Pregenerated sensors for EEFSEC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033216Ensembl transcript IDs: ENSMUST00000165242.4, ENSMUST00000203213.3, ENSMUST00000203886.2, ENSMUST00000204459.3, ENSMUST00000205014.2, ENSMUST00000205179.3
Found 295 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGTGTCACAGGCTGGATGGGCTCTGGCCGTTCAGTGCCCTCCTCTaGCTTGGTGGTCTCTCCACGGCCGGCTCGGCTCCGCTTCTTGAG | + |
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Preference number: 1 (lower is better) Translates to: ECHRLDGLWPFSALL*LGGLSTAGSAPLLE Trigger: CTCAAGAAGCGGAGCCGAGCCGGCCGTGGAGAGACCACCAAGCCAGAGGAGGGCACTGAACGGCCAGAGCCCATCCAGCCTGTGACACTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
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| 3UTR CCA 90 bp | CTCAGACTGGGGAGGTTGAGGCATGTCTGGGGGCATCTGGCACTGTaGTCTGGCTTGCAGCTGGGCAGGATGGTTCATTCAGGGAGTCTG | + |
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Preference number: 1 (lower is better) Translates to: LRLGRLRHVWGHLAL*SGLQLGRMVHSGSL Trigger: CAGACTCCCTGAATGAACCATCCTGCCCAGCTGCAAGCCAGACCACAGTGCCAGATGCCCCCAGACATGCCTCAACCTCCCCAGTCTGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
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| 3UTR CCA 90 bp | ACTGGGGAGGTTGAGGCATGTCTGGGGGCATCTGGCACTGTGGTCTaGCTTGCAGCTGGGCAGGATGGTTCATTCAGGGAGTCTGTACCA | + |
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Preference number: 1 (lower is better) Translates to: TGEVEACLGASGTVV*LAAGQDGSFRESVP Trigger: TGGTACAGACTCCCTGAATGAACCATCCTGCCCAGCTGCAAGCCAGACCACAGTGCCAGATGCCCCCAGACATGCCTCAACCTCCCCAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
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| 3UTR GCA 90 bp | AGCTTGGGGTCAAACTGGGTGACACAGATGCCCAGTCGGTCCCCCTaGATGGCAGAGGTGACGGGTGTATGGAACATCTGCATGGACTTC | + |
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Preference number: 1 (lower is better) Translates to: SLGSNWVTQMPSRSP*MAEVTGVWNICMDF Trigger: GAAGTCCATGCAGATGTTCCATACACCCGTCACCTCTGCCATGCAGGGGGACCGACTGGGCATCTGTGTCACCCAGTTTGACCCCAAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205014.2 |
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| 3UTR CCA 90 bp | AGCTCTCGAGCCCTAAACCCAATGCACACAACTCCCTGTGATGCCTaGGAAGCCCTGGGAGACAGGCAGACTATGGGCACACTAGGTCAC | + |
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Preference number: 1 (lower is better) Translates to: SSRALNPMHTTPCDA*EALGDRQTMGTLGH Trigger: GTGACCTAGTGTGCCCATAGTCTGCCTGTCTCCCAGGGCTTCCCAGGCATCACAGGGAGTTGTGTGCATTGGGTTTAGGGCTCGAGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
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| 3UTR CCA 90 bp | AGGGTCCAGGTACTCCACCCCTGGTCTAGCACCCTTGGGAGTCCATaGTTCCAAAAATGGAGGCCAGGGCCTATTGACCTCTCGTGCAAG | + |
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Preference number: 1 (lower is better) Translates to: RVQVLHPWSSTLGSP*FQKWRPGPIDLSCK Trigger: CTTGCACGAGAGGTCAATAGGCCCTGGCCTCCATTTTTGGAACCATGGACTCCCAAGGGTGCTAGACCAGGGGTGGAGTACCTGGACCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
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| 3UTR CCA 90 bp | TCTGGGGGCATCTGGCACTGTGGTCTGGCTTGCAGCTGGGCAGGATaGTTCATTCAGGGAGTCTGTACCATGCGCTTCTGGGTGTCAAAG | + |
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Preference number: 1 (lower is better) Translates to: SGGIWHCGLACSWAG*FIQGVCTMRFWVSK Trigger: CTTTGACACCCAGAAGCGCATGGTACAGACTCCCTGAATGAACCATCCTGCCCAGCTGCAAGCCAGACCACAGTGCCAGATGCCCCCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
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| 3UTR TCA 90 bp | CTTGAGGGCAGGGATCTCCACACTGTCCCCAAGGCTGATAGTGCCTaGGAGGATAGTCCCAGTCATCACGGTGCCTTGACCCTTGATGGA | + |
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Preference number: 1 (lower is better) Translates to: LEGRDLHTVPKADSA*EDSPSHHGALTLDG Trigger: TCCATCAAGGGTCAAGGCACCGTGATGACTGGGACTATCCTCTCAGGCACTATCAGCCTTGGGGACAGTGTGGAGATCCCTGCCCTCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205014.2 |
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| 3UTR CCA 90 bp | GCTCTGCTAAGGCCATTTTCTAGTAGGCCTCGTTGCTATCCTGAGTaGGTTCAGGGATGGAGTGGCAGGCCCTCCTGGCACTGTTCCTCA | + |
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Preference number: 1 (lower is better) Translates to: ALLRPFSSRPRCYPE*VQGWSGRPSWHCSS Trigger: TGAGGAACAGTGCCAGGAGGGCCTGCCACTCCATCCCTGAACCCACTCAGGATAGCAACGAGGCCTACTAGAAAATGGCCTTAGCAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| 3UTR TCA 90 bp | AGGCTGATAGTGCCTGAGAGGATAGTCCCAGTCATCACGGTGCCTTaGCCCTTGATGGAGAAGCAGTGGTCCACAGACATAAGGAATGGT | + |
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Preference number: 1 (lower is better) Translates to: RLIVPERIVPVITVP*PLMEKQWSTDIRNG Trigger: ACCATTCCTTATGTCTGTGGACCACTGCTTCTCCATCAAGGGTCAAGGCACCGTGATGACTGGGACTATCCTCTCAGGCACTATCAGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205014.2 |
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| 3UTR TCA 90 bp | CAGGAAACTCAGCTGTTCAGAAAACCTCCATTCTTCAAGGTCCACTaGCAACATCCCAGGAGCCACTTGGTTGAACCTAGCAGCTCTCGA | + |
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Preference number: 1 (lower is better) Translates to: QETQLFRKPPFFKVH*QHPRSHLVEPSSSR Trigger: TCGAGAGCTGCTAGGTTCAACCAAGTGGCTCCTGGGATGTTGTCAGTGGACCTTGAAGAATGGAGGTTTTCTGAACAGCTGAGTTTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
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| 3UTR CCA 90 bp | GCCAAACCGAGAAACATTGGGACATCTGCTCCCCTTACAGGTGTCTaGAAAAGCTCTGATTTCCTTCGTTGGTCAGTTCTATCCTCTTGC | + |
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Preference number: 1 (lower is better) Translates to: AKPRNIGTSAPLTGV*KSSDFLRWSVLSSC Trigger: GCAAGAGGATAGAACTGACCAACGAAGGAAATCAGAGCTTTTCCAGACACCTGTAAGGGGAGCAGATGTCCCAATGTTTCTCGGTTTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
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| 3UTR CAA 90 bp | GTCACAGGCTGGATGGGCTCTGGCCGTTCAGTGCCCTCCTCTGGCTaGGTGGTCTCTCCACGGCCGGCTCGGCTCCGCTTCTTGAGTGTA | + |
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Preference number: 2 (lower is better) Translates to: VTGWMGSGRSVPSSG*VVSPRPARLRFLSV Trigger: TACACTCAAGAAGCGGAGCCGAGCCGGCCGTGGAGAGACCACCAAGCCAGAGGAGGGCACTGAACGGCCAGAGCCCATCCAGCCTGTGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
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| 3UTR-3UTR CCA 90 bp | CCTCGTTGCTATCCTGAGTGGGTTCAGGGATGGAGTGGCAGGCCCTCCTGGCACGGGCATCTGGCACTGTaGTCTGGCTTGCAGCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: PRCYPEWVQGWSGRPSWHGHLAL*SGLQLG Trigger: GCCCAGCTGCAAGCCAGACCACAGTGCCAGATGCCC...GTGCCAGGAGGGCCTGCCACTCCATCCCTGAACCCACTCAGGATAGCAACGAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| 3UTR-3UTR CCA 90 bp | GGTGGTCTCTCCACGGCCGGCTCGGCTCCGCTTCTTGAGTGTAGGTGTCAGGATGGGCATCTGGCACTGTaGTCTGGCTTGCAGCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: GGLSTAGSAPLLECRCQDGHLAL*SGLQLG Trigger: GCCCAGCTGCAAGCCAGACCACAGTGCCAGATGCCC...ATCCTGACACCTACACTCAAGAAGCGGAGCCGAGCCGGCCGTGGAGAGACCACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
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| 3UTR-3UTR TCA 90 bp | CTCAGACTGGGGAGGTTGAGGCATGTCTGGGGGCATCTGGCACTGTGGTCTGGCTCTTGGACTCAGGGCTaGGGCCACCTGTGTGAACCC | + |
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Preference number: 2 (lower is better) Translates to: LRLGRLRHVWGHLALWSGSWTQG*GHLCEP Trigger: GGGTTCACACAGGTGGCCTCAGCCCTGAGTCCAAGA...GCCAGACCACAGTGCCAGATGCCCCCAGACATGCCTCAACCTCCCCAGTCTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
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| 3UTR CAA 90 bp | TCCTCTGGCTTGGTGGTCTCTCCACGGCCGGCTCGGCTCCGCTTCTaGAGTGTAGGTGTCAGGATCTTCTTGGACTCAGGGCTGAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: SSGLVVSPRPARLRF*SVGVRIFLDSGLRP Trigger: TGGCCTCAGCCCTGAGTCCAAGAAGATCCTGACACCTACACTCAAGAAGCGGAGCCGAGCCGGCCGTGGAGAGACCACCAAGCCAGAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
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| 3UTR-3UTR CCA 90 bp | CCTCGTTGCTATCCTGAGTGGGTTCAGGGATGGAGTGGCAGGCCCTCCTGGCACTCTGGCACTGTGGTCTaGCTTGCAGCTGGGCAGGAT | + |
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Preference number: 2 (lower is better) Translates to: PRCYPEWVQGWSGRPSWHSGTVV*LAAGQD Trigger: ATCCTGCCCAGCTGCAAGCCAGACCACAGTGCCAGA...GTGCCAGGAGGGCCTGCCACTCCATCCCTGAACCCACTCAGGATAGCAACGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| 3UTR CAA 90 bp | GGGAGGTTGAGGCATGTCTGGGGGCATCTGGCACTGTGGTCTGGCTaGCAGCTGGGCAGGATGGTTCATTCAGGGAGTCTGTACCATGCG | + |
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Preference number: 2 (lower is better) Translates to: GRLRHVWGHLALWSG*QLGRMVHSGSLYHA Trigger: CGCATGGTACAGACTCCCTGAATGAACCATCCTGCCCAGCTGCAAGCCAGACCACAGTGCCAGATGCCCCCAGACATGCCTCAACCTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
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| 3UTR-3UTR TCA 90 bp | CGCTCCAACAGCTTGGGGTCAAACTGGGTGACACAGATGCCCAGTCGGTCCCCCGTCATCACGGTGCCTTaGCCCTTGATGGAGAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: RSNSLGSNWVTQMPSRSPVITVP*PLMEKQ Trigger: CTGCTTCTCCATCAAGGGTCAAGGCACCGTGATGAC...GGGGGACCGACTGGGCATCTGTGTCACCCAGTTTGACCCCAAGCTGTTGGAGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205014.2 |
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| 3UTR-3UTR GCA 90 bp | GCTAGTTGGGGCAAGGCTGAGTGGCTGCACACTCTTATCGGGGGAAGACCCAGGCACTGTGGTCTGGCTTaGAGCTGGGCAGGATGGTTC | + |
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Preference number: 2 (lower is better) Translates to: ASWGKAEWLHTLIGGRPRHCGLA*SWAGWF Trigger: GAACCATCCTGCCCAGCTGCAAGCCAGACCACAGTG...CCTGGGTCTTCCCCCGATAAGAGTGTGCAGCCACTCAGCCTTGCCCCAACTAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| 3UTR-3UTR CCA 90 bp | GGGTGCCAGCTAGTTGGGGCAAGGCTGAGTGGCTGCACACTCTTATCGGGGGAATCTGGCACTGTGGTCTaGCTTGCAGCTGGGCAGGAT | + |
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Preference number: 2 (lower is better) Translates to: GCQLVGARLSGCTLLSGESGTVV*LAAGQD Trigger: ATCCTGCCCAGCTGCAAGCCAGACCACAGTGCCAGA...TTCCCCCGATAAGAGTGTGCAGCCACTCAGCCTTGCCCCAACTAGCTGGCACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| 3UTR-3UTR CCA 90 bp | CTCGTTGCTATCCTGAGTGGGTTCAGGGATGGAGTGGCAGGCCCTCCTGGCACTATGCCTGGGAAGCCCTaGGAGACAGGCAGACTATGG | + |
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Preference number: 2 (lower is better) Translates to: LVAILSGFRDGVAGPPGTMPGKP*ETGRLW Trigger: CCATAGTCTGCCTGTCTCCCAGGGCTTCCCAGGCAT...AGTGCCAGGAGGGCCTGCCACTCCATCCCTGAACCCACTCAGGATAGCAACGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
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| 3UTR-3UTR TCA 90 bp | GACACAGATGCCCAGTCGGTCCCCCTGCATGGCAGAGGTGACGGGTGTATGGAACTTTCTTCACCACCTTaGGGGCAGGGATCTCCACAC | + |
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Preference number: 2 (lower is better) Translates to: DTDAQSVPLHGRGDGCMELSSPP*GQGSPH Trigger: GTGTGGAGATCCCTGCCCTCAAGGTGGTGAAGAAAG...TTCCATACACCCGTCACCTCTGCCATGCAGGGGGACCGACTGGGCATCTGTGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205014.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGTGCCAGCTAGTTGGGGCAAGGCTGAGTGGCTGCACACTCTTATCGGGGGAAGTGGCAGGCCCTCCTaGCACTGTTCCTCATTTTCC | + |
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Preference number: 2 (lower is better) Translates to: RVPASWGKAEWLHTLIGGSGRPS*HCSSFS Trigger: GGAAAATGAGGAACAGTGCCAGGAGGGCCTGCCACT...TCCCCCGATAAGAGTGTGCAGCCACTCAGCCTTGCCCCAACTAGCTGGCACCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| 3UTR-3UTR CCA 90 bp | TTATTTTCCGTTGGAGGGTGCCAGCTAGTTGGGGCAAGGCTGAGTGGCTGCACAGGTTCAGGGATGGAGTaGCAGGCCCTCCTGGCACTG | + |
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Preference number: 2 (lower is better) Translates to: LFSVGGCQLVGARLSGCTGSGME*QALLAL Trigger: CAGTGCCAGGAGGGCCTGCCACTCCATCCCTGAACC...TGTGCAGCCACTCAGCCTTGCCCCAACTAGCTGGCACCCTCCAACGGAAAATAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| 3UTR-3UTR CCA 90 bp | TGGAGGGTGCCAGCTAGTTGGGGCAAGGCTGAGTGGCTGCACACTCTTATCGGGCGTTGCTATCCTGAGTaGGTTCAGGGATGGAGTGGC | + |
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Preference number: 2 (lower is better) Translates to: WRVPASWGKAEWLHTLIGRCYPE*VQGWSG Trigger: GCCACTCCATCCCTGAACCCACTCAGGATAGCAACG...CCCGATAAGAGTGTGCAGCCACTCAGCCTTGCCCCAACTAGCTGGCACCCTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| 3UTR-3UTR CCA 90 bp | TTCAGGGATGGAGTGGCAGGCCCTCCTGGCACTGTTCCTCATTTTCCCCAGGTTAGGTTGAGGCATGTCTaGGGGCATCTGGCACTGTGG | + |
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Preference number: 2 (lower is better) Translates to: FRDGVAGPPGTVPHFPQVRLRHV*GHLALW Trigger: CCACAGTGCCAGATGCCCCCAGACATGCCTCAACCT...AACCTGGGGAAAATGAGGAACAGTGCCAGGAGGGCCTGCCACTCCATCCCTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| 3UTR-3UTR CCA 90 bp | TGCCAGCTAGTTGGGGCAAGGCTGAGTGGCTGCACACTCTTATCGGGGGAAGACAGTGGCAGGCCCTCCTaGCACTGTTCCTCATTTTCC | + |
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Preference number: 2 (lower is better) Translates to: CQLVGARLSGCTLLSGEDSGRPS*HCSSFS Trigger: GGAAAATGAGGAACAGTGCCAGGAGGGCCTGCCACT...GTCTTCCCCCGATAAGAGTGTGCAGCCACTCAGCCTTGCCCCAACTAGCTGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| 3UTR-3UTR CCA 90 bp | CAGCTAGTTGGGGCAAGGCTGAGTGGCTGCACACTCTTATCGGGGGAAGACCCACGTTGCTATCCTGAGTaGGTTCAGGGATGGAGTGGC | + |
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Preference number: 2 (lower is better) Translates to: QLVGARLSGCTLLSGEDPRCYPE*VQGWSG Trigger: GCCACTCCATCCCTGAACCCACTCAGGATAGCAACG...TGGGTCTTCCCCCGATAAGAGTGTGCAGCCACTCAGCCTTGCCCCAACTAGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| 3UTR-3UTR TCA 90 bp | TCTTCAAGGTCCACTGACAACATCCCAGGAGCCACTTGGTTGAACCTAGCAGCTGCAGTGGGATGGGGTTaGCTGCCTCAGACTGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: SSRSTDNIPGATWLNLAAAVGWG*LPQTGE Trigger: CTCCCCAGTCTGAGGCAGTCAACCCCATCCCACTGC...AGCTGCTAGGTTCAACCAAGTGGCTCCTGGGATGTTGTCAGTGGACCTTGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
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| 3UTR-3UTR CCA 90 bp | TTCCGTTGGAGGGTGCCAGCTAGTTGGGGCAAGGCTGAGTGGCTGCACACTCTTATCCCAGGAGCCACTTaGTTGAACCTAGCAGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: FRWRVPASWGKAEWLHTLIPGAT*LNLAAL Trigger: GAGAGCTGCTAGGTTCAACCAAGTGGCTCCTGGGAT...AAGAGTGTGCAGCCACTCAGCCTTGCCCCAACTAGCTGGCACCCTCCAACGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
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| 3UTR-3UTR GCA 90 bp | CCCTGGCCAGAGGACCCCAGGAAACTCAGCTGTTCAGAAAACCTCCATTCTTCACACTGTGGTCTGGCTTaGAGCTGGGCAGGATGGTTC | + |
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Preference number: 2 (lower is better) Translates to: PWPEDPRKLSCSENLHSSHCGLA*SWAGWF Trigger: GAACCATCCTGCCCAGCTGCAAGCCAGACCACAGTG...TGAAGAATGGAGGTTTTCTGAACAGCTGAGTTTCCTGGGGTCCTCTGGCCAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
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| 3UTR-3UTR CCA 90 bp | GGTGCACATACCAGCCCACGCTCCAACAGCTTGGGGTCAAACTGGGTGACACAGGAGGTGACGGGTGTATaGAACATCTGCATGGACTTC | + |
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Preference number: 2 (lower is better) Translates to: GAHTSPRSNSLGSNWVTQEVTGV*NICMDF Trigger: GAAGTCCATGCAGATGTTCCATACACCCGTCACCTC...CTGTGTCACCCAGTTTGACCCCAAGCTGTTGGAGCGTGGGCTGGTATGTGCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205014.2 |
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| 3UTR-3UTR TCA 90 bp | TACCATGCGCTTCTGGGTGTCAAAGACATAGCGCTTGAAAGACAGGTTGAGTGTGCAGTGGGATGGGGTTaGCTGCCTCAGACTGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: YHALLGVKDIALERQVECAVGWG*LPQTGE Trigger: CTCCCCAGTCTGAGGCAGTCAACCCCATCCCACTGC...ACACTCAACCTGTCTTTCAAGCGCTATGTCTTTGACACCCAGAAGCGCATGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
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| 3UTR-3UTR CCA 90 bp | ACATCTGCTCCCCTTACAGGTGTCTGGAAAAGCTCTGATTTCCTTCGTTGGTCAGAGTGGGTTCAGGGATaGAGTGGCAGGCCCTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: TSAPLTGVWKSSDFLRWSEWVQG*SGRPSW Trigger: CCAGGAGGGCCTGCCACTCCATCCCTGAACCCACTC...TGACCAACGAAGGAAATCAGAGCTTTTCCAGACACCTGTAAGGGGAGCAGATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
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| 3UTR-3UTR CCA 90 bp | CAGAGGACCCCAGGAAACTCAGCTGTTCAGAAAACCTCCATTCTTCAAGGTCCAAGGGTGCCAGCTAGTTaGGGCAAGGCTGAGTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: QRTPGNSAVQKTSILQGPRVPAS*GKAEWL Trigger: CAGCCACTCAGCCTTGCCCCAACTAGCTGGCACCCT...TGGACCTTGAAGAATGGAGGTTTTCTGAACAGCTGAGTTTCCTGGGGTCCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
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| 3UTR-3UTR TCA 90 bp | GTGACGGGTGTATGGAACATCTGCATGGACTTCACTTTCTTCACCACCTTGAGGCGGTGCCTTGACCCTTaGTGGAGAAGCAGTGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: VTGVWNICMDFTFFTTLRRCLDP*WRSSGP Trigger: TGGACCACTGCTTCTCCATCAAGGGTCAAGGCACCG...CCTCAAGGTGGTGAAGAAAGTGAAGTCCATGCAGATGTTCCATACACCCGTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205014.2 |
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| 3UTR-3UTR CCA 90 bp | CGCTCCAACAGCTTGGGGTCAAACTGGGTGACACAGATGCCCAGTCGGTCCCCCTATGGAACATCTGCATaGACTTCACTTTCTTCACCA | + |
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Preference number: 2 (lower is better) Translates to: RSNSLGSNWVTQMPSRSPYGTSA*TSLSSP Trigger: TGGTGAAGAAAGTGAAGTCCATGCAGATGTTCCATA...GGGGGACCGACTGGGCATCTGTGTCACCCAGTTTGACCCCAAGCTGTTGGAGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205014.2 |
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| 3UTR-3UTR CCA 90 bp | GACGGGTGTATGGAACATCTGCATGGACTTCACTTTCTTCACCACCTTGAGGGCTTGATGGAGAAGCAGTaGTCCACAGACATAAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: DGCMEHLHGLHFLHHLEGLMEKQ*STDIRN Trigger: ATTCCTTATGTCTGTGGACCACTGCTTCTCCATCAA...GCCCTCAAGGTGGTGAAGAAAGTGAAGTCCATGCAGATGTTCCATACACCCGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205014.2 |
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| 3UTR CCA 72 bp | GGATGGGCTCTGGCCGTTCAGTGCCCTCCTCTGGCTTaGTGGTCTCTCCACGGCCGGCTCGGCTCCGCTTCT | + |
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Preference number: 3 (lower is better) Translates to: GWALAVQCPPLA*WSLHGRLGSAS Trigger: AGAAGCGGAGCCGAGCCGGCCGTGGAGAGACCACCAAGCCAGAGGAGGGCACTGAACGGCCAGAGCCCATCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
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| 3UTR-3UTR CAA 90 bp | GCTGGATGGGCTCTGGCCGTTCAGTGCCCTCCTCTGGCTTGGTGGTCTCTCCACGGCAGTGGGATGGGGTaGACTGCCTCAGACTGGGGA | + |
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Preference number: 3 (lower is better) Translates to: AGWALAVQCPPLAWWSLHGSGMG*TASDWG Trigger: TCCCCAGTCTGAGGCAGTCAACCCCATCCCACTGCC...GTGGAGAGACCACCAAGCCAGAGGAGGGCACTGAACGGCCAGAGCCCATCCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
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| 3UTR TCA 72 bp | CCAGCCCACGCTCCAACAGCTTGGGGTCAAACTGGGTaGCACAGATGCCCAGTCGGTCCCCCTGCATGGCAG | + |
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Preference number: 3 (lower is better) Translates to: PAHAPTAWGQTG*HRCPVGPPAWQ Trigger: CTGCCATGCAGGGGGACCGACTGGGCATCTGTGTCACCCAGTTTGACCCCAAGCTGTTGGAGCGTGGGCTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205014.2 |
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| 3UTR-3UTR CAA 90 bp | CCTCAGACTGGGGAGGTTGAGGCATGTCTGGGGGCATCTGGCACTGTGGTCTGGGGCAGTGGGATGGGGTaGACTGCCTCAGACTGGGGA | + |
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Preference number: 3 (lower is better) Translates to: PQTGEVEACLGASGTVVWGSGMG*TASDWG Trigger: TCCCCAGTCTGAGGCAGTCAACCCCATCCCACTGCC...CCAGACCACAGTGCCAGATGCCCCCAGACATGCCTCAACCTCCCCAGTCTGAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| 3UTR-3UTR CAA 90 bp | TTCCGTTGGAGGGTGCCAGCTAGTTGGGGCAAGGCTGAGTGGCTGCACACTCTTGGGGGAAGACCCAGGTaGCTGGCTCTGCTAAGGCCA | + |
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Preference number: 3 (lower is better) Translates to: FRWRVPASWGKAEWLHTLGGRPR*LALLRP Trigger: TGGCCTTAGCAGAGCCAGCAACCTGGGTCTTCCCCC...AAGAGTGTGCAGCCACTCAGCCTTGCCCCAACTAGCTGGCACCCTCCAACGGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| 3UTR CCA 72 bp | GTTGACTGCCTCAGACTGGGGAGGTTGAGGCATGTCTaGGGGCATCTGGCACTGTGGTCTGGCTTGCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: VDCLRLGRLRHV*GHLALWSGLQL Trigger: CAGCTGCAAGCCAGACCACAGTGCCAGATGCCCCCAGACATGCCTCAACCTCCCCAGTCTGAGGCAGTCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| 3UTR CCA 72 bp | CATACCAGCCCACGCTCCAACAGCTTGGGGTCAAACTaGGTGACACAGATGCCCAGTCGGTCCCCCTGCATG | + |
|
Preference number: 3 (lower is better) Translates to: HTSPRSNSLGSN*VTQMPSRSPCM Trigger: CATGCAGGGGGACCGACTGGGCATCTGTGTCACCCAGTTTGACCCCAAGCTGTTGGAGCGTGGGCTGGTATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205014.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGCTGGGGCTGAAGATGAGCATGGAGAGGGTCCAGGTACTCCACCCCTGGTCTCCAGGAGCCACTTGGTaGAACCTAGCAGCTCTCGAG | + |
|
Preference number: 3 (lower is better) Translates to: VLGLKMSMERVQVLHPWSPGATW*NLAALE Trigger: CTCGAGAGCTGCTAGGTTCAACCAAGTGGCTCCTGG...AGACCAGGGGTGGAGTACCTGGACCCTCTCCATGCTCATCTTCAGCCCCAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
||
| 3UTR GCA 72 bp | GGCATGTCTGGGGGCATCTGGCACTGTGGTCTGGCTTaGAGCTGGGCAGGATGGTTCATTCAGGGAGTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: GMSGGIWHCGLA*SWAGWFIQGVC Trigger: ACAGACTCCCTGAATGAACCATCCTGCCCAGCTGCAAGCCAGACCACAGTGCCAGATGCCCCCAGACATGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| 3UTR CCA 72 bp | GAAAGACAGGTTGAGTGTCACAGGCTGGATGGGCTCTaGCCGTTCAGTGCCCTCCTCTGGCTTGGTGGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: ERQVECHRLDGL*PFSALLWLGGL Trigger: GAGACCACCAAGCCAGAGGAGGGCACTGAACGGCCAGAGCCCATCCAGCCTGTGACACTCAACCTGTCTTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| 3UTR CCA 72 bp | GTTGAGGCATGTCTGGGGGCATCTGGCACTGTGGTCTaGCTTGCAGCTGGGCAGGATGGTTCATTCAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: VEACLGASGTVV*LAAGQDGSFRE Trigger: CTCCCTGAATGAACCATCCTGCCCAGCTGCAAGCCAGACCACAGTGCCAGATGCCCCCAGACATGCCTCAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| 3UTR-3UTR CAA 90 bp | TGGCACTGTGGTCTGGCTTGCAGCTGGGCAGGATGGTTCATTCAGGGAGTCTGTGCACTGTGGTCTGGCTaGCAGCTGGGCAGGATGGTT | + |
|
Preference number: 3 (lower is better) Translates to: WHCGLACSWAGWFIQGVCALWSG*QLGRMV Trigger: AACCATCCTGCCCAGCTGCAAGCCAGACCACAGTGC...ACAGACTCCCTGAATGAACCATCCTGCCCAGCTGCAAGCCAGACCACAGTGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| 3UTR-3UTR CAA 90 bp | CTAGTAGGCCTCGTTGCTATCCTGAGTGGGTTCAGGGATGGAGTGGCAGGCCCTGGTGTCAGGATCTTCTaGGACTCAGGGCTGAGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: LVGLVAILSGFRDGVAGPGVRIF*DSGLRP Trigger: TGGCCTCAGCCCTGAGTCCAAGAAGATCCTGACACC...AGGGCCTGCCACTCCATCCCTGAACCCACTCAGGATAGCAACGAGGCCTACTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| 3UTR-3UTR CAA 90 bp | GTTCTATCCTCTTGCCCCTATCTCAGTCCCCATGCTAAGCTTGAGGGTGCTGGGGCACTGTGGTCTGGCTaGCAGCTGGGCAGGATGGTT | + |
|
Preference number: 3 (lower is better) Translates to: VLSSCPYLSPHAKLEGAGALWSG*QLGRMV Trigger: AACCATCCTGCCCAGCTGCAAGCCAGACCACAGTGC...CCCAGCACCCTCAAGCTTAGCATGGGGACTGAGATAGGGGCAAGAGGATAGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
||
| 3UTR-3UTR CAA 90 bp | GTCAAACTGGGTGACACAGATGCCCAGTCGGTCCCCCTGCATGGCAGAGGTGACACTTTCTTCACCACCTaGAGGGCAGGGATCTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: VKLGDTDAQSVPLHGRGDTFFTT*RAGIST Trigger: TGTGGAGATCCCTGCCCTCAAGGTGGTGAAGAAAGT...GTCACCTCTGCCATGCAGGGGGACCGACTGGGCATCTGTGTCACCCAGTTTGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205014.2 |
||
| 3UTR GCA 72 bp | TCAAACTGGGTGACACAGATGCCCAGTCGGTCCCCCTaGATGGCAGAGGTGACGGGTGTATGGAACATCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SNWVTQMPSRSP*MAEVTGVWNIC Trigger: GCAGATGTTCCATACACCCGTCACCTCTGCCATGCAGGGGGACCGACTGGGCATCTGTGTCACCCAGTTTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205014.2 |
||
| 3UTR CCA 72 bp | AGGCCATTTTCTAGTAGGCCTCGTTGCTATCCTGAGTaGGTTCAGGGATGGAGTGGCAGGCCCTCCTGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: RPFSSRPRCYPE*VQGWSGRPSWH Trigger: GTGCCAGGAGGGCCTGCCACTCCATCCCTGAACCCACTCAGGATAGCAACGAGGCCTACTAGAAAATGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| 3UTR CCA 72 bp | GCCCTAAACCCAATGCACACAACTCCCTGTGATGCCTaGGAAGCCCTGGGAGACAGGCAGACTATGGGCACA | + |
|
Preference number: 3 (lower is better) Translates to: ALNPMHTTPCDA*EALGDRQTMGT Trigger: TGTGCCCATAGTCTGCCTGTCTCCCAGGGCTTCCCAGGCATCACAGGGAGTTGTGTGCATTGGGTTTAGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
||
| 3UTR CCA 72 bp | TCTGGGGGCATCTGGCACTGTGGTCTGGCTTGCAGCTaGGCAGGATGGTTCATTCAGGGAGTCTGTACCATG | + |
|
Preference number: 3 (lower is better) Translates to: SGGIWHCGLACS*AGWFIQGVCTM Trigger: CATGGTACAGACTCCCTGAATGAACCATCCTGCCCAGCTGCAAGCCAGACCACAGTGCCAGATGCCCCCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| 3UTR TCA 72 bp | GGGCTCAATAACAGTGCAATGGCAGTGGGATGGGGTTaGCTGCCTCAGACTGGGGAGGTTGAGGCATGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: GLNNSAMAVGWG*LPQTGEVEACL Trigger: CAGACATGCCTCAACCTCCCCAGTCTGAGGCAGTCAACCCCATCCCACTGCCATTGCACTGTTATTGAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| 3UTR TCA 72 bp | CTCTCGAGCCCTAAACCCAATGCACACAACTCCCTGTaGTGCCTGGGAAGCCCTGGGAGACAGGCAGACTAT | + |
|
Preference number: 3 (lower is better) Translates to: LSSPKPNAHNSL*CLGSPGRQADY Trigger: ATAGTCTGCCTGTCTCCCAGGGCTTCCCAGGCATCACAGGGAGTTGTGTGCATTGGGTTTAGGGCTCGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
||
| 3UTR TCA 72 bp | AGGGATCTCCACACTGTCCCCAAGGCTGATAGTGCCTaGGAGGATAGTCCCAGTCATCACGGTGCCTTGACC | + |
|
Preference number: 3 (lower is better) Translates to: RDLHTVPKADSA*EDSPSHHGALT Trigger: GGTCAAGGCACCGTGATGACTGGGACTATCCTCTCAGGCACTATCAGCCTTGGGGACAGTGTGGAGATCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205014.2 |
||
| 3UTR TCA 72 bp | CACAGATGCCCAGTCGGTCCCCCTGCATGGCAGAGGTaGCGGGTGTATGGAACATCTGCATGGACTTCACTT | + |
|
Preference number: 3 (lower is better) Translates to: HRCPVGPPAWQR*RVYGTSAWTSL Trigger: AAGTGAAGTCCATGCAGATGTTCCATACACCCGTCACCTCTGCCATGCAGGGGGACCGACTGGGCATCTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205014.2 |
||
| 3UTR GCA 72 bp | TCAATAACAGTGCAATGGCAGTGGGATGGGGTTGACTaGCTCAGACTGGGGAGGTTGAGGCATGTCTGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: SITVQWQWDGVD*LRLGRLRHVWG Trigger: CCCCCAGACATGCCTCAACCTCCCCAGTCTGAGGCAGTCAACCCCATCCCACTGCCATTGCACTGTTATTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| 3UTR CCA 72 bp | AGTAGGCCTCGTTGCTATCCTGAGTGGGTTCAGGGATaGAGTGGCAGGCCCTCCTGGCACTGTTCCTCATTT | + |
|
Preference number: 3 (lower is better) Translates to: SRPRCYPEWVQG*SGRPSWHCSSF Trigger: AAATGAGGAACAGTGCCAGGAGGGCCTGCCACTCCATCCCTGAACCCACTCAGGATAGCAACGAGGCCTACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| 3UTR-3UTR CAA 90 bp | TCCACACTGTCCCCAAGGCTGATAGTGCCTGAGAGGATAGTCCCAGTCATCACGCAGAGGGGTCTCTCGTaGGGATGGAAATCTGGGACT | + |
|
Preference number: 3 (lower is better) Translates to: STLSPRLIVPERIVPVITQRGLS*GWKSGT Trigger: AGTCCCAGATTTCCATCCCAACGAGAGACCCCTCTG...CGTGATGACTGGGACTATCCTCTCAGGCACTATCAGCCTTGGGGACAGTGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205014.2 |
||
| 3UTR CCA 72 bp | GGGATGTTTATTTTCCGTTGGAGGGTGCCAGCTAGTTaGGGCAAGGCTGAGTGGCTGCACACTCTTATCGGG | + |
|
Preference number: 3 (lower is better) Translates to: GMFIFRWRVPAS*GKAEWLHTLIG Trigger: CCCGATAAGAGTGTGCAGCCACTCAGCCTTGCCCCAACTAGCTGGCACCCTCCAACGGAAAATAAACATCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| 3UTR-3UTR CAA 90 bp | TTCCTTCGTTGGTCAGTTCTATCCTCTTGCCCCTATCTCAGTCCCCATGCTAAGGGAGGCCAGGGCCTATaGACCTCTCGTGCAAGGATG | + |
|
Preference number: 3 (lower is better) Translates to: FLRWSVLSSCPYLSPHAKGGQGL*TSRARM Trigger: CATCCTTGCACGAGAGGTCAATAGGCCCTGGCCTCC...CTTAGCATGGGGACTGAGATAGGGGCAAGAGGATAGAACTGACCAACGAAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
||
| 3UTR-3UTR CAA 90 bp | GCAGGATGGTTCATTCAGGGAGTCTGTACCATGCGCTTCTGGGTGTCAAAGACAGCTCGGCTCCGCTTCTaGAGTGTAGGTGTCAGGATC | + |
|
Preference number: 3 (lower is better) Translates to: AGWFIQGVCTMRFWVSKTARLRF*SVGVRI Trigger: GATCCTGACACCTACACTCAAGAAGCGGAGCCGAGC...TGTCTTTGACACCCAGAAGCGCATGGTACAGACTCCCTGAATGAACCATCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| 3UTR TCA 72 bp | GAGTCCATGGTTCCAAAAATGGAGGCCAGGGCCTATTaGCCTCTCGTGCAAGGATGGAACCCCAGGGTACTA | + |
|
Preference number: 3 (lower is better) Translates to: ESMVPKMEARAY*PLVQGWNPRVL Trigger: TAGTACCCTGGGGTTCCATCCTTGCACGAGAGGTCAATAGGCCCTGGCCTCCATTTTTGGAACCATGGACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
||
| 3UTR TCA 72 bp | GTGCCTGAGAGGATAGTCCCAGTCATCACGGTGCCTTaGCCCTTGATGGAGAAGCAGTGGTCCACAGACATA | + |
|
Preference number: 3 (lower is better) Translates to: VPERIVPVITVP*PLMEKQWSTDI Trigger: TATGTCTGTGGACCACTGCTTCTCCATCAAGGGTCAAGGCACCGTGATGACTGGGACTATCCTCTCAGGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205014.2 |
||
| 3UTR GCA 72 bp | AGGTCACATATGGGATGTTTATTTTCCGTTGGAGGGTaGCAGCTAGTTGGGGCAAGGCTGAGTGGCTGCACA | + |
|
Preference number: 3 (lower is better) Translates to: RSHMGCLFSVGG*QLVGARLSGCT Trigger: TGTGCAGCCACTCAGCCTTGCCCCAACTAGCTGGCACCCTCCAACGGAAAATAAACATCCCATATGTGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
||
| 3UTR TCA 72 bp | CAGCTGTTCAGAAAACCTCCATTCTTCAAGGTCCACTaGCAACATCCCAGGAGCCACTTGGTTGAACCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: QLFRKPPFFKVH*QHPRSHLVEPS Trigger: GCTAGGTTCAACCAAGTGGCTCCTGGGATGTTGTCAGTGGACCTTGAAGAATGGAGGTTTTCTGAACAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
||
| 3UTR TCA 72 bp | GACATCTGCTCCCCTTACAGGTGTCTGGAAAAGCTCTaGTTTCCTTCGTTGGTCAGTTCTATCCTCTTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: DICSPYRCLEKL*FPSLVSSILLP Trigger: GGGCAAGAGGATAGAACTGACCAACGAAGGAAATCAGAGCTTTTCCAGACACCTGTAAGGGGAGCAGATGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
||
| 3UTR CCA 72 bp | CTTACAGGTGTCTGGAAAAGCTCTGATTTCCTTCGTTaGTCAGTTCTATCCTCTTGCCCCTATCTCAGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LTGVWKSSDFLR*SVLSSCPYLSP Trigger: GGGACTGAGATAGGGGCAAGAGGATAGAACTGACCAACGAAGGAAATCAGAGCTTTTCCAGACACCTGTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
||
| 3UTR CCA 72 bp | AGAAACATTGGGACATCTGCTCCCCTTACAGGTGTCTaGAAAAGCTCTGATTTCCTTCGTTGGTCAGTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: RNIGTSAPLTGV*KSSDFLRWSVL Trigger: TAGAACTGACCAACGAAGGAAATCAGAGCTTTTCCAGACACCTGTAAGGGGAGCAGATGTCCCAATGTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
||
| CDS-3UTR GCA 90 bp | GATGGGCTCTGGCCGTTCAGTGCCCTCCTCTGGCTTGGTGGTCTCTCCACGGCCCCGCGCTCGCGGCTCTaGGGCTGCTTGTCGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: DGLWPFSALLWLGGLSTAPRSRL*GCLSKA Trigger: TGCCTTCGACAAGCAGCCGCAGAGCCGCGAGCGCGG...GGCCGTGGAGAGACCACCAAGCCAGAGGAGGGCACTGAACGGCCAGAGCCCATC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| CDS-3UTR GCA 90 bp | AGTGCCCTCCTCTGGCTTGGTGGTCTCTCCACGGCCGGCTCGGCTCCGCTTCTTCCAGGTCGAGCGTTATaGCGCGCTCGCGGCTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: SALLWLGGLSTAGSAPLLPGRAL*RARGSA Trigger: CGCAGAGCCGCGAGCGCGGCATAACGCTCGACCTGG...AAGAAGCGGAGCCGAGCCGGCCGTGGAGAGACCACCAAGCCAGAGGAGGGCACT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| CDS-3UTR GCA 90 bp | CTCAGACTGGGGAGGTTGAGGCATGTCTGGGGGCATCTGGCACTGTGGTCTGGCTCTACCAGGGCCCACTaGTGCCGGGGGCAGTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LRLGRLRHVWGHLALWSGSTRAH*CRGQWP Trigger: GGGCCACTGCCCCCGGCAGCAGTGGGCCCTGGTAGA...GCCAGACCACAGTGCCAGATGCCCCCAGACATGCCTCAACCTCCCCAGTCTGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR GCA 90 bp | GCTAGTTGGGGCAAGGCTGAGTGGCTGCACACTCTTATCGGGGGAAGACCCAGGCCGCGCTCGCGGCTCTaGGGCTGCTTGTCGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ASWGKAEWLHTLIGGRPRPRSRL*GCLSKA Trigger: TGCCTTCGACAAGCAGCCGCAGAGCCGCGAGCGCGG...CCTGGGTCTTCCCCCGATAAGAGTGTGCAGCCACTCAGCCTTGCCCCAACTAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR GCA 90 bp | ACACAGATGCCCAGTCGGTCCCCCTGCATGGCAGAGGTGACGGGTGTATGGAACCGGATGAGGGAGGCGTaGCCGGGGCAGTCGACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TQMPSRSPCMAEVTGVWNRMREA*PGQSTS Trigger: ACTGGTCGACTGCCCCGGGCACGCCTCCCTCATCCG...GTTCCATACACCCGTCACCTCTGCCATGCAGGGGGACCGACTGGGCATCTGTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205014.2 |
||
| CDS-3UTR CCA 90 bp | GGTGCACATACCAGCCCACGCTCCAACAGCTTGGGGTCAAACTGGGTGACACAGCAGCAGTGGAGGCCGTaGTGCTCAGCGCGCGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GAHTSPRSNSLGSNWVTQQQWRP*CSARAP Trigger: TGGCGCGCGCGCTGAGCACCACGGCCTCCACTGCTG...CTGTGTCACCCAGTTTGACCCCAAGCTGTTGGAGCGTGGGCTGGTATGTGCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205014.2 |
||
| CDS-3UTR GCA 90 bp | AAGGCTGAGTGGCTGCACACTCTTATCGGGGGAAGACCCAGGTTGCTGGCTCTGCGGATGAGGGAGGCGTaGCCGGGGCAGTCGACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KAEWLHTLIGGRPRLLALRMREA*PGQSTS Trigger: ACTGGTCGACTGCCCCGGGCACGCCTCCCTCATCCG...CAGAGCCAGCAACCTGGGTCTTCCCCCGATAAGAGTGTGCAGCCACTCAGCCTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR GCA 90 bp | CTGAGTGGGTTCAGGGATGGAGTGGCAGGCCCTCCTGGCACTGTTCCTCATTTTTCTACCAGGGCCCACTaGTGCCGGGGGCAGTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LSGFRDGVAGPPGTVPHFSTRAH*CRGQWP Trigger: GGGCCACTGCCCCCGGCAGCAGTGGGCCCTGGTAGA...AAAATGAGGAACAGTGCCAGGAGGGCCTGCCACTCCATCCCTGAACCCACTCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR CCA 90 bp | GGCTTGCAGCTGGGCAGGATGGTTCATTCAGGGAGTCTGTACCATGCGCTTCTGCAGCAGTGGAGGCCGTaGTGCTCAGCGCGCGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLQLGRMVHSGSLYHALLQQWRP*CSARAP Trigger: TGGCGCGCGCGCTGAGCACCACGGCCTCCACTGCTG...CAGAAGCGCATGGTACAGACTCCCTGAATGAACCATCCTGCCCAGCTGCAAGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| CDS-3UTR GCA 90 bp | ACATACCAGCCCACGCTCCAACAGCTTGGGGTCAAACTGGGTGACACAGATGCCCCGCGCTCGCGGCTCTaGGGCTGCTTGTCGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TYQPTLQQLGVKLGDTDAPRSRL*GCLSKA Trigger: TGCCTTCGACAAGCAGCCGCAGAGCCGCGAGCGCGG...GGCATCTGTGTCACCCAGTTTGACCCCAAGCTGTTGGAGCGTGGGCTGGTATGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205014.2 |
||
| CDS-3UTR GCA 90 bp | CTGAGTGGGTTCAGGGATGGAGTGGCAGGCCCTCCTGGCACTGTTCCTCATTTTCCAGGTCGAGCGTTATaGCGCGCTCGCGGCTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: LSGFRDGVAGPPGTVPHFPGRAL*RARGSA Trigger: CGCAGAGCCGCGAGCGCGGCATAACGCTCGACCTGG...AAAATGAGGAACAGTGCCAGGAGGGCCTGCCACTCCATCCCTGAACCCACTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR GCA 90 bp | GCCGTTCAGTGCCCTCCTCTGGCTTGGTGGTCTCTCCACGGCCGGCTCGGCTCCTGGGCATGGAATCCTTaGACAGGTACTGCTCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AVQCPPLAWWSLHGRLGSWAWNP*TGTALG Trigger: TCCAAGAGCAGTACCTGTGCAAGGATTCCATGCCCA...GGAGCCGAGCCGGCCGTGGAGAGACCACCAAGCCAGAGGAGGGCACTGAACGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| CDS-3UTR CCA 90 bp | AGGGAGGCCTTCACGTCTGTCTGGAGGCCAAACCGAGAAACATTGGGACATCTGCAGCAGTGGAGGCCGTaGTGCTCAGCGCGCGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: REAFTSVWRPNRETLGHLQQWRP*CSARAP Trigger: TGGCGCGCGCGCTGAGCACCACGGCCTCCACTGCTG...CAGATGTCCCAATGTTTCTCGGTTTGGCCTCCAGACAGACGTGAAGGCCTCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
||
| CDS-3UTR TCA 90 bp | TTGGTGGTCTCTCCACGGCCGGCTCGGCTCCGCTTCTTGAGTGTAGGTGTCAGGCGGTGCCTTGACCCTTaGTGGAGAAGCAGTGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LVVSPRPARLRFLSVGVRRCLDP*WRSSGP Trigger: TGGACCACTGCTTCTCCATCAAGGGTCAAGGCACCG...CCTGACACCTACACTCAAGAAGCGGAGCCGAGCCGGCCGTGGAGAGACCACCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| CDS-3UTR TCA 90 bp | TGGAGGGTGCCAGCTAGTTGGGGCAAGGCTGAGTGGCTGCACACTCTTATCGGGTGTCAGGAGCAGGGCTaGAGAACAGCGTGCGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: WRVPASWGKAEWLHTLIGCQEQG*RTACDP Trigger: TGGGTCGCACGCTGTTCTTCAGCCCTGCTCCTGACA...CCCGATAAGAGTGTGCAGCCACTCAGCCTTGCCCCAACTAGCTGGCACCCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR TCA 90 bp | AGTAGGCCTCGTTGCTATCCTGAGTGGGTTCAGGGATGGAGTGGCAGGCCCTCCTCTTGGACTCAGGGCTaGGGCCACCAGGGATGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRPRCYPEWVQGWSGRPSSWTQG*GHQGCG Trigger: TCCACATCCCTGGTGGCCTCAGCCCTGAGTCCAAGA...GGAGGGCCTGCCACTCCATCCCTGAACCCACTCAGGATAGCAACGAGGCCTACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
||
| CDS-3UTR GCA 90 bp | GAGGTTGAGGCATGTCTGGGGGCATCTGGCACTGTGGTCTGGCTTGCAGCTGGGGCGCCAGCGCTGTTTTaGCACTGTCGATGTGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: EVEACLGASGTVVWLAAGAPALF*HCRCDP Trigger: TGGGTCACATCGACAGTGGCAAAACAGCGCTGGCGC...CCCAGCTGCAAGCCAGACCACAGTGCCAGATGCCCCCAGACATGCCTCAACCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR GCA 90 bp | CCTCAGACTGGGGAGGTTGAGGCATGTCTGGGGGCATCTGGCACTGTGGTCTGGTCCCCCAGGTTTGGCTaGCACGGGAATAATCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PQTGEVEACLGASGTVVWSPRFG*HGNNRC Trigger: GCACCGATTATTCCCGTGGCAGCCAAACCTGGGGGA...CCAGACCACAGTGCCAGATGCCCCCAGACATGCCTCAACCTCCCCAGTCTGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR CCA 90 bp | TCTGGCCGTTCAGTGCCCTCCTCTGGCTTGGTGGTCTCTCCACGGCCGGCTCGGAGAGGGGTCTCTCGTTaGGATGGAAATCTGGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: SGRSVPSSGLVVSPRPARRGVSR*DGNLGL Trigger: AAGTCCCAGATTTCCATCCCAACGAGAGACCCCTCT...CCGAGCCGGCCGTGGAGAGACCACCAAGCCAGAGGAGGGCACTGAACGGCCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| CDS-3UTR TCA 90 bp | GCTAGTTGGGGCAAGGCTGAGTGGCTGCACACTCTTATCGGGGGAAGACCCAGGCGGTGCCTTGACCCTTaGTGGAGAAGCAGTGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ASWGKAEWLHTLIGGRPRRCLDP*WRSSGP Trigger: TGGACCACTGCTTCTCCATCAAGGGTCAAGGCACCG...CCTGGGTCTTCCCCCGATAAGAGTGTGCAGCCACTCAGCCTTGCCCCAACTAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR TCA 90 bp | CCTCGTTGCTATCCTGAGTGGGTTCAGGGATGGAGTGGCAGGCCCTCCTGGCACGTCATCACGGTGCCTTaGCCCTTGATGGAGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PRCYPEWVQGWSGRPSWHVITVP*PLMEKQ Trigger: CTGCTTCTCCATCAAGGGTCAAGGCACCGTGATGAC...GTGCCAGGAGGGCCTGCCACTCCATCCCTGAACCCACTCAGGATAGCAACGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR TCA 90 bp | GGGGAGGTTGAGGCATGTCTGGGGGCATCTGGCACTGTGGTCTGGCTTGCAGCTCTTTCTTCACCACCTTaGGGGCAGGGATCTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: GEVEACLGASGTVVWLAALSSPP*GQGSPH Trigger: GTGTGGAGATCCCTGCCCTCAAGGTGGTGAAGAAAG...AGCTGCAAGCCAGACCACAGTGCCAGATGCCCCCAGACATGCCTCAACCTCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR TCA 90 bp | CTCTGGCTTGGTGGTCTCTCCACGGCCGGCTCGGCTCCGCTTCTTGAGTGTAGGTCTCATGGCCAACGGTaGTATGGAACTTGGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LWLGGLSTAGSAPLLECRSHGQR*YGTWPW Trigger: CCAAGGCCAAGTTCCATATCACCGTTGGCCATGAGA...CCTACACTCAAGAAGCGGAGCCGAGCCGGCCGTGGAGAGACCACCAAGCCAGAG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| CDS-3UTR TCA 90 bp | CCACGGCCGGCTCGGCTCCGCTTCTTGAGTGTAGGTGTCAGGATCTTCTTGGACCGAAGGCACTGTCGATaGTACCCTGTTCCCCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PRPARLRFLSVGVRIFLDRRHCR*YPVPLW Trigger: CCACAGGGGAACAGGGTATCATCGACAGTGCCTTCG...GTCCAAGAAGATCCTGACACCTACACTCAAGAAGCGGAGCCGAGCCGGCCGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| CDS-3UTR GCA 90 bp | TTGGGGTCAAACTGGGTGACACAGATGCCCAGTCGGTCCCCCTGCATGGCAGAGGCGCCAGCGCTGTTTTaGCACTGTCGATGTGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGSNWVTQMPSRSPCMAEAPALF*HCRCDP Trigger: TGGGTCACATCGACAGTGGCAAAACAGCGCTGGCGC...CTCTGCCATGCAGGGGGACCGACTGGGCATCTGTGTCACCCAGTTTGACCCCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000205014.2 |
||
| CDS-3UTR GCA 90 bp | CTCGTTGCTATCCTGAGTGGGTTCAGGGATGGAGTGGCAGGCCCTCCTGGCACTTCCCCCAGGTTTGGCTaGCACGGGAATAATCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LVAILSGFRDGVAGPPGTSPRFG*HGNNRC Trigger: GCACCGATTATTCCCGTGGCAGCCAAACCTGGGGGA...AGTGCCAGGAGGGCCTGCCACTCCATCCCTGAACCCACTCAGGATAGCAACGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR GCA 90 bp | ACACAGATGCCCAGTCGGTCCCCCTGCATGGCAGAGGTGACGGGTGTATGGAACTCCCCCAGGTTTGGCTaGCACGGGAATAATCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TQMPSRSPCMAEVTGVWNSPRFG*HGNNRC Trigger: GCACCGATTATTCCCGTGGCAGCCAAACCTGGGGGA...GTTCCATACACCCGTCACCTCTGCCATGCAGGGGGACCGACTGGGCATCTGTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000205014.2 |
||
| CDS-3UTR GCA 90 bp | CTCTGGCTTGGTGGTCTCTCCACGGCCGGCTCGGCTCCGCTTCTTGAGTGTAGGTTGTCCTCCAGCCCTTaGAGCAAGACACCATGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LWLGGLSTAGSAPLLECRLSSSP*SKTPWK Trigger: CTTCCATGGTGTCTTGCTGCAAGGGCTGGAGGACAA...CCTACACTCAAGAAGCGGAGCCGAGCCGGCCGTGGAGAGACCACCAAGCCAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| CDS-3UTR CCA 90 bp | ACATACCAGCCCACGCTCCAACAGCTTGGGGTCAAACTGGGTGACACAGATGCCTGTCGAAGGCAGCAGTaGAGGCCGTGGTGCTCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: TYQPTLQQLGVKLGDTDACRRQQ*RPWCSA Trigger: CGCTGAGCACCACGGCCTCCACTGCTGCCTTCGACA...GGCATCTGTGTCACCCAGTTTGACCCCAAGCTGTTGGAGCGTGGGCTGGTATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205014.2 |
||
| CDS-3UTR CCA 90 bp | AGTGCCCTCCTCTGGCTTGGTGGTCTCTCCACGGCCGGCTCGGCTCCGCTTCTTGGTCTCTCGTTGGGATaGAAATCTGGGACTTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SALLWLGGLSTAGSAPLLGLSLG*KSGTSG Trigger: TCCTGAAGTCCCAGATTTCCATCCCAACGAGAGACC...AAGAAGCGGAGCCGAGCCGGCCGTGGAGAGACCACCAAGCCAGAGGAGGGCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| CDS-3UTR CCA 90 bp | CAGGCTGGATGGGCTCTGGCCGTTCAGTGCCCTCCTCTGGCTTGGTGGTCTCTCCACCTTCTGTGGCTGTaGGCATGGAATCCTTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: QAGWALAVQCPPLAWWSLHLLWL*AWNPCT Trigger: TGTGCAAGGATTCCATGCCCACAGCCACAGAAGGTG...GAGAGACCACCAAGCCAGAGGAGGGCACTGAACGGCCAGAGCCCATCCAGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| CDS-3UTR CCA 90 bp | AGACTGGGGAGGTTGAGGCATGTCTGGGGGCATCTGGCACTGTGGTCTGGCTTGTTCAGTGCCCTCCTCTaGCTTGGTGGTCTCTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: RLGRLRHVWGHLALWSGLFSALL*LGGLST Trigger: CGTGGAGAGACCACCAAGCCAGAGGAGGGCACTGAA...CAAGCCAGACCACAGTGCCAGATGCCCCCAGACATGCCTCAACCTCCCCAGTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
||
| CDS-3UTR CCA 90 bp | TTCAGGGATGGAGTGGCAGGCCCTCCTGGCACTGTTCCTCATTTTCCCCAGGTTAGGCTGGATGGGCTCTaGCCGTTCAGTGCCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FRDGVAGPPGTVPHFPQVRLDGL*PFSALL Trigger: GAGGAGGGCACTGAACGGCCAGAGCCCATCCAGCCT...AACCTGGGGAAAATGAGGAACAGTGCCAGGAGGGCCTGCCACTCCATCCCTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
||
| 3UTR CAA 72 bp | AGAGGGTCCAGGTACTCCACCCCTGGTCTAGCACCCTaGGGAGTCCATGGTTCCAAAAATGGAGGCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RGSRYSTPGLAP*GVHGSKNGGQG Trigger: GCCCTGGCCTCCATTTTTGGAACCATGGACTCCCAAGGGTGCTAGACCAGGGGTGGAGTACCTGGACCCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
||
| 3UTR CAA 72 bp | TTGGTGGTCTCTCCACGGCCGGCTCGGCTCCGCTTCTaGAGTGTAGGTGTCAGGATCTTCTTGGACTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LVVSPRPARLRF*SVGVRIFLDSG Trigger: CCCTGAGTCCAAGAAGATCCTGACACCTACACTCAAGAAGCGGAGCCGAGCCGGCCGTGGAGAGACCACCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| 3UTR CAA 72 bp | AGGCATGTCTGGGGGCATCTGGCACTGTGGTCTGGCTaGCAGCTGGGCAGGATGGTTCATTCAGGGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RHVWGHLALWSG*QLGRMVHSGSL Trigger: CAGACTCCCTGAATGAACCATCCTGCCCAGCTGCAAGCCAGACCACAGTGCCAGATGCCCCCAGACATGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| CDS-3UTR TCA 90 bp | TTCCGTTGGAGGGTGCCAGCTAGTTGGGGCAAGGCTGAGTGGCTGCACACTCTTTGGGGTCAAACTGGGTaGCACAGATGCCCAGTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: FRWRVPASWGKAEWLHTLWGQTG*HRCPVG Trigger: ACCGACTGGGCATCTGTGTCACCCAGTTTGACCCCA...AAGAGTGTGCAGCCACTCAGCCTTGCCCCAACTAGCTGGCACCCTCCAACGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| CDS-3UTR GCA 90 bp | GATAGTCCCAGTCATCACGGTGCCTTGACCCTTGATGGAGAAGCAGTGGTCCACTCGCGGCTCTGCGGCTaGTTGTCGAAGGCAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: DSPSHHGALTLDGEAVVHSRLCG*LSKAAV Trigger: CACTGCTGCCTTCGACAAGCAGCCGCAGAGCCGCGA...GTGGACCACTGCTTCTCCATCAAGGGTCAAGGCACCGTGATGACTGGGACTATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205014.2 |
||
| CDS-3UTR GCA 90 bp | ACAGACATAAGGAATGGTCCAGAGGGGTCTCTCGTTGGGATGGAAATCTGGGACCCAGGTCGAGCGTTATaGCGCGCTCGCGGCTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: TDIRNGPEGSLVGMEIWDPGRAL*RARGSA Trigger: CGCAGAGCCGCGAGCGCGGCATAACGCTCGACCTGG...GTCCCAGATTTCCATCCCAACGAGAGACCCCTCTGGACCATTCCTTATGTCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205014.2 |
||
| CDS-3UTR GCA 90 bp | GGATGGGCTCTGGCCGTTCAGTGCCCTCCTCTGGCTTGGTGGTCTCTCCACGGCCATTTTGTCAATCGCTaGCTGTCTCTTCCCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GWALAVQCPPLAWWSLHGHFVNR*LSLPFC Trigger: GCAGAAGGGAAGAGACAGGCAGCGATTGACAAAATG...GCCGTGGAGAGACCACCAAGCCAGAGGAGGGCACTGAACGGCCAGAGCCCATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| CDS-3UTR GCA 90 bp | CCTCAGACTGGGGAGGTTGAGGCATGTCTGGGGGCATCTGGCACTGTGGTCTGGCACAGAGATGAGGGCTaGGTGAACAGTGTGCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PQTGEVEACLGASGTVVWHRDEG*VNSVQR Trigger: TCTCTGCACACTGTTCACGCAGCCCTCATCTCTGTG...CCAGACCACAGTGCCAGATGCCCCCAGACATGCCTCAACCTCCCCAGTCTGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR GCA 90 bp | GAGGTTGAGGCATGTCTGGGGGCATCTGGCACTGTGGTCTGGCTTGCAGCTGGGCACAGAGATGAGGGCTaGGTGAACAGTGTGCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EVEACLGASGTVVWLAAGHRDEG*VNSVQR Trigger: TCTCTGCACACTGTTCACGCAGCCCTCATCTCTGTG...CCCAGCTGCAAGCCAGACCACAGTGCCAGATGCCCCCAGACATGCCTCAACCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR GCA 90 bp | CCTCGTTGCTATCCTGAGTGGGTTCAGGGATGGAGTGGCAGGCCCTCCTGGCACTTGTCCTCCAGCCCTTaGAGCAAGACACCATGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PRCYPEWVQGWSGRPSWHLSSSP*SKTPWK Trigger: CTTCCATGGTGTCTTGCTGCAAGGGCTGGAGGACAA...GTGCCAGGAGGGCCTGCCACTCCATCCCTGAACCCACTCAGGATAGCAACGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| CDS-3UTR GCA 90 bp | GATGGGCTCTGGCCGTTCAGTGCCCTCCTCTGGCTTGGTGGTCTCTCCACGGCCCTTGTAAACCCTCAGTaGTGGCAGGAAGCTCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: DGLWPFSALLWLGGLSTALVNPQ*WQEALN Trigger: ATTGAGAGCTTCCTGCCAGCACTGAGGGTTTACAAG...GGCCGTGGAGAGACCACCAAGCCAGAGGAGGGCACTGAACGGCCAGAGCCCATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| CDS-3UTR CCA 90 bp | CTCAGACTGGGGAGGTTGAGGCATGTCTGGGGGCATCTGGCACTGTGGTCTGGCAGCTTGGGGTCAAACTaGGTGACACAGATGCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LRLGRLRHVWGHLALWSGSLGSN*VTQMPS Trigger: ACTGGGCATCTGTGTCACCCAGTTTGACCCCAAGCT...GCCAGACCACAGTGCCAGATGCCCCCAGACATGCCTCAACCTCCCCAGTCTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR CCA 90 bp | GCTATCCTGAGTGGGTTCAGGGATGGAGTGGCAGGCCCTCCTGGCACTGTTCCTTATGGAACTTGGCCTTaGTCTGCAGGGGTCCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: AILSGFRDGVAGPPGTVPYGTWP*SAGVLG Trigger: TCCGAGGACCCCTGCAGACCAAGGCCAAGTTCCATA...AGGAACAGTGCCAGGAGGGCCTGCCACTCCATCCCTGAACCCACTCAGGATAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| CDS-3UTR CCA 90 bp | CTCGTTGCTATCCTGAGTGGGTTCAGGGATGGAGTGGCAGGCCCTCCTGGCACTTCGGGGGCAGGTGACTaGCTTCTCAAACTCTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LVAILSGFRDGVAGPPGTSGAGD*LLKLYQ Trigger: CTGGTAGAGTTTGAGAAGCCAGTCACCTGCCCCCGA...AGTGCCAGGAGGGCCTGCCACTCCATCCCTGAACCCACTCAGGATAGCAACGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR CCA 90 bp | AGTGCCCTCCTCTGGCTTGGTGGTCTCTCCACGGCCGGCTCGGCTCCGCTTCTTGTAAACCCTCAGTGCTaGCAGGAAGCTCTCAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: SALLWLGGLSTAGSAPLLVNPQC*QEALNV Trigger: TACATTGAGAGCTTCCTGCCAGCACTGAGGGTTTAC...AAGAAGCGGAGCCGAGCCGGCCGTGGAGAGACCACCAAGCCAGAGGAGGGCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| CDS-3UTR TCA 90 bp | TTCAGGGATGGAGTGGCAGGCCCTCCTGGCACTGTTCCTCATTTTCCCCAGGTTTTGCCACTGTCGATGTaGCCCAGCACGCCCACATTC | + |
|
Preference number: 4 (lower is better) Translates to: FRDGVAGPPGTVPHFPQVLPLSM*PSTPTF Trigger: GAATGTGGGCGTGCTGGGTCACATCGACAGTGGCAA...AACCTGGGGAAAATGAGGAACAGTGCCAGGAGGGCCTGCCACTCCATCCCTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR TCA 90 bp | TTGGGGTCAAACTGGGTGACACAGATGCCCAGTCGGTCCCCCTGCATGGCAGAGGAGCTCAATGAGTTCTaGGATGCCCTGTGGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGSNWVTQMPSRSPCMAEELNEF*DALWSF Trigger: GAAGCTCCACAGGGCATCTCAGAACTCATTGAGCTC...CTCTGCCATGCAGGGGGACCGACTGGGCATCTGTGTCACCCAGTTTGACCCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205014.2 |
||
| CDS-3UTR TCA 90 bp | CGGCTCCGCTTCTTGAGTGTAGGTGTCAGGATCTTCTTGGACTCAGGGCTGAGGTGGGGTCAAACTGGGTaGCACAGATGCCCAGTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: RLRFLSVGVRIFLDSGLRWGQTG*HRCPVG Trigger: ACCGACTGGGCATCTGTGTCACCCAGTTTGACCCCA...CCTCAGCCCTGAGTCCAAGAAGATCCTGACACCTACACTCAAGAAGCGGAGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| CDS-3UTR TCA 90 bp | AGGGTGCCAGCTAGTTGGGGCAAGGCTGAGTGGCTGCACACTCTTATCGGGGGATCTCATGGCCAACGGTaGTATGGAACTTGGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RVPASWGKAEWLHTLIGGSHGQR*YGTWPW Trigger: CCAAGGCCAAGTTCCATATCACCGTTGGCCATGAGA...TCCCCCGATAAGAGTGTGCAGCCACTCAGCCTTGCCCCAACTAGCTGGCACCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR GCA 90 bp | CGGCTCCGCTTCTTGAGTGTAGGTGTCAGGATCTTCTTGGACTCAGGGCTGAGGGCGCCAGCGCTGTTTTaGCACTGTCGATGTGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: RLRFLSVGVRIFLDSGLRAPALF*HCRCDP Trigger: TGGGTCACATCGACAGTGGCAAAACAGCGCTGGCGC...CCTCAGCCCTGAGTCCAAGAAGATCCTGACACCTACACTCAAGAAGCGGAGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| CDS-3UTR GCA 90 bp | CCCTGGCCAGAGGACCCCAGGAAACTCAGCTGTTCAGAAAACCTCCATTCTTCATCGCGGCTCTGCGGCTaGTTGTCGAAGGCAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PWPEDPRKLSCSENLHSSSRLCG*LSKAAV Trigger: CACTGCTGCCTTCGACAAGCAGCCGCAGAGCCGCGA...TGAAGAATGGAGGTTTTCTGAACAGCTGAGTTTCCTGGGGTCCTCTGGCCAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
||
| CDS-3UTR CCA 90 bp | CTCGTTGCTATCCTGAGTGGGTTCAGGGATGGAGTGGCAGGCCCTCCTGGCACTTTCTGGCAGGCGATCTaGCCAATCACAAGGCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: LVAILSGFRDGVAGPPGTFWQAI*PITRHS Trigger: AGAGTGCCTTGTGATTGGCCAGATCGCCTGCCAGAA...AGTGCCAGGAGGGCCTGCCACTCCATCCCTGAACCCACTCAGGATAGCAACGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR CCA 90 bp | CCACGGCCGGCTCGGCTCCGCTTCTTGAGTGTAGGTGTCAGGATCTTCTTGGACAGCTTGGGGTCAAACTaGGTGACACAGATGCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PRPARLRFLSVGVRIFLDSLGSN*VTQMPS Trigger: ACTGGGCATCTGTGTCACCCAGTTTGACCCCAAGCT...GTCCAAGAAGATCCTGACACCTACACTCAAGAAGCGGAGCCGAGCCGGCCGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| CDS-3UTR CCA 90 bp | AGACTGGGGAGGTTGAGGCATGTCTGGGGGCATCTGGCACTGTGGTCTGGCTTGTGGCCAACGGTGATATaGAACTTGGCCTTGGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RLGRLRHVWGHLALWSGLWPTVI*NLALVC Trigger: GCAGACCAAGGCCAAGTTCCATATCACCGTTGGCCA...CAAGCCAGACCACAGTGCCAGATGCCCCCAGACATGCCTCAACCTCCCCAGTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR CCA 90 bp | GGGGAGGTTGAGGCATGTCTGGGGGCATCTGGCACTGTGGTCTGGCTTGCAGCTCACAGGTACTGCTCTTaGAAGAGGTACTCTCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GEVEACLGASGTVVWLAAHRYCS*KRYSRE Trigger: TTCCCGAGAGTACCTCTTCCAAGAGCAGTACCTGTG...AGCTGCAAGCCAGACCACAGTGCCAGATGCCCCCAGACATGCCTCAACCTCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR CCA 90 bp | GTGCTGGGGCTGAAGATGAGCATGGAGAGGGTCCAGGTACTCCACCCCTGGTCTCGTCATCACCTTCTGTaGCTGTGGGCATGGAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: VLGLKMSMERVQVLHPWSRHHLL*LWAWNP Trigger: AGGATTCCATGCCCACAGCCACAGAAGGTGATGACG...AGACCAGGGGTGGAGTACCTGGACCCTCTCCATGCTCATCTTCAGCCCCAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
||
| CDS-3UTR TCA 90 bp | TCTAGTAGGCCTCGTTGCTATCCTGAGTGGGTTCAGGGATGGAGTGGCAGGCCCGAGCTCAATGAGTTCTaGGATGCCCTGTGGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSRPRCYPEWVQGWSGRPELNEF*DALWSF Trigger: GAAGCTCCACAGGGCATCTCAGAACTCATTGAGCTC...GGGCCTGCCACTCCATCCCTGAACCCACTCAGGATAGCAACGAGGCCTACTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR TCA 90 bp | GGCTTGCAGCTGGGCAGGATGGTTCATTCAGGGAGTCTGTACCATGCGCTTCTGGTCATCACGGTGCCTTaGCCCTTGATGGAGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GLQLGRMVHSGSLYHALLVITVP*PLMEKQ Trigger: CTGCTTCTCCATCAAGGGTCAAGGCACCGTGATGAC...CAGAAGCGCATGGTACAGACTCCCTGAATGAACCATCCTGCCCAGCTGCAAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| CDS-3UTR TCA 90 bp | GGGGGAAGACCCAGGTTGCTGGCTCTGCTAAGGCCATTTTCTAGTAGGCCTCGTCTTTCTTCACCACCTTaGGGGCAGGGATCTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: GGRPRLLALLRPFSSRPRLSSPP*GQGSPH Trigger: GTGTGGAGATCCCTGCCCTCAAGGTGGTGAAGAAAG...ACGAGGCCTACTAGAAAATGGCCTTAGCAGAGCCAGCAACCTGGGTCTTCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR TCA 90 bp | CAGGATCTTCTTGGACTCAGGGCTGAGGCCACCTGTGTGAACCCCACCGGAGAATCTTCTCCACAGAGATaGGGGCTGCGTGAACAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QDLLGLRAEATCVNPTGESSPQR*GLREQC Trigger: ACACTGTTCACGCAGCCCTCATCTCTGTGGAGAAGA...TTCTCCGGTGGGGTTCACACAGGTGGCCTCAGCCCTGAGTCCAAGAAGATCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| CDS-3UTR TCA 90 bp | CCCTGGCCAGAGGACCCCAGGAAACTCAGCTGTTCAGAAAACCTCCATTCTTCATGTCAGGAGCAGGGCTaGAGAACAGCGTGCGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: PWPEDPRKLSCSENLHSSCQEQG*RTACDP Trigger: TGGGTCGCACGCTGTTCTTCAGCCCTGCTCCTGACA...TGAAGAATGGAGGTTTTCTGAACAGCTGAGTTTCCTGGGGTCCTCTGGCCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
||
| CDS-3UTR TCA 90 bp | TGCCAGCTAGTTGGGGCAAGGCTGAGTGGCTGCACACTCTTATCGGGGGAAGACCAGGGATGTGGATCTTaGACTTGCCACTTTGGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: CQLVGARLSGCTLLSGEDQGCGS*TCHFGR Trigger: TCGGCCAAAGTGGCAAGTTCAAGATCCACATCCCTG...GTCTTCCCCCGATAAGAGTGTGCAGCCACTCAGCCTTGCCCCAACTAGCTGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR GCA 90 bp | ACATCTGCTCCCCTTACAGGTGTCTGGAAAAGCTCTGATTTCCTTCGTTGGTCACGGATGAGGGAGGCGTaGCCGGGGCAGTCGACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TSAPLTGVWKSSDFLRWSRMREA*PGQSTS Trigger: ACTGGTCGACTGCCCCGGGCACGCCTCCCTCATCCG...TGACCAACGAAGGAAATCAGAGCTTTTCCAGACACCTGTAAGGGGAGCAGATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
||
| CDS-3UTR GCA 90 bp | CTCAGACTGGGGAGGTTGAGGCATGTCTGGGGGCATCTGGCACTGTGGTCTGGCCATTTTGTCAATCGCTaGCTGTCTCTTCCCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LRLGRLRHVWGHLALWSGHFVNR*LSLPFC Trigger: GCAGAAGGGAAGAGACAGGCAGCGATTGACAAAATG...GCCAGACCACAGTGCCAGATGCCCCCAGACATGCCTCAACCTCCCCAGTCTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR CCA 90 bp | GGTGGTCTCTCCACGGCCGGCTCGGCTCCGCTTCTTGAGTGTAGGTGTCAGGATGTGCACCCCGGAATTTaGTGTTCTCAAGAGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GGLSTAGSAPLLECRCQDVHPGI*CSQESS Trigger: AGAAGACTCTTGAGAACACCAAATTCCGGGGTGCAC...ATCCTGACACCTACACTCAAGAAGCGGAGCCGAGCCGGCCGTGGAGAGACCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| CDS-3UTR CCA 90 bp | TGGAGGGTGCCAGCTAGTTGGGGCAAGGCTGAGTGGCTGCACACTCTTATCGGGGGTCTCTCGTTGGGATaGAAATCTGGGACTTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WRVPASWGKAEWLHTLIGGLSLG*KSGTSG Trigger: TCCTGAAGTCCCAGATTTCCATCCCAACGAGAGACC...CCCGATAAGAGTGTGCAGCCACTCAGCCTTGCCCCAACTAGCTGGCACCCTCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR CCA 90 bp | GGGTGCCAGCTAGTTGGGGCAAGGCTGAGTGGCTGCACACTCTTATCGGGGGAAGAGGTGACGGGTGTATaGAACATCTGCATGGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: GCQLVGARLSGCTLLSGEEVTGV*NICMDF Trigger: GAAGTCCATGCAGATGTTCCATACACCCGTCACCTC...TTCCCCCGATAAGAGTGTGCAGCCACTCAGCCTTGCCCCAACTAGCTGGCACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR CCA 90 bp | TGGCACTGTGGTCTGGCTTGCAGCTGGGCAGGATGGTTCATTCAGGGAGTCTGTTATGGAACTTGGCCTTaGTCTGCAGGGGTCCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: WHCGLACSWAGWFIQGVCYGTWP*SAGVLG Trigger: TCCGAGGACCCCTGCAGACCAAGGCCAAGTTCCATA...ACAGACTCCCTGAATGAACCATCCTGCCCAGCTGCAAGCCAGACCACAGTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| CDS-3UTR CCA 90 bp | CTCGTTGCTATCCTGAGTGGGTTCAGGGATGGAGTGGCAGGCCCTCCTGGCACTCCCATGACTGTCTCATaGCCAACGGTGATATGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LVAILSGFRDGVAGPPGTPMTVS*PTVIWN Trigger: GTTCCATATCACCGTTGGCCATGAGACAGTCATGGG...AGTGCCAGGAGGGCCTGCCACTCCATCCCTGAACCCACTCAGGATAGCAACGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR CCA 90 bp | CAGCTAGTTGGGGCAAGGCTGAGTGGCTGCACACTCTTATCGGGGGAAGACCCACACCTTCTGTGGCTGTaGGCATGGAATCCTTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: QLVGARLSGCTLLSGEDPHLLWL*AWNPCT Trigger: TGTGCAAGGATTCCATGCCCACAGCCACAGAAGGTG...TGGGTCTTCCCCCGATAAGAGTGTGCAGCCACTCAGCCTTGCCCCAACTAGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR CCA 90 bp | GCCGGCTCGGCTCCGCTTCTTGAGTGTAGGTGTCAGGATCTTCTTGGACTCAGGCGTCATCACCTTCTGTaGCTGTGGGCATGGAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: AGSAPLLECRCQDLLGLRRHHLL*LWAWNP Trigger: AGGATTCCATGCCCACAGCCACAGAAGGTGATGACG...CCTGAGTCCAAGAAGATCCTGACACCTACACTCAAGAAGCGGAGCCGAGCCGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| CDS-3UTR CCA 90 bp | GGTGGTCTCTCCACGGCCGGCTCGGCTCCGCTTCTTGAGTGTAGGTGTCAGGATAGCCCCACAAAGAGCTaGATGTTGGTCTCCTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GGLSTAGSAPLLECRCQDSPTKS*MLVSFL Trigger: CAAAAAGGAGACCAACATCCAGCTCTTTGTGGGGCT...ATCCTGACACCTACACTCAAGAAGCGGAGCCGAGCCGGCCGTGGAGAGACCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| CDS-3UTR CCA 90 bp | GGGTGCCAGCTAGTTGGGGCAAGGCTGAGTGGCTGCACACTCTTATCGGGGGAATTGAACTTGCCACTTTaGCCGAAGGCACTGTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: GCQLVGARLSGCTLLSGELNLPL*PKALSM Trigger: CATCGACAGTGCCTTCGGCCAAAGTGGCAAGTTCAA...TTCCCCCGATAAGAGTGTGCAGCCACTCAGCCTTGCCCCAACTAGCTGGCACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR TCA 90 bp | CTTCTTGAGTGTAGGTGTCAGGATCTTCTTGGACTCAGGGCTGAGGCCACCTGTTTGCCACTGTCGATGTaGCCCAGCACGCCCACATTC | + |
|
Preference number: 4 (lower is better) Translates to: LLECRCQDLLGLRAEATCLPLSM*PSTPTF Trigger: GAATGTGGGCGTGCTGGGTCACATCGACAGTGGCAA...ACAGGTGGCCTCAGCCCTGAGTCCAAGAAGATCCTGACACCTACACTCAAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| CDS-3UTR TCA 90 bp | CTGAGTGGGTTCAGGGATGGAGTGGCAGGCCCTCCTGGCACTGTTCCTCATTTTCAGGGATGTGGATCTTaGACTTGCCACTTTGGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LSGFRDGVAGPPGTVPHFQGCGS*TCHFGR Trigger: TCGGCCAAAGTGGCAAGTTCAAGATCCACATCCCTG...AAAATGAGGAACAGTGCCAGGAGGGCCTGCCACTCCATCCCTGAACCCACTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR GCA 90 bp | TCTAGTAGGCCTCGTTGCTATCCTGAGTGGGTTCAGGGATGGAGTGGCAGGCCCTCTGCGGACTGTGTCTaGATTCCCTTGGTCACATCA | + |
|
Preference number: 4 (lower is better) Translates to: SSRPRCYPEWVQGWSGRPSADCV*IPLVTS Trigger: TGATGTGACCAAGGGAATGCAGACACAGTCCGCAGA...GGGCCTGCCACTCCATCCCTGAACCCACTCAGGATAGCAACGAGGCCTACTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR GCA 90 bp | CAGCTAGTTGGGGCAAGGCTGAGTGGCTGCACACTCTTATCGGGGGAAGACCCATGGGCATGGAATCCTTaGACAGGTACTGCTCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QLVGARLSGCTLLSGEDPWAWNP*TGTALG Trigger: TCCAAGAGCAGTACCTGTGCAAGGATTCCATGCCCA...TGGGTCTTCCCCCGATAAGAGTGTGCAGCCACTCAGCCTTGCCCCAACTAGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR GCA 90 bp | AGACTGGGGAGGTTGAGGCATGTCTGGGGGCATCTGGCACTGTGGTCTGGCTTGCTTGTAAACCCTCAGTaGTGGCAGGAAGCTCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RLGRLRHVWGHLALWSGLLVNPQ*WQEALN Trigger: ATTGAGAGCTTCCTGCCAGCACTGAGGGTTTACAAG...CAAGCCAGACCACAGTGCCAGATGCCCCCAGACATGCCTCAACCTCCCCAGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR GCA 90 bp | TGCCAGCTAGTTGGGGCAAGGCTGAGTGGCTGCACACTCTTATCGGGGGAAGACAGGGAGTCTGTACCATaGGCTTCTGGGTGTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CQLVGARLSGCTLLSGEDRESVP*ASGCQR Trigger: TCTTTGACACCCAGAAGCGCATGGTACAGACTCCCT...GTCTTCCCCCGATAAGAGTGTGCAGCCACTCAGCCTTGCCCCAACTAGCTGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
||
| CDS-3UTR CCA 90 bp | CATCTGCTCCCCTTACAGGTGTCTGGAAAAGCTCTGATTTCCTTCGTTGGTCAGTGTCGAAGGCAGCAGTaGAGGCCGTGGTGCTCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: HLLPLQVSGKALISFVGQCRRQQ*RPWCSA Trigger: CGCTGAGCACCACGGCCTCCACTGCTGCCTTCGACA...CTGACCAACGAAGGAAATCAGAGCTTTTCCAGACACCTGTAAGGGGAGCAGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
||
| CDS-3UTR CCA 90 bp | CTGAGTGGGTTCAGGGATGGAGTGGCAGGCCCTCCTGGCACTGTTCCTCATTTTTGGCCAACGGTGATATaGAACTTGGCCTTGGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSGFRDGVAGPPGTVPHFWPTVI*NLALVC Trigger: GCAGACCAAGGCCAAGTTCCATATCACCGTTGGCCA...AAAATGAGGAACAGTGCCAGGAGGGCCTGCCACTCCATCCCTGAACCCACTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR CCA 90 bp | GCCGGCTCGGCTCCGCTTCTTGAGTGTAGGTGTCAGGATCTTCTTGGACTCAGGTGTCGGCATCTAGTCTaGAGCCAATCACCAAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AGSAPLLECRCQDLLGLRCRHLV*SQSPSR Trigger: TCTGCTTGGTGATTGGCTCCAGACTAGATGCCGACA...CCTGAGTCCAAGAAGATCCTGACACCTACACTCAAGAAGCGGAGCCGAGCCGGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
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| 3UTR CAA 72 bp | GAGTGGCTGCACACTCTTATCGGGGGAAGACCCAGGTaGCTGGCTCTGCTAAGGCCATTTTCTAGTAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: EWLHTLIGGRPR*LALLRPFSSRP Trigger: AGGCCTACTAGAAAATGGCCTTAGCAGAGCCAGCAACCTGGGTCTTCCCCCGATAAGAGTGTGCAGCCACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| CDS-3UTR TCA 90 bp | TGGCCAGAGGACCCCAGGAAACTCAGCTGTTCAGAAAACCTCCATTCTTCAAGGCGAAGGCACTGTCGATaGTACCCTGTTCCCCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: WPEDPRKLSCSENLHSSRRRHCR*YPVPLW Trigger: CCACAGGGGAACAGGGTATCATCGACAGTGCCTTCG...CCTTGAAGAATGGAGGTTTTCTGAACAGCTGAGTTTCCTGGGGTCCTCTGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
||
| CDS-3UTR GCA 90 bp | CGGCTCCGCTTCTTGAGTGTAGGTGTCAGGATCTTCTTGGACTCAGGGCTGAGGTCTGCGGACTGTGTCTaGATTCCCTTGGTCACATCA | + |
|
Preference number: 4 (lower is better) Translates to: RLRFLSVGVRIFLDSGLRSADCV*IPLVTS Trigger: TGATGTGACCAAGGGAATGCAGACACAGTCCGCAGA...CCTCAGCCCTGAGTCCAAGAAGATCCTGACACCTACACTCAAGAAGCGGAGCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
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| CDS-3UTR CCA 90 bp | GTGCTGGGGCTGAAGATGAGCATGGAGAGGGTCCAGGTACTCCACCCCTGGTCTATCAAATCAATGATCTaGGCACCGCCAATGATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLGLKMSMERVQVLHPWSIKSMI*APPMMV Trigger: GACCATCATTGGCGGTGCCCAGATCATTGATTTGAT...AGACCAGGGGTGGAGTACCTGGACCCTCTCCATGCTCATCTTCAGCCCCAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
||
| CDS-3UTR CCA 90 bp | CTAGTAGGCCTCGTTGCTATCCTGAGTGGGTTCAGGGATGGAGTGGCAGGCCCTGTGCACCCCGGAATTTaGTGTTCTCAAGAGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LVGLVAILSGFRDGVAGPVHPGI*CSQESS Trigger: AGAAGACTCTTGAGAACACCAAATTCCGGGGTGCAC...AGGGCCTGCCACTCCATCCCTGAACCCACTCAGGATAGCAACGAGGCCTACTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| CDS-3UTR CCA 90 bp | CAGCTAGTTGGGGCAAGGCTGAGTGGCTGCACACTCTTATCGGGGGAAGACCCAGTTGGGATGGAAATCTaGGACTTCAGGAGCTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: QLVGARLSGCTLLSGEDPVGMEI*DFRSSM Trigger: CATTGAGCTCCTGAAGTCCCAGATTTCCATCCCAAC...TGGGTCTTCCCCCGATAAGAGTGTGCAGCCACTCAGCCTTGCCCCAACTAGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR CCA 90 bp | CAGGATCTTCTTGGACTCAGGGCTGAGGCCACCTGTGTGAACCCCACCGGAGAAGTTGGGATGGAAATCTaGGACTTCAGGAGCTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: QDLLGLRAEATCVNPTGEVGMEI*DFRSSM Trigger: CATTGAGCTCCTGAAGTCCCAGATTTCCATCCCAAC...TTCTCCGGTGGGGTTCACACAGGTGGCCTCAGCCCTGAGTCCAAGAAGATCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| CDS-3UTR CCA 90 bp | GGGGAGGTTGAGGCATGTCTGGGGGCATCTGGCACTGTGGTCTGGCTTGCAGCTTTGATGGAGAAGCAGTaGTCCACAGACATAAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GEVEACLGASGTVVWLAALMEKQ*STDIRN Trigger: ATTCCTTATGTCTGTGGACCACTGCTTCTCCATCAA...AGCTGCAAGCCAGACCACAGTGCCAGATGCCCCCAGACATGCCTCAACCTCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| CDS-3UTR CCA 90 bp | CTGAGTGGGTTCAGGGATGGAGTGGCAGGCCCTCCTGGCACTGTTCCTCATTTTCACAGGTACTGCTCTTaGAAGAGGTACTCTCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSGFRDGVAGPPGTVPHFHRYCS*KRYSRE Trigger: TTCCCGAGAGTACCTCTTCCAAGAGCAGTACCTGTG...AAAATGAGGAACAGTGCCAGGAGGGCCTGCCACTCCATCCCTGAACCCACTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR CCA 90 bp | CCCAGGGTACTAACCCCTGGCCAGAGGACCCCAGGAAACTCAGCTGTTCAGAAATGTCGGCATCTAGTCTaGAGCCAATCACCAAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PRVLTPGQRTPGNSAVQKCRHLV*SQSPSR Trigger: TCTGCTTGGTGATTGGCTCCAGACTAGATGCCGACA...TTTCTGAACAGCTGAGTTTCCTGGGGTCCTCTGGCCAGGGGTTAGTACCCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
||
| CDS-3UTR CCA 90 bp | AAGGCTGAGTGGCTGCACACTCTTATCGGGGGAAGACCCAGGTTGCTGGCTCTGGTAAACCCTCAGTGCTaGCAGGAAGCTCTCAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: KAEWLHTLIGGRPRLLALVNPQC*QEALNV Trigger: TACATTGAGAGCTTCCTGCCAGCACTGAGGGTTTAC...CAGAGCCAGCAACCTGGGTCTTCCCCCGATAAGAGTGTGCAGCCACTCAGCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR CCA 90 bp | CCCAGGGTACTAACCCCTGGCCAGAGGACCCCAGGAAACTCAGCTGTTCAGAAAAGGCCACCAGGGATGTaGATCTTGAACTTGCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: PRVLTPGQRTPGNSAVQKRPPGM*ILNLPL Trigger: AAGTGGCAAGTTCAAGATCCACATCCCTGGTGGCCT...TTTCTGAACAGCTGAGTTTCCTGGGGTCCTCTGGCCAGGGGTTAGTACCCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
||
| CDS-3UTR CCA 90 bp | CAGAGGACCCCAGGAAACTCAGCTGTTCAGAAAACCTCCATTCTTCAAGGTCCAGTGTCACAGGCTGGATaGGCTCTGGCCGTTCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QRTPGNSAVQKTSILQGPVSQAG*ALAVQC Trigger: GCACTGAACGGCCAGAGCCCATCCAGCCTGTGACAC...TGGACCTTGAAGAATGGAGGTTTTCTGAACAGCTGAGTTTCCTGGGGTCCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
||
| CDS-3UTR CCA 90 bp | GAGGTTGAGGCATGTCTGGGGGCATCTGGCACTGTGGTCTGGCTTGCAGCTGGGTCTTGTTCAGGGATGTaGATCTTGAACTTGCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: EVEACLGASGTVVWLAAGSCSGM*ILNLPL Trigger: AAGTGGCAAGTTCAAGATCCACATCCCTGAACAAGA...CCCAGCTGCAAGCCAGACCACAGTGCCAGATGCCCCCAGACATGCCTCAACCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| CDS-3UTR TCA 90 bp | GTGACGGGTGTATGGAACATCTGCATGGACTTCACTTTCTTCACCACCTTGAGGTTGCCACTGTCGATGTaGCCCAGCACGCCCACATTC | + |
|
Preference number: 4 (lower is better) Translates to: VTGVWNICMDFTFFTTLRLPLSM*PSTPTF Trigger: GAATGTGGGCGTGCTGGGTCACATCGACAGTGGCAA...CCTCAAGGTGGTGAAGAAAGTGAAGTCCATGCAGATGTTCCATACACCCGTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205014.2 |
||
| CDS-3UTR CCA 90 bp | CCACGGCCGGCTCGGCTCCGCTTCTTGAGTGTAGGTGTCAGGATCTTCTTGGACTTGATGGAGAAGCAGTaGTCCACAGACATAAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PRPARLRFLSVGVRIFLDLMEKQ*STDIRN Trigger: ATTCCTTATGTCTGTGGACCACTGCTTCTCCATCAA...GTCCAAGAAGATCCTGACACCTACACTCAAGAAGCGGAGCCGAGCCGGCCGTGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| CDS-3UTR CCA 90 bp | CTGGCCAGAGGACCCCAGGAAACTCAGCTGTTCAGAAAACCTCCATTCTTCAAGTCGGGGGCAGGTGACTaGCTTCTCAAACTCTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LARGPQETQLFRKPPFFKSGAGD*LLKLYQ Trigger: CTGGTAGAGTTTGAGAAGCCAGTCACCTGCCCCCGA...CTTGAAGAATGGAGGTTTTCTGAACAGCTGAGTTTCCTGGGGTCCTCTGGCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
||
| CDS-3UTR CCA 90 bp | TTCAGGGATGGAGTGGCAGGCCCTCCTGGCACTGTTCCTCATTTTCCCCAGGTTATCAAATCAATGATCTaGGCACCGCCAATGATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FRDGVAGPPGTVPHFPQVIKSMI*APPMMV Trigger: GACCATCATTGGCGGTGCCCAGATCATTGATTTGAT...AACCTGGGGAAAATGAGGAACAGTGCCAGGAGGGCCTGCCACTCCATCCCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR CCA 90 bp | CTGGCCAGAGGACCCCAGGAAACTCAGCTGTTCAGAAAACCTCCATTCTTCAAGTTCTGGCAGGCGATCTaGCCAATCACAAGGCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: LARGPQETQLFRKPPFFKFWQAI*PITRHS Trigger: AGAGTGCCTTGTGATTGGCCAGATCGCCTGCCAGAA...CTTGAAGAATGGAGGTTTTCTGAACAGCTGAGTTTCCTGGGGTCCTCTGGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
||
| CDS-3UTR CCA 90 bp | TGGAGGCCAAACCGAGAAACATTGGGACATCTGCTCCCCTTACAGGTGTCTGGAAGAGGGGTCTCTCGTTaGGATGGAAATCTGGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: WRPNRETLGHLLPLQVSGRGVSR*DGNLGL Trigger: AAGTCCCAGATTTCCATCCCAACGAGAGACCCCTCT...TCCAGACACCTGTAAGGGGAGCAGATGTCCCAATGTTTCTCGGTTTGGCCTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
||
| CDS-3UTR CCA 90 bp | CTGGGCAGGATGGTTCATTCAGGGAGTCTGTACCATGCGCTTCTGGGTGTCAAAGAGGTGACGGGTGTATaGAACATCTGCATGGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGRMVHSGSLYHALLGVKEVTGV*NICMDF Trigger: GAAGTCCATGCAGATGTTCCATACACCCGTCACCTC...TTTGACACCCAGAAGCGCATGGTACAGACTCCCTGAATGAACCATCCTGCCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| CDS-3UTR TCA 90 bp | CATCTGCTCCCCTTACAGGTGTCTGGAAAAGCTCTGATTTCCTTCGTTGGTCAGTCTTCTCCACAGAGATaGGGGCTGCGTGAACAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HLLPLQVSGKALISFVGQSSPQR*GLREQC Trigger: ACACTGTTCACGCAGCCCTCATCTCTGTGGAGAAGA...CTGACCAACGAAGGAAATCAGAGCTTTTCCAGACACCTGTAAGGGGAGCAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
||
| CDS-3UTR GCA 90 bp | GAGGTTGAGGCATGTCTGGGGGCATCTGGCACTGTGGTCTGGCTTGCAGCTGGGTTCTCAAGAGTCTTCTaGATTTTCTTGGTCATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: EVEACLGASGTVVWLAAGFSRVF*IFLVIL Trigger: CAAAATGACCAAGAAAATGCAGAAGACTCTTGAGAA...CCCAGCTGCAAGCCAGACCACAGTGCCAGATGCCCCCAGACATGCCTCAACCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| CDS-3UTR CCA 90 bp | CCCTGGCCAGAGGACCCCAGGAAACTCAGCTGTTCAGAAAACCTCCATTCTTCAAGCCCCACAAAGAGCTaGATGTTGGTCTCCTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PWPEDPRKLSCSENLHSSSPTKS*MLVSFL Trigger: CAAAAAGGAGACCAACATCCAGCTCTTTGTGGGGCT...TGAAGAATGGAGGTTTTCTGAACAGCTGAGTTTCCTGGGGTCCTCTGGCCAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
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| CDS-3UTR CCA 90 bp | GGACATCTGCTCCCCTTACAGGTGTCTGGAAAAGCTCTGATTTCCTTCGTTGGTCCCATGACTGTCTCATaGCCAACGGTGATATGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GHLLPLQVSGKALISFVGPMTVS*PTVIWN Trigger: GTTCCATATCACCGTTGGCCATGAGACAGTCATGGG...ACCAACGAAGGAAATCAGAGCTTTTCCAGACACCTGTAAGGGGAGCAGATGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
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| CDS-3UTR CCA 90 bp | CATCTGCTCCCCTTACAGGTGTCTGGAAAAGCTCTGATTTCCTTCGTTGGTCAGTTGAACTTGCCACTTTaGCCGAAGGCACTGTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: HLLPLQVSGKALISFVGQLNLPL*PKALSM Trigger: CATCGACAGTGCCTTCGGCCAAAGTGGCAAGTTCAA...CTGACCAACGAAGGAAATCAGAGCTTTTCCAGACACCTGTAAGGGGAGCAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
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| CDS-3UTR GCA 90 bp | GGGGGAAGACCCAGGTTGCTGGCTCTGCTAAGGCCATTTTCTAGTAGGCCTCGTTTCTCAAGAGTCTTCTaGATTTTCTTGGTCATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GGRPRLLALLRPFSSRPRFSRVF*IFLVIL Trigger: CAAAATGACCAAGAAAATGCAGAAGACTCTTGAGAA...ACGAGGCCTACTAGAAAATGGCCTTAGCAGAGCCAGCAACCTGGGTCTTCCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| CDS-3UTR CCA 90 bp | GGGCAGGATGGTTCATTCAGGGAGTCTGTACCATGCGCTTCTGGGTGTCAAAGATATGGAACATCTGCATaGACTTCACTTTCTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: GQDGSFRESVPCASGCQRYGTSA*TSLSSP Trigger: TGGTGAAGAAAGTGAAGTCCATGCAGATGTTCCATA...TCTTTGACACCCAGAAGCGCATGGTACAGACTCCCTGAATGAACCATCCTGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
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| CDS-3UTR CCA 90 bp | TGGCCAGAGGACCCCAGGAAACTCAGCTGTTCAGAAAACCTCCATTCTTCAAGGTATGGAACATCTGCATaGACTTCACTTTCTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: WPEDPRKLSCSENLHSSRYGTSA*TSLSSP Trigger: TGGTGAAGAAAGTGAAGTCCATGCAGATGTTCCATA...CCTTGAAGAATGGAGGTTTTCTGAACAGCTGAGTTTCCTGGGGTCCTCTGGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
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| CDS GCA 90 bp | GTCCGGATGAGGGAGGCGTGCCCGGGGCAGTCGACCAGTGTGACCTaGAGCAGCGTGTCGCTAGAACCGGGTTCTGCCCCCGGCAGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: VRMREACPGQSTSVT*SSVSLEPGSAPGSG Trigger: GCCGCTGCCGGGGGCAGAACCCGGTTCTAGCGACACGCTGCTGCAGGTCACACTGGTCGACTGCCCCGGGCACGCCTCCCTCATCCGGAC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000165242.4 ENSMUST00000204459.3 ENSMUST00000205014.2 ENSMUST00000205179.3 |
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| CDS GCA 90 bp | GAGAAGCCCAGGTCGAGCGTTATGCCGCGCTCGCGGCTCTGCGGCTaGTTGTCGAAGGCAGCAGTGGAGGCCGTGGTGCTCAGCGCGCGC | + |
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Preference number: 5 (lower is better) Translates to: EKPRSSVMPRSRLCG*LSKAAVEAVVLSAR Trigger: GCGCGCGCTGAGCACCACGGCCTCCACTGCTGCCTTCGACAAGCAGCCGCAGAGCCGCGAGCGCGGCATAACGCTCGACCTGGGCTTCTC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165242.4 ENSMUST00000204459.3 ENSMUST00000205014.2 ENSMUST00000205179.3 |
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| CDS CCA 90 bp | TTATGCCGCGCTCGCGGCTCTGCGGCTGCTTGTCGAAGGCAGCAGTaGAGGCCGTGGTGCTCAGCGCGCGCGCCAGCGCTGTTTTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LCRARGSAAACRRQQ*RPWCSARAPALFCH Trigger: GTGGCAAAACAGCGCTGGCGCGCGCGCTGAGCACCACGGCCTCCACTGCTGCCTTCGACAAGCAGCCGCAGAGCCGCGAGCGCGGCATAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000165242.4 ENSMUST00000204459.3 ENSMUST00000205014.2 ENSMUST00000205179.3 |
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| CDS GCA 90 bp | CGCGGCTCTGCGGCTGCTTGTCGAAGGCAGCAGTGGAGGCCGTGGTaGTCAGCGCGCGCGCCAGCGCTGTTTTGCCACTGTCGATGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: RGSAAACRRQQWRPW*SARAPALFCHCRCD Trigger: GTCACATCGACAGTGGCAAAACAGCGCTGGCGCGCGCGCTGAGCACCACGGCCTCCACTGCTGCCTTCGACAAGCAGCCGCAGAGCCGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000165242.4 ENSMUST00000204459.3 ENSMUST00000205014.2 ENSMUST00000205179.3 |
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| CDS CCA 90 bp | GCTCGCGGCTCTGCGGCTGCTTGTCGAAGGCAGCAGTGGAGGCCGTaGTGCTCAGCGCGCGCGCCAGCGCTGTTTTGCCACTGTCGATGT | + |
|
Preference number: 5 (lower is better) Translates to: ARGSAAACRRQQWRP*CSARAPALFCHCRC Trigger: ACATCGACAGTGGCAAAACAGCGCTGGCGCGCGCGCTGAGCACCACGGCCTCCACTGCTGCCTTCGACAAGCAGCCGCAGAGCCGCGAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000165242.4 ENSMUST00000204459.3 ENSMUST00000205014.2 ENSMUST00000205179.3 |
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| CDS GCA 90 bp | CCGGCAGCGGCACGACAAAACAGGAGAAGCCCAGGTCGAGCGTTATaGCGCGCTCGCGGCTCTGCGGCTGCTTGTCGAAGGCAGCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PAAARQNRRSPGRAL*RARGSAAACRRQQW Trigger: CCACTGCTGCCTTCGACAAGCAGCCGCAGAGCCGCGAGCGCGGCATAACGCTCGACCTGGGCTTCTCCTGTTTTGTCGTGCCGCTGCCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000165242.4 ENSMUST00000204459.3 ENSMUST00000205014.2 ENSMUST00000205179.3 |
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| CDS GCA 90 bp | CGGTGCACCCCGGAATCGCCAATGATGGTCCGGATGAGGGAGGCGTaGCCGGGGCAGTCGACCAGTGTGACCTGCAGCAGCGTGTCGCTA | + |
|
Preference number: 5 (lower is better) Translates to: RCTPESPMMVRMREA*PGQSTSVTCSSVSL Trigger: TAGCGACACGCTGCTGCAGGTCACACTGGTCGACTGCCCCGGGCACGCCTCCCTCATCCGGACCATCATTGGCGATTCCGGGGTGCACCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205014.2 |
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| CDS GCA 90 bp | AAACAGGAGAAGCCCAGGTCGAGCGTTATGCCGCGCTCGCGGCTCTaGGGCTGCTTGTCGAAGGCAGCAGTGGAGGCCGTGGTGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KQEKPRSSVMPRSRL*GCLSKAAVEAVVLS Trigger: GCTGAGCACCACGGCCTCCACTGCTGCCTTCGACAAGCAGCCGCAGAGCCGCGAGCGCGGCATAACGCTCGACCTGGGCTTCTCCTGTTT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165242.4 ENSMUST00000204459.3 ENSMUST00000205014.2 ENSMUST00000205179.3 |
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| CDS GCA 90 bp | CAGCAGTGGAGGCCGTGGTGCTCAGCGCGCGCGCCAGCGCTGTTTTaGCACTGTCGATGTGACCCAGCACGCCCACATTCACATTTACCC | + |
|
Preference number: 5 (lower is better) Translates to: QQWRPWCSARAPALF*HCRCDPARPHSHLP Trigger: GGGTAAATGTGAATGTGGGCGTGCTGGGTCACATCGACAGTGGCAAAACAGCGCTGGCGCGCGCGCTGAGCACCACGGCCTCCACTGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000165242.4 ENSMUST00000204459.3 ENSMUST00000205014.2 ENSMUST00000205179.3 |
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| CDS GCA 90 bp | TCAATGATCTGGGCACCGCCAATGATGGTCCGGATGAGGGAGGCGTaGCCGGGGCAGTCGACCAGTGTGACCTGCAGCAGCGTGTCGCTA | + |
|
Preference number: 5 (lower is better) Translates to: SMIWAPPMMVRMREA*PGQSTSVTCSSVSL Trigger: TAGCGACACGCTGCTGCAGGTCACACTGGTCGACTGCCCCGGGCACGCCTCCCTCATCCGGACCATCATTGGCGGTGCCCAGATCATTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165242.4 ENSMUST00000204459.3 ENSMUST00000205179.3 |
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| CDS-3UTR CAA 90 bp | AGACTGGGGAGGTTGAGGCATGTCTGGGGGCATCTGGCACTGTGGTCTGGCTTGCGGCTCTGCGGCTGCTaGTCGAAGGCAGCAGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RLGRLRHVWGHLALWSGLRLCGC*SKAAVE Trigger: CTCCACTGCTGCCTTCGACAAGCAGCCGCAGAGCCG...CAAGCCAGACCACAGTGCCAGATGCCCCCAGACATGCCTCAACCTCCCCAGTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| CDS-3UTR CAA 90 bp | GGGTGCCAGCTAGTTGGGGCAAGGCTGAGTGGCTGCACACTCTTATCGGGGGAACGGCTCTGCGGCTGCTaGTCGAAGGCAGCAGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GCQLVGARLSGCTLLSGERLCGC*SKAAVE Trigger: CTCCACTGCTGCCTTCGACAAGCAGCCGCAGAGCCG...TTCCCCCGATAAGAGTGTGCAGCCACTCAGCCTTGCCCCAACTAGCTGGCACCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| CDS-3UTR CAA 90 bp | GATGGGCTCTGGCCGTTCAGTGCCCTCCTCTGGCTTGGTGGTCTCTCCACGGCCTCTGGTCCCCCAGGTTaGGCTGCCACGGGAATAATC | + |
|
Preference number: 5 (lower is better) Translates to: DGLWPFSALLWLGGLSTASGPPG*AATGII Trigger: GATTATTCCCGTGGCAGCCAAACCTGGGGGACCAGA...GGCCGTGGAGAGACCACCAAGCCAGAGGAGGGCACTGAACGGCCAGAGCCCATC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
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| CDS CCA 90 bp | TCGGGTGCACATACCAGCCCACGCTCCAACAGCTTGGGGTCAAACTaGGTGACACAGATGCCCAGTCGGTCCCCCTGCATGGCAGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SGAHTSPRSNSLGSN*VTQMPSRSPCMAEV Trigger: CACCTCTGCCATGCAGGGGGACCGACTGGGCATCTGTGTCACCCAGTTTGACCCCAAGCTGTTGGAGCGTGGGCTGGTATGTGCACCCGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000165242.4 ENSMUST00000203886.2 ENSMUST00000205179.3 |
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| CDS CCA 90 bp | CTGGGGCGTGGCCGGCTTTGGGGTCCGCCTCGTCATCACCTTCTGTaGCTGTGGGCATGGAATCCTTGCACAGGTACTGCTCTTGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LGRGRLWGPPRHHLL*LWAWNPCTGTALGR Trigger: TCTTCCAAGAGCAGTACCTGTGCAAGGATTCCATGCCCACAGCCACAGAAGGTGATGACGAGGCGGACCCCAAAGCCGGCCACGCCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| CDS-3UTR CAA 90 bp | GGTGGTCTCTCCACGGCCGGCTCGGCTCCGCTTCTTGAGTGTAGGTGTCAGGATCCACGCTCCAACAGCTaGGGGTCAAACTGGGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: GGLSTAGSAPLLECRCQDPRSNS*GSNWVT Trigger: TGTCACCCAGTTTGACCCCAAGCTGTTGGAGCGTGG...ATCCTGACACCTACACTCAAGAAGCGGAGCCGAGCCGGCCGTGGAGAGACCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
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| CDS-3UTR CAA 90 bp | CCTCGTTGCTATCCTGAGTGGGTTCAGGGATGGAGTGGCAGGCCCTCCTGGCACATATGGAACTTGGCCTaGGTCTGCAGGGGTCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: PRCYPEWVQGWSGRPSWHIWNLA*VCRGPR Trigger: CCGAGGACCCCTGCAGACCAAGGCCAAGTTCCATAT...GTGCCAGGAGGGCCTGCCACTCCATCCCTGAACCCACTCAGGATAGCAACGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| CDS-3UTR CAA 90 bp | CCTCAGACTGGGGAGGTTGAGGCATGTCTGGGGGCATCTGGCACTGTGGTCTGGGCACAGGTACTGCTCTaGGAAGAGGTACTCTCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: PQTGEVEACLGASGTVVWAQVLL*EEVLSG Trigger: TCCCGAGAGTACCTCTTCCAAGAGCAGTACCTGTGC...CCAGACCACAGTGCCAGATGCCCCCAGACATGCCTCAACCTCCCCAGTCTGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| CDS-3UTR CAA 90 bp | GTGCTGGGGCTGAAGATGAGCATGGAGAGGGTCCAGGTACTCCACCCCTGGTCTGGTGTCAGGATCTTCTaGGACTCAGGGCTGAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VLGLKMSMERVQVLHPWSGVRIF*DSGLRP Trigger: TGGCCTCAGCCCTGAGTCCAAGAAGATCCTGACACC...AGACCAGGGGTGGAGTACCTGGACCCTCTCCATGCTCATCTTCAGCCCCAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
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| CDS GCA 90 bp | CTCCACAGAGATGAGGGCTGCGTGAACAGTGTGCAGAGACTCGGGTaGACATACCAGCCCACGCTCCAACAGCTTGGGGTCAAACTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LHRDEGCVNSVQRLG*TYQPTLQQLGVKLG Trigger: ACCCAGTTTGACCCCAAGCTGTTGGAGCGTGGGCTGGTATGTGCACCCGAGTCTCTGCACACTGTTCACGCAGCCCTCATCTCTGTGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165242.4 ENSMUST00000203886.2 ENSMUST00000205179.3 |
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| CDS GCA 90 bp | CAGGGGTCCTCGGAAGTAAGGGATCTTCTCCACAGAGATGAGGGCTaGGTGAACAGTGTGCAGAGACTCGGGTGCACATACCAGCCCACG | + |
|
Preference number: 5 (lower is better) Translates to: QGSSEVRDLLHRDEG*VNSVQRLGCTYQPT Trigger: CGTGGGCTGGTATGTGCACCCGAGTCTCTGCACACTGTTCACGCAGCCCTCATCTCTGTGGAGAAGATCCCTTACTTCCGAGGACCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165242.4 ENSMUST00000203886.2 ENSMUST00000205179.3 |
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| CDS CCA 90 bp | CGGCTTTGGGGTCCGCCTCGTCATCACCTTCTGTGGCTGTGGGCATaGAATCCTTGCACAGGTACTGCTCTTGGAAGAGGTACTCTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: RLWGPPRHHLLWLWA*NPCTGTALGRGTLG Trigger: CCCGAGAGTACCTCTTCCAAGAGCAGTACCTGTGCAAGGATTCCATGCCCACAGCCACAGAAGGTGATGACGAGGCGGACCCCAAAGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| CDS CCA 90 bp | CGTGGCCGGCTTTGGGGTCCGCCTCGTCATCACCTTCTGTGGCTGTaGGCATGGAATCCTTGCACAGGTACTGCTCTTGGAAGAGGTACT | + |
|
Preference number: 5 (lower is better) Translates to: RGRLWGPPRHHLLWL*AWNPCTGTALGRGT Trigger: AGTACCTCTTCCAAGAGCAGTACCTGTGCAAGGATTCCATGCCCACAGCCACAGAAGGTGATGACGAGGCGGACCCCAAAGCCGGCCACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| CDS-3UTR CAA 90 bp | CCCTGCATGGCAGAGGTGACGGGTGTATGGAACATCTGCATGGACTTCACTTTCCGGCTCTGCGGCTGCTaGTCGAAGGCAGCAGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PCMAEVTGVWNICMDFTFRLCGC*SKAAVE Trigger: CTCCACTGCTGCCTTCGACAAGCAGCCGCAGAGCCG...GAAAGTGAAGTCCATGCAGATGTTCCATACACCCGTCACCTCTGCCATGCAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205014.2 |
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| CDS-3UTR CAA 90 bp | CCTCGTTGCTATCCTGAGTGGGTTCAGGGATGGAGTGGCAGGCCCTCCTGGCACACTTTCTTCACCACCTaGAGGGCAGGGATCTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: PRCYPEWVQGWSGRPSWHTFFTT*RAGIST Trigger: TGTGGAGATCCCTGCCCTCAAGGTGGTGAAGAAAGT...GTGCCAGGAGGGCCTGCCACTCCATCCCTGAACCCACTCAGGATAGCAACGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| CDS-3UTR CAA 90 bp | GGGTGCCAGCTAGTTGGGGCAAGGCTGAGTGGCTGCACACTCTTATCGGGGGAACTTGTCCTCCAGCCCTaGCAGCAAGACACCATGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GCQLVGARLSGCTLLSGELVLQP*QQDTME Trigger: TTCCATGGTGTCTTGCTGCAAGGGCTGGAGGACAAG...TTCCCCCGATAAGAGTGTGCAGCCACTCAGCCTTGCCCCAACTAGCTGGCACCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| CDS-3UTR CAA 90 bp | CAGGCTGGATGGGCTCTGGCCGTTCAGTGCCCTCCTCTGGCTTGGTGGTCTCTCATGTGGATCTTGAACTaGCCACTTTGGCCGAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QAGWALAVQCPPLAWWSLMWILN*PLWPKA Trigger: TGCCTTCGGCCAAAGTGGCAAGTTCAAGATCCACAT...GAGAGACCACCAAGCCAGAGGAGGGCACTGAACGGCCAGAGCCCATCCAGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
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| CDS CCA 90 bp | TCAGGAGCAGGGCTGAAGAACAGCGTGCGACCCATGACTGTCTCATaGCCAACGGTGATATGGAACTTGGCCTTGGTCTGCAGGGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SGAGLKNSVRPMTVS*PTVIWNLALVCRGP Trigger: AGGACCCCTGCAGACCAAGGCCAAGTTCCATATCACCGTTGGCCATGAGACAGTCATGGGTCGCACGCTGTTCTTCAGCCCTGCTCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165242.4 ENSMUST00000203886.2 ENSMUST00000205179.3 |
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| CDS-3UTR CAA 90 bp | TCTAGTAGGCCTCGTTGCTATCCTGAGTGGGTTCAGGGATGGAGTGGCAGGCCCCAGAGGGGTCTCTCGTaGGGATGGAAATCTGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: SSRPRCYPEWVQGWSGRPQRGLS*GWKSGT Trigger: AGTCCCAGATTTCCATCCCAACGAGAGACCCCTCTG...GGGCCTGCCACTCCATCCCTGAACCCACTCAGGATAGCAACGAGGCCTACTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| CDS-3UTR CAA 90 bp | AGACTGGGGAGGTTGAGGCATGTCTGGGGGCATCTGGCACTGTGGTCTGGCTTGAGTCATCACGGTGCCTaGACCCTTGATGGAGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RLGRLRHVWGHLALWSGLSHHGA*TLDGEA Trigger: TGCTTCTCCATCAAGGGTCAAGGCACCGTGATGACT...CAAGCCAGACCACAGTGCCAGATGCCCCCAGACATGCCTCAACCTCCCCAGTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| CDS-3UTR CAA 90 bp | GGGTGCCAGCTAGTTGGGGCAAGGCTGAGTGGCTGCACACTCTTATCGGGGGAAACTTTCTTCACCACCTaGAGGGCAGGGATCTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: GCQLVGARLSGCTLLSGETFFTT*RAGIST Trigger: TGTGGAGATCCCTGCCCTCAAGGTGGTGAAGAAAGT...TTCCCCCGATAAGAGTGTGCAGCCACTCAGCCTTGCCCCAACTAGCTGGCACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| CDS TCA 90 bp | TGGTCTGCAGGGGTCCTCGGAAGTAAGGGATCTTCTCCACAGAGATaGGGGCTGCGTGAACAGTGTGCAGAGACTCGGGTGCACATACCA | + |
|
Preference number: 5 (lower is better) Translates to: WSAGVLGSKGSSPQR*GLREQCAETRVHIP Trigger: TGGTATGTGCACCCGAGTCTCTGCACACTGTTCACGCAGCCCTCATCTCTGTGGAGAAGATCCCTTACTTCCGAGGACCCCTGCAGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165242.4 ENSMUST00000203886.2 ENSMUST00000205179.3 |
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| CDS TCA 90 bp | CCTTGCAGCAAGACACCATGGAAGGCCAGCCGGCATGTGTTGGTGTaGATGTCGGCATCTAGTCTGGAGCCAATCACCAAGCAGAGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: PCSKTPWKASRHVLV*MSASSLEPITKQSR Trigger: CCGACTCTGCTTGGTGATTGGCTCCAGACTAGATGCCGACATTCACACCAACACATGCCGGCTGGCCTTCCATGGTGTCTTGCTGCAAGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| CDS GCA 90 bp | GGTCCGCCTCGTCATCACCTTCTGTGGCTGTGGGCATGGAATCCTTaGACAGGTACTGCTCTTGGAAGAGGTACTCTCGGGAAAGGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: GPPRHHLLWLWAWNP*TGTALGRGTLGKGR Trigger: TCGACCTTTCCCGAGAGTACCTCTTCCAAGAGCAGTACCTGTGCAAGGATTCCATGCCCACAGCCACAGAAGGTGATGACGAGGