Pregenerated sensors for EEPD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036611Ensembl transcript IDs: ENSMUST00000040677.6
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCAGTTCCAGCCAGCTCCGCCATGATGCCCACCATAGCCAGTGCCTaGCAGGCTCCCCTCAGGCCAGGTTCTAAAGTGTTCACAAAGTGG | + |
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Preference number: 1 (lower is better) Translates to: AVPASSAMMPTIASA*QAPLRPGSKVFTKW Trigger: CCACTTTGTGAACACTTTAGAACCTGGCCTGAGGGGAGCCTGTCAGGCACTGGCTATGGTGGGCATCATGGCGGAGCTGGCTGGAACTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| 3UTR TCA 90 bp | ATCCTGGTGAGGCAGAAACGAGAGCTGTGGCACTGCTTGTCAGCCTaGGCCACTGTTCCCATCTGCACTTCACTCCTCTGTTACTGTTCT | + |
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Preference number: 1 (lower is better) Translates to: ILVRQKRELWHCLSA*ATVPICTSLLCYCS Trigger: AGAACAGTAACAGAGGAGTGAAGTGCAGATGGGAACAGTGGCTCAGGCTGACAAGCAGTGCCACAGCTCTCGTTTCTGCCTCACCAGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| 3UTR TCA 90 bp | GCATTCATCACAGTTAAAAGCTTCCTGAAATTTGTCGGTAGAACATaGCATCCTGGTGAGGCAGAAACGAGAGCTGTGGCACTGCTTGTC | + |
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Preference number: 1 (lower is better) Translates to: AFITVKSFLKFVGRT*HPGEAETRAVALLV Trigger: GACAAGCAGTGCCACAGCTCTCGTTTCTGCCTCACCAGGATGTCATGTTCTACCGACAAATTTCAGGAAGCTTTTAACTGTGATGAATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| 3UTR-3UTR CCA 90 bp | GAAACGAGAGCTGTGGCACTGCTTGTCAGCCTGAGCCACTGTTCCCATCTGCACATGATTCACAGGCCCTaGATCTTCTCACCCTGTAGT | + |
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Preference number: 2 (lower is better) Translates to: ETRAVALLVSLSHCSHLHMIHRP*IFSPCS Trigger: ACTACAGGGTGAGAAGATCCAGGGCCTGTGAATCAT...GTGCAGATGGGAACAGTGGCTCAGGCTGACAAGCAGTGCCACAGCTCTCGTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| 3UTR-3UTR CCA 90 bp | TGTTCTCATGCTGCTAAACAATCAGCCAGCAGTGCAGCCCCCATCCCAAGCCCGAAAGTGTTCACAAAGTaGACAGTGGTCCAGGGACCA | + |
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Preference number: 2 (lower is better) Translates to: CSHAAKQSASSAAPIPSPKVFTK*TVVQGP Trigger: TGGTCCCTGGACCACTGTCCACTTTGTGAACACTTT...CGGGCTTGGGATGGGGGCTGCACTGCTGGCTGATTGTTTAGCAGCATGAGAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| 3UTR-3UTR TCA 90 bp | TTGAGAAGTGCATTCATCACAGTTAAAAGCTTCCTGAAATTTGTCGGTAGAACACACTGCTTGTCAGCCTaGGCCACTGTTCCCATCTGC | + |
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Preference number: 2 (lower is better) Translates to: LRSAFITVKSFLKFVGRTHCLSA*ATVPIC Trigger: GCAGATGGGAACAGTGGCTCAGGCTGACAAGCAGTG...TGTTCTACCGACAAATTTCAGGAAGCTTTTAACTGTGATGAATGCACTTCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| 3UTR TCA 72 bp | GCCAGCTCCGCCATGATGCCCACCATAGCCAGTGCCTaGCAGGCTCCCCTCAGGCCAGGTTCTAAAGTGTTC | + |
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Preference number: 3 (lower is better) Translates to: ASSAMMPTIASA*QAPLRPGSKVF Trigger: GAACACTTTAGAACCTGGCCTGAGGGGAGCCTGTCAGGCACTGGCTATGGTGGGCATCATGGCGGAGCTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR CCA 90 bp | CAGCTCCGCCATGATGCCCACCATAGCCAGTGCCTGACAGGCTCCCCTCAGGCCGCTTCTCAGCAACAATaGACCTCCAGCATCCTCGGG | + |
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Preference number: 4 (lower is better) Translates to: QLRHDAHHSQCLTGSPQAASQQQ*TSSILG Trigger: CCCGAGGATGCTGGAGGTCCATTGTTGCTGAGAAGC...GGCCTGAGGGGAGCCTGTCAGGCACTGGCTATGGTGGGCATCATGGCGGAGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR GCA 90 bp | CAGCTCCGCCATGATGCCCACCATAGCCAGTGCCTGACAGGCTCCCCTCAGGCCTTTCCAGAAGCGTCATaGACACCACCTCTCGAACCC | + |
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Preference number: 4 (lower is better) Translates to: QLRHDAHHSQCLTGSPQAFPEAS*TPPLEP Trigger: GGGTTCGAGAGGTGGTGTGCATGACGCTTCTGGAAA...GGCCTGAGGGGAGCCTGTCAGGCACTGGCTATGGTGGGCATCATGGCGGAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR GCA 90 bp | CGTCGCAGTTCCAGCCAGCTCCGCCATGATGCCCACCATAGCCAGTGCCTGACAGGGCCTGGACCTCTCTaGGAACACCTGGTGTCTTAT | + |
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Preference number: 4 (lower is better) Translates to: RRSSSQLRHDAHHSQCLTGPGPL*EHLVSY Trigger: ATAAGACACCAGGTGTTCGCAGAGAGGTCCAGGCCC...TGTCAGGCACTGGCTATGGTGGGCATCATGGCGGAGCTGGCTGGAACTGCGACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR TCA 90 bp | AGTTCCAGCCAGCTCCGCCATGATGCCCACCATAGCCAGTGCCTGACAGGCTCCGAACTTGCGGTTATGTaGCAGGTCCGAGGGATCTCT | + |
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Preference number: 4 (lower is better) Translates to: SSSQLRHDAHHSQCLTGSELAVM*QVRGIS Trigger: AGAGATCCCTCGGACCTGTCACATAACCGCAAGTTC...GGAGCCTGTCAGGCACTGGCTATGGTGGGCATCATGGCGGAGCTGGCTGGAACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR TCA 90 bp | CAGCAGTGCAGCCCCCATCCCAAGCCCGAACTCAGCTACATAGCGTCAAGACGTCGGACACTCATGAGCTaGGCAAGGGTGGCTGTGTTG | + |
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Preference number: 4 (lower is better) Translates to: QQCSPHPKPELSYIASRRRTLMS*ARVAVL Trigger: CAACACAGCCACCCTTGCTCAGCTCATGAGTGTCCG...ACGTCTTGACGCTATGTAGCTGAGTTCGGGCTTGGGATGGGGGCTGCACTGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR TCA 90 bp | AGTTCCAGCCAGCTCCGCCATGATGCCCACCATAGCCAGTGCCTGACAGGCTCCACAGACTTGGAGCCTTaGGGATTCCTGGTGCTGATG | + |
