Pregenerated sensors for EFCAB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068617Ensembl transcript IDs: ENSMUST00000090277.3, ENSMUST00000228998.2, ENSMUST00000229121.2, ENSMUST00000229825.2
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAGCAGGTGCTCTGAATGAAAACCAACAGGACTGGACAATAAACTaGGTGGCGGACCTCTGCTGCAGAGGCTGTGGTTCTTCAGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: PAGALNENQQDWTIN*VADLCCRGCGSSGR Trigger: CCTCCCTGAAGAACCACAGCCTCTGCAGCAGAGGTCCGCCACCCAGTTTATTGTCCAGTCCTGTTGGTTTTCATTCAGAGCACCTGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229121.2 |
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| 3UTR CCA 90 bp | GGACTGGACAATAAACTGGGTGGCGGACCTCTGCTGCAGAGGCTGTaGTTCTTCAGGGAGGACTTAGAAATGTATCTCAAGATGAGAGGA | + |
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Preference number: 1 (lower is better) Translates to: GLDNKLGGGPLLQRL*FFREDLEMYLKMRG Trigger: TCCTCTCATCTTGAGATACATTTCTAAGTCCTCCCTGAAGAACCACAGCCTCTGCAGCAGAGGTCCGCCACCCAGTTTATTGTCCAGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229121.2 |
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| 3UTR CCA 90 bp | ATGATCTGGGTGCACCATGCTTGCTCTTCTTGTTTTCTCACACCATaGAATCCAGCAGTCCCACTGGGATGGCTCAGTCCAGGTGTTATT | + |
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Preference number: 1 (lower is better) Translates to: MIWVHHACSSCFLTP*NPAVPLGWLSPGVI Trigger: AATAACACCTGGACTGAGCCATCCCAGTGGGACTGCTGGATTCCATGGTGTGAGAAAACAAGAAGAGCAAGCATGGTGCACCCAGATCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229121.2 |
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| 3UTR TCA 90 bp | GAGAGGCATGACACTAGAAGCCAGAGCAAAGCTGGCCTTGGCATCTaGTTGCAATGCCTTCAGAGATTAACTAAAAGCTGGACTCATGAA | + |
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Preference number: 1 (lower is better) Translates to: ERHDTRSQSKAGLGI*LQCLQRLTKSWTHE Trigger: TTCATGAGTCCAGCTTTTAGTTAATCTCTGAAGGCATTGCAATCAGATGCCAAGGCCAGCTTTGCTCTGGCTTCTAGTGTCATGCCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090277.3 |
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| 3UTR TCA 90 bp | CCAAGAACTTCAAGTTCCTGGATGAATAGCCCAGTTCTGTTCCCATaGTCTGGGTGCACCATGCTTGCTCTTCTTGTTTTCTCACACCAT | + |
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Preference number: 1 (lower is better) Translates to: PRTSSSWMNSPVLFP*SGCTMLALLVFSHH Trigger: ATGGTGTGAGAAAACAAGAAGAGCAAGCATGGTGCACCCAGATCATGGGAACAGAACTGGGCTATTCATCCAGGAACTTGAAGTTCTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229121.2 |
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| 3UTR GCA 90 bp | AGTGATCTTTTCCATCTTGATATGCTTCAGGATCCAAGCCTGCTCTaGTCTGCTCTTCAGCAAATACAGACCATCTCCTCTGTGTCAGAC | + |
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Preference number: 1 (lower is better) Translates to: SDLFHLDMLQDPSLL*SALQQIQTISSVSD Trigger: GTCTGACACAGAGGAGATGGTCTGTATTTGCTGAAGAGCAGAGCAGAGCAGGCTTGGATCCTGAAGCATATCAAGATGGAAAAGATCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229825.2 |
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| 3UTR GCA 90 bp | GAATTTAAAGCTGAGACTCTCACAGCTGCAGAAAGTAGGGTGCTATaGGACTATGACCACCATTACACAGAAAGGAAGCTGTGTCAGTCA | + |
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Preference number: 1 (lower is better) Translates to: EFKAETLTAAESRVL*DYDHHYTERKLCQS Trigger: TGACTGACACAGCTTCCTTTCTGTGTAATGGTGGTCATAGTCGCATAGCACCCTACTTTCTGCAGCTGTGAGAGTCTCAGCTTTAAATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090277.3 |
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| 3UTR GCA 90 bp | TATGTGAATTTAAAGCTGAGACTCTCACAGCTGCAGAAAGTAGGGTaGTATGCGACTATGACCACCATTACACAGAAAGGAAGCTGTGTC | + |
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Preference number: 1 (lower is better) Translates to: YVNLKLRLSQLQKVG*YATMTTITQKGSCV Trigger: GACACAGCTTCCTTTCTGTGTAATGGTGGTCATAGTCGCATAGCACCCTACTTTCTGCAGCTGTGAGAGTCTCAGCTTTAAATTCACATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090277.3 |
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| 3UTR TCA 90 bp | TTGTGTTGGCATAACTGGCCAGATCCATTATTATACAATGTGACATaGTCCCTGATAATAGGCTGTATACTGGACATCAGACAGTGTGAA | + |
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Preference number: 1 (lower is better) Translates to: LCWHNWPDPLLYNVT*SLIIGCILDIRQCE Trigger: TTCACACTGTCTGATGTCCAGTATACAGCCTATTATCAGGGATCATGTCACATTGTATAATAATGGATCTGGCCAGTTATGCCAACACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090277.3 |
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| 3UTR TCA 90 bp | CTTGCATTCATCTTACAGCATTCACATGTTACAGGTAAACAGCCATaGAGCAGAAATAACCTGTCTGCCATTAGACAAACAAACAAACAA | + |
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Preference number: 1 (lower is better) Translates to: LAFILQHSHVTGKQP*SRNNLSAIRQTNKQ Trigger: TTGTTTGTTTGTTTGTCTAATGGCAGACAGGTTATTTCTGCTTCATGGCTGTTTACCTGTAACATGTGAATGCTGTAAGATGAATGCAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090277.3 |
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| 3UTR-3UTR CCA 90 bp | GTTCCCATGATCTGGGTGCACCATGCTTGCTCTTCTTGTTTTCTCACACCATGGATCCAGCAGTCCCACTaGGATGGCTCAGTCCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: VPMIWVHHACSSCFLTPWIQQSH*DGSVQV Trigger: CACCTGGACTGAGCCATCCCAGTGGGACTGCTGGAT...CCATGGTGTGAGAAAACAAGAAGAGCAAGCATGGTGCACCCAGATCATGGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229121.2 |
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| 3UTR-3UTR TCA 90 bp | ATGCTTCAGGATCCAAGCCTGCTCTGCTCTGCTCTTCAGCAAATACAGACCATCCCTCAGAGGGCTGCTTaGGAAGGCTGTTCTTCAGCA | + |
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Preference number: 2 (lower is better) Translates to: MLQDPSLLCSALQQIQTIPQRAA*EGCSSA Trigger: TGCTGAAGAACAGCCTTCTCAAGCAGCCCTCTGAGG...GATGGTCTGTATTTGCTGAAGAGCAGAGCAGAGCAGGCTTGGATCCTGAAGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229825.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCAAATTCCATCTGGCTCTTTGGATCAGGCAGGCAAGGCCCAAAGGCTTCCAGACAGCTTCCCATCATaGTCATGGTCCTGTGAGATG | + |
