAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: WWCMPVIQSSRPDSDIQSPLRLC*TLSLSQ Trigger: CTGACTCAGACTCAGAGTCCAGCACAGACGAAGAGG...ACTCTGTATATCTGAGTCTGGTCTTGAACTCTGGATTACAGGCATACACCACCA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
||
| CDS-3UTR TCA 90 bp | TGGTGGTGTATGCCTGTAATCCAGAGTTCAAGACCAGACTCAGATATACAGAGTGGGCATAGTCTCCCTTaGCAAAACGAGAGCGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: WWCMPVIQSSRPDSDIQSGHSLP*QNESDF Trigger: GAAATCGCTCTCGTTTTGTCAAGGGAGACTATGCCC...ACTCTGTATATCTGAGTCTGGTCTTGAACTCTGGATTACAGGCATACACCACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
||
| CDS-3UTR GCA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTGGCCACAACGCAGGCTaGGAGGATGACAAAGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: VCYSSIKDWRAEELVKKVGHNAG*EDDKGT Trigger: TGTGCCTTTGTCATCCTCGCAGCCTGCGTTGTGGCC...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
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| CDS-3UTR GCA 90 bp | GTCAGAGGGCAGTTATGGCTACCTCTGGTCAGTTTGATAAGAGACATCACATGGTTCTGCCTTGCTCAGTaGAACCACATGGCTTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: VRGQLWLPLVSLIRDITWFCLAQ*NHMAFY Trigger: ATAGAAAGCCATGTGGTTGCACTGAGCAAGGCAGAA...CCATGTGATGTCTCTTATCAAACTGACCAGAGGTAGCCATAACTGCCCTCTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
||
| CDS-3UTR CCA 90 bp | TGGTGGTGTATGCCTGTAATCCAGAGTTCAAGACCAGACTCAGATATACAGAGTTGCCTGAGCCTTGCTTaGTCTTCTTTCTCCGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: WWCMPVIQSSRPDSDIQSCLSLA*SSFSDG Trigger: ACCATCGGAGAAAGAAGACCAAGCAAGGCTCAGGCA...ACTCTGTATATCTGAGTCTGGTCTTGAACTCTGGATTACAGGCATACACCACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
||
| CDS-3UTR TCA 90 bp | GTCAGAGGGCAGTTATGGCTACCTCTGGTCAGTTTGATAAGAGACATCACATGGATCCCATCCACATCTTaGCCAGTCTTGTGGAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: VRGQLWLPLVSLIRDITWIPSTS*PVLWNK Trigger: TTTATTCCACAAGACTGGTCAAGATGTGGATGGGAT...CCATGTGATGTCTCTTATCAAACTGACCAGAGGTAGCCATAACTGCCCTCTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
||
| CDS-3UTR GCA 90 bp | TACAGAGTAGTAAGGTCAACCTGGCTATATGAGGTTGTCTCAAAACAAACAAAAGGCCACAACGCAGGCTaGGAGGATGACAAAGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: YRVVRSTWLYEVVSKQTKGHNAG*EDDKGT Trigger: TGTGCCTTTGTCATCCTCGCAGCCTGCGTTGTGGCC...TTTTGTTTGTTTTGAGACAACCTCATATAGCCAGGTTGACCTTACTACTCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
||
| CDS-3UTR GCA 90 bp | GTCAGAGGGCAGTTATGGCTACCTCTGGTCAGTTTGATAAGAGACATCACATGGTCCATTCGAATCAAATaGTCTCAAGCTCTCTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VRGQLWLPLVSLIRDITWSIRIK*SQALWS Trigger: AGACCAGAGAGCTTGAGAGCATTTGATTCGAATGGA...CCATGTGATGTCTCTTATCAAACTGACCAGAGGTAGCCATAACTGCCCTCTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
||
| CDS-3UTR CCA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTCTTGCTCTTCATCTGTaGTCTCCGGAGGCCTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VCYSSIKDWRAEELVKKVLALHL*SPEACC Trigger: GCAACAGGCCTCCGGAGACCACAGATGAAGAGCAAG...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
||
| CDS-3UTR CCA 90 bp | ATATTTAAGCCAGGTACTTTTCTGAGACAAGATCTCACTATGGAGCCCAGACTGCACGCCTGCTCCATGTaGTATCCTCTGGACAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: IFKPGTFLRQDLTMEPRLHACSM*YPLDRK Trigger: TTTTCTGTCCAGAGGATACCACATGGAGCAGGCGTG...CAGTCTGGGCTCCATAGTGAGATCTTGTCTCAGAAAAGTACCTGGCTTAAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
||
| CDS-3UTR TCA 90 bp | CAGAGTTCAAGACCAGACTCAGATATACAGAGTAGTAAGGTCAACCTGGCTATAGAAGCCACACTCTTCTaGAGTCCTTCTACAGTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: QSSRPDSDIQSSKVNLAIEATLF*SPSTVL Trigger: TAGCACTGTAGAAGGACTTCAGAAGAGTGTGGCTTC...TATAGCCAGGTTGACCTTACTACTCTGTATATCTGAGTCTGGTCTTGAACTCTG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
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| CDS-3UTR GCA 90 bp | GGTATGTACTACCATGACTGGCTTGTGAATGGTCTTTCAGTAAATATTATGGTAGGGGACAGCAGATCTTaGAGCATCGGGCATAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GMYYHDWLVNGLSVNIMVGDSRS*SIGHSL Trigger: GAGACTATGCCCGATGCTGCAAGATCTGCTGTCCCC...TACCATAATATTTACTGAAAGACCATTCACAAGCCAGTCATGGTAGTACATACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
||
| CDS-3UTR GCA 90 bp | TACAGAGTAGTAAGGTCAACCTGGCTATATGAGGTTGTCTCAAAACAAACAAAAGGGGACAGCAGATCTTaGAGCATCGGGCATAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: YRVVRSTWLYEVVSKQTKGDSRS*SIGHSL Trigger: GAGACTATGCCCGATGCTGCAAGATCTGCTGTCCCC...TTTTGTTTGTTTTGAGACAACCTCATATAGCCAGGTTGACCTTACTACTCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
||
| CDS-3UTR GCA 90 bp | TGGTGGTGTATGCCTGTAATCCAGAGTTCAAGACCAGACTCAGATATACAGAGTTCCTCTAAGGAGTTGTaGAGGTACAGGATATCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WWCMPVIQSSRPDSDIQSSSKEL*RYRISC Trigger: ACAGGATATCCTGTACCTGCACAACTCCTTAGAGGA...ACTCTGTATATCTGAGTCTGGTCTTGAACTCTGGATTACAGGCATACACCACCA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
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| CDS-3UTR GCA 90 bp | ATATTTAAGCCAGGTACTTTTCTGAGACAAGATCTCACTATGGAGCCCAGACTGGTTTGTTCTCTGTTCTaGCTTGCTCAGTGCAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: IFKPGTFLRQDLTMEPRLVCSLF*LAQCNH Trigger: GTGGTTGCACTGAGCAAGGCAGAACAGAGAACAAAC...CAGTCTGGGCTCCATAGTGAGATCTTGTCTCAGAAAAGTACCTGGCTTAAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
||
| CDS-3UTR GCA 90 bp | TACAGAGTAGTAAGGTCAACCTGGCTATATGAGGTTGTCTCAAAACAAACAAAACAGGTAGTTCACAACTaGCTGCAGCTCCAGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YRVVRSTWLYEVVSKQTKQVVHN*LQLQLQ Trigger: CTGGAGCTGGAGCTGCAGGCAGTTGTGAACTACCTG...TTTTGTTTGTTTTGAGACAACCTCATATAGCCAGGTTGACCTTACTACTCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
||
| CDS-3UTR GCA 90 bp | TACAGAGTAGTAAGGTCAACCTGGCTATATGAGGTTGTCTCAAAACAAACAAAATTGTACTCCTCCCCCTaGGGACCAGAGTTCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: YRVVRSTWLYEVVSKQTKLYSSP*GPEFSS Trigger: GGAACTGAACTCTGGTCCGCAGGGGGAGGAGTACAA...TTTTGTTTGTTTTGAGACAACCTCATATAGCCAGGTTGACCTTACTACTCTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
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| CDS-3UTR CCA 90 bp | ATATTTAAGCCAGGTACTTTTCTGAGACAAGATCTCACTATGGAGCCCAGACTGGGTGATGGCAAGATCTaGTTGCTTCCATTGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IFKPGTFLRQDLTMEPRLGDGKI*LLPLFS Trigger: GGAGAACAATGGAAGCAACCAGATCTTGCCATCACC...CAGTCTGGGCTCCATAGTGAGATCTTGTCTCAGAAAAGTACCTGGCTTAAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| CDS-3UTR CCA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTTCTCTGGTCTTGGCATaGCAGAACCTAGGGAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VCYSSIKDWRAEELVKKVSLVLA*QNLGSS Trigger: GGAACTCCCTAGGTTCTGCCATGCCAAGACCAGAGA...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
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| CDS-3UTR CCA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTTGCTCTCAAGCTCTCTaGTCTTGGCATGGCAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: VCYSSIKDWRAEELVKKVCSQAL*SWHGRT Trigger: GGTTCTGCCATGCCAAGACCAGAGAGCTTGAGAGCA...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
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| 3UTR CAA 72 bp | CTCTCTAGTCTCAGGAATACCCAAATGTGTTCTGGCTaGAATATGAGAGAAGGGACCACATCTAGATGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSSLRNTQMCSG*NMREGTTSRWL Trigger: CAACCATCTAGATGTGGTCCCTTCTCTCATATTCAAGCCAGAACACATTTGGGTATTCCTGAGACTAGAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| CDS-3UTR TCA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTGGCCGATCAACGCATTaGGCTCTTTGCGCTTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VCYSSIKDWRAEELVKKVGRSTH*ALCAFS Trigger: TGAAAAAGCGCAAAGAGCTCAATGCGTTGATCGGCC...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