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Preference number: 4 (lower is better) Translates to: SSSQLRHDAHHSQCLTGSTDLEP*GFLVLM Trigger: CATCAGCACCAGGAATCCTCAAGGCTCCAAGTCTGT...GGAGCCTGTCAGGCACTGGCTATGGTGGGCATCATGGCGGAGCTGGCTGGAACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR GCA 90 bp | CAGCTCCGCCATGATGCCCACCATAGCCAGTGCCTGACAGGCTCCCCTCAGGCCGGATATCGTAGTCATTaGTATCTGGCCCTTGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: QLRHDAHHSQCLTGSPQAGYRSH*YLALGQ Trigger: TTGGCCAAGGGCCAGATAGCAATGACTACGATATCC...GGCCTGAGGGGAGCCTGTCAGGCACTGGCTATGGTGGGCATCATGGCGGAGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR CCA 90 bp | GAAACGAGAGCTGTGGCACTGCTTGTCAGCCTGAGCCACTGTTCCCATCTGCACCCCGCCTCAGGGAACTaGGAGAGTGCTGTGCAGAGT | + |
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Preference number: 4 (lower is better) Translates to: ETRAVALLVSLSHCSHLHPASGN*ESAVQS Trigger: ACTCTGCACAGCACTCTCCCAGTTCCCTGAGGCGGG...GTGCAGATGGGAACAGTGGCTCAGGCTGACAAGCAGTGCCACAGCTCTCGTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR CCA 90 bp | GAAACGAGAGCTGTGGCACTGCTTGTCAGCCTGAGCCACTGTTCCCATCTGCACAGACCCCCATTGGTGTaGGTTGATGGGGGCCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: ETRAVALLVSLSHCSHLHRPPLV*VDGGLD Trigger: GTCCAGGCCCCCATCAACCCACACCAATGGGGGTCT...GTGCAGATGGGAACAGTGGCTCAGGCTGACAAGCAGTGCCACAGCTCTCGTTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR TCA 90 bp | AGTTCCAGCCAGCTCCGCCATGATGCCCACCATAGCCAGTGCCTGACAGGCTCCCCAGGAAGGCTGCATTaGTTCCATCCATTCTCACCA | + |
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Preference number: 4 (lower is better) Translates to: SSSQLRHDAHHSQCLTGSPGRLH*FHPFSP Trigger: TGGTGAGAATGGATGGAATCAATGCAGCCTTCCTGG...GGAGCCTGTCAGGCACTGGCTATGGTGGGCATCATGGCGGAGCTGGCTGGAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR CCA 90 bp | TGTTCTCATGCTGCTAAACAATCAGCCAGCAGTGCAGCCCCCATCCCAAGCCCGGAACCCCCGGGTTATTaGCCTTCTCCACAGAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: CSHAAKQSASSAAPIPSPEPPGY*PSPQSS Trigger: GCTGCTCTGTGGAGAAGGCCAATAACCCGGGGGTTC...CGGGCTTGGGATGGGGGCTGCACTGCTGGCTGATTGTTTAGCAGCATGAGAACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR TCA 90 bp | CATCCTGGTGAGGCAGAAACGAGAGCTGTGGCACTGCTTGTCAGCCTGAGCCACCATTACTTCCCACCTTaGATCTGGCGAGGAAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: HPGEAETRAVALLVSLSHHYFPP*IWRGKG Trigger: GCCCTTTCCTCGCCAGATTCAAGGTGGGAAGTAATG...GTGGCTCAGGCTGACAAGCAGTGCCACAGCTCTCGTTTCTGCCTCACCAGGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR GCA 90 bp | CATCCTGGTGAGGCAGAAACGAGAGCTGTGGCACTGCTTGTCAGCCTGAGCCACACTGGGAGAGTGCTGTaGAGAGTTACCCTTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: HPGEAETRAVALLVSLSHTGRVL*RVTLAA Trigger: AGCAGCAAGGGTAACTCTGCACAGCACTCTCCCAGT...GTGGCTCAGGCTGACAAGCAGTGCCACAGCTCTCGTTTCTGCCTCACCAGGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR CCA 90 bp | GAGGCAGAAACGAGAGCTGTGGCACTGCTTGTCAGCCTGAGCCACTGTTCCCATTCCACTTGCGGATGTTaGGCAGGATCGGCTGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: EAETRAVALLVSLSHCSHSTCGC*AGSAGS Trigger: TGAACCAGCCGATCCTGCCCAACATCCGCAAGTGGA...ATGGGAACAGTGGCTCAGGCTGACAAGCAGTGCCACAGCTCTCGTTTCTGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR CCA 90 bp | GAAACGAGAGCTGTGGCACTGCTTGTCAGCCTGAGCCACTGTTCCCATCTGCACGCCAGGGCTGTCAGCTaGAGGTTAACCAGGGTTAAG | + |
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Preference number: 4 (lower is better) Translates to: ETRAVALLVSLSHCSHLHARAVS*RLTRVK Trigger: CTTAACCCTGGTTAACCTCCAGCTGACAGCCCTGGC...GTGCAGATGGGAACAGTGGCTCAGGCTGACAAGCAGTGCCACAGCTCTCGTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR TCA 90 bp | CATCCTGGTGAGGCAGAAACGAGAGCTGTGGCACTGCTTGTCAGCCTGAGCCACGAATCCAAGGGTTTGTaGGCCCTTCTCTCACAACAG | + |
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Preference number: 4 (lower is better) Translates to: HPGEAETRAVALLVSLSHESKGL*ALLSQQ Trigger: CTGTTGTGAGAGAAGGGCTCACAAACCCTTGGATTC...GTGGCTCAGGCTGACAAGCAGTGCCACAGCTCTCGTTTCTGCCTCACCAGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR TCA 90 bp | GAGGCAGAAACGAGAGCTGTGGCACTGCTTGTCAGCCTGAGCCACTGTTCCCATCACTTGGCTCTAAGGTaGCTCCATTGCCATTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: EAETRAVALLVSLSHCSHHLALR*LHCHSW Trigger: CCAGGAATGGCAATGGAGTCACCTTAGAGCCAAGTG...ATGGGAACAGTGGCTCAGGCTGACAAGCAGTGCCACAGCTCTCGTTTCTGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR GCA 90 bp | ACCAAGACTAAGGTCCTCAGAATGATGATTCACAGGCCCTGGATCTTCTCACCCGATGCTTCGGGCCACTaGACGTGTCACCCCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: TKTKVLRMMIHRPWIFSPDASGH*TCHPRQ Trigger: CTGCCTGGGGTGACACGTGCAGTGGCCCGAAGCATC...GGGTGAGAAGATCCAGGGCCTGTGAATCATCATTCTGAGGACCTTAGTCTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR GCA 90 bp | CGTCGCAGTTCCAGCCAGCTCCGCCATGATGCCCACCATAGCCAGTGCCTGACACAGAGTTACCCTTGCTaGTCACACAGATCTCAAACT | + |
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Preference number: 4 (lower is better) Translates to: RRSSSQLRHDAHHSQCLTQSYPC*SHRSQT Trigger: AGTTTGAGATCTGTGTGAGCAGCAAGGGTAACTCTG...TGTCAGGCACTGGCTATGGTGGGCATCATGGCGGAGCTGGCTGGAACTGCGACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR GCA 90 bp | AAGGTCCTCAGAATGATGATTCACAGGCCCTGGATCTTCTCACCCTGTAGTGCCGGGACCCCTTCCACTTaGGGATGTTGGGCAGGATCG | + |
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Preference number: 4 (lower is better) Translates to: KVLRMMIHRPWIFSPCSAGTPST*GCWAGS Trigger: CGATCCTGCCCAACATCCGCAAGTGGAAGGGGTCCC...GGCACTACAGGGTGAGAAGATCCAGGGCCTGTGAATCATCATTCTGAGGACCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR CCA 90 bp | CATCCTGGTGAGGCAGAAACGAGAGCTGTGGCACTGCTTGTCAGCCTGAGCCACGTAGTCATTGCTATCTaGCCCTTGGCCAAAATCCCC | + |