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Preference number: 2 (lower is better) Translates to: LQIPSGSLDQAGKAQRLPDSFPS*SWSCEM Trigger: CATCTCACAGGACCATGACCATGATGGGAAGCTGTC...TGGAAGCCTTTGGGCCTTGCCTGCCTGATCCAAAGAGCCAGATGGAATTTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228998.2 |
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| 3UTR CAA 90 bp | CCATGTGCTATGTCACAGGCCTTCAGGGATGCATGGGGTGACACTTaGAGGAACAGATCTGGCCCCTTGATTTATGTTGTGTTCAAAGTC | + |
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Preference number: 2 (lower is better) Translates to: PCAMSQAFRDAWGDT*RNRSGPLIYVVFKV Trigger: GACTTTGAACACAACATAAATCAAGGGGCCAGATCTGTTCCTCAAAGTGTCACCCCATGCATCCCTGAAGGCCTGTGACATAGCACATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229825.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGTGACTTTCTCTCAGTGTAACTCCAATCTAGCAAGTGAAAGATCTGTATGCAGCAGGTGCTCTGAATaGAAACCAACAGGACTGGAC | + |
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Preference number: 2 (lower is better) Translates to: AVTFSQCNSNLASERSVCSRCSE*KPTGLD Trigger: GTCCAGTCCTGTTGGTTTTCATTCAGAGCACCTGCT...GCATACAGATCTTTCACTTGCTAGATTGGAGTTACACTGAGAGAAAGTCACTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229121.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCAAATTCCATCTGGCTCTTTGGATCAGGCAGGCAAGGCCCAAAGGCTTCCACAGATGAACTTAATGTaGCTCCTTTTGTACTTACTC | + |
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Preference number: 2 (lower is better) Translates to: LQIPSGSLDQAGKAQRLPQMNLM*LLLYLL Trigger: GAGTAAGTACAAAAGGAGCCACATTAAGTTCATCTG...TGGAAGCCTTTGGGCCTTGCCTGCCTGATCCAAAGAGCCAGATGGAATTTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228998.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCCATCCTCAAGCAGAAATGTCCTCCACAGTCTCAATTATATTGCCCCTTTCGAAAACCAACAGGACTaGACAATAAACTGGGTGGCG | + |
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Preference number: 2 (lower is better) Translates to: SPSSSRNVLHSLNYIAPFENQQD*TINWVA Trigger: CGCCACCCAGTTTATTGTCCAGTCCTGTTGGTTTTC...GAAAGGGGCAATATAATTGAGACTGTGGAGGACATTTCTGCTTGAGGATGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229121.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTCTTGGATTAACTTACCCAGACACATAGTGCCTGAAGACAGACATCAAATTGCCTTCAGGGATGCATaGGGTGACACTTTGAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: LSWINLPRHIVPEDRHQIAFRDA*GDTLRN Trigger: GTTCCTCAAAGTGTCACCCCATGCATCCCTGAAGGC...AATTTGATGTCTGTCTTCAGGCACTATGTGTCTGGGTAAGTTAATCCAAGAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229825.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCCATCCTCAAGCAGAAATGTCCTCCACAGTCTCAATTATATTGCCCCTTTCCTTCTAAGGCAGCAGTaGCTTTCTCTCAGTGTAACT | + |
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Preference number: 2 (lower is better) Translates to: SPSSSRNVLHSLNYIAPFLLRQQ*LSLSVT Trigger: AGTTACACTGAGAGAAAGTCACTGCTGCCTTAGAAG...GAAAGGGGCAATATAATTGAGACTGTGGAGGACATTTCTGCTTGAGGATGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229121.2 |
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| 3UTR-3UTR GCA 90 bp | CAGTCGATGCACCTGAAACTTACTGTGAAGGCAGACTATATTCAAGCCAGACAGGTTAACCCTCCCAATTaGTCTCCTATGAGTACAAAG | + |
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Preference number: 2 (lower is better) Translates to: QSMHLKLTVKADYIQARQVNPPN*SPMSTK Trigger: CTTTGTACTCATAGGAGAGCAATTGGGAGGGTTAAC...CTGTCTGGCTTGAATATAGTCTGCCTTCACAGTAAGTTTCAGGTGCATCGACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090277.3 |
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| 3UTR-3UTR GCA 90 bp | GCTTGTGGCACTATGTCCGGTACATATTTACAACAAACTAAATGTCCTGTCATTTCCTCCTCAGAGGGCTaGTTGAGAAGGCTGTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: ACGTMSGTYLQQTKCPVISSSEG*LRRLFF Trigger: GAAGAACAGCCTTCTCAAGCAGCCCTCTGAGGAGGA...AATGACAGGACATTTAGTTTGTTGTAAATATGTACCGGACATAGTGCCACAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229825.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCTCTCTTGGATTAACTTACCCAGACACATAGTGCCTGAAGACAGACATCAAGACAGCTTCCCATCATaGTCATGGTCCATTTTCTTA | + |
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Preference number: 2 (lower is better) Translates to: GLSWINLPRHIVPEDRHQDSFPS*SWSIFL Trigger: TAAGAAAATGGACCATGACCATGATGGGAAGCTGTC...TTGATGTCTGTCTTCAGGCACTATGTGTCTGGGTAAGTTAATCCAAGAGAGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229825.2 |
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| 3UTR-3UTR TCA 90 bp | AAGAAACAGTCGATGCACCTGAAACTTACTGTGAAGGCAGACTATATTCAAGCCGTGGCTATGAAAGTGTaGGTGACAAATCTTTGCCCT | + |
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Preference number: 2 (lower is better) Translates to: KKQSMHLKLTVKADYIQAVAMKV*VTNLCP Trigger: AGGGCAAAGATTTGTCACTCACACTTTCATAGCCAC...GGCTTGAATATAGTCTGCCTTCACAGTAAGTTTCAGGTGCATCGACTGTTTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090277.3 |
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| 3UTR-3UTR GCA 90 bp | ACACAGAAAGGAAGCTGTGTCAGTCAGGATGTACTGGGTTTCATTTATTCAAAGATGTATCCTTCATCTTaGTGTGTAGTCCCCAGTGCC | + |
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Preference number: 2 (lower is better) Translates to: TQKGSCVSQDVLGFIYSKMYPSS*CVVPSA Trigger: GGCACTGGGGACTACACAGCAAGATGAAGGATACAT...CTTTGAATAAATGAAACCCAGTACATCCTGACTGACACAGCTTCCTTTCTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090277.3 |
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| 3UTR-3UTR GCA 90 bp | TGTTCCCATGATCTGGGTGCACCATGCTTGCTCTTCTTGTTTTCTCACACCATGATGGAGCAGTACATATaGTTATTTTCAGTTCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: CSHDLGAPCLLFLFSHTMMEQYI*LFSVLG Trigger: GCCAAGAACTGAAAATAAGCATATGTACTGCTCCAT...CATGGTGTGAGAAAACAAGAAGAGCAAGCATGGTGCACCCAGATCATGGGAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229121.2 |
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| 3UTR CAA 90 bp | GTGCCCTTTCATGACCACATGATGCCACAATACCTGATGGAGTTTTaGTGTTGGCATAACTGGCCAGATCCATTATTATACAATGTGACA | + |
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Preference number: 2 (lower is better) Translates to: VPFHDHMMPQYLMEF*CWHNWPDPLLYNVT Trigger: TGTCACATTGTATAATAATGGATCTGGCCAGTTATGCCAACACAAAAACTCCATCAGGTATTGTGGCATCATGTGGTCATGAAAGGGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090277.3 |
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| 3UTR CAA 90 bp | GCAGAAATGTCCTCCACAGTCTCAATTATATTGCCCCTTTCACCTTaGACAGAAGAATTTAATCCTTCCTTGTCTTCTAAGGCAGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: AEMSSTVSIILPLSP*TEEFNPSLSSKAAV Trigger: CACTGCTGCCTTAGAAGACAAGGAAGGATTAAATTCTTCTGTCAAAGGTGAAAGGGGCAATATAATTGAGACTGTGGAGGACATTTCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229121.2 |
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| 3UTR-3UTR TCA 90 bp | CCACCATTACACAGAAAGGAAGCTGTGTCAGTCAGGATGTACTGGGTTTCATTTACACACCATTTTGGCTaGTATTTCCCAATGAAGCTA | + |
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Preference number: 2 (lower is better) Translates to: PPLHRKEAVSVRMYWVSFTHHFG*YFPMKL Trigger: TAGCTTCATTGGGAAATATCAGCCAAAATGGTGTGT...AAATGAAACCCAGTACATCCTGACTGACACAGCTTCCTTTCTGTGTAATGGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090277.3 |
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| 3UTR CAA 90 bp | TCTCTCCATCCTCAAGCAGAAATGTCCTCCACAGTCTCAATTATATaGCCCCTTTCACCTTTGACAGAAGAATTTAATCCTTCCTTGTCT | + |
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Preference number: 2 (lower is better) Translates to: SLHPQAEMSSTVSII*PLSPLTEEFNPSLS Trigger: AGACAAGGAAGGATTAAATTCTTCTGTCAAAGGTGAAAGGGGCAATATAATTGAGACTGTGGAGGACATTTCTGCTTGAGGATGGAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229121.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTTTCATGACCACATGATGCCACAATACCTGATGGAGTTTTTGTGTTGGCATCAATTACATGCTAACTaGTATGGTGGCTATGAAAGT | + |
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Preference number: 2 (lower is better) Translates to: PFHDHMMPQYLMEFLCWHQLHAN*YGGYES Trigger: ACTTTCATAGCCACCATAGCAGTTAGCATGTAATTG...ATGCCAACACAAAAACTCCATCAGGTATTGTGGCATCATGTGGTCATGAAAGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090277.3 |
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| 3UTR-3UTR GCA 90 bp | CCCTTTCATGACCACATGATGCCACAATACCTGATGGAGTTTTTGTGTTGGCATGAGAAAACTTCTATCTaGTCATGGATAGAGGGTAAT | + |
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Preference number: 2 (lower is better) Translates to: PFHDHMMPQYLMEFLCWHEKTSI*SWIEGN Trigger: ATTACCCTCTATCCATGAGCAGATAGAAGTTTTCTC...ATGCCAACACAAAAACTCCATCAGGTATTGTGGCATCATGTGGTCATGAAAGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090277.3 |
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| 3UTR-3UTR CCA 90 bp | CCACCATTACACAGAAAGGAAGCTGTGTCAGTCAGGATGTACTGGGTTTCATTTCAGATGAACTTAATGTaGCTCCTTTTGTACTTACTC | + |
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Preference number: 2 (lower is better) Translates to: PPLHRKEAVSVRMYWVSFQMNLM*LLLYLL Trigger: GAGTAAGTACAAAAGGAGCCACATTAAGTTCATCTG...AAATGAAACCCAGTACATCCTGACTGACACAGCTTCCTTTCTGTGTAATGGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090277.3 |
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| 3UTR-3UTR TCA 90 bp | GAAATATCTTTAACAATGTTAACCTCTCTTGCCAAACCCAGCATATCTGAGGGTTGGCATCTTCTGAGCTaGGAAGAACAGATGAACTTA | + |
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Preference number: 2 (lower is better) Translates to: EISLTMLTSLAKPSISEGWHLLS*EEQMNL Trigger: TAAGTTCATCTGTTCTTCTCAGCTCAGAAGATGCCA...ACCCTCAGATATGCTGGGTTTGGCAAGAGAGGTTAACATTGTTAAAGATATTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090277.3 ENSMUST00000228998.2 |
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| 3UTR-3UTR TCA 90 bp | GGTGAAATATCTTTAACAATGTTAACCTCTCTTGCCAAACCCAGCATATCTGAGTGGCATCTTCTGAGCTaGGAAGAACAGATGAACTTA | + |
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Preference number: 2 (lower is better) Translates to: GEISLTMLTSLAKPSISEWHLLS*EEQMNL Trigger: TAAGTTCATCTGTTCTTCTCAGCTCAGAAGATGCCA...CTCAGATATGCTGGGTTTGGCAAGAGAGGTTAACATTGTTAAAGATATTTCACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090277.3 ENSMUST00000228998.2 |
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| 3UTR-3UTR GCA 90 bp | TACAACAAACTAAATGTCCTGTCATTTGTAGTATGGTTAGGTGTCTTCCTTTCAAAGCCTGCTCTGCTCTaGTCTTCAGCAAATACAGAC | + |
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Preference number: 2 (lower is better) Translates to: YNKLNVLSFVVWLGVFLSKPALL*SSANTD Trigger: GTCTGTATTTGCTGAAGAGCAGAGCAGAGCAGGCTT...TGAAAGGAAGACACCTAACCATACTACAAATGACAGGACATTTAGTTTGTTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229825.2 |
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| 3UTR-3UTR CCA 90 bp | ATCTCATCTGAAGTAATCTCTCCATCCTCAAGCAGAAATGTCCTCCACAGTCTCCTTATTTTCAGTTCTTaGCTCTTCATGGTAATTACG | + |
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Preference number: 2 (lower is better) Translates to: ISSEVISPSSSRNVLHSLLIFSS*LFMVIT Trigger: CGTAATTACCATGAAGAGCCAAGAACTGAAAATAAG...GAGACTGTGGAGGACATTTCTGCTTGAGGATGGAGAGATTACTTCAGATGAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229121.2 |
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| 3UTR-3UTR TCA 90 bp | GGTGAAATATCTTTAACAATGTTAACCTCTCTTGCCAAACCCAGCATATCTGAGTATCTGAGGGTGTCCTaGACTAAAATACATACAAGT | + |
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Preference number: 2 (lower is better) Translates to: GEISLTMLTSLAKPSISEYLRVS*TKIHTS Trigger: ACTTGTATGTATTTTAGTTCAGGACACCCTCAGATA...CTCAGATATGCTGGGTTTGGCAAGAGAGGTTAACATTGTTAAAGATATTTCACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090277.3 ENSMUST00000228998.2 |
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| 3UTR-3UTR GCA 90 bp | ACACAGAAAGGAAGCTGTGTCAGTCAGGATGTACTGGGTTTCATTTATTCAAAGCTCTTCACCACTTATTaGTATGAAGGAAACTATAGT | + |
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Preference number: 2 (lower is better) Translates to: TQKGSCVSQDVLGFIYSKLFTTY*YEGNYS Trigger: ACTATAGTTTCCTTCATAGCAATAAGTGGTGAAGAG...CTTTGAATAAATGAAACCCAGTACATCCTGACTGACACAGCTTCCTTTCTGTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090277.3 |
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| 3UTR CCA 72 bp | GCTCTGAATGAAAACCAACAGGACTGGACAATAAACTaGGTGGCGGACCTCTGCTGCAGAGGCTGTGGTTCT | + |
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Preference number: 3 (lower is better) Translates to: ALNENQQDWTIN*VADLCCRGCGS Trigger: AGAACCACAGCCTCTGCAGCAGAGGTCCGCCACCCAGTTTATTGTCCAGTCCTGTTGGTTTTCATTCAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229121.2 |
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| 3UTR CCA 72 bp | GATCCAGCAGGTGCTCTGAATGAAAACCAACAGGACTaGACAATAAACTGGGTGGCGGACCTCTGCTGCAGA | + |
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Preference number: 3 (lower is better) Translates to: DPAGALNENQQD*TINWVADLCCR Trigger: TCTGCAGCAGAGGTCCGCCACCCAGTTTATTGTCCAGTCCTGTTGGTTTTCATTCAGAGCACCTGCTGGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229121.2 |
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| 3UTR CCA 72 bp | GTGCACCATGCTTGCTCTTCTTGTTTTCTCACACCATaGAATCCAGCAGTCCCACTGGGATGGCTCAGTCCA | + |
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Preference number: 3 (lower is better) Translates to: VHHACSSCFLTP*NPAVPLGWLSP Trigger: TGGACTGAGCCATCCCAGTGGGACTGCTGGATTCCATGGTGTGAGAAAACAAGAAGAGCAAGCATGGTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229121.2 |
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| 3UTR GCA 72 bp | CCCAGTTCTGTTCCCATGATCTGGGTGCACCATGCTTaGTCTTCTTGTTTTCTCACACCATGGAATCCAGCA | + |
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Preference number: 3 (lower is better) Translates to: PSSVPMIWVHHA*SSCFLTPWNPA Trigger: TGCTGGATTCCATGGTGTGAGAAAACAAGAAGAGCAAGCATGGTGCACCCAGATCATGGGAACAGAACTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229121.2 |
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| 3UTR CCA 72 bp | AATAAACTGGGTGGCGGACCTCTGCTGCAGAGGCTGTaGTTCTTCAGGGAGGACTTAGAAATGTATCTCAAG | + |
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Preference number: 3 (lower is better) Translates to: NKLGGGPLLQRL*FFREDLEMYLK Trigger: CTTGAGATACATTTCTAAGTCCTCCCTGAAGAACCACAGCCTCTGCAGCAGAGGTCCGCCACCCAGTTTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229121.2 |
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| 3UTR GCA 72 bp | CACTGGGATGGCTCAGTCCAGGTGTTATTCTTTAGTTaGAGCGGTCAGTCTTCTTCAACATGGAAAGTGTGG | + |
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Preference number: 3 (lower is better) Translates to: HWDGSVQVLFFS*SGQSSSTWKVW Trigger: CCACACTTTCCATGTTGAAGAAGACTGACCGCTGCAACTAAAGAATAACACCTGGACTGAGCCATCCCAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229121.2 |
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| 3UTR CCA 72 bp | CTTGTTTTCTCACACCATGGAATCCAGCAGTCCCACTaGGATGGCTCAGTCCAGGTGTTATTCTTTAGTTGC | + |
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Preference number: 3 (lower is better) Translates to: LVFSHHGIQQSH*DGSVQVLFFSC Trigger: GCAACTAAAGAATAACACCTGGACTGAGCCATCCCAGTGGGACTGCTGGATTCCATGGTGTGAGAAAACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229121.2 |
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| 3UTR-3UTR CAA 90 bp | TTAGGCTTTCTCAGGAGTATTTCAAATTCTGATGTCCCAAGTGAACAGGAAGCTGCATGGGGTGACACTTaGAGGAACAGATCTGGCCCC | + |
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Preference number: 3 (lower is better) Translates to: LGFLRSISNSDVPSEQEAAWGDT*RNRSGP Trigger: GGGGCCAGATCTGTTCCTCAAAGTGTCACCCCATGC...AGCTTCCTGTTCACTTGGGACATCAGAATTTGAAATACTCCTGAGAAAGCCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229825.2 |
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| 3UTR TCA 72 bp | GACACTAGAAGCCAGAGCAAAGCTGGCCTTGGCATCTaGTTGCAATGCCTTCAGAGATTAACTAAAAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: DTRSQSKAGLGI*LQCLQRLTKSW Trigger: CCAGCTTTTAGTTAATCTCTGAAGGCATTGCAATCAGATGCCAAGGCCAGCTTTGCTCTGGCTTCTAGTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090277.3 |
||
| 3UTR TCA 72 bp | TCAAGTTCCTGGATGAATAGCCCAGTTCTGTTCCCATaGTCTGGGTGCACCATGCTTGCTCTTCTTGTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: SSSWMNSPVLFP*SGCTMLALLVF Trigger: GAAAACAAGAAGAGCAAGCATGGTGCACCCAGATCATGGGAACAGAACTGGGCTATTCATCCAGGAACTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229121.2 |
||
| 3UTR-3UTR CAA 90 bp | CCATGCTTGCTCTTCTTGTTTTCTCACACCATGGAATCCAGCAGTCCCACTGGGGCTTATTTTCAGTTCTaGGCTCTTCATGGTAATTAC | + |
|
Preference number: 3 (lower is better) Translates to: PCLLFLFSHTMESSSPTGAYFQF*ALHGNY Trigger: GTAATTACCATGAAGAGCCAAGAACTGAAAATAAGC...CCCAGTGGGACTGCTGGATTCCATGGTGTGAGAAAACAAGAAGAGCAAGCATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000229121.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAGTGACTTTCTCTCAGTGTAACTCCAATCTAGCAAGTGAAAGATCTGTATGCTGGCACCACCTTGACTaGCAGATGGAGCAGTACATA | + |
|
Preference number: 3 (lower is better) Translates to: AVTFSQCNSNLASERSVCWHHLD*QMEQYI Trigger: TATGTACTGCTCCATCTGCAAGTCAAGGTGGTGCCA...GCATACAGATCTTTCACTTGCTAGATTGGAGTTACACTGAGAGAAAGTCACTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229121.2 |
||
| 3UTR TCA 72 bp | AGTTGTGGATGGAGTAAAACCTCTGATTCCTTTTGTTaGTCCCATGTGCTATGTCACAGGCCTTCAGGGATG | + |
|
Preference number: 3 (lower is better) Translates to: SCGWSKTSDSFC*SHVLCHRPSGM Trigger: CATCCCTGAAGGCCTGTGACATAGCACATGGGATCAACAAAAGGAATCAGAGGTTTTACTCCATCCACAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229825.2 |
||
| 3UTR GCA 72 bp | TTAAAGCTGAGACTCTCACAGCTGCAGAAAGTAGGGTaGTATGCGACTATGACCACCATTACACAGAAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LKLRLSQLQKVG*YATMTTITQKG Trigger: TCCTTTCTGTGTAATGGTGGTCATAGTCGCATAGCACCCTACTTTCTGCAGCTGTGAGAGTCTCAGCTTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090277.3 |
||
| 3UTR CCA 72 bp | GAACTGAGAGAATCAGCTCATTCTTGTGTGACCCCTTaGTCAGTTTCCGTGAGGCAGTCTTACAGTTATTTC | + |
|
Preference number: 3 (lower is better) Translates to: ELRESAHSCVTP*SVSVRQSYSYF Trigger: GAAATAACTGTAAGACTGCCTCACGGAAACTGACCAAGGGGTCACACAAGAATGAGCTGATTCTCTCAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229825.2 |
||
| 3UTR TCA 72 bp | AGTGAACTGCATCTCACCACATGGCATCTTCTGAGCTaGGAAGAACAGATGAACTTAATGTGGCTCCTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: SELHLTTWHLLS*EEQMNLMWLLL Trigger: CAAAAGGAGCCACATTAAGTTCATCTGTTCTTCTCAGCTCAGAAGATGCCATGTGGTGAGATGCAGTTCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090277.3 ENSMUST00000228998.2 |
||
| 3UTR TCA 72 bp | TTTTTCGGGTATTCTCTAGAGCTTGTACACATCAGGTaGAGGTTCCACATAGTTAACCCTCCCAATTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: FFGYSLELVHIR*RFHIVNPPNCS Trigger: AGAGCAATTGGGAGGGTTAACTATGTGGAACCTTCACCTGATGTGTACAAGCTCTAGAGAATACCCGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090277.3 |
||
| 3UTR-3UTR CAA 90 bp | GACTTAGAAATGTATCTCAAGATGAGAGGACAATATCCGGAGCCCTTGACGTCCTTAAGAAGTTCAAATTaGTTTCCTTCTTCCAGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: DLEMYLKMRGQYPEPLTSLRSSN*FPSSRH Trigger: GTGCCTGGAAGAAGGAAACAAATTTGAACTTCTTAA...GGACGTCAAGGGCTCCGGATATTGTCCTCTCATCTTGAGATACATTTCTAAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229121.2 |
||
| 3UTR TCA 72 bp | GTGTATTCCAGTTTTAGACACAGTACAGTCCAGGGTTaGCCTCTTAGGCTTTCTCAGGAGTATTTCAAATTC | + |
|
Preference number: 3 (lower is better) Translates to: VYSSFRHSTVQG*PLRLSQEYFKF Trigger: GAATTTGAAATACTCCTGAGAAAGCCTAAGAGGTCAACCCTGGACTGTACTGTGTCTAAAACTGGAATACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229825.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGAGGCAGTCTTACAGTTATTTCTTAGTTGACTGTTGTAGCTTGTGGCACTATCTTCCTTTCAGAAAGTaGGGCTCTCTTGGATTAACT | + |
|
Preference number: 3 (lower is better) Translates to: VRQSYSYFLVDCCSLWHYLPFRK*GSLGLT Trigger: AGTTAATCCAAGAGAGCCCAACTTTCTGAAAGGAAG...ATAGTGCCACAAGCTACAACAGTCAACTAAGAAATAACTGTAAGACTGCCTCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229825.2 |
||
| 3UTR TCA 72 bp | AACAATGTTAACCTCTCTTGCCAAACCCAGCATATCTaGGGGTGTCCTGAACTAAAATACATACAAGTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: NNVNLSCQTQHI*GCPELKYIQVN Trigger: GTTCACTTGTATGTATTTTAGTTCAGGACACCCTCAGATATGCTGGGTTTGGCAAGAGAGGTTAACATTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090277.3 ENSMUST00000228998.2 |
||
| 3UTR TCA 72 bp | CCTGATAATAGGCTGTATACTGGACATCAGACAGTGTaGAGCCATGATATTGTATTACATGTGGTGATGATG | + |
|
Preference number: 3 (lower is better) Translates to: PDNRLYTGHQTV*SHDIVLHVVMM Trigger: CATCATCACCACATGTAATACAATATCATGGCTTCACACTGTCTGATGTCCAGTATACAGCCTATTATCAGG 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090277.3 |
||
| 3UTR TCA 72 bp | ATTGGAGTACTAGAATTCTCTTTAGCTGAGAATGTGTaGTCAGCAAGGAGTTTTGAAAACCCTCGCTCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: IGVLEFSLAENV*SARSFENPRSC Trigger: ACAAGAGCGAGGGTTTTCAAAACTCCTTGCTGATCACACATTCTCAGCTAAAGAGAATTCTAGTACTCCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229825.2 |
||
| 3UTR CCA 72 bp | CACATGATGCCACAATACCTGATGGAGTTTTTGTGTTaGCATAACTGGCCAGATCCATTATTATACAATGTG | + |
|
Preference number: 3 (lower is better) Translates to: HMMPQYLMEFLC*HNWPDPLLYNV Trigger: CACATTGTATAATAATGGATCTGGCCAGTTATGCCAACACAAAAACTCCATCAGGTATTGTGGCATCATGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090277.3 |
||
| 3UTR TCA 72 bp | CATAACTGGCCAGATCCATTATTATACAATGTGACATaGTCCCTGATAATAGGCTGTATACTGGACATCAGA | + |
|
Preference number: 3 (lower is better) Translates to: HNWPDPLLYNVT*SLIIGCILDIR Trigger: TCTGATGTCCAGTATACAGCCTATTATCAGGGATCATGTCACATTGTATAATAATGGATCTGGCCAGTTATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090277.3 |
||
| 3UTR TCA 72 bp | ATCTTACAGCATTCACATGTTACAGGTAAACAGCCATaGAGCAGAAATAACCTGTCTGCCATTAGACAAACA | + |
|
Preference number: 3 (lower is better) Translates to: ILQHSHVTGKQP*SRNNLSAIRQT Trigger: TGTTTGTCTAATGGCAGACAGGTTATTTCTGCTTCATGGCTGTTTACCTGTAACATGTGAATGCTGTAAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090277.3 |
||
| 3UTR CCA 72 bp | TGGACTCATGAAATAGAGAAAACTTCTATCTGCTCATaGATAGAGGGTAATTATGTGGCAGTTTTTCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: WTHEIEKTSICS*IEGNYVAVFLS Trigger: AGACAGAAAAACTGCCACATAATTACCCTCTATCCATGAGCAGATAGAAGTTTTCTCTATTTCATGAGTCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090277.3 |
||
| 3UTR CCA 72 bp | ATTTACAACAAACTAAATGTCCTGTCATTTGTAGTATaGTTAGGTGTCTTCCTTTCAGAAAGTTGGGCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: IYNKLNVLSFVV*LGVFLSESWAL Trigger: GAGAGCCCAACTTTCTGAAAGGAAGACACCTAACCATACTACAAATGACAGGACATTTAGTTTGTTGTAAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229825.2 |
||
| 3UTR GCA 72 bp | GAAAACTGGACTCATGAAATAGAGAAAACTTCTATCTaGTCATGGATAGAGGGTAATTATGTGGCAGTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: ENWTHEIEKTSI*SWIEGNYVAVF Trigger: AAAAACTGCCACATAATTACCCTCTATCCATGAGCAGATAGAAGTTTTCTCTATTTCATGAGTCCAGTTTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090277.3 |
||
| 3UTR CAA 72 bp | GCCCAGTTCTGTTCCCATGATCTGGGTGCACCATGCTaGCTCTTCTTGTTTTCTCACACCATGGAATCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AQFCSHDLGAPC*LFLFSHTMESS Trigger: GCTGGATTCCATGGTGTGAGAAAACAAGAAGAGCAAGCATGGTGCACCCAGATCATGGGAACAGAACTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229121.2 |
||
| CDS-3UTR TCA 90 bp | CAGTCGATGCACCTGAAACTTACTGTGAAGGCAGACTATATTCAAGCCAGACAGCCTCAGAGGGCTGCTTaGGAAGGCTGTTCTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QSMHLKLTVKADYIQARQPQRAA*EGCSSA Trigger: TGCTGAAGAACAGCCTTCTCAAGCAGCCCTCTGAGG...CTGTCTGGCTTGAATATAGTCTGCCTTCACAGTAAGTTTCAGGTGCATCGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090277.3 |
||