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| CDS-3UTR TCA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTGGGCATAGTCTCCCTTaGCAAAACGAGAGCGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: VCYSSIKDWRAEELVKKVGHSLP*QNESDF Trigger: GAAATCGCTCTCGTTTTGTCAAGGGAGACTATGCCC...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
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| CDS-3UTR TCA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTGGCTTTCTATCAGGCTaGGTCTCTGTGTCAGGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: VCYSSIKDWRAEELVKKVGFLSG*VSVSGY Trigger: GTAACCTGACACAGAGACTCAGCCTGATAGAAAGCC...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
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| CDS-3UTR GCA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTTTCTCTGTTCTGCCTTaGTCAGTGCAACCACATGGC | + |
|
Preference number: 4 (lower is better) Translates to: VCYSSIKDWRAEELVKKVFSVLP*SVQPHG Trigger: GCCATGTGGTTGCACTGAGCAAGGCAGAACAGAGAA...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
||
| CDS-3UTR CCA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTTGCCTGAGCCTTGCTTaGTCTTCTTTCTCCGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: VCYSSIKDWRAEELVKKVCLSLA*SSFSDG Trigger: ACCATCGGAGAAAGAAGACCAAGCAAGGCTCAGGCA...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
||
| CDS-3UTR CCA 90 bp | GGTATGTACTACCATGACTGGCTTGTGAATGGTCTTTCAGTAAATATTATGGTACCTCTTCGTCTGTGCTaGACTCTGAGTCTGAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GMYYHDWLVNGLSVNIMVPLRLC*TLSLSQ Trigger: CTGACTCAGACTCAGAGTCCAGCACAGACGAAGAGG...TACCATAATATTTACTGAAAGACCATTCACAAGCCAGTCATGGTAGTACATACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| CDS-3UTR CCA 90 bp | AGCAATGGTAAAGAGCAAACTGCAATGGAAGGGAAACAAGCTGGTCGTGAAGTGACCTCTACAGCAAGGTaGACACTGTTTAAAGTATTG | + |
|
Preference number: 4 (lower is better) Translates to: SNGKEQTAMEGKQAGREVTSTAR*TLFKVL Trigger: CAATACTTTAAACAGTGTCCACCTTGCTGTAGAGGT...CACTTCACGACCAGCTTGTTTCCCTTCCATTGCAGTTTGCTCTTTACCATTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
||
| CDS-3UTR TCA 90 bp | TACAGAGTAGTAAGGTCAACCTGGCTATATGAGGTTGTCTCAAAACAAACAAAAGGCCGATCAACGCATTaGGCTCTTTGCGCTTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YRVVRSTWLYEVVSKQTKGRSTH*ALCAFS Trigger: TGAAAAAGCGCAAAGAGCTCAATGCGTTGATCGGCC...TTTTGTTTGTTTTGAGACAACCTCATATAGCCAGGTTGACCTTACTACTCTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
||
| CDS-3UTR TCA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTGAAGCCACACTCTTCTaGAGTCCTTCTACAGTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: VCYSSIKDWRAEELVKKVEATLF*SPSTVL Trigger: TAGCACTGTAGAAGGACTTCAGAAGAGTGTGGCTTC...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
||
| CDS-3UTR TCA 90 bp | TACAGAGTAGTAAGGTCAACCTGGCTATATGAGGTTGTCTCAAAACAAACAAAAGGCTTTCTATCAGGCTaGGTCTCTGTGTCAGGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: YRVVRSTWLYEVVSKQTKGFLSG*VSVSGY Trigger: GTAACCTGACACAGAGACTCAGCCTGATAGAAAGCC...TTTTGTTTGTTTTGAGACAACCTCATATAGCCAGGTTGACCTTACTACTCTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
||
| CDS-3UTR GCA 90 bp | CAGAGTTCAAGACCAGACTCAGATATACAGAGTAGTAAGGTCAACCTGGCTATAATGGCAAGATCTGGTTaGTTCCATTGTTCTCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: QSSRPDSDIQSSKVNLAIMARSG*FHCSPY Trigger: GTATGGAGAACAATGGAAGCAACCAGATCTTGCCAT...TATAGCCAGGTTGACCTTACTACTCTGTATATCTGAGTCTGGTCTTGAACTCTG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
||
| CDS-3UTR GCA 90 bp | TGGTGGTGTATGCCTGTAATCCAGAGTTCAAGACCAGACTCAGATATACAGAGTCAGGATATCCTGTTTTaGACTTTCACTGTGGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: WWCMPVIQSSRPDSDIQSQDILF*TFTVGF Trigger: AAATCCCACAGTGAAAGTGCAAAACAGGATATCCTG...ACTCTGTATATCTGAGTCTGGTCTTGAACTCTGGATTACAGGCATACACCACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
||
| CDS-3UTR GCA 90 bp | GGTATGTACTACCATGACTGGCTTGTGAATGGTCTTTCAGTAAATATTATGGTATTCTCTGTTCTGCCTTaGTCAGTGCAACCACATGGC | + |
|
Preference number: 4 (lower is better) Translates to: GMYYHDWLVNGLSVNIMVFSVLP*SVQPHG Trigger: GCCATGTGGTTGCACTGAGCAAGGCAGAACAGAGAA...TACCATAATATTTACTGAAAGACCATTCACAAGCCAGTCATGGTAGTACATACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
||
| CDS-3UTR GCA 90 bp | TACAGAGTAGTAAGGTCAACCTGGCTATATGAGGTTGTCTCAAAACAAACAAAATTCTCTGTTCTGCCTTaGTCAGTGCAACCACATGGC | + |
|
Preference number: 4 (lower is better) Translates to: YRVVRSTWLYEVVSKQTKFSVLP*SVQPHG Trigger: GCCATGTGGTTGCACTGAGCAAGGCAGAACAGAGAA...TTTTGTTTGTTTTGAGACAACCTCATATAGCCAGGTTGACCTTACTACTCTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
||
| CDS-3UTR GCA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTGTTTGTTCTCTGTTCTaGCTTGCTCAGTGCAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: VCYSSIKDWRAEELVKKVVCSLF*LAQCNH Trigger: GTGGTTGCACTGAGCAAGGCAGAACAGAGAACAAAC...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
||
| CDS-3UTR CCA 90 bp | TGGTGGTGTATGCCTGTAATCCAGAGTTCAAGACCAGACTCAGATATACAGAGTACCTCTACAGCAAGGTaGACACTGTTTAAAGTATTG | + |
|
Preference number: 4 (lower is better) Translates to: WWCMPVIQSSRPDSDIQSTSTAR*TLFKVL Trigger: CAATACTTTAAACAGTGTCCACCTTGCTGTAGAGGT...ACTCTGTATATCTGAGTCTGGTCTTGAACTCTGGATTACAGGCATACACCACCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
||
| CDS-3UTR CCA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTGGTGATGGCAAGATCTaGTTGCTTCCATTGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VCYSSIKDWRAEELVKKVGDGKI*LLPLFS Trigger: GGAGAACAATGGAAGCAACCAGATCTTGCCATCACC...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
||
| CDS-3UTR CCA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTCTCAGTGCAACCACATaGCTTTCTATCAGGCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VCYSSIKDWRAEELVKKVLSATT*LSIRLS Trigger: ACTCAGCCTGATAGAAAGCCATGTGGTTGCACTGAG...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
||
| 3UTR CAA 72 bp | TTCTTAAGAGCCAAGCATCCATTGCTCTGCTCCTCCTaGAATGTTACTACAGTCATATTTAAGCCAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: FLRAKHPLLCSS*NVTTVIFKPGT Trigger: AGTACCTGGCTTAAATATGACTGTAGTAACATTCAAGGAGGAGCAGAGCAATGGATGCTTGGCTCTTAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
||
| CDS-3UTR TCA 90 bp | CAGAGTTCAAGACCAGACTCAGATATACAGAGTAGTAAGGTCAACCTGGCTATATGGAATGAGCTCTTCTaGTTAGACTCCATTGTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: QSSRPDSDIQSSKVNLAIWNELF*LDSIVL Trigger: TAGAACAATGGAGTCTAATCAGAAGAGCTCATTCCA...TATAGCCAGGTTGACCTTACTACTCTGTATATCTGAGTCTGGTCTTGAACTCTG 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
||
| CDS-3UTR TCA 90 bp | GGTATGTACTACCATGACTGGCTTGTGAATGGTCTTTCAGTAAATATTATGGTAGAAGCCACACTCTTCTaGAGTCCTTCTACAGTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: GMYYHDWLVNGLSVNIMVEATLF*SPSTVL Trigger: TAGCACTGTAGAAGGACTTCAGAAGAGTGTGGCTTC...TACCATAATATTTACTGAAAGACCATTCACAAGCCAGTCATGGTAGTACATACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
||
| CDS-3UTR TCA 90 bp | TGTGAATGGTCTTTCAGTAAATATTATGGTAGATGGTACATAAAGCAAAGGACCGGCTTTCTATCAGGCTaGGTCTCTGTGTCAGGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: CEWSFSKYYGRWYIKQRTGFLSG*VSVSGY Trigger: GTAACCTGACACAGAGACTCAGCCTGATAGAAAGCC...GGTCCTTTGCTTTATGTACCATCTACCATAATATTTACTGAAAGACCATTCACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
||
| CDS-3UTR TCA 90 bp | CAGAGTTCAAGACCAGACTCAGATATACAGAGTAGTAAGGTCAACCTGGCTATACGAAGCTCGGATACCTaGGAATTTGAATTATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QSSRPDSDIQSSKVNLAIRSSDT*EFELSS Trigger: AGAAGATAATTCAAATTCTCAGGTATCCGAGCTTCG...TATAGCCAGGTTGACCTTACTACTCTGTATATCTGAGTCTGGTCTTGAACTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
||
| CDS-3UTR TCA 90 bp | TACAGAGTAGTAAGGTCAACCTGGCTATATGAGGTTGTCTCAAAACAAACAAAAAGCTCCAGAAGGATCTaGTGTTTCTGGCCTTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: YRVVRSTWLYEVVSKQTKSSRRI*CFWPLM Trigger: CATCAAAGGCCAGAAACATCAGATCCTTCTGGAGCT...TTTTGTTTGTTTTGAGACAACCTCATATAGCCAGGTTGACCTTACTACTCTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
||
| CDS-3UTR GCA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTTCCTCTAAGGAGTTGTaGAGGTACAGGATATCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VCYSSIKDWRAEELVKKVSSKEL*RYRISC Trigger: ACAGGATATCCTGTACCTGCACAACTCCTTAGAGGA...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
||
| CDS-3UTR GCA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTTTCTGCCTTGCTCAGTaGAACCACATGGCTTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: VCYSSIKDWRAEELVKKVFCLAQ*NHMAFY Trigger: ATAGAAAGCCATGTGGTTGCACTGAGCAAGGCAGAA...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
||
| CDS-3UTR GCA 90 bp | TACAGAGTAGTAAGGTCAACCTGGCTATATGAGGTTGTCTCAAAACAAACAAAAGTTTGTTCTCTGTTCTaGCTTGCTCAGTGCAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: YRVVRSTWLYEVVSKQTKVCSLF*LAQCNH Trigger: GTGGTTGCACTGAGCAAGGCAGAACAGAGAACAAAC...TTTTGTTTGTTTTGAGACAACCTCATATAGCCAGGTTGACCTTACTACTCTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
||
| CDS-3UTR CCA 90 bp | TACAGAGTAGTAAGGTCAACCTGGCTATATGAGGTTGTCTCAAAACAAACAAAAGGTGATGGCAAGATCTaGTTGCTTCCATTGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YRVVRSTWLYEVVSKQTKGDGKI*LLPLFS Trigger: GGAGAACAATGGAAGCAACCAGATCTTGCCATCACC...TTTTGTTTGTTTTGAGACAACCTCATATAGCCAGGTTGACCTTACTACTCTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
||
| CDS-3UTR CCA 90 bp | TGGTGGTGTATGCCTGTAATCCAGAGTTCAAGACCAGACTCAGATATACAGAGTTTTGCACTTTCACTGTaGGATTTATTGTCAAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: WWCMPVIQSSRPDSDIQSFALSL*DLLSSS Trigger: AGAGCTTGACAATAAATCCCACAGTGAAAGTGCAAA...ACTCTGTATATCTGAGTCTGGTCTTGAACTCTGGATTACAGGCATACACCACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
||
| CDS-3UTR CCA 90 bp | GGTATGTACTACCATGACTGGCTTGTGAATGGTCTTTCAGTAAATATTATGGTACTCAGTGCAACCACATaGCTTTCTATCAGGCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GMYYHDWLVNGLSVNIMVLSATT*LSIRLS Trigger: ACTCAGCCTGATAGAAAGCCATGTGGTTGCACTGAG...TACCATAATATTTACTGAAAGACCATTCACAAGCCAGTCATGGTAGTACATACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
||
| CDS-3UTR CCA 90 bp | TACAGAGTAGTAAGGTCAACCTGGCTATATGAGGTTGTCTCAAAACAAACAAAACTCAGTGCAACCACATaGCTTTCTATCAGGCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: YRVVRSTWLYEVVSKQTKLSATT*LSIRLS Trigger: ACTCAGCCTGATAGAAAGCCATGTGGTTGCACTGAG...TTTTGTTTGTTTTGAGACAACCTCATATAGCCAGGTTGACCTTACTACTCTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
||
| CDS-3UTR CCA 90 bp | TGGTGGTGTATGCCTGTAATCCAGAGTTCAAGACCAGACTCAGATATACAGAGTACTTGGGTCTCAATTTaGTTTCTAAGAAGCTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: WWCMPVIQSSRPDSDIQSTWVSI*FLRSCE Trigger: TTCACAGCTTCTTAGAAACCAAATTGAGACCCAAGT...ACTCTGTATATCTGAGTCTGGTCTTGAACTCTGGATTACAGGCATACACCACCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
||
| CDS-3UTR TCA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTATCCCATCCACATCTTaGCCAGTCTTGTGGAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: VCYSSIKDWRAEELVKKVIPSTS*PVLWNK Trigger: TTTATTCCACAAGACTGGTCAAGATGTGGATGGGAT...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
||
| CDS-3UTR GCA 90 bp | TTGCTCTGCTCCTCCTTGAATGTTACTACAGTCATATTTAAGCCAGGTACTTTTATGGCAAGATCTGGTTaGTTCCATTGTTCTCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: LLCSSLNVTTVIFKPGTFMARSG*FHCSPY Trigger: GTATGGAGAACAATGGAAGCAACCAGATCTTGCCAT...AAAAGTACCTGGCTTAAATATGACTGTAGTAACATTCAAGGAGGAGCAGAGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
||
| CDS-3UTR GCA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTATGGCAAGATCTGGTTaGTTCCATTGTTCTCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: VCYSSIKDWRAEELVKKVMARSG*FHCSPY Trigger: GTATGGAGAACAATGGAAGCAACCAGATCTTGCCAT...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
||
| CDS-3UTR GCA 90 bp | TACAGAGTAGTAAGGTCAACCTGGCTATATGAGGTTGTCTCAAAACAAACAAAATTCTGCCTTGCTCAGTaGAACCACATGGCTTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: YRVVRSTWLYEVVSKQTKFCLAQ*NHMAFY Trigger: ATAGAAAGCCATGTGGTTGCACTGAGCAAGGCAGAA...TTTTGTTTGTTTTGAGACAACCTCATATAGCCAGGTTGACCTTACTACTCTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
||
| CDS-3UTR GCA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTTCCATTCGAATCAAATaGTCTCAAGCTCTCTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VCYSSIKDWRAEELVKKVSIRIK*SQALWS Trigger: AGACCAGAGAGCTTGAGAGCATTTGATTCGAATGGA...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
||
| CDS-3UTR TCA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTTGGAATGAGCTCTTCTaGTTAGACTCCATTGTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: VCYSSIKDWRAEELVKKVWNELF*LDSIVL Trigger: TAGAACAATGGAGTCTAATCAGAAGAGCTCATTCCA...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
||
| CDS-3UTR TCA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTCGAAGCTCGGATACCTaGGAATTTGAATTATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VCYSSIKDWRAEELVKKVRSSDT*EFELSS Trigger: AGAAGATAATTCAAATTCTCAGGTATCCGAGCTTCG...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
||
| CDS-3UTR GCA 90 bp | TGCTCCTCCTTGAATGTTACTACAGTCATATTTAAGCCAGGTACTTTTCTGAGACACTGTTTAAAGTATTaGCAATGGAAGCCACACTCT | + |
|
Preference number: 4 (lower is better) Translates to: CSSLNVTTVIFKPGTFLRHCLKY*QWKPHS Trigger: AGAGTGTGGCTTCCATTGGCAATACTTTAAACAGTG...TCTCAGAAAAGTACCTGGCTTAAATATGACTGTAGTAACATTCAAGGAGGAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
||
| CDS-3UTR GCA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTCACTGTTTAAAGTATTaGCAATGGAAGCCACACTCT | + |
|
Preference number: 4 (lower is better) Translates to: VCYSSIKDWRAEELVKKVHCLKY*QWKPHS Trigger: AGAGTGTGGCTTCCATTGGCAATACTTTAAACAGTG...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
||
| CDS-3UTR GCA 90 bp | TGCTCCTCCTTGAATGTTACTACAGTCATATTTAAGCCAGGTACTTTTCTGAGACAGGATATCCTGTTTTaGACTTTCACTGTGGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: CSSLNVTTVIFKPGTFLRQDILF*TFTVGF Trigger: AAATCCCACAGTGAAAGTGCAAAACAGGATATCCTG...TCTCAGAAAAGTACCTGGCTTAAATATGACTGTAGTAACATTCAAGGAGGAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
||
| CDS-3UTR GCA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTCAGGATATCCTGTTTTaGACTTTCACTGTGGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: VCYSSIKDWRAEELVKKVQDILF*TFTVGF Trigger: AAATCCCACAGTGAAAGTGCAAAACAGGATATCCTG...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
||
| CDS-3UTR GCA 90 bp | TGTGAATGGTCTTTCAGTAAATATTATGGTAGATGGTACATAAAGCAAAGGACCTCCTCTAAGGAGTTGTaGAGGTACAGGATATCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CEWSFSKYYGRWYIKQRTSSKEL*RYRISC Trigger: ACAGGATATCCTGTACCTGCACAACTCCTTAGAGGA...GGTCCTTTGCTTTATGTACCATCTACCATAATATTTACTGAAAGACCATTCACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
||
| CDS-3UTR CCA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTACCTCTACAGCAAGGTaGACACTGTTTAAAGTATTG | + |
|
Preference number: 4 (lower is better) Translates to: VCYSSIKDWRAEELVKKVTSTAR*TLFKVL Trigger: CAATACTTTAAACAGTGTCCACCTTGCTGTAGAGGT...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