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Preference number: 4 (lower is better) Translates to: HPGEAETRAVALLVSLSHVVIAI*PLAKIP Trigger: GGGGATTTTGGCCAAGGGCCAGATAGCAATGACTAC...GTGGCTCAGGCTGACAAGCAGTGCCACAGCTCTCGTTTCTGCCTCACCAGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR TCA 90 bp | AAGGTCCTCAGAATGATGATTCACAGGCCCTGGATCTTCTCACCCTGTAGTGCCGGGCCCTTCTGGAGCTaGTTGGAAGGCTTCTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: KVLRMMIHRPWIFSPCSAGPFWS*LEGFSA Trigger: TGCTGAGAAGCCTTCCAATCAGCTCCAGAAGGGCCC...GGCACTACAGGGTGAGAAGATCCAGGGCCTGTGAATCATCATTCTGAGGACCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR GCA 90 bp | TGTTCTCATGCTGCTAAACAATCAGCCAGCAGTGCAGCCCCCATCCCAAGCCCGTGGGGACTTCCTTCTTaGTCCAGTCCTTTTCCATGT | + |
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Preference number: 4 (lower is better) Translates to: CSHAAKQSASSAAPIPSPWGLPS*SSPFPC Trigger: ACATGGAAAAGGACTGGAGCAAGAAGGAAGTCCCCA...CGGGCTTGGGATGGGGGCTGCACTGCTGGCTGATTGTTTAGCAGCATGAGAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR TCA 90 bp | CCAGGTTCTAAAGTGTTCACAAAGTGGACAGTGGTCCAGGGACCAAGACTAAGGGATGTGGGACTGGGATaGGGCTTGGCAGTGAAGGTA | + |
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Preference number: 4 (lower is better) Translates to: PGSKVFTKWTVVQGPRLRDVGLG*GLAVKV Trigger: TACCTTCACTGCCAAGCCTCATCCCAGTCCCACATC...CCTTAGTCTTGGTCCCTGGACCACTGTCCACTTTGTGAACACTTTAGAACCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR GCA 90 bp | CTCTGTTACTGTTCTCATGCTGCTAAACAATCAGCCAGCAGTGCAGCCCCCATCAGGGAACTGGGAGAGTaGTGTGCAGAGTTACCCTTG | + |
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Preference number: 4 (lower is better) Translates to: LCYCSHAAKQSASSAAPIRELGE*CAELPL Trigger: CAAGGGTAACTCTGCACAGCACTCTCCCAGTTCCCT...GATGGGGGCTGCACTGCTGGCTGATTGTTTAGCAGCATGAGAACAGTAACAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR TCA 90 bp | ATGATTCACAGGCCCTGGATCTTCTCACCCTGTAGTGCCATCTCCATCCTATGCCCTCAGTGGCAGTGTTaGTATTTAGCCGCTCCTGAT | + |
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Preference number: 4 (lower is better) Translates to: MIHRPWIFSPCSAISILCPQWQC*YLAAPD Trigger: ATCAGGAGCGGCTAAATATCAACACTGCCACTGAGG...GCATAGGATGGAGATGGCACTACAGGGTGAGAAGATCCAGGGCCTGTGAATCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR TCA 90 bp | ATGATTCACAGGCCCTGGATCTTCTCACCCTGTAGTGCCATCTCCATCCTATGCGCCGGGACTAGGTGGTaGAATTTTTCTCTCCTTAGG | + |
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Preference number: 4 (lower is better) Translates to: MIHRPWIFSPCSAISILCAGTRW*NFSLLR Trigger: CCTAAGGAGAGAAAAATTTCACCACCTAGTCCCGGC...GCATAGGATGGAGATGGCACTACAGGGTGAGAAGATCCAGGGCCTGTGAATCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR CCA 90 bp | AAGGTCCTCAGAATGATGATTCACAGGCCCTGGATCTTCTCACCCTGTAGTGCCCCTTTCAGGGTTTCCTaGAGGGTTAGTGCAAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: KVLRMMIHRPWIFSPCSAPFRVS*RVSAKF Trigger: GAACTTTGCACTAACCCTCCAGGAAACCCTGAAAGG...GGCACTACAGGGTGAGAAGATCCAGGGCCTGTGAATCATCATTCTGAGGACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR CCA 90 bp | ACCAAGACTAAGGTCCTCAGAATGATGATTCACAGGCCCTGGATCTTCTCACCCTGTTGTCCACAGACTTaGAGCCTTGAGGATTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: TKTKVLRMMIHRPWIFSPCCPQT*SLEDSW Trigger: CCAGGAATCCTCAAGGCTCCAAGTCTGTGGACAACA...GGGTGAGAAGATCCAGGGCCTGTGAATCATCATTCTGAGGACCTTAGTCTTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR CCA 90 bp | ATGATTCACAGGCCCTGGATCTTCTCACCCTGTAGTGCCATCTCCATCCTATGCCCAGGACCAGTTATCTaGAATCCAAGGGTTTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: MIHRPWIFSPCSAISILCPGPVI*NPRVCE Trigger: CTCACAAACCCTTGGATTCCAGATAACTGGTCCTGG...GCATAGGATGGAGATGGCACTACAGGGTGAGAAGATCCAGGGCCTGTGAATCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR TCA 90 bp | CCAGGTTCTAAAGTGTTCACAAAGTGGACAGTGGTCCAGGGACCAAGACTAAGGCGGTGGCCATCACTGTaGTTCTTGCTTGAATTCTCA | + |
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Preference number: 4 (lower is better) Translates to: PGSKVFTKWTVVQGPRLRRWPSL*FLLEFS Trigger: TGAGAATTCAAGCAAGAATCACAGTGATGGCCACCG...CCTTAGTCTTGGTCCCTGGACCACTGTCCACTTTGTGAACACTTTAGAACCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR TCA 90 bp | AAGGTCCTCAGAATGATGATTCACAGGCCCTGGATCTTCTCACCCTGTAGTGCCCAGCCCAGTGACCTGTaGACACTTTCTTTAAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: KVLRMMIHRPWIFSPCSAQPSDL*TLSLSF Trigger: AAAGCTTAAAGAAAGTGTTCACAGGTCACTGGGCTG...GGCACTACAGGGTGAGAAGATCCAGGGCCTGTGAATCATCATTCTGAGGACCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR GCA 90 bp | CACTCCTCTGTTACTGTTCTCATGCTGCTAAACAATCAGCCAGCAGTGCAGCCCTCTGTCCAGGAAGGCTaGATTGATTCCATCCATTCT | + |
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Preference number: 4 (lower is better) Translates to: HSSVTVLMLLNNQPAVQPSVQEG*IDSIHS Trigger: AGAATGGATGGAATCAATGCAGCCTTCCTGGACAGA...GGGCTGCACTGCTGGCTGATTGTTTAGCAGCATGAGAACAGTAACAGAGGAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR TCA 90 bp | TTGAGAAGTGCATTCATCACAGTTAAAAGCTTCCTGAAATTTGTCGGTAGAACACCCATTGGTGTGGGTTaGTGGGGGCCTGGACCTCTC | + |
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Preference number: 4 (lower is better) Translates to: LRSAFITVKSFLKFVGRTPIGVG*WGPGPL Trigger: GAGAGGTCCAGGCCCCCATCAACCCACACCAATGGG...TGTTCTACCGACAAATTTCAGGAAGCTTTTAACTGTGATGAATGCACTTCTCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR TCA 90 bp | AAGGTCCTCAGAATGATGATTCACAGGCCCTGGATCTTCTCACCCTGTAGTGCCTCTTTAAGCTTTTGCTaGTCCAGATGTTGTCCACAG | + |
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Preference number: 4 (lower is better) Translates to: KVLRMMIHRPWIFSPCSASLSFC*SRCCPQ Trigger: CTGTGGACAACATCTGGATCAGCAAAAGCTTAAAGA...GGCACTACAGGGTGAGAAGATCCAGGGCCTGTGAATCATCATTCTGAGGACCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR GCA 90 bp | AAGGTCCTCAGAATGATGATTCACAGGCCCTGGATCTTCTCACCCTGTAGTGCCTTGTCAAGCAGCTCTTaGACAGCTAGAAGTTTGATG | + |
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Preference number: 4 (lower is better) Translates to: KVLRMMIHRPWIFSPCSALSSSS*TARSLM Trigger: CATCAAACTTCTAGCTGTGCAAGAGCTGCTTGACAA...GGCACTACAGGGTGAGAAGATCCAGGGCCTGTGAATCATCATTCTGAGGACCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR GCA 90 bp | CCAGGTTCTAAAGTGTTCACAAAGTGGACAGTGGTCCAGGGACCAAGACTAAGGCATCACTGTGATTCTTaGTTGAATTCTCAGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: PGSKVFTKWTVVQGPRLRHHCDS*LNSQLL Trigger: CAGGAGCTGAGAATTCAAGCAAGAATCACAGTGATG...CCTTAGTCTTGGTCCCTGGACCACTGTCCACTTTGTGAACACTTTAGAACCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS TCA 90 bp | GAGGAAAGGGCTGGGGCCCACAGCCTTAGCATGACCGTTGCTGGGTaGGCTCTCCCGCCCGGGGATGTCTCTCAGCTCCACGTTGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: EERAGAHSLSMTVAG*ALPPGDVSQLHVGC Trigger: GCAGCCAACGTGGAGCTGAGAGACATCCCCGGGCGGGAGAGCTCACCCAGCAACGGTCATGCTAAGGCTGTGGGCCCCAGCCCTTTCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS TCA 90 bp | ACCTTGAATCTGGCGAGGAAAGGGCTGGGGCCCACAGCCTTAGCATaGCCGTTGCTGGGTGAGCTCTCCCGCCCGGGGATGTCTCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: TLNLARKGLGPTALA*PLLGELSRPGMSLS Trigger: GCTGAGAGACATCCCCGGGCGGGAGAGCTCACCCAGCAACGGTCATGCTAAGGCTGTGGGCCCCAGCCCTTTCCTCGCCAGATTCAAGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR CAA 90 bp | CAGCTCCGCCATGATGCCCACCATAGCCAGTGCCTGACAGGCTCCCCTCAGGCCTCTCTCAGCTCCACGTaGGCTGCTGTGTCCCATAGG | + |
|
Preference number: 5 (lower is better) Translates to: QLRHDAHHSQCLTGSPQASLSST*AAVSHR Trigger: CCTATGGGACACAGCAGCCAACGTGGAGCTGAGAGA...GGCCTGAGGGGAGCCTGTCAGGCACTGGCTATGGTGGGCATCATGGCGGAGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS CCA 90 bp | TGCTGGGTGAGCTCTCCCGCCCGGGGATGTCTCTCAGCTCCACGTTaGCTGCTGTGTCCCATAGGAATCCAGAGTAGCAGGGGCCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CWVSSPARGCLSAPR*LLCPIGIQSSRGPS Trigger: AGAAGGGCCCCTGCTACTCTGGATTCCTATGGGACACAGCAGCCAACGTGGAGCTGAGAGACATCCCCGGGCGGGAGAGCTCACCCAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR CAA 90 bp | CAGCAGTGCAGCCCCCATCCCAAGCCCGAACTCAGCTACATAGCGTCAAGACGTCCCCATTGGTGTGGGTaGATGGGGGCCTGGACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: QQCSPHPKPELSYIASRRPHWCG*MGAWTS Trigger: AGAGGTCCAGGCCCCCATCAACCCACACCAATGGGG...ACGTCTTGACGCTATGTAGCTGAGTTCGGGCTTGGGATGGGGGCTGCACTGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR CAA 90 bp | CAGCTCCGCCATGATGCCCACCATAGCCAGTGCCTGACAGGCTCCCCTCAGGCCCTGGGGACTTCCTTCTaGCTCCAGTCCTTTTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: QLRHDAHHSQCLTGSPQALGTSF*LQSFSM Trigger: CATGGAAAAGGACTGGAGCAAGAAGGAAGTCCCCAG...GGCCTGAGGGGAGCCTGTCAGGCACTGGCTATGGTGGGCATCATGGCGGAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS TCA 90 bp | ATGCTGAGGGCCATCTTCTCGCTGAGGCCCCGGACACTCATGAGCTaGGCAAGGGTGGCTGTGTTGATATTGACTCGAGGAGTGAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: MLRAIFSLRPRTLMS*ARVAVLILTRGVRG Trigger: GCCCCTCACTCCTCGAGTCAATATCAACACAGCCACCCTTGCTCAGCTCATGAGTGTCCGGGGCCTCAGCGAGAAGATGGCCCTCAGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR CAA 90 bp | CGTCGCAGTTCCAGCCAGCTCCGCCATGATGCCCACCATAGCCAGTGCCTGACAAGGATGTTGCTGAAGTaGCAGGCAGCGCTGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: RRSSSQLRHDAHHSQCLTRMLLK*QAALNL Trigger: CAAGTTCAGCGCTGCCTGCAACTTCAGCAACATCCT...TGTCAGGCACTGGCTATGGTGGGCATCATGGCGGAGCTGGCTGGAACTGCGACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR CAA 90 bp | GAGGCAGAAACGAGAGCTGTGGCACTGCTTGTCAGCCTGAGCCACTGTTCCCATCGAACCCCCGGGTTATaGGCCTTCTCCACAGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: EAETRAVALLVSLSHCSHRTPGL*AFSTEQ Trigger: CTGCTCTGTGGAGAAGGCCAATAACCCGGGGGTTCG...ATGGGAACAGTGGCTCAGGCTGACAAGCAGTGCCACAGCTCTCGTTTCTGCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS TCA 90 bp | CAGGATGTTGCTGAAGTTGCAGGCAGCGCTGAACTTGCGGTTATGTaGCAGGTCCGAGGGATCTCTGGGGATAGAGCGATGGCAGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QDVAEVAGSAELAVM*QVRGISGDRAMAAQ Trigger: CTGGGCTGCCATCGCTCTATCCCCAGAGATCCCTCGGACCTGTCACATAACCGCAAGTTCAGCGCTGCCTGCAACTTCAGCAACATCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS GCA 90 bp | GAAGCCGCCGATATATTCTCGGTATTCCACGATGCTTCGGGCCACTaGACGTGTCACCCCAGGCAGAGTCATCAGTTCCTCCTCAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: EAADIFSVFHDASGH*TCHPRQSHQFLLSG Trigger: GCCACTGAGGAGGAACTGATGACTCTGCCTGGGGTGACACGTGCAGTGGCCCGAAGCATCGTGGAATACCGAGAATATATCGGCGGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS CCA 90 bp | TTTCCAGAAGCGTCATGCACACCACCTCTCGAACCCCCGGGTTATTaGCCTTCTCCACAGAGCAGCCCTGTAAGTTCCACGTGGCCAACC | + |
|
Preference number: 5 (lower is better) Translates to: FPEASCTPPLEPPGY*PSPQSSPVSSTWPT Trigger: GGTTGGCCACGTGGAACTTACAGGGCTGCTCTGTGGAGAAGGCCAATAACCCGGGGGTTCGAGAGGTGGTGTGCATGACGCTTCTGGAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS CCA 90 bp | CAATGGACCTCCAGCATCCTCGGGACCCCTTCCACTTGCGGATGTTaGGCAGGATCGGCTGGTTCAGCTCTGTACAGAACTTTTCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: QWTSSILGTPSTCGC*AGSAGSALYRTFPG Trigger: CCCTGGAAAAGTTCTGTACAGAGCTGAACCAGCCGATCCTGCCCAACATCCGCAAGTGGAAGGGGTCCCGAGGATGCTGGAGGTCCATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR CAA 90 bp | CGTCGCAGTTCCAGCCAGCTCCGCCATGATGCCCACCATAGCCAGTGCCTGACATTTTCCAGGGCCTCTTaGTCAAGCAGCTCTTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: RRSSSQLRHDAHHSQCLTFSRAS*SSSSCT Trigger: TGTGCAAGAGCTGCTTGACAAAGAGGCCCTGGAAAA...TGTCAGGCACTGGCTATGGTGGGCATCATGGCGGAGCTGGCTGGAACTGCGACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS TCA 90 bp | GGGATGAGGCTTGGCAGTGAAGGTAAGACCCCCATTGGTGTGGGTTaGTGGGGGCCTGGACCTCTCTGCGAACACCTGGTGTCTTATTCT | + |
|
Preference number: 5 (lower is better) Translates to: GMRLGSEGKTPIGVG*WGPGPLCEHLVSYS Trigger: AGAATAAGACACCAGGTGTTCGCAGAGAGGTCCAGGCCCCCATCAACCCACACCAATGGGGGTCTTACCTTCACTGCCAAGCCTCATCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS GCA 90 bp | GGCTGCTGCTCAGCCAGAAGATCCCGCCTCAGGGAACTGGGAGAGTaGTGTGCAGAGTTACCCTTGCTGCTCACACAGATCTCAAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: GCCSARRSRLRELGE*CAELPLLLTQISNL Trigger: CAAGTTTGAGATCTGTGTGAGCAGCAAGGGTAACTCTGCACAGCACTCTCCCAGTTCCCTGAGGCGGGATCTTCTGGCTGAGCAGCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS GCA 90 bp | TCTCAGCAACAATGGACCTCCAGCATCCTCGGGACCCCTTCCACTTaGGGATGTTGGGCAGGATCGGCTGGTTCAGCTCTGTACAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: SQQQWTSSILGTPST*GCWAGSAGSALYRT Trigger: AGTTCTGTACAGAGCTGAACCAGCCGATCCTGCCCAACATCCGCAAGTGGAAGGGGTCCCGAGGATGCTGGAGGTCCATTGTTGCTGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS CCA 90 bp | CATCCTCGGGACCCCTTCCACTTGCGGATGTTGGGCAGGATCGGCTaGTTCAGCTCTGTACAGAACTTTTCCAGGGCCTCTTTGTCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: HPRDPFHLRMLGRIG*FSSVQNFSRASLSS Trigger: GCTTGACAAAGAGGCCCTGGAAAAGTTCTGTACAGAGCTGAACCAGCCGATCCTGCCCAACATCCGCAAGTGGAAGGGGTCCCGAGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS TCA 90 bp | AGGTCCAAGTCCTCACTCTGCAGGCTCAGAGATGTGGGACTGGGATaGGGCTTGGCAGTGAAGGTAAGACCCCCATTGGTGTGGGTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: RSKSSLCRLRDVGLG*GLAVKVRPPLVWVD Trigger: ATCAACCCACACCAATGGGGGTCTTACCTTCACTGCCAAGCCTCATCCCAGTCCCACATCTCTGAGCCTGCAGAGTGAGGACTTGGACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS GCA 90 bp | CTGCTCAGCCAGAAGATCCCGCCTCAGGGAACTGGGAGAGTGCTGTaGAGAGTTACCCTTGCTGCTCACACAGATCTCAAACTTGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLSQKIPPQGTGRVL*RVTLAAHTDLKLDL Trigger: CAGGTCAAGTTTGAGATCTGTGTGAGCAGCAAGGGTAACTCTGCACAGCACTCTCCCAGTTCCCTGAGGCGGGATCTTCTGGCTGAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS CCA 90 bp | CACAGGGCAATGTTCAGAAGCGACTCCACCCCAGGACCAGTTATCTaGAATCCAAGGGTTTGTGAGCCCTTCTCTCACAACAGCCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: HRAMFRSDSTPGPVI*NPRVCEPFSHNSPV Trigger: CACTGGGCTGTTGTGAGAGAAGGGCTCACAAACCCTTGGATTCCAGATAACTGGTCCTGGGGTGGAGTCGCTTCTGAACATTGCCCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR CAA 90 bp | CTCTGTTACTGTTCTCATGCTGCTAAACAATCAGCCAGCAGTGCAGCCCCCATCTTGACCTGTTCCAGTTaGGTGGCCCCTACACCACTG | + |
|
Preference number: 5 (lower is better) Translates to: LCYCSHAAKQSASSAAPILTCSS*VAPTPL Trigger: CAGTGGTGTAGGGGCCACCAAACTGGAACAGGTCAA...GATGGGGGCTGCACTGCTGGCTGATTGTTTAGCAGCATGAGAACAGTAACAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR CAA 90 bp | CTCAGAATGATGATTCACAGGCCCTGGATCTTCTCACCCTGTAGTGCCATCTCCGTGGCTGTGTTGATATaGACTCGAGGAGTGAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LRMMIHRPWIFSPCSAISVAVLI*TRGVRG Trigger: GCCCCTCACTCCTCGAGTCAATATCAACACAGCCAC...GGAGATGGCACTACAGGGTGAGAAGATCCAGGGCCTGTGAATCATCATTCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS TCA 90 bp | TCCTGGAGGGTTAGTGCAAAGTTCAATAATCGGTGGCCATCACTGTaGTTCTTGCTTGAATTCTCAGCTCCTGGGAGGGCCAGGGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SWRVSAKFNNRWPSL*FLLEFSAPGRARAV Trigger: GACAGCCCTGGCCCTCCCAGGAGCTGAGAATTCAAGCAAGAATCACAGTGATGGCCACCGATTATTGAACTTTGCACTAACCCTCCAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR CAA 90 bp | AAGGTCCTCAGAATGATGATTCACAGGCCCTGGATCTTCTCACCCTGTAGTGCCCACAGACTTGGAGCCTaGAGGATTCCTGGTGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: KVLRMMIHRPWIFSPCSAHRLGA*RIPGAD Trigger: ATCAGCACCAGGAATCCTCAAGGCTCCAAGTCTGTG...GGCACTACAGGGTGAGAAGATCCAGGGCCTGTGAATCATCATTCTGAGGACCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR CAA 90 bp | CTCAGAATGATGATTCACAGGCCCTGGATCTTCTCACCCTGTAGTGCCATCTCCTCTAAGGTGACTCCATaGCCATTCCTGGGGACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LRMMIHRPWIFSPCSAISSKVTP*PFLGTS Trigger: GGAAGTCCCCAGGAATGGCAATGGAGTCACCTTAGA...GGAGATGGCACTACAGGGTGAGAAGATCCAGGGCCTGTGAATCATCATTCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR CAA 90 bp | GAGGCAGAAACGAGAGCTGTGGCACTGCTTGTCAGCCTGAGCCACTGTTCCCATCGCTCATGTTTAATGTaGGCTTCACTTGGCTCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: EAETRAVALLVSLSHCSHRSCLM*ASLGSK Trigger: CTTAGAGCCAAGTGAAGCCAACATTAAACATGAGCG...ATGGGAACAGTGGCTCAGGCTGACAAGCAGTGCCACAGCTCTCGTTTCTGCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS TCA 90 bp | GTCATCAGTTCCTCCTCAGTGGCAGTGTTGATATTTAGCCGCTCCTaGTTCACCAGGATGTTGCTGAAGTTGCAGGCAGCGCTGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: VISSSSVAVLIFSRS*FTRMLLKLQAALNL Trigger: CAAGTTCAGCGCTGCCTGCAACTTCAGCAACATCCTGGTGAATCAGGAGCGGCTAAATATCAACACTGCCACTGAGGAGGAACTGATGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS CCA 90 bp | TTCTTGCTTGAATTCTCAGCTCCTGGGAGGGCCAGGGCTGTCAGCTaGAGGTTAACCAGGGTTAAGTCATTACTTCCCACCTTGAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: FLLEFSAPGRARAVS*RLTRVKSLLPTLNL Trigger: CAGATTCAAGGTGGGAAGTAATGACTTAACCCTGGTTAACCTCCAGCTGACAGCCCTGGCCCTCCCAGGAGCTGAGAATTCAAGCAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR CAA 90 bp | AAGGTCCTCAGAATGATGATTCACAGGCCCTGGATCTTCTCACCCTGTAGTGCCTTGCTGATCCAGATGTaGTCCACAGACTTGGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: KVLRMMIHRPWIFSPCSALLIQM*STDLEP Trigger: AGGCTCCAAGTCTGTGGACAACATCTGGATCAGCAA...GGCACTACAGGGTGAGAAGATCCAGGGCCTGTGAATCATCATTCTGAGGACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR CAA 90 bp | TGTTCTCATGCTGCTAAACAATCAGCCAGCAGTGCAGCCCCCATCCCAAGCCCGACTTTCTTTAAGCTTTaGCTGATCCAGATGTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: CSHAAKQSASSAAPIPSPTFFKL*LIQMLS Trigger: GGACAACATCTGGATCAGCAAAAGCTTAAAGAAAGT...CGGGCTTGGGATGGGGGCTGCACTGCTGGCTGATTGTTTAGCAGCATGAGAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS GCA 90 bp | AAACTTGACCTGTTCCAGTTTGGTGGCCCCTACACCACTGACAAGTaGCAGATCTTCCACCTTTTTGAAGCCGCCGATATATTCTCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: KLDLFQFGGPYTTDK*QIFHLFEAADIFSV Trigger: TACCGAGAATATATCGGCGGCTTCAAAAAGGTGGAAGATCTGGCACTTGTCAGTGGTGTAGGGGCCACCAAACTGGAACAGGTCAAGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS GCA 90 bp | GGACCTCTCTGCGAACACCTGGTGTCTTATTCTGTCCAGGAAGGCTaGATTGATTCCATCCATTCTCACCAAGTCCTCAACACTTCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GPLCEHLVSYSVQEG*IDSIHSHQVLNTSK Trigger: TTTCGAAGTGTTGAGGACTTGGTGAGAATGGATGGAATCAATGCAGCCTTCCTGGACAGAATAAGACACCAGGTGTTCGCAGAGAGGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR CAA 90 bp | ATGATTCACAGGCCCTGGATCTTCTCACCCTGTAGTGCCATCTCCATCCTATGCACACAGATCTCAAACTaGACCTGTTCCAGTTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: MIHRPWIFSPCSAISILCTQISN*TCSSLV Trigger: CACCAAACTGGAACAGGTCAAGTTTGAGATCTGTGT...GCATAGGATGGAGATGGCACTACAGGGTGAGAAGATCCAGGGCCTGTGAATCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR CAA 90 bp | AAGGTCCTCAGAATGATGATTCACAGGCCCTGGATCTTCTCACCCTGTAGTGCCTGCACAGCTAGAAGTTaGATGCTGTTTTCCAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: KVLRMMIHRPWIFSPCSACTARS*MLFSRS Trigger: GCTTCTGGAAAACAGCATCAAACTTCTAGCTGTGCA...GGCACTACAGGGTGAGAAGATCCAGGGCCTGTGAATCATCATTCTGAGGACCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS TCA 90 bp | TCTCTGCGAACACCTGGTGTCTTATTCTGTCCAGGAAGGCTGCATTaGTTCCATCCATTCTCACCAAGTCCTCAACACTTCGAAAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SLRTPGVLFCPGRLH*FHPFSPSPQHFEKD Trigger: GTCCTTTTCGAAGTGTTGAGGACTTGGTGAGAATGGATGGAATCAATGCAGCCTTCCTGGACAGAATAAGACACCAGGTGTTCGCAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS GCA 90 bp | AGCTCTGTACAGAACTTTTCCAGGGCCTCTTTGTCAAGCAGCTCTTaGACAGCTAGAAGTTTGATGCTGTTTTCCAGAAGCGTCATGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SSVQNFSRASLSSSS*TARSLMLFSRSVMH Trigger: GTGCATGACGCTTCTGGAAAACAGCATCAAACTTCTAGCTGTGCAAGAGCTGCTTGACAAAGAGGCCCTGGAAAAGTTCTGTACAGAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR CAA 90 bp | TTGAGAAGTGCATTCATCACAGTTAAAAGCTTCCTGAAATTTGTCGGTAGAACATTCCACTTGCGGATGTaGGGCAGGATCGGCTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LRSAFITVKSFLKFVGRTFHLRM*GRIGWF Trigger: GAACCAGCCGATCCTGCCCAACATCCGCAAGTGGAA...TGTTCTACCGACAAATTTCAGGAAGCTTTTAACTGTGATGAATGCACTTCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS-3UTR CAA 90 bp | TTGAGAAGTGCATTCATCACAGTTAAAAGCTTCCTGAAATTTGTCGGTAGAACATGTGCAGAGTTACCCTaGCTGCTCACACAGATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LRSAFITVKSFLKFVGRTCAELP*LLTQIS Trigger: TGAGATCTGTGTGAGCAGCAAGGGTAACTCTGCACA...TGTTCTACCGACAAATTTCAGGAAGCTTTTAACTGTGATGAATGCACTTCTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS GCA 72 bp | CAATGGACCTCCAGCATCCTCGGGACCCCTTCCACTTaGGGATGTTGGGCAGGATCGGCTGGTTCAGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: QWTSSILGTPST*GCWAGSAGSAL Trigger: CAGAGCTGAACCAGCCGATCCTGCCCAACATCCGCAAGTGGAAGGGGTCCCGAGGATGCTGGAGGTCCATTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS CCA 72 bp | AGCTCTCCCGCCCGGGGATGTCTCTCAGCTCCACGTTaGCTGCTGTGTCCCATAGGAATCCAGAGTAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SSPARGCLSAPR*LLCPIGIQSSR Trigger: CCTGCTACTCTGGATTCCTATGGGACACAGCAGCCAACGTGGAGCTGAGAGACATCCCCGGGCGGGAGAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS TCA 72 bp | CTTGGCAGTGAAGGTAAGACCCCCATTGGTGTGGGTTaGTGGGGGCCTGGACCTCTCTGCGAACACCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LGSEGKTPIGVG*WGPGPLCEHLV Trigger: CACCAGGTGTTCGCAGAGAGGTCCAGGCCCCCATCAACCCACACCAATGGGGGTCTTACCTTCACTGCCAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
||
| CDS CCA 72 bp | GCTGCTGCTCAGCCAGAAGATCCCGCCTCAGGGAACTaGGAGAGTGCTGTGCAGAGTTACCCTTGCTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: AAAQPEDPASGN*ESAVQSYPCCS Trigger: TGAGCAGCAAGGGTAACTCTGCACAGCACTCTCCCAGTTCCCTGAGGCGGGATCTTCTGGCTGAGCAGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
||
| CDS CCA 72 bp | GCGTCATGCACACCACCTCTCGAACCCCCGGGTTATTaGCCTTCTCCACAGAGCAGCCCTGTAAGTTCCACG | + |
|
Preference number: 6 (lower is better) Translates to: ASCTPPLEPPGY*PSPQSSPVSST Trigger: CGTGGAACTTACAGGGCTGCTCTGTGGAGAAGGCCAATAACCCGGGGGTTCGAGAGGTGGTGTGCATGACGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS CAA 72 bp | CTCCAGCATCCTCGGGACCCCTTCCACTTGCGGATGTaGGGCAGGATCGGCTGGTTCAGCTCTGTACAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LQHPRDPFHLRM*GRIGWFSSVQN Trigger: GTTCTGTACAGAGCTGAACCAGCCGATCCTGCCCAACATCCGCAAGTGGAAGGGGTCCCGAGGATGCTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
||
| CDS CAA 72 bp | ACAATGGACCTCCAGCATCCTCGGGACCCCTTCCACTaGCGGATGTTGGGCAGGATCGGCTGGTTCAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: TMDLQHPRDPFH*RMLGRIGWFSS Trigger: AGAGCTGAACCAGCCGATCCTGCCCAACATCCGCAAGTGGAAGGGGTCCCGAGGATGCTGGAGGTCCATTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
||
| CDS CCA 72 bp | TCCAGCATCCTCGGGACCCCTTCCACTTGCGGATGTTaGGCAGGATCGGCTGGTTCAGCTCTGTACAGAACT | + |
|
Preference number: 6 (lower is better) Translates to: SSILGTPSTCGC*AGSAGSALYRT Trigger: AGTTCTGTACAGAGCTGAACCAGCCGATCCTGCCCAACATCCGCAAGTGGAAGGGGTCCCGAGGATGCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS CAA 72 bp | AGCGTCATGCACACCACCTCTCGAACCCCCGGGTTATaGGCCTTCTCCACAGAGCAGCCCTGTAAGTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SVMHTTSRTPGL*AFSTEQPCKFH Trigger: GTGGAACTTACAGGGCTGCTCTGTGGAGAAGGCCAATAACCCGGGGGTTCGAGAGGTGGTGTGCATGACGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
||
| CDS CAA 90 bp | TTTTCCAGAAGCGTCATGCACACCACCTCTCGAACCCCCGGGTTATaGGCCTTCTCCACAGAGCAGCCCTGTAAGTTCCACGTGGCCAAC | + |
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Preference number: 6 (lower is better) Translates to: FSRSVMHTTSRTPGL*AFSTEQPCKFHVAN Trigger: GTTGGCCACGTGGAACTTACAGGGCTGCTCTGTGGAGAAGGCCAATAACCCGGGGGTTCGAGAGGTGGTGTGCATGACGCTTCTGGAAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS CAA 90 bp | ACAATGGACCTCCAGCATCCTCGGGACCCCTTCCACTTGCGGATGTaGGGCAGGATCGGCTGGTTCAGCTCTGTACAGAACTTTTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: TMDLQHPRDPFHLRM*GRIGWFSSVQNFSR Trigger: CCTGGAAAAGTTCTGTACAGAGCTGAACCAGCCGATCCTGCCCAACATCCGCAAGTGGAAGGGGTCCCGAGGATGCTGGAGGTCCATTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS CAA 90 bp | TTCTCAGCAACAATGGACCTCCAGCATCCTCGGGACCCCTTCCACTaGCGGATGTTGGGCAGGATCGGCTGGTTCAGCTCTGTACAGAAC | + |
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Preference number: 6 (lower is better) Translates to: FSATMDLQHPRDPFH*RMLGRIGWFSSVQN Trigger: GTTCTGTACAGAGCTGAACCAGCCGATCCTGCCCAACATCCGCAAGTGGAAGGGGTCCCGAGGATGCTGGAGGTCCATTGTTGCTGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS TCA 72 bp | GCTGAAGTTGCAGGCAGCGCTGAACTTGCGGTTATGTaGCAGGTCCGAGGGATCTCTGGGGATAGAGCGATG | + |
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Preference number: 6 (lower is better) Translates to: AEVAGSAELAVM*QVRGISGDRAM Trigger: CATCGCTCTATCCCCAGAGATCCCTCGGACCTGTCACATAACCGCAAGTTCAGCGCTGCCTGCAACTTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS TCA 72 bp | GCCATCTTCTCGCTGAGGCCCCGGACACTCATGAGCTaGGCAAGGGTGGCTGTGTTGATATTGACTCGAGGA | + |
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Preference number: 6 (lower is better) Translates to: AIFSLRPRTLMS*ARVAVLILTRG Trigger: TCCTCGAGTCAATATCAACACAGCCACCCTTGCTCAGCTCATGAGTGTCCGGGGCCTCAGCGAGAAGATGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS TCA 72 bp | TCCTCACTCTGCAGGCTCAGAGATGTGGGACTGGGATaGGGCTTGGCAGTGAAGGTAAGACCCCCATTGGTG | + |
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Preference number: 6 (lower is better) Translates to: SSLCRLRDVGLG*GLAVKVRPPLV Trigger: CACCAATGGGGGTCTTACCTTCACTGCCAAGCCTCATCCCAGTCCCACATCTCTGAGCCTGCAGAGTGAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS GCA 72 bp | TCAGCCAGAAGATCCCGCCTCAGGGAACTGGGAGAGTaGTGTGCAGAGTTACCCTTGCTGCTCACACAGATC | + |
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Preference number: 6 (lower is better) Translates to: SARRSRLRELGE*CAELPLLLTQI Trigger: GATCTGTGTGAGCAGCAAGGGTAACTCTGCACAGCACTCTCCCAGTTCCCTGAGGCGGGATCTTCTGGCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS CCA 72 bp | GACCCCTTCCACTTGCGGATGTTGGGCAGGATCGGCTaGTTCAGCTCTGTACAGAACTTTTCCAGGGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: DPFHLRMLGRIG*FSSVQNFSRAS Trigger: AGAGGCCCTGGAAAAGTTCTGTACAGAGCTGAACCAGCCGATCCTGCCCAACATCCGCAAGTGGAAGGGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS CAA 72 bp | ACCAGGATGTTGCTGAAGTTGCAGGCAGCGCTGAACTaGCGGTTATGTGACAGGTCCGAGGGATCTCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: TRMLLKLQAALN*RLCDRSEGSLG Trigger: CCCCAGAGATCCCTCGGACCTGTCACATAACCGCAAGTTCAGCGCTGCCTGCAACTTCAGCAACATCCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS CCA 72 bp | GAATTCTCAGCTCCTGGGAGGGCCAGGGCTGTCAGCTaGAGGTTAACCAGGGTTAAGTCATTACTTCCCACC | + |
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Preference number: 6 (lower is better) Translates to: EFSAPGRARAVS*RLTRVKSLLPT Trigger: GGTGGGAAGTAATGACTTAACCCTGGTTAACCTCCAGCTGACAGCCCTGGCCCTCCCAGGAGCTGAGAATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS CAA 72 bp | TGGAGGTTAACCAGGGTTAAGTCATTACTTCCCACCTaGAATCTGGCGAGGAAAGGGCTGGGGCCCACAGCC | + |
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Preference number: 6 (lower is better) Translates to: WRLTRVKSLLPT*NLARKGLGPTA Trigger: GGCTGTGGGCCCCAGCCCTTTCCTCGCCAGATTCAAGGTGGGAAGTAATGACTTAACCCTGGTTAACCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS GCA 72 bp | GATATATTCTCGGTATTCCACGATGCTTCGGGCCACTaGACGTGTCACCCCAGGCAGAGTCATCAGTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: DIFSVFHDASGH*TCHPRQSHQFL Trigger: GAGGAACTGATGACTCTGCCTGGGGTGACACGTGCAGTGGCCCGAAGCATCGTGGAATACCGAGAATATATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS GCA 72 bp | CAGAAGATCCCGCCTCAGGGAACTGGGAGAGTGCTGTaGAGAGTTACCCTTGCTGCTCACACAGATCTCAAA | + |
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Preference number: 6 (lower is better) Translates to: QKIPPQGTGRVL*RVTLAAHTDLK Trigger: TTTGAGATCTGTGTGAGCAGCAAGGGTAACTCTGCACAGCACTCTCCCAGTTCCCTGAGGCGGGATCTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS CAA 90 bp | TTGGTGGCCCCTACACCACTGACAAGTGCCAGATCTTCCACCTTTTaGAAGCCGCCGATATATTCTCGGTATTCCACGATGCTTCGGGCC | + |
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Preference number: 6 (lower is better) Translates to: LVAPTPLTSARSSTF*KPPIYSRYSTMLRA Trigger: GGCCCGAAGCATCGTGGAATACCGAGAATATATCGGCGGCTTCAAAAAGGTGGAAGATCTGGCACTTGTCAGTGGTGTAGGGGCCACCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS TCA 72 bp | TCCTCCTCAGTGGCAGTGTTGATATTTAGCCGCTCCTaGTTCACCAGGATGTTGCTGAAGTTGCAGGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: SSSVAVLIFSRS*FTRMLLKLQAA Trigger: CGCTGCCTGCAACTTCAGCAACATCCTGGTGAATCAGGAGCGGCTAAATATCAACACTGCCACTGAGGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS CAA 72 bp | GCAGAGTTACCCTTGCTGCTCACACAGATCTCAAACTaGACCTGTTCCAGTTTGGTGGCCCCTACACCACTG | + |
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Preference number: 6 (lower is better) Translates to: AELPLLLTQISN*TCSSLVAPTPL Trigger: CAGTGGTGTAGGGGCCACCAAACTGGAACAGGTCAAGTTTGAGATCTGTGTGAGCAGCAAGGGTAACTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS CAA 72 bp | CTCAGGGAACTGGGAGAGTGCTGTGCAGAGTTACCCTaGCTGCTCACACAGATCTCAAACTTGACCTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: LRELGECCAELP*LLTQISNLTCS Trigger: GGAACAGGTCAAGTTTGAGATCTGTGTGAGCAGCAAGGGTAACTCTGCACAGCACTCTCCCAGTTCCCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS TCA 72 bp | CAGGCAGAGTCATCAGTTCCTCCTCAGTGGCAGTGTTaGTATTTAGCCGCTCCTGATTCACCAGGATGTTGC | + |
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Preference number: 6 (lower is better) Translates to: QAESSVPPQWQC*YLAAPDSPGCC Trigger: GCAACATCCTGGTGAATCAGGAGCGGCTAAATATCAACACTGCCACTGAGGAGGAACTGATGACTCTGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS GCA 72 bp | CTGTTCCAGTTTGGTGGCCCCTACACCACTGACAAGTaGCAGATCTTCCACCTTTTTGAAGCCGCCGATATA | + |
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Preference number: 6 (lower is better) Translates to: LFQFGGPYTTDK*QIFHLFEAADI Trigger: TATATCGGCGGCTTCAAAAAGGTGGAAGATCTGGCACTTGTCAGTGGTGTAGGGGCCACCAAACTGGAACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS CCA 72 bp | ATGTTCAGAAGCGACTCCACCCCAGGACCAGTTATCTaGAATCCAAGGGTTTGTGAGCCCTTCTCTCACAAC | + |
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Preference number: 6 (lower is better) Translates to: MFRSDSTPGPVI*NPRVCEPFSHN Trigger: GTTGTGAGAGAAGGGCTCACAAACCCTTGGATTCCAGATAACTGGTCCTGGGGTGGAGTCGCTTCTGAACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS CAA 72 bp | CTGCTCACACAGATCTCAAACTTGACCTGTTCCAGTTaGGTGGCCCCTACACCACTGACAAGTGCCAGATCT | + |
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Preference number: 6 (lower is better) Translates to: LLTQISNLTCSS*VAPTPLTSARS Trigger: AGATCTGGCACTTGTCAGTGGTGTAGGGGCCACCAAACTGGAACAGGTCAAGTTTGAGATCTGTGTGAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS CAA 90 bp | TTACCCTTGCTGCTCACACAGATCTCAAACTTGACCTGTTCCAGTTaGGTGGCCCCTACACCACTGACAAGTGCCAGATCTTCCACCTTT | + |
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Preference number: 6 (lower is better) Translates to: LPLLLTQISNLTCSS*VAPTPLTSARSSTF Trigger: AAAGGTGGAAGATCTGGCACTTGTCAGTGGTGTAGGGGCCACCAAACTGGAACAGGTCAAGTTTGAGATCTGTGTGAGCAGCAAGGGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS CAA 72 bp | TTAATGTTGGCTTCACTTGGCTCTAAGGTGACTCCATaGCCATTCCTGGGGACTTCCTTCTTGCTCCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: LMLASLGSKVTP*PFLGTSFLLQS Trigger: GGACTGGAGCAAGAAGGAAGTCCCCAGGAATGGCAATGGAGTCACCTTAGAGCCAAGTGAAGCCAACATTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS CAA 90 bp | CGCTCATGTTTAATGTTGGCTTCACTTGGCTCTAAGGTGACTCCATaGCCATTCCTGGGGACTTCCTTCTTGCTCCAGTCCTTTTCCATG | + |
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Preference number: 6 (lower is better) Translates to: RSCLMLASLGSKVTP*PFLGTSFLLQSFSM Trigger: CATGGAAAAGGACTGGAGCAAGAAGGAAGTCCCCAGGAATGGCAATGGAGTCACCTTAGAGCCAAGTGAAGCCAACATTAAACATGAGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS TCA 72 bp | GTTAGTGCAAAGTTCAATAATCGGTGGCCATCACTGTaGTTCTTGCTTGAATTCTCAGCTCCTGGGAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: VSAKFNNRWPSL*FLLEFSAPGRA Trigger: GGCCCTCCCAGGAGCTGAGAATTCAAGCAAGAATCACAGTGATGGCCACCGATTATTGAACTTTGCACTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS CAA 72 bp | CCTACACCACTGACAAGTGCCAGATCTTCCACCTTTTaGAAGCCGCCGATATATTCTCGGTATTCCACGATG | + |
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Preference number: 6 (lower is better) Translates to: PTPLTSARSSTF*KPPIYSRYSTM Trigger: CATCGTGGAATACCGAGAATATATCGGCGGCTTCAAAAAGGTGGAAGATCTGGCACTTGTCAGTGGTGTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS CAA 72 bp | TTTGCTGATCCAGATGTTGTCCACAGACTTGGAGCCTaGAGGATTCCTGGTGCTGATGTTGGTGAAAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: FADPDVVHRLGA*RIPGADVGESV Trigger: CACACTTTCACCAACATCAGCACCAGGAATCCTCAAGGCTCCAAGTCTGTGGACAACATCTGGATCAGCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS CAA 90 bp | CTCTCTGCGAACACCTGGTGTCTTATTCTGTCCAGGAAGGCTGCATaGATTCCATCCATTCTCACCAAGTCCTCAACACTTCGAAAAGGA | + |
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Preference number: 6 (lower is better) Translates to: LSANTWCLILSRKAA*IPSILTKSSTLRKG Trigger: TCCTTTTCGAAGTGTTGAGGACTTGGTGAGAATGGATGGAATCAATGCAGCCTTCCTGGACAGAATAAGACACCAGGTGTTCGCAGAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS TCA 72 bp | ACACCTGGTGTCTTATTCTGTCCAGGAAGGCTGCATTaGTTCCATCCATTCTCACCAAGTCCTCAACACTTC | + |
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Preference number: 6 (lower is better) Translates to: TPGVLFCPGRLH*FHPFSPSPQHF Trigger: GAAGTGTTGAGGACTTGGTGAGAATGGATGGAATCAATGCAGCCTTCCTGGACAGAATAAGACACCAGGTGT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS GCA 72 bp | CAGAACTTTTCCAGGGCCTCTTTGTCAAGCAGCTCTTaGACAGCTAGAAGTTTGATGCTGTTTTCCAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: QNFSRASLSSSS*TARSLMLFSRS Trigger: GCTTCTGGAAAACAGCATCAAACTTCTAGCTGTGCAAGAGCTGCTTGACAAAGAGGCCCTGGAAAAGTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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| CDS CCA 72 bp | AAAATAACAACATCCTTTTCTCCTTTCAGGGTTTCCTaGAGGGTTAGTGCAAAGTTCAATAATCGGTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: KITTSFSPFRVS*RVSAKFNNRWP Trigger: TGGCCACCGATTATTGAACTTTGCACTAACCCTCCAGGAAACCCTGAAAGGAGAAAAGGATGTTGTTATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040677.6 |
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