| 3UTR CAA 72 bp | ATGTCACAGGCCTTCAGGGATGCATGGGGTGACACTTaGAGGAACAGATCTGGCCCCTTGATTTATGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: MSQAFRDAWGDT*RNRSGPLIYVV Trigger: CACAACATAAATCAAGGGGCCAGATCTGTTCCTCAAAGTGTCACCCCATGCATCCCTGAAGGCCTGTGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229825.2 |
||
| CDS-3UTR GCA 90 bp | CACCACATGGCATCTTCTGAGCTGAGAAGAACAGATGAACTTAATGTGGCTCCTTCCTCCTCAGAGGGCTaGTTGAGAAGGCTGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HHMASSELRRTDELNVAPSSSEG*LRRLFF Trigger: GAAGAACAGCCTTCTCAAGCAGCCCTCTGAGGAGGA...AGGAGCCACATTAAGTTCATCTGTTCTTCTCAGCTCAGAAGATGCCATGTGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090277.3 ENSMUST00000228998.2 |
||
| 3UTR CAA 72 bp | GCATGGGGTGACACTTTGAGGAACAGATCTGGCCCCTaGATTTATGTTGTGTTCAAAGTCACGTCCCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: AWGDTLRNRSGP*IYVVFKVTSHQ Trigger: CTGATGGGACGTGACTTTGAACACAACATAAATCAAGGGGCCAGATCTGTTCCTCAAAGTGTCACCCCATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229825.2 |
||
| CDS-3UTR TCA 90 bp | CTACAAAAGACAGCTTCCCATCATGGTCATGGTCCTGTGAGATGCACAGCCTGGTCTCCTCCTTTGAAATaGAGCCATCACCATTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LQKTASHHGHGPVRCTAWSPPLK*SHHHSD Trigger: ATCTGAATGGTGATGGCTTCATTTCAAAGGAGGAGA...CCAGGCTGTGCATCTCACAGGACCATGACCATGATGGGAAGCTGTCTTTTGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228998.2 |
||
| CDS-3UTR TCA 90 bp | GCAGTGACTTTCTCTCAGTGTAACTCCAATCTAGCAAGTGAAAGATCTGTATGCCCTCAGAGGGCTGCTTaGGAAGGCTGTTCTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AVTFSQCNSNLASERSVCPQRAA*EGCSSA Trigger: TGCTGAAGAACAGCCTTCTCAAGCAGCCCTCTGAGG...GCATACAGATCTTTCACTTGCTAGATTGGAGTTACACTGAGAGAAAGTCACTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229121.2 |
||
| CDS-3UTR TCA 90 bp | CATGCTTGCTCTTCTTGTTTTCTCACACCATGGAATCCAGCAGTCCCACTGGGATCTCCTCCTTTGAAATaGAGCCATCACCATTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: HACSSCFLTPWNPAVPLGSPPLK*SHHHSD Trigger: ATCTGAATGGTGATGGCTTCATTTCAAAGGAGGAGA...TCCCAGTGGGACTGCTGGATTCCATGGTGTGAGAAAACAAGAAGAGCAAGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229121.2 |
||
| CDS-3UTR GCA 90 bp | GAATACTTGGGCTTCAAATTCCATCTGGCTCTTTGGATCAGGCAGGCAAGGCCCGCATGGCATTCTTGCTaGAAATGCACACATTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EYLGFKFHLALWIRQARPAWHSC*KCTHFL Trigger: AAGAAAATGTGTGCATTTGCAGCAAGAATGCCATGC...GGGCCTTGCCTGCCTGATCCAAAGAGCCAGATGGAATTTGAAGCCCAAGTATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228998.2 |
||
| 3UTR CAA 72 bp | TGTGCTATAGTAAGAACTGAGAGAATCAGCTCATTCTaGTGTGACCCCTTGGTCAGTTTCCGTGAGGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: CAIVRTERISSF*CDPLVSFREAV Trigger: GACTGCCTCACGGAAACTGACCAAGGGGTCACACAAGAATGAGCTGATTCTCTCAGTTCTTACTATAGCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229825.2 |
||
| CDS-3UTR TCA 90 bp | TGTTCCCATGATCTGGGTGCACCATGCTTGCTCTTCTTGTTTTCTCACACCATGGAACATCTCCTCCTTTaGAATGAAGCCATCACCATT | + |
|
Preference number: 4 (lower is better) Translates to: CSHDLGAPCLLFLFSHTMEHLLL*NEAITI Trigger: AATGGTGATGGCTTCATTTCAAAGGAGGAGATGTTC...CATGGTGTGAGAAAACAAGAAGAGCAAGCATGGTGCACCCAGATCATGGGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229121.2 |
||
| CDS-3UTR TCA 90 bp | GAAATATCTTTAACAATGTTAACCTCTCTTGCCAAACCCAGCATATCTGAGGGTCCTCAGAGGGCTGCTTaGGAAGGCTGTTCTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EISLTMLTSLAKPSISEGPQRAA*EGCSSA Trigger: TGCTGAAGAACAGCCTTCTCAAGCAGCCCTCTGAGG...ACCCTCAGATATGCTGGGTTTGGCAAGAGAGGTTAACATTGTTAAAGATATTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090277.3 ENSMUST00000228998.2 |
||
| 3UTR CAA 72 bp | AGAACTGAGAGAATCAGCTCATTCTTGTGTGACCCCTaGGTCAGTTTCCGTGAGGCAGTCTTACAGTTATTT | + |
|
Preference number: 4 (lower is better) Translates to: RTERISSFLCDP*VSFREAVLQLF Trigger: AAATAACTGTAAGACTGCCTCACGGAAACTGACCAAGGGGTCACACAAGAATGAGCTGATTCTCTCAGTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229825.2 |
||
| CDS-3UTR TCA 90 bp | AAGAAACAGTCGATGCACCTGAAACTTACTGTGAAGGCAGACTATATTCAAGCCTCCATGAATCCACTCTaGTACGCTTATACAGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: KKQSMHLKLTVKADYIQASMNPL*YAYTAI Trigger: GATGGCTGTATAAGCGTATCAGAGTGGATTCATGGA...GGCTTGAATATAGTCTGCCTTCACAGTAAGTTTCAGGTGCATCGACTGTTTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090277.3 |
||
| CDS-3UTR TCA 90 bp | CAGTCGATGCACCTGAAACTTACTGTGAAGGCAGACTATATTCAAGCCAGACAGAACAGTGATAATCCATaGATCCACTCTGATACGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QSMHLKLTVKADYIQARQNSDNP*IHSDTL Trigger: AAGCGTATCAGAGTGGATTCATGGATTATCACTGTT...CTGTCTGGCTTGAATATAGTCTGCCTTCACAGTAAGTTTCAGGTGCATCGACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090277.3 |
||
| CDS-3UTR TCA 90 bp | GGAGATTCTCTTCTCTCACAGCCTTCTCATAGTCTACAAAAGACAGCTTCCCATGAACATCTCCTCCTTTaGAATGAAGCCATCACCATT | + |
|
Preference number: 4 (lower is better) Translates to: GDSLLSQPSHSLQKTASHEHLLL*NEAITI Trigger: AATGGTGATGGCTTCATTTCAAAGGAGGAGATGTTC...ATGGGAAGCTGTCTTTTGTAGACTATGAGAAGGCTGTGAGAGAAGAGAATCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228998.2 |
||
| CDS-3UTR GCA 90 bp | TACTTGGGCTTCAAATTCCATCTGGCTCTTTGGATCAGGCAGGCAAGGCCCAAAATTCCAAATGTCACATaGAAGATGTTCCGAAATACA | + |
|
Preference number: 4 (lower is better) Translates to: YLGFKFHLALWIRQARPKIPNVT*KMFRNT Trigger: TGTATTTCGGAACATCTTGCATGTGACATTTGGAAT...TTTGGGCCTTGCCTGCCTGATCCAAAGAGCCAGATGGAATTTGAAGCCCAAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228998.2 |
||
| CDS-3UTR GCA 90 bp | CTGCTCTTCAGCAAATACAGACCATCTCCTCTGTGTCAGACCACAGGAAACAGCATTCCAAATGTCACATaGAAGATGTTCCGAAATACA | + |
|
Preference number: 4 (lower is better) Translates to: LLFSKYRPSPLCQTTGNSIPNVT*KMFRNT Trigger: TGTATTTCGGAACATCTTGCATGTGACATTTGGAAT...GCTGTTTCCTGTGGTCTGACACAGAGGAGATGGTCTGTATTTGCTGAAGAGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229825.2 |
||
| CDS-3UTR GCA 90 bp | CACCACATGGCATCTTCTGAGCTGAGAAGAACAGATGAACTTAATGTGGCTCCTAGAGCATGGCATTCTTaGTGCAAATGCACACATTTT | + |
|
Preference number: 4 (lower is better) Translates to: HHMASSELRRTDELNVAPRAWHS*CKCTHF Trigger: AAAATGTGTGCATTTGCAGCAAGAATGCCATGCTCT...AGGAGCCACATTAAGTTCATCTGTTCTTCTCAGCTCAGAAGATGCCATGTGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228998.2 |
||
| CDS-3UTR CCA 90 bp | CCACCATTACACAGAAAGGAAGCTGTGTCAGTCAGGATGTACTGGGTTTCATTTGACAGCTTCCCATCATaGTCATGGTCCATTTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: PPLHRKEAVSVRMYWVSFDSFPS*SWSIFL Trigger: TAAGAAAATGGACCATGACCATGATGGGAAGCTGTC...AAATGAAACCCAGTACATCCTGACTGACACAGCTTCCTTTCTGTGTAATGGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090277.3 |
||
| CDS-3UTR CCA 90 bp | CACCACATGGCATCTTCTGAGCTGAGAAGAACAGATGAACTTAATGTGGCTCCTGGATCTTTGAATACTTaGGCTTCAAATTCCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HHMASSELRRTDELNVAPGSLNT*ASNSIW Trigger: CCAGATGGAATTTGAAGCCCAAGTATTCAAAGATCC...AGGAGCCACATTAAGTTCATCTGTTCTTCTCAGCTCAGAAGATGCCATGTGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090277.3 |
||
| 3UTR CAA 72 bp | TGCTATGGTGGCTATGAAAGTGTGAGTGACAAATCTTaGCCCTCCAATGTTTATGAGCTGTTGAAGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CYGGYESVSDKS*PSNVYELLKQS Trigger: GCTTTGCTTCAACAGCTCATAAACATTGGAGGGCAAAGATTTGTCACTCACACTTTCATAGCCACCATAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090277.3 |
||
| CDS-3UTR TCA 90 bp | GAAATATCTTTAACAATGTTAACCTCTCTTGCCAAACCCAGCATATCTGAGGGTTCCATGAATCCACTCTaGTACGCTTATACAGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: EISLTMLTSLAKPSISEGSMNPL*YAYTAI Trigger: GATGGCTGTATAAGCGTATCAGAGTGGATTCATGGA...ACCCTCAGATATGCTGGGTTTGGCAAGAGAGGTTAACATTGTTAAAGATATTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090277.3 ENSMUST00000228998.2 |
||
| CDS-3UTR TCA 90 bp | CTTAAGAAGTTCAAATTTGTTTCCTTCTTCCAGGCACTTGTCTCCATAGTTGTGTCCATGAATCCACTCTaGTACGCTTATACAGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: LKKFKFVSFFQALVSIVVSMNPL*YAYTAI Trigger: GATGGCTGTATAAGCGTATCAGAGTGGATTCATGGA...CACAACTATGGAGACAAGTGCCTGGAAGAAGGAAACAAATTTGAACTTCTTAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229121.2 |
||
| CDS-3UTR TCA 90 bp | GCATCTTCTGAGCTGAGAAGAACAGATGAACTTAATGTGGCTCCTTTTGTACTTTCTCCTCCTTTGAAATaGAGCCATCACCATTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ASSELRRTDELNVAPFVLSPPLK*SHHHSD Trigger: ATCTGAATGGTGATGGCTTCATTTCAAAGGAGGAGA...AAGTACAAAAGGAGCCACATTAAGTTCATCTGTTCTTCTCAGCTCAGAAGATGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090277.3 ENSMUST00000228998.2 |
||
| CDS-3UTR GCA 90 bp | GACTTAGAAATGTATCTCAAGATGAGAGGACAATATCCGGAGCCCTTGACGTCCATTCCAAATGTCACATaGAAGATGTTCCGAAATACA | + |
|
Preference number: 4 (lower is better) Translates to: DLEMYLKMRGQYPEPLTSIPNVT*KMFRNT Trigger: TGTATTTCGGAACATCTTGCATGTGACATTTGGAAT...GGACGTCAAGGGCTCCGGATATTGTCCTCTCATCTTGAGATACATTTCTAAGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229121.2 |
||
| CDS-3UTR TCA 90 bp | TCATTTATTCAAAGGAAGAAACAGTCGATGCACCTGAAACTTACTGTGAAGGCAGAACATCTCCTCCTTTaGAATGAAGCCATCACCATT | + |
|
Preference number: 4 (lower is better) Translates to: SFIQRKKQSMHLKLTVKAEHLLL*NEAITI Trigger: AATGGTGATGGCTTCATTTCAAAGGAGGAGATGTTC...TGCCTTCACAGTAAGTTTCAGGTGCATCGACTGTTTCTTCCTTTGAATAAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090277.3 |
||
| CDS-3UTR CCA 90 bp | ATAGAGAAAACTTCTATCTGCTCATGGATAGAGGGTAATTATGTGGCAGTTTTTGCTTCAAATTCCATCTaGCTCTTTGGATCAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IEKTSICSWIEGNYVAVFASNSI*LFGSGR Trigger: CCTGCCTGATCCAAAGAGCCAGATGGAATTTGAAGC...AAAAACTGCCACATAATTACCCTCTATCCATGAGCAGATAGAAGTTTTCTCTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090277.3 |
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| 3UTR CAA 72 bp | CCTCAAGCAGAAATGTCCTCCACAGTCTCAATTATATaGCCCCTTTCACCTTTGACAGAAGAATTTAATCCT | + |
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Preference number: 4 (lower is better) Translates to: PQAEMSSTVSII*PLSPLTEEFNP Trigger: AGGATTAAATTCTTCTGTCAAAGGTGAAAGGGGCAATATAATTGAGACTGTGGAGGACATTTCTGCTTGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229121.2 |
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| CDS-3UTR TCA 90 bp | TACAACAAACTAAATGTCCTGTCATTTGTAGTATGGTTAGGTGTCTTCCTTTCATCCATGAATCCACTCTaGTACGCTTATACAGCCATC | + |
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Preference number: 4 (lower is better) Translates to: YNKLNVLSFVVWLGVFLSSMNPL*YAYTAI Trigger: GATGGCTGTATAAGCGTATCAGAGTGGATTCATGGA...TGAAAGGAAGACACCTAACCATACTACAAATGACAGGACATTTAGTTTGTTGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229825.2 |
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| 3UTR CAA 72 bp | TCCTCCACAGTCTCAATTATATTGCCCCTTTCACCTTaGACAGAAGAATTTAATCCTTCCTTGTCTTCTAAG | + |
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Preference number: 4 (lower is better) Translates to: SSTVSIILPLSP*TEEFNPSLSSK Trigger: CTTAGAAGACAAGGAAGGATTAAATTCTTCTGTCAAAGGTGAAAGGGGCAATATAATTGAGACTGTGGAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229121.2 |
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| CDS-3UTR CCA 90 bp | AGCAGTACATATGCTTATTTTCAGTTCTTGGCTCTTCATGGTAATTACGTGATTGACAGCTTCCCATCATaGTCATGGTCCATTTTCTTA | + |
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Preference number: 4 (lower is better) Translates to: SSTYAYFQFLALHGNYVIDSFPS*SWSIFL Trigger: TAAGAAAATGGACCATGACCATGATGGGAAGCTGTC...AATCACGTAATTACCATGAAGAGCCAAGAACTGAAAATAAGCATATGTACTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229121.2 |
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| CDS-3UTR GCA 90 bp | GAAATATCTTTAACAATGTTAACCTCTCTTGCCAAACCCAGCATATCTGAGGGTATTCCAAATGTCACATaGAAGATGTTCCGAAATACA | + |
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Preference number: 4 (lower is better) Translates to: EISLTMLTSLAKPSISEGIPNVT*KMFRNT Trigger: TGTATTTCGGAACATCTTGCATGTGACATTTGGAAT...ACCCTCAGATATGCTGGGTTTGGCAAGAGAGGTTAACATTGTTAAAGATATTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090277.3 ENSMUST00000228998.2 |
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| 3UTR CAA 72 bp | AGTTTTTCTGTCTCTAAATCCTATCTGAAATATTTATaGAGGGCCAATTACATGCTAACTGCTATGGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: SFSVSKSYLKYL*RANYMLTAMVA Trigger: AGCCACCATAGCAGTTAGCATGTAATTGGCCCTCAATAAATATTTCAGATAGGATTTAGAGACAGAAAAACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090277.3 |
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| CDS-3UTR CAA 90 bp | GAATACTTGGGCTTCAAATTCCATCTGGCTCTTTGGATCAGGCAGGCAAGGCCCCTTATACAGCCATCATaGTCTTTATCAAAGCCTCGA | + |
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Preference number: 5 (lower is better) Translates to: EYLGFKFHLALWIRQARPLIQPS*SLSKPR Trigger: TCGAGGCTTTGATAAAGACAATGATGGCTGTATAAG...GGGCCTTGCCTGCCTGATCCAAAGAGCCAGATGGAATTTGAAGCCCAAGTATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228998.2 |
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| CDS TCA 90 bp | ATGTCACATGCAAGATGTTCCGAAATACATTACGATCTAGTCCGGTaGCTACTCCTGGCCTCTCTGCTACGTCTCCCACCAAATTATAGA | + |
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Preference number: 5 (lower is better) Translates to: MSHARCSEIHYDLVR*LLLASLLRLPPNYR Trigger: TCTATAATTTGGTGGGAGACGTAGCAGAGAGGCCAGGAGTAGTCACCGGACTAGATCGTAATGTATTTCGGAACATCTTGCATGTGACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090277.3 ENSMUST00000228998.2 ENSMUST00000229121.2 ENSMUST00000229825.2 |
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| CDS-3UTR CAA 90 bp | GCACCATGCTTGCTCTTCTTGTTTTCTCACACCATGGAATCCAGCAGTCCCACTCTTATACAGCCATCATaGTCTTTATCAAAGCCTCGA | + |
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Preference number: 5 (lower is better) Translates to: APCLLFLFSHTMESSSPTLIQPS*SLSKPR Trigger: TCGAGGCTTTGATAAAGACAATGATGGCTGTATAAG...AGTGGGACTGCTGGATTCCATGGTGTGAGAAAACAAGAAGAGCAAGCATGGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229121.2 |
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| CDS-3UTR CAA 90 bp | CACCACATGGCATCTTCTGAGCTGAGAAGAACAGATGAACTTAATGTGGCTCCTCTTATACAGCCATCATaGTCTTTATCAAAGCCTCGA | + |
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Preference number: 5 (lower is better) Translates to: HHMASSELRRTDELNVAPLIQPS*SLSKPR Trigger: TCGAGGCTTTGATAAAGACAATGATGGCTGTATAAG...AGGAGCCACATTAAGTTCATCTGTTCTTCTCAGCTCAGAAGATGCCATGTGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090277.3 ENSMUST00000228998.2 |
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| CDS-3UTR CAA 90 bp | GCACTGAATAGGGCTGGATATGCTTTCATGTATCTCTTTGGATCAGGCAGGCAACTTATACAGCCATCATaGTCTTTATCAAAGCCTCGA | + |
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Preference number: 5 (lower is better) Translates to: ALNRAGYAFMYLFGSGRQLIQPS*SLSKPR Trigger: TCGAGGCTTTGATAAAGACAATGATGGCTGTATAAG...TTGCCTGCCTGATCCAAAGAGATACATGAAAGCATATCCAGCCCTATTCAGTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229825.2 |
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| CDS-3UTR CAA 90 bp | CACCACATGGCATCTTCTGAGCTGAGAAGAACAGATGAACTTAATGTGGCTCCTTGGATCTTTGAATACTaGGGCTTCAAATTCCATCTG | + |
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Preference number: 5 (lower is better) Translates to: HHMASSELRRTDELNVAPWIFEY*GFKFHL Trigger: CAGATGGAATTTGAAGCCCAAGTATTCAAAGATCCA...AGGAGCCACATTAAGTTCATCTGTTCTTCTCAGCTCAGAAGATGCCATGTGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090277.3 |
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| CDS GCA 90 bp | AATACTCTGTCCATAATCATGTCATCTGTCATTCCAAATGTCACATaGAAGATGTTCCGAAATACATTACGATCTAGTCCGGTGACTACT | + |
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Preference number: 5 (lower is better) Translates to: NTLSIIMSSVIPNVT*KMFRNTLRSSPVTT Trigger: AGTAGTCACCGGACTAGATCGTAATGTATTTCGGAACATCTTGCATGTGACATTTGGAATGACAGATGACATGATTATGGACAGAGTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090277.3 ENSMUST00000228998.2 ENSMUST00000229121.2 ENSMUST00000229825.2 |
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| CDS TCA 72 bp | GCAAGATGTTCCGAAATACATTACGATCTAGTCCGGTaGCTACTCCTGGCCTCTCTGCTACGTCTCCCACCA | + |
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Preference number: 6 (lower is better) Translates to: ARCSEIHYDLVR*LLLASLLRLPP Trigger: TGGTGGGAGACGTAGCAGAGAGGCCAGGAGTAGTCACCGGACTAGATCGTAATGTATTTCGGAACATCTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090277.3 ENSMUST00000228998.2 ENSMUST00000229121.2 ENSMUST00000229825.2 |
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| CDS CAA 90 bp | ACCAAATCTTTAATCCCTTCATCAGGGTCCTCCTCAGAGGGCTGCTaGAGAAGGCTGTTCTTCAGCATGTGGAACATCTCCTCCTTTGAA | + |
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Preference number: 6 (lower is better) Translates to: TKSLIPSSGSSSEGC*RRLFFSMWNISSFE Trigger: TTCAAAGGAGGAGATGTTCCACATGCTGAAGAACAGCCTTCTCAAGCAGCCCTCTGAGGAGGACCCTGATGAAGGGATTAAAGATTTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090277.3 ENSMUST00000228998.2 ENSMUST00000229121.2 |
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| CDS TCA 72 bp | TGTTCTTCAGCATGTGGAACATCTCCTCCTTTGAAATaGAGCCATCACCATTCAGATCAAACACTTCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: CSSACGTSPPLK*SHHHSDQTLQS Trigger: GCTTTGAAGTGTTTGATCTGAATGGTGATGGCTTCATTTCAAAGGAGGAGATGTTCCACATGCTGAAGAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090277.3 ENSMUST00000228998.2 ENSMUST00000229121.2 |
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| CDS TCA 72 bp | TCATCTAAAGTCCCTCGAAGAAACAGTGATAATCCATaGATCCACTCTGATACGCTTATACAGCCATCATTG | + |
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Preference number: 6 (lower is better) Translates to: SSKVPRRNSDNP*IHSDTLIQPSL Trigger: CAATGATGGCTGTATAAGCGTATCAGAGTGGATTCATGGATTATCACTGTTTCTTCGAGGGACTTTAGATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090277.3 ENSMUST00000228998.2 ENSMUST00000229121.2 ENSMUST00000229825.2 |
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