||
| CDS-3UTR GCA 90 bp | TACAGAGTAGTAAGGTCAACCTGGCTATATGAGGTTGTCTCAAAACAAACAAAACACTGTTTAAAGTATTaGCAATGGAAGCCACACTCT | + |
|
Preference number: 4 (lower is better) Translates to: YRVVRSTWLYEVVSKQTKHCLKY*QWKPHS Trigger: AGAGTGTGGCTTCCATTGGCAATACTTTAAACAGTG...TTTTGTTTGTTTTGAGACAACCTCATATAGCCAGGTTGACCTTACTACTCTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
||
| CDS-3UTR CCA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTTTAAAGTATTGCCAATaGAAGCCACACTCTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VCYSSIKDWRAEELVKKVLKYCQ*KPHSSE Trigger: TTCAGAAGAGTGTGGCTTCCATTGGCAATACTTTAA...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
||
| CDS-3UTR CCA 90 bp | TTGCTCTGCTCCTCCTTGAATGTTACTACAGTCATATTTAAGCCAGGTACTTTTTTTGCACTTTCACTGTaGGATTTATTGTCAAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLCSSLNVTTVIFKPGTFFALSL*DLLSSS Trigger: AGAGCTTGACAATAAATCCCACAGTGAAAGTGCAAA...AAAAGTACCTGGCTTAAATATGACTGTAGTAACATTCAAGGAGGAGCAGAGCAA 38% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
||
| CDS-3UTR CCA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTTTTGCACTTTCACTGTaGGATTTATTGTCAAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VCYSSIKDWRAEELVKKVFALSL*DLLSSS Trigger: AGAGCTTGACAATAAATCCCACAGTGAAAGTGCAAA...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
||
| CDS-3UTR CCA 90 bp | TTGCTCTGCTCCTCCTTGAATGTTACTACAGTCATATTTAAGCCAGGTACTTTTACTTGGGTCTCAATTTaGTTTCTAAGAAGCTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLCSSLNVTTVIFKPGTFTWVSI*FLRSCE Trigger: TTCACAGCTTCTTAGAAACCAAATTGAGACCCAAGT...AAAAGTACCTGGCTTAAATATGACTGTAGTAACATTCAAGGAGGAGCAGAGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
||
| CDS-3UTR CCA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTACTTGGGTCTCAATTTaGTTTCTAAGAAGCTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VCYSSIKDWRAEELVKKVTWVSI*FLRSCE Trigger: TTCACAGCTTCTTAGAAACCAAATTGAGACCCAAGT...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
||
| CDS-3UTR TCA 90 bp | TGTGAATGGTCTTTCAGTAAATATTATGGTAGATGGTACATAAAGCAAAGGACCCGAAGCTCGGATACCTaGGAATTTGAATTATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CEWSFSKYYGRWYIKQRTRSSDT*EFELSS Trigger: AGAAGATAATTCAAATTCTCAGGTATCCGAGCTTCG...GGTCCTTTGCTTTATGTACCATCTACCATAATATTTACTGAAAGACCATTCACA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
||
| CDS-3UTR CCA 90 bp | TACAGAGTAGTAAGGTCAACCTGGCTATATGAGGTTGTCTCAAAACAAACAAAATTAAAGTATTGCCAATaGAAGCCACACTCTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: YRVVRSTWLYEVVSKQTKLKYCQ*KPHSSE Trigger: TTCAGAAGAGTGTGGCTTCCATTGGCAATACTTTAA...TTTTGTTTGTTTTGAGACAACCTCATATAGCCAGGTTGACCTTACTACTCTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
||
| CDS-3UTR CAA 90 bp | TCACAGTCAAAACCTTCAGCTGTGACGCTGGGACCAGGGAGGGGGCTGATGGGGGGAGAGAGGTTTTACTaGGGTCTCAATTTGGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SQSKPSAVTLGPGRGLMGGERFY*GLNLVS Trigger: AGAAACCAAATTGAGACCCAAGTAAAACCTCTCTCC...CCCCATCAGCCCCCTCCCTGGTCCCAGCGTCACAGCTGAAGGTTTTGACTGTGA 53% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
||
| CDS GCA 90 bp | CCATTGTTCTCCATACTGCCCTGCAGTAACCCCAAGGTTGTCCTGTaGTCATCCACAGTCTTCTGTATCACCTCTACAGCAAGGTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: PLFSILPCSNPKVVL*SSTVFCITSTARWT Trigger: TGTCCACCTTGCTGTAGAGGTGATACAGAAGACTGTGGATGAGCACAGGACAACCTTGGGGTTACTGCAGGGCAGTATGGAGAACAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106524.4 ENSMUST00000106525.9 |
||
| CDS GCA 90 bp | GGTGATGGCAAGATCTGGTTGCTTCCATTGTTCTCCATACTGCCCTaGAGTAACCCCAAGGTTGTCCTGTGCTCATCCACAGTCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GDGKIWLLPLFSILP*SNPKVVLCSSTVFC Trigger: ACAGAAGACTGTGGATGAGCACAGGACAACCTTGGGGTTACTGCAGGGCAGTATGGAGAACAATGGAAGCAACCAGATCTTGCCATCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106524.4 ENSMUST00000106525.9 |
||
| CDS GCA 90 bp | CATCGTGCTGGAGCTCACGTTTGTTCTCTGTTCTGCCTTGCTCAGTaGAACCACATGGCTTTCTATCAGGCTGAGTCTCTGTGTCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: HRAGAHVCSLFCLAQ*NHMAFYQAESLCQV Trigger: AACCTGACACAGAGACTCAGCCTGATAGAAAGCCATGTGGTTGCACTGAGCAAGGCAGAACAGAGAACAAACGTGAGCTCCAGCACGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106525.9 |
||
| CDS GCA 90 bp | AGCCCTATTCTCCATCGTGCTGGAGCTCACGTTTGTTCTCTGTTCTaGCTTGCTCAGTGCAACCACATGGCTTTCTATCAGGCTGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SPILHRAGAHVCSLF*LAQCNHMAFYQAES Trigger: AGACTCAGCCTGATAGAAAGCCATGTGGTTGCACTGAGCAAGGCAGAACAGAGAACAAACGTGAGCTCCAGCACGATGGAGAATAGGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106525.9 |
||
| CDS CCA 90 bp | GAGCTCACGTTTGTTCTCTGTTCTGCCTTGCTCAGTGCAACCACATaGCTTTCTATCAGGCTGAGTCTCTGTGTCAGGTTACTGAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ELTFVLCSALLSATT*LSIRLSLCVRLLRV Trigger: GACCCTCAGTAACCTGACACAGAGACTCAGCCTGATAGAAAGCCATGTGGTTGCACTGAGCAAGGCAGAACAGAGAACAAACGTGAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106525.9 |
||
| CDS CCA 90 bp | CCAAAGACTCTCTTTTCAGAGTGGCAGCCCTATTCTCCATCGTGCTaGAGCTCACGTTTGTTCTCTGTTCTGCCTTGCTCAGTGCAACCA | + |
|
Preference number: 5 (lower is better) Translates to: PKTLFSEWQPYSPSC*SSRLFSVLPCSVQP Trigger: TGGTTGCACTGAGCAAGGCAGAACAGAGAACAAACGTGAGCTCCAGCACGATGGAGAATAGGGCTGCCACTCTGAAAAGAGAGTCTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106525.9 |
||
| CDS CCA 90 bp | CATCTCCATTCGAATCAAATGCTCTCAAGCTCTCTGGTCTTGGCATaGCAGAACCTAGGGAGTTCCAGAGTTCCTGGTAGGTCAGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: HLHSNQMLSSSLVLA*QNLGSSRVPGRSAS Trigger: GGATGCTGACCTACCAGGAACTCTGGAACTCCCTAGGTTCTGCCATGCCAAGACCAGAGAGCTTGAGAGCATTTGATTCGAATGGAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074425.13 ENSMUST00000106524.4 ENSMUST00000106525.9 |
||
| CDS GCA 90 bp | TCACCAAAGACTCTCTTTTCAGAGTGGCAGCCCTATTCTCCATCGTaGTGGAGCTCACGTTTGTTCTCTGTTCTGCCTTGCTCAGTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: SPKTLFSEWQPYSPS*WSSRLFSVLPCSVQ Trigger: TTGCACTGAGCAAGGCAGAACAGAGAACAAACGTGAGCTCCAGCACGATGGAGAATAGGGCTGCCACTCTGAAAAGAGAGTCTTTGGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106525.9 |
||
| CDS GCA 90 bp | TATTGTCAAGCTCTGATGGAGGTGAAGGTGATGGCAAGATCTGGTTaGTTCCATTGTTCTCCATACTGCCCTGCAGTAACCCCAAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: YCQALMEVKVMARSG*FHCSPYCPAVTPRL Trigger: CAACCTTGGGGTTACTGCAGGGCAGTATGGAGAACAATGGAAGCAACCAGATCTTGCCATCACCTTCACCTCCATCAGAGCTTGACAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106524.4 ENSMUST00000106525.9 |
||
| CDS CCA 90 bp | GTACAGTGTCACTTCTGTTGGTCACCAAAGACTCTCTTTTCAGAGTaGCAGCCCTATTCTCCATCGTGCTGGAGCTCACGTTTGTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VQCHFCWSPKTLFSE*QPYSPSCWSSRLFS Trigger: AGAGAACAAACGTGAGCTCCAGCACGATGGAGAATAGGGCTGCCACTCTGAAAAGAGAGTCTTTGGTGACCAACAGAAGTGACACTGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106525.9 |
||
| CDS-3UTR CAA 90 bp | AGTGTCTCAACATGTCAGCGAATGGTGATCTGCTCCTATCAGACCTGTCCTGGCGTCTCGCTCATTCCCTaGAGTTTAAGGTCATTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SVSTCQRMVICSYQTCPGVSLIP*SLRSFC Trigger: ACAGAATGACCTTAAACTCAAGGGAATGAGCGAGAC...GCCAGGACAGGTCTGATAGGAGCAGATCACCATTCGCTGACATGTTGAGACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
||
| CDS-3UTR CAA 90 bp | AGCAATGGTAAAGAGCAAACTGCAATGGAAGGGAAACAAGCTGGTCGTGAAGTGAGGCCGATCAACGCATaGAGCTCTTTGCGCTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SNGKEQTAMEGKQAGREVRPINA*SSLRFF Trigger: GAAAAAGCGCAAAGAGCTCAATGCGTTGATCGGCCT...CACTTCACGACCAGCTTGTTTCCCTTCCATTGCAGTTTGCTCTTTACCATTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
||
| CDS-3UTR CAA 90 bp | CAGAGTTCAAGACCAGACTCAGATATACAGAGTAGTAAGGTCAACCTGGCTATACTGCCTGAGCCTTGCTaGGTCTTCTTTCTCCGATGG | + |
|
Preference number: 5 (lower is better) Translates to: QSSRPDSDIQSSKVNLAILPEPC*VFFLRW Trigger: CCATCGGAGAAAGAAGACCAAGCAAGGCTCAGGCAG...TATAGCCAGGTTGACCTTACTACTCTGTATATCTGAGTCTGGTCTTGAACTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
||
| CDS-3UTR CAA 90 bp | GTCAGAGGGCAGTTATGGCTACCTCTGGTCAGTTTGATAAGAGACATCACATGGACTTCCTCTAAGGAGTaGTGCAGGTACAGGATATCC | + |
|
Preference number: 5 (lower is better) Translates to: VRGQLWLPLVSLIRDITWTSSKE*CRYRIS Trigger: GGATATCCTGTACCTGCACAACTCCTTAGAGGAAGT...CCATGTGATGTCTCTTATCAAACTGACCAGAGGTAGCCATAACTGCCCTCTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
||
| CDS CCA 90 bp | CTGAGGGTCTCGCTCATTCCCTTGAGTTTAAGGTCATTCTGTCTCTaGTATTCCACTACAGTACTGTTGACTTCCTCTAAGGAGTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LRVSLIPLSLRSFCL*YSTTVLLTSSKELC Trigger: GCACAACTCCTTAGAGGAAGTCAACAGTACTGTAGTGGAATACCAGAGACAGAATGACCTTAAACTCAAGGGAATGAGCGAGACCCTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106525.9 |
||
| CDS-3UTR CAA 90 bp | ATATTTAAGCCAGGTACTTTTCTGAGACAAGATCTCACTATGGAGCCCAGACTGGTTCTCTGTTCTGCCTaGCTCAGTGCAACCACATGG | + |
|
Preference number: 5 (lower is better) Translates to: IFKPGTFLRQDLTMEPRLVLCSA*LSATTW Trigger: CCATGTGGTTGCACTGAGCAAGGCAGAACAGAGAAC...CAGTCTGGGCTCCATAGTGAGATCTTGTCTCAGAAAAGTACCTGGCTTAAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
||
| CDS-3UTR CAA 90 bp | CAGAGTTCAAGACCAGACTCAGATATACAGAGTAGTAAGGTCAACCTGGCTATAGTTCTCTGTTCTGCCTaGCTCAGTGCAACCACATGG | + |
|
Preference number: 5 (lower is better) Translates to: QSSRPDSDIQSSKVNLAIVLCSA*LSATTW Trigger: CCATGTGGTTGCACTGAGCAAGGCAGAACAGAGAAC...TATAGCCAGGTTGACCTTACTACTCTGTATATCTGAGTCTGGTCTTGAACTCTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
||
| CDS CCA 90 bp | TATCTTCTTTCTTCATGCTTTGCGCCTGTACAGTGTCACTTCTGTTaGTCACCAAAGACTCTCTTTTCAGAGTGGCAGCCCTATTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: YLLSSCFAPVQCHFC*SPKTLFSEWQPYSP Trigger: TGGAGAATAGGGCTGCCACTCTGAAAAGAGAGTCTTTGGTGACCAACAGAAGTGACACTGTACAGGCGCAAAGCATGAAGAAAGAAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106524.4 ENSMUST00000106525.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGTTCAAGACCAGACTCAGATATACAGAGTAGTAAGGTCAACCTGGCTATAAGGCCGATCAACGCATaGAGCTCTTTGCGCTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: QSSRPDSDIQSSKVNLAIRPINA*SSLRFF Trigger: GAAAAAGCGCAAAGAGCTCAATGCGTTGATCGGCCT...TATAGCCAGGTTGACCTTACTACTCTGTATATCTGAGTCTGGTCTTGAACTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
||
| CDS-3UTR CAA 90 bp | TGCTCCTCCTTGAATGTTACTACAGTCATATTTAAGCCAGGTACTTTTCTGAGACTGCCTGAGCCTTGCTaGGTCTTCTTTCTCCGATGG | + |
|
Preference number: 5 (lower is better) Translates to: CSSLNVTTVIFKPGTFLRLPEPC*VFFLRW Trigger: CCATCGGAGAAAGAAGACCAAGCAAGGCTCAGGCAG...TCTCAGAAAAGTACCTGGCTTAAATATGACTGTAGTAACATTCAAGGAGGAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
||
| CDS-3UTR CAA 90 bp | AGTCAGGATGAGAAACGTATAGAATGTCAGAGGGCAGTTATGGCTACCTCTGGTGATGGCAAGATCTGGTaGCTTCCATTGTTCTCCATA | + |
|
Preference number: 5 (lower is better) Translates to: SQDEKRIECQRAVMATSGDGKIW*LPLFSI Trigger: TATGGAGAACAATGGAAGCAACCAGATCTTGCCATC...ACCAGAGGTAGCCATAACTGCCCTCTGACATTCTATACGTTTCTCATCCTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
||
| CDS-3UTR CAA 90 bp | AGCAATGGTAAAGAGCAAACTGCAATGGAAGGGAAACAAGCTGGTCGTGAAGTGTCACTGTGGGATTTATaGTCAAGCTCTGATGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SNGKEQTAMEGKQAGREVSLWDL*SSSDGG Trigger: ACCTCCATCAGAGCTTGACAATAAATCCCACAGTGA...CACTTCACGACCAGCTTGTTTCCCTTCCATTGCAGTTTGCTCTTTACCATTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
||
| CDS-3UTR CAA 90 bp | AGCAATGGTAAAGAGCAAACTGCAATGGAAGGGAAACAAGCTGGTCGTGAAGTGTCCACTACAGTACTGTaGACTTCCTCTAAGGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SNGKEQTAMEGKQAGREVSTTVL*TSSKEL Trigger: CAACTCCTTAGAGGAAGTCAACAGTACTGTAGTGGA...CACTTCACGACCAGCTTGTTTCCCTTCCATTGCAGTTTGCTCTTTACCATTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
||
| CDS-3UTR CAA 90 bp | AGCAATGGTAAAGAGCAAACTGCAATGGAAGGGAAACAAGCTGGTCGTGAAGTGCTGTTGCTTTCAGGTTaGTTTGTGAGAGCACTGATC | + |
|
Preference number: 5 (lower is better) Translates to: SNGKEQTAMEGKQAGREVLLLSG*FVRALI Trigger: GATCAGTGCTCTCACAAACAAACCTGAAAGCAACAG...CACTTCACGACCAGCTTGTTTCCCTTCCATTGCAGTTTGCTCTTTACCATTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
||
| CDS-3UTR CAA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTTCAAGCTCTCTGGTCTaGGCATGGCAGAACCTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: VCYSSIKDWRAEELVKKVSSSLV*AWQNLG Trigger: CCCTAGGTTCTGCCATGCCAAGACCAGAGAGCTTGA...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
||
| CDS CCA 90 bp | GGCAGACTAAGTAAGTCTGCGGCTGACTTGACGCTGGCTTTTAGGTaGTTTACTGCAGAACTCAAGAGAGAAATCTGCTTATTCATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GRLSKSAADLTLAFR*FTAELKREICLFIS Trigger: AGAAATGAATAAGCAGATTTCTCTCTTGAGTTCTGCAGTAAACCACCTAAAAGCCAGCGTCAAGTCAGCCGCAGACTTACTTAGTCTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106524.4 ENSMUST00000106525.9 |
||
| CDS-3UTR CAA 90 bp | AGTCAGGATGAGAAACGTATAGAATGTCAGAGGGCAGTTATGGCTACCTCTGGTAGTTCCTCATTAAGTTaGGGGATTTCCTGGAATGAG | + |
|
Preference number: 5 (lower is better) Translates to: SQDEKRIECQRAVMATSGSSSLS*GISWNE Trigger: CTCATTCCAGGAAATCCCCAAACTTAATGAGGAACT...ACCAGAGGTAGCCATAACTGCCCTCTGACATTCTATACGTTTCTCATCCTGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
||
| CDS-3UTR CAA 90 bp | CAGAGTTCAAGACCAGACTCAGATATACAGAGTAGTAAGGTCAACCTGGCTATAACTTCCTCTAAGGAGTaGTGCAGGTACAGGATATCC | + |
|
Preference number: 5 (lower is better) Translates to: QSSRPDSDIQSSKVNLAITSSKE*CRYRIS Trigger: GGATATCCTGTACCTGCACAACTCCTTAGAGGAAGT...TATAGCCAGGTTGACCTTACTACTCTGTATATCTGAGTCTGGTCTTGAACTCTG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
||
| CDS-3UTR CAA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTGTTCTCTGTTCTGCCTaGCTCAGTGCAACCACATGG | + |
|
Preference number: 5 (lower is better) Translates to: VCYSSIKDWRAEELVKKVVLCSA*LSATTW Trigger: CCATGTGGTTGCACTGAGCAAGGCAGAACAGAGAAC...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
||
| CDS-3UTR CAA 90 bp | TGGTGGTGTATGCCTGTAATCCAGAGTTCAAGACCAGACTCAGATATACAGAGTTGTGAAGTTCTGTACTaGCTCTTCATCTGTGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: WWCMPVIQSSRPDSDIQSCEVLY*LFICGL Trigger: GAGACCACAGATGAAGAGCAAGTACAGAACTTCACA...ACTCTGTATATCTGAGTCTGGTCTTGAACTCTGGATTACAGGCATACACCACCA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
||
| CDS GCA 90 bp | CTCTGGTATTCCACTACAGTACTGTTGACTTCCTCTAAGGAGTTGTaGAGGTACAGGATATCCTGTTTTGCACTTTCACTGTGGGATTTA | + |
|
Preference number: 5 (lower is better) Translates to: LWYSTTVLLTSSKEL*RYRISCFALSLWDL Trigger: TAAATCCCACAGTGAAAGTGCAAAACAGGATATCCTGTACCTGCACAACTCCTTAGAGGAAGTCAACAGTACTGTAGTGGAATACCAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106525.9 |
||
| CDS GCA 90 bp | CTCGAAGCTCGGATACCTGAGAATTTGAATTATCTTCTTTCTTCATaGTTTGCGCCTGTACAGTGTCACTTCTGTTGGTCACCAAAGACT | + |
|
Preference number: 5 (lower is better) Translates to: LEARIPENLNYLLSS*FAPVQCHFCWSPKT Trigger: AGTCTTTGGTGACCAACAGAAGTGACACTGTACAGGCGCAAAGCATGAAGAAAGAAGATAATTCAAATTCTCAGGTATCCGAGCTTCGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106524.4 ENSMUST00000106525.9 |
||
| CDS-3UTR CAA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTAGGCCGATCAACGCATaGAGCTCTTTGCGCTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VCYSSIKDWRAEELVKKVRPINA*SSLRFF Trigger: GAAAAAGCGCAAAGAGCTCAATGCGTTGATCGGCCT...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
||
| CDS-3UTR CAA 90 bp | TGCTCCTCCTTGAATGTTACTACAGTCATATTTAAGCCAGGTACTTTTCTGAGAATCTGGTTGCTTCCATaGTTCTCCATACTGCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CSSLNVTTVIFKPGTFLRIWLLP*FSILPC Trigger: GCAGGGCAGTATGGAGAACAATGGAAGCAACCAGAT...TCTCAGAAAAGTACCTGGCTTAAATATGACTGTAGTAACATTCAAGGAGGAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
||
| CDS-3UTR CAA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTATCTGGTTGCTTCCATaGTTCTCCATACTGCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VCYSSIKDWRAEELVKKVIWLLP*FSILPC Trigger: GCAGGGCAGTATGGAGAACAATGGAAGCAACCAGAT...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGTTCAAGACCAGACTCAGATATACAGAGTAGTAAGGTCAACCTGGCTATAGATGGCAAGATCTGGTaGCTTCCATTGTTCTCCATA | + |
|
Preference number: 5 (lower is better) Translates to: QSSRPDSDIQSSKVNLAIDGKIW*LPLFSI Trigger: TATGGAGAACAATGGAAGCAACCAGATCTTGCCATC...TATAGCCAGGTTGACCTTACTACTCTGTATATCTGAGTCTGGTCTTGAACTCTG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGTTCAAGACCAGACTCAGATATACAGAGTAGTAAGGTCAACCTGGCTATATCACTGTGGGATTTATaGTCAAGCTCTGATGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: QSSRPDSDIQSSKVNLAISLWDL*SSSDGG Trigger: ACCTCCATCAGAGCTTGACAATAAATCCCACAGTGA...TATAGCCAGGTTGACCTTACTACTCTGTATATCTGAGTCTGGTCTTGAACTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGTTCAAGACCAGACTCAGATATACAGAGTAGTAAGGTCAACCTGGCTATATCCACTACAGTACTGTaGACTTCCTCTAAGGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: QSSRPDSDIQSSKVNLAISTTVL*TSSKEL Trigger: CAACTCCTTAGAGGAAGTCAACAGTACTGTAGTGGA...TATAGCCAGGTTGACCTTACTACTCTGTATATCTGAGTCTGGTCTTGAACTCTG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGTTCAAGACCAGACTCAGATATACAGAGTAGTAAGGTCAACCTGGCTATAGTCTCGCTCATTCCCTaGAGTTTAAGGTCATTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: QSSRPDSDIQSSKVNLAIVSLIP*SLRSFC Trigger: ACAGAATGACCTTAAACTCAAGGGAATGAGCGAGAC...TATAGCCAGGTTGACCTTACTACTCTGTATATCTGAGTCTGGTCTTGAACTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGTTCAAGACCAGACTCAGATATACAGAGTAGTAAGGTCAACCTGGCTATAACAGTGTCACTTCTGTaGGTCACCAAAGACTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: QSSRPDSDIQSSKVNLAITVSLL*VTKDSL Trigger: AAGAGAGTCTTTGGTGACCAACAGAAGTGACACTGT...TATAGCCAGGTTGACCTTACTACTCTGTATATCTGAGTCTGGTCTTGAACTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGTTCAAGACCAGACTCAGATATACAGAGTAGTAAGGTCAACCTGGCTATACTGTTGCTTTCAGGTTaGTTTGTGAGAGCACTGATC | + |
|
Preference number: 5 (lower is better) Translates to: QSSRPDSDIQSSKVNLAILLLSG*FVRALI Trigger: GATCAGTGCTCTCACAAACAAACCTGAAAGCAACAG...TATAGCCAGGTTGACCTTACTACTCTGTATATCTGAGTCTGGTCTTGAACTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
||
| CDS-3UTR CAA 90 bp | TGGTGGTGTATGCCTGTAATCCAGAGTTCAAGACCAGACTCAGATATACAGAGTGGAGAGAGGTTTTACTaGGGTCTCAATTTGGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: WWCMPVIQSSRPDSDIQSGERFY*GLNLVS Trigger: AGAAACCAAATTGAGACCCAAGTAAAACCTCTCTCC...ACTCTGTATATCTGAGTCTGGTCTTGAACTCTGGATTACAGGCATACACCACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
||
| CDS-3UTR CAA 90 bp | TGTGAATGGTCTTTCAGTAAATATTATGGTAGATGGTACATAAAGCAAAGGACCTCAAGCTCTCTGGTCTaGGCATGGCAGAACCTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: CEWSFSKYYGRWYIKQRTSSSLV*AWQNLG Trigger: CCCTAGGTTCTGCCATGCCAAGACCAGAGAGCTTGA...GGTCCTTTGCTTTATGTACCATCTACCATAATATTTACTGAAAGACCATTCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
||
| CDS TCA 90 bp | ACTGATCAGCTGCAGTTTTTCTCGAAGCTCGGATACCTGAGAATTTaGATTATCTTCTTTCTTCATGCTTTGCGCCTGTACAGTGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: TDQLQFFSKLGYLRI*IIFFLHALRLYSVT Trigger: AGTGACACTGTACAGGCGCAAAGCATGAAGAAAGAAGATAATTCAAATTCTCAGGTATCCGAGCTTCGAGAAAAACTGCAGCTGATCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106524.4 ENSMUST00000106525.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGTTCAAGACCAGACTCAGATATACAGAGTAGTAAGGTCAACCTGGCTATAAGTTCCTCATTAAGTTaGGGGATTTCCTGGAATGAG | + |
|
Preference number: 5 (lower is better) Translates to: QSSRPDSDIQSSKVNLAISSSLS*GISWNE Trigger: CTCATTCCAGGAAATCCCCAAACTTAATGAGGAACT...TATAGCCAGGTTGACCTTACTACTCTGTATATCTGAGTCTGGTCTTGAACTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
||
| CDS-3UTR CAA 90 bp | TACAGAGTAGTAAGGTCAACCTGGCTATATGAGGTTGTCTCAAAACAAACAAAAATCTGGTTGCTTCCATaGTTCTCCATACTGCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: YRVVRSTWLYEVVSKQTKIWLLP*FSILPC Trigger: GCAGGGCAGTATGGAGAACAATGGAAGCAACCAGAT...TTTTGTTTGTTTTGAGACAACCTCATATAGCCAGGTTGACCTTACTACTCTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
||
| CDS-3UTR CAA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTACTTCCTCTAAGGAGTaGTGCAGGTACAGGATATCC | + |
|
Preference number: 5 (lower is better) Translates to: VCYSSIKDWRAEELVKKVTSSKE*CRYRIS Trigger: GGATATCCTGTACCTGCACAACTCCTTAGAGGAAGT...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGTTCAAGACCAGACTCAGATATACAGAGTAGTAAGGTCAACCTGGCTATATTCATTTCTGTGATGTaGATCCAGACTCTGCTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: QSSRPDSDIQSSKVNLAIFISVM*IQTLLK Trigger: CTTAAGCAGAGTCTGGATCAACATCACAGAAATGAA...TATAGCCAGGTTGACCTTACTACTCTGTATATCTGAGTCTGGTCTTGAACTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106522.9 |
||
| CDS-3UTR CAA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTGATGGCAAGATCTGGTaGCTTCCATTGTTCTCCATA | + |
|
Preference number: 5 (lower is better) Translates to: VCYSSIKDWRAEELVKKVDGKIW*LPLFSI Trigger: TATGGAGAACAATGGAAGCAACCAGATCTTGCCATC...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
||
| CDS-3UTR CAA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTTCACTGTGGGATTTATaGTCAAGCTCTGATGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: VCYSSIKDWRAEELVKKVSLWDL*SSSDGG Trigger: ACCTCCATCAGAGCTTGACAATAAATCCCACAGTGA...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
||
| CDS-3UTR CAA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTTCCACTACAGTACTGTaGACTTCCTCTAAGGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: VCYSSIKDWRAEELVKKVSTTVL*TSSKEL Trigger: CAACTCCTTAGAGGAAGTCAACAGTACTGTAGTGGA...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
||
| CDS-3UTR CAA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTGTCTCGCTCATTCCCTaGAGTTTAAGGTCATTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VCYSSIKDWRAEELVKKVVSLIP*SLRSFC Trigger: ACAGAATGACCTTAAACTCAAGGGAATGAGCGAGAC...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
||
| CDS-3UTR CAA 90 bp | TGCTCCTCCTTGAATGTTACTACAGTCATATTTAAGCCAGGTACTTTTCTGAGAACAGTGTCACTTCTGTaGGTCACCAAAGACTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: CSSLNVTTVIFKPGTFLRTVSLL*VTKDSL Trigger: AAGAGAGTCTTTGGTGACCAACAGAAGTGACACTGT...TCTCAGAAAAGTACCTGGCTTAAATATGACTGTAGTAACATTCAAGGAGGAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
||
| CDS-3UTR CAA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTACAGTGTCACTTCTGTaGGTCACCAAAGACTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VCYSSIKDWRAEELVKKVTVSLL*VTKDSL Trigger: AAGAGAGTCTTTGGTGACCAACAGAAGTGACACTGT...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
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| CDS-3UTR CAA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTCTGTTGCTTTCAGGTTaGTTTGTGAGAGCACTGATC | + |
|
Preference number: 5 (lower is better) Translates to: VCYSSIKDWRAEELVKKVLLLSG*FVRALI Trigger: GATCAGTGCTCTCACAAACAAACCTGAAAGCAACAG...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
||
| CDS-3UTR CAA 90 bp | TGCTCCTCCTTGAATGTTACTACAGTCATATTTAAGCCAGGTACTTTTCTGAGATGTGAAGTTCTGTACTaGCTCTTCATCTGTGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: CSSLNVTTVIFKPGTFLRCEVLY*LFICGL Trigger: GAGACCACAGATGAAGAGCAAGTACAGAACTTCACA...TCTCAGAAAAGTACCTGGCTTAAATATGACTGTAGTAACATTCAAGGAGGAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
||
| CDS-3UTR CAA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTTGTGAAGTTCTGTACTaGCTCTTCATCTGTGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: VCYSSIKDWRAEELVKKVCEVLY*LFICGL Trigger: GAGACCACAGATGAAGAGCAAGTACAGAACTTCACA...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
||
| CDS TCA 90 bp | TCCATGTGGTATCCTCTGGACAGAAAACCCATAGCTCCTTTTGAGTaGACAATTAGGAAGAAAGAATATGATTTCCTGTTTCATCAGACC | + |
|
Preference number: 5 (lower is better) Translates to: SMWYPLDRKPIAPFE*TIRKKEYDFLFHQT Trigger: GGTCTGATGAAACAGGAAATCATATTCTTTCTTCCTAATTGTTCACTCAAAAGGAGCTATGGGTTTTCTGTCCAGAGGATACCACATGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
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| CDS-3UTR CAA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTAGTTCCTCATTAAGTTaGGGGATTTCCTGGAATGAG | + |
|
Preference number: 5 (lower is better) Translates to: VCYSSIKDWRAEELVKKVSSSLS*GISWNE Trigger: CTCATTCCAGGAAATCCCCAAACTTAATGAGGAACT...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
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| CDS-3UTR CAA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTGGAGAGAGGTTTTACTaGGGTCTCAATTTGGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VCYSSIKDWRAEELVKKVGERFY*GLNLVS Trigger: AGAAACCAAATTGAGACCCAAGTAAAACCTCTCTCC...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
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| CDS-3UTR CAA 90 bp | TTGCTCTGCTCCTCCTTGAATGTTACTACAGTCATATTTAAGCCAGGTACTTTTTTCATTTCTGTGATGTaGATCCAGACTCTGCTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: LLCSSLNVTTVIFKPGTFFISVM*IQTLLK Trigger: CTTAAGCAGAGTCTGGATCAACATCACAGAAATGAA...AAAAGTACCTGGCTTAAATATGACTGTAGTAACATTCAAGGAGGAGCAGAGCAA 39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000074425.13 |
||
| CDS-3UTR CAA 90 bp | GTTTGTTATAGTAGTATAAAGGACTGGAGGGCTGAAGAGTTAGTCAAGAAGGTTTTCATTTCTGTGATGTaGATCCAGACTCTGCTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: VCYSSIKDWRAEELVKKVFISVM*IQTLLK Trigger: CTTAAGCAGAGTCTGGATCAACATCACAGAAATGAA...AACCTTCTTGACTAACTCTTCAGCCCTCCAGTCCTTTATACTACTATAACAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106525.9 |
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| CDS CAA 90 bp | AGCTCTGATGGAGGTGAAGGTGATGGCAAGATCTGGTTGCTTCCATaGTTCTCCATACTGCCCTGCAGTAACCCCAAGGTTGTCCTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSDGGEGDGKIWLLP*FSILPCSNPKVVLC Trigger: GCACAGGACAACCTTGGGGTTACTGCAGGGCAGTATGGAGAACAATGGAAGCAACCAGATCTTGCCATCACCTTCACCTCCATCAGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106524.4 ENSMUST00000106525.9 |
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| CDS GCA 72 bp | TCCATACTGCCCTGCAGTAACCCCAAGGTTGTCCTGTaGTCATCCACAGTCTTCTGTATCACCTCTACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SILPCSNPKVVL*SSTVFCITSTA Trigger: TGCTGTAGAGGTGATACAGAAGACTGTGGATGAGCACAGGACAACCTTGGGGTTACTGCAGGGCAGTATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106524.4 ENSMUST00000106525.9 |
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| CDS GCA 72 bp | GCTCTGATGGAGGTGAAGGTGATGGCAAGATCTGGTTaGTTCCATTGTTCTCCATACTGCCCTGCAGTAACC | + |
|
Preference number: 6 (lower is better) Translates to: ALMEVKVMARSG*FHCSPYCPAVT Trigger: GGTTACTGCAGGGCAGTATGGAGAACAATGGAAGCAACCAGATCTTGCCATCACCTTCACCTCCATCAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106524.4 ENSMUST00000106525.9 |
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| CDS GCA 72 bp | CTCCATCGTGCTGGAGCTCACGTTTGTTCTCTGTTCTaGCTTGCTCAGTGCAACCACATGGCTTTCTATCAG | + |
|
Preference number: 6 (lower is better) Translates to: LHRAGAHVCSLF*LAQCNHMAFYQ Trigger: CTGATAGAAAGCCATGTGGTTGCACTGAGCAAGGCAGAACAGAGAACAAACGTGAGCTCCAGCACGATGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106525.9 |
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| CDS GCA 72 bp | ACTCTCTTTTCAGAGTGGCAGCCCTATTCTCCATCGTaGTGGAGCTCACGTTTGTTCTCTGTTCTGCCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: TLFSEWQPYSPS*WSSRLFSVLPC Trigger: GCAAGGCAGAACAGAGAACAAACGTGAGCTCCAGCACGATGGAGAATAGGGCTGCCACTCTGAAAAGAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106525.9 |
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| CDS CCA 72 bp | TCGAATCAAATGCTCTCAAGCTCTCTGGTCTTGGCATaGCAGAACCTAGGGAGTTCCAGAGTTCCTGGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: SNQMLSSSLVLA*QNLGSSRVPGR Trigger: CCTACCAGGAACTCTGGAACTCCCTAGGTTCTGCCATGCCAAGACCAGAGAGCTTGAGAGCATTTGATTCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074425.13 ENSMUST00000106524.4 ENSMUST00000106525.9 |
||
| CDS CAA 72 bp | GGAGGTGAAGGTGATGGCAAGATCTGGTTGCTTCCATaGTTCTCCATACTGCCCTGCAGTAACCCCAAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: GGEGDGKIWLLP*FSILPCSNPKV Trigger: AACCTTGGGGTTACTGCAGGGCAGTATGGAGAACAATGGAAGCAACCAGATCTTGCCATCACCTTCACCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106524.4 ENSMUST00000106525.9 |
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| CDS CAA 72 bp | TTTCTCCGATGGTCACCAGCCAGGCCGATCAACGCATaGAGCTCTTTGCGCTTTTTCATCTTTTTGTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: FLRWSPARPINA*SSLRFFIFLWG Trigger: CCCCCACAAAAAGATGAAAAAGCGCAAAGAGCTCAATGCGTTGATCGGCCTGGCTGGTGACCATCGGAGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000106524.4 |
||
| CDS CAA 90 bp | GGTTGCTTCCATTGTTCTCCATACTGCCCTGCAGTAACCCCAAGGTaGTCCTGTGCTCATCCACAGTCTTCTGTATCACCTCTACAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: GCFHCSPYCPAVTPR*SCAHPQSSVSPLQQ Trigger: TTGCTGTAGAGGTGATACAGAAGACTGTGGATGAGCACAGGACAACCTTGGGGTTACTGCAGGGCAGTATGGAGAACAATGGAAGCAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106524.4 ENSMUST00000106525.9 |
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| CDS GCA 72 bp | AAGATCTGGTTGCTTCCATTGTTCTCCATACTGCCCTaGAGTAACCCCAAGGTTGTCCTGTGCTCATCCACA | + |
|
Preference number: 6 (lower is better) Translates to: KIWLLPLFSILP*SNPKVVLCSST Trigger: TGTGGATGAGCACAGGACAACCTTGGGGTTACTGCAGGGCAGTATGGAGAACAATGGAAGCAACCAGATCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106524.4 ENSMUST00000106525.9 |
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| CDS CCA 72 bp | TCTTCATGCTTTGCGCCTGTACAGTGTCACTTCTGTTaGTCACCAAAGACTCTCTTTTCAGAGTGGCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SSCFAPVQCHFC*SPKTLFSEWQP Trigger: GGGCTGCCACTCTGAAAAGAGAGTCTTTGGTGACCAACAGAAGTGACACTGTACAGGCGCAAAGCATGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106524.4 ENSMUST00000106525.9 |
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| CDS CAA 72 bp | AGCTCTGATGGAGGTGAAGGTGATGGCAAGATCTGGTaGCTTCCATTGTTCTCCATACTGCCCTGCAGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: SSDGGEGDGKIW*LPLFSILPCSN Trigger: GTTACTGCAGGGCAGTATGGAGAACAATGGAAGCAACCAGATCTTGCCATCACCTTCACCTCCATCAGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106524.4 ENSMUST00000106525.9 |
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| CDS CAA 72 bp | CTCCATTCGAATCAAATGCTCTCAAGCTCTCTGGTCTaGGCATGGCAGAACCTAGGGAGTTCCAGAGTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LHSNQMLSSSLV*AWQNLGSSRVP Trigger: AGGAACTCTGGAACTCCCTAGGTTCTGCCATGCCAAGACCAGAGAGCTTGAGAGCATTTGATTCGAATGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074425.13 ENSMUST00000106524.4 ENSMUST00000106525.9 |
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| CDS CAA 90 bp | ATCTTCCATCTCCATTCGAATCAAATGCTCTCAAGCTCTCTGGTCTaGGCATGGCAGAACCTAGGGAGTTCCAGAGTTCCTGGTAGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: IFHLHSNQMLSSSLV*AWQNLGSSRVPGRS Trigger: TGACCTACCAGGAACTCTGGAACTCCCTAGGTTCTGCCATGCCAAGACCAGAGAGCTTGAGAGCATTTGATTCGAATGGAGATGGAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074425.13 ENSMUST00000106524.4 ENSMUST00000106525.9 |
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| CDS CAA 72 bp | TTCTTCATGCTTTGCGCCTGTACAGTGTCACTTCTGTaGGTCACCAAAGACTCTCTTTTCAGAGTGGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: FFMLCACTVSLL*VTKDSLFRVAA Trigger: GGCTGCCACTCTGAAAAGAGAGTCTTTGGTGACCAACAGAAGTGACACTGTACAGGCGCAAAGCATGAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106524.4 ENSMUST00000106525.9 |
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| CDS CAA 90 bp | AGGCTGAGTCTCTGTGTCAGGTTACTGAGGGTCTCGCTCATTCCCTaGAGTTTAAGGTCATTCTGTCTCTGGTATTCCACTACAGTACTG | + |
|
Preference number: 6 (lower is better) Translates to: RLSLCVRLLRVSLIP*SLRSFCLWYSTTVL Trigger: CAGTACTGTAGTGGAATACCAGAGACAGAATGACCTTAAACTCAAGGGAATGAGCGAGACCCTCAGTAACCTGACACAGAGACTCAGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106525.9 |
||
| CDS GCA 72 bp | CAGGAAAGAGTATCTTCCATCTCCATTCGAATCAAATaGTCTCAAGCTCTCTGGTCTTGGCATGGCAGAACC | + |
|
Preference number: 6 (lower is better) Translates to: QERVSSISIRIK*SQALWSWHGRT Trigger: GGTTCTGCCATGCCAAGACCAGAGAGCTTGAGAGCATTTGATTCGAATGGAGATGGAAGATACTCTTTCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074425.13 ENSMUST00000106524.4 ENSMUST00000106525.9 |
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| CDS CCA 72 bp | TTTGTTCTCTGTTCTGCCTTGCTCAGTGCAACCACATaGCTTTCTATCAGGCTGAGTCTCTGTGTCAGGTTA | + |
|
Preference number: 6 (lower is better) Translates to: FVLCSALLSATT*LSIRLSLCVRL Trigger: TAACCTGACACAGAGACTCAGCCTGATAGAAAGCCATGTGGTTGCACTGAGCAAGGCAGAACAGAGAACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106525.9 |
||
| CDS CAA 72 bp | CTCTGTGTCAGGTTACTGAGGGTCTCGCTCATTCCCTaGAGTTTAAGGTCATTCTGTCTCTGGTATTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: LCVRLLRVSLIP*SLRSFCLWYST Trigger: AGTGGAATACCAGAGACAGAATGACCTTAAACTCAAGGGAATGAGCGAGACCCTCAGTAACCTGACACAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106525.9 |
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| CDS CAA 90 bp | TGCAGGTACAGGATATCCTGTTTTGCACTTTCACTGTGGGATTTATaGTCAAGCTCTGATGGAGGTGAAGGTGATGGCAAGATCTGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: CRYRISCFALSLWDL*SSSDGGEGDGKIWL Trigger: CAACCAGATCTTGCCATCACCTTCACCTCCATCAGAGCTTGACAATAAATCCCACAGTGAAAGTGCAAAACAGGATATCCTGTACCTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106525.9 |
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| CDS CAA 90 bp | TTATCTTCTTTCTTCATGCTTTGCGCCTGTACAGTGTCACTTCTGTaGGTCACCAAAGACTCTCTTTTCAGAGTGGCAGCCCTATTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LSSFFMLCACTVSLL*VTKDSLFRVAALFS Trigger: GGAGAATAGGGCTGCCACTCTGAAAAGAGAGTCTTTGGTGACCAACAGAAGTGACACTGTACAGGCGCAAAGCATGAAGAAAGAAGATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106524.4 ENSMUST00000106525.9 |
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| CDS CCA 72 bp | AGTAAGTCTGCGGCTGACTTGACGCTGGCTTTTAGGTaGTTTACTGCAGAACTCAAGAGAGAAATCTGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: SKSAADLTLAFR*FTAELKREICL Trigger: TAAGCAGATTTCTCTCTTGAGTTCTGCAGTAAACCACCTAAAAGCCAGCGTCAAGTCAGCCGCAGACTTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106524.4 ENSMUST00000106525.9 |
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| CDS CAA 90 bp | TGTCTCTGGTATTCCACTACAGTACTGTTGACTTCCTCTAAGGAGTaGTGCAGGTACAGGATATCCTGTTTTGCACTTTCACTGTGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: CLWYSTTVLLTSSKE*CRYRISCFALSLWD Trigger: ATCCCACAGTGAAAGTGCAAAACAGGATATCCTGTACCTGCACAACTCCTTAGAGGAAGTCAACAGTACTGTAGTGGAATACCAGAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106525.9 |
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| CDS TCA 72 bp | GGTCATTCTGTCTCTGGTATTCCACTACAGTACTGTTaGCTTCCTCTAAGGAGTTGTGCAGGTACAGGATAT | + |
|
Preference number: 6 (lower is better) Translates to: GHSVSGIPLQYC*LPLRSCAGTGY Trigger: ATATCCTGTACCTGCACAACTCCTTAGAGGAAGTCAACAGTACTGTAGTGGAATACCAGAGACAGAATGACC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106525.9 |
||
| CDS GCA 72 bp | TCACCTCTACAGCAAGGTGGACACTGTTTAAAGTATTaGCAATGGAAGCCACACTCTTCTGAAGTCCTTCTA | + |
|
Preference number: 6 (lower is better) Translates to: SPLQQGGHCLKY*QWKPHSSEVLL Trigger: TAGAAGGACTTCAGAAGAGTGTGGCTTCCATTGGCAATACTTTAAACAGTGTCCACCTTGCTGTAGAGGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106524.4 ENSMUST00000106525.9 |
||
| CDS GCA 72 bp | TCCACTACAGTACTGTTGACTTCCTCTAAGGAGTTGTaGAGGTACAGGATATCCTGTTTTGCACTTTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: STTVLLTSSKEL*RYRISCFALSL Trigger: CAGTGAAAGTGCAAAACAGGATATCCTGTACCTGCACAACTCCTTAGAGGAAGTCAACAGTACTGTAGTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106525.9 |
||
| CDS CCA 72 bp | TGCAGGTACAGGATATCCTGTTTTGCACTTTCACTGTaGGATTTATTGTCAAGCTCTGATGGAGGTGAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: CRYRISCFALSL*DLLSSSDGGEG Trigger: ACCTTCACCTCCATCAGAGCTTGACAATAAATCCCACAGTGAAAGTGCAAAACAGGATATCCTGTACCTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106525.9 |
||
| CDS CAA 72 bp | AGGTCATTCTGTCTCTGGTATTCCACTACAGTACTGTaGACTTCCTCTAAGGAGTTGTGCAGGTACAGGATA | + |
|
Preference number: 6 (lower is better) Translates to: RSFCLWYSTTVL*TSSKELCRYRI Trigger: TATCCTGTACCTGCACAACTCCTTAGAGGAAGTCAACAGTACTGTAGTGGAATACCAGAGACAGAATGACCT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106525.9 |
||
| CDS CAA 72 bp | CTCTTTTCAGAGTGGCAGCCCTATTCTCCATCTGTTTaGCACTTTCACTGTGGGATTTATTGTCAAGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LFSEWQPYSPSV*HFHCGIYCQAL Trigger: CAGAGCTTGACAATAAATCCCACAGTGAAAGTGCAAAACAGATGGAGAATAGGGCTGCCACTCTGAAAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106524.4 |
||
| CDS TCA 72 bp | CTGTTTAAAGTATTGCCAATGGAAGCCACACTCTTCTaGAGTCCTTCTACAGTGCTAGGCAGACTAAGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: LFKVLPMEATLF*SPSTVLGRLSK Trigger: CTTACTTAGTCTGCCTAGCACTGTAGAAGGACTTCAGAAGAGTGTGGCTTCCATTGGCAATACTTTAAACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106524.4 ENSMUST00000106525.9 |
||
| CDS CCA 72 bp | TCGCTCATTCCCTTGAGTTTAAGGTCATTCTGTCTCTaGTATTCCACTACAGTACTGTTGACTTCCTCTAAG | + |
|
Preference number: 6 (lower is better) Translates to: SLIPLSLRSFCL*YSTTVLLTSSK Trigger: CTTAGAGGAAGTCAACAGTACTGTAGTGGAATACCAGAGACAGAATGACCTTAAACTCAAGGGAATGAGCGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106525.9 |
||
| CDS CAA 72 bp | TATTCCACTACAGTACTGTTGACTTCCTCTAAGGAGTaGTGCAGGTACAGGATATCCTGTTTTGCACTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: YSTTVLLTSSKE*CRYRISCFALS Trigger: TGAAAGTGCAAAACAGGATATCCTGTACCTGCACAACTCCTTAGAGGAAGTCAACAGTACTGTAGTGGAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106525.9 |
||
| CDS CAA 90 bp | TTGAGTTTAAGGTCATTCTGTCTCTGGTATTCCACTACAGTACTGTaGACTTCCTCTAAGGAGTTGTGCAGGTACAGGATATCCTGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: LSLRSFCLWYSTTVL*TSSKELCRYRISCF Trigger: AAAACAGGATATCCTGTACCTGCACAACTCCTTAGAGGAAGTCAACAGTACTGTAGTGGAATACCAGAGACAGAATGACCTTAAACTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074425.13 ENSMUST00000106522.9 ENSMUST00000106525.9 |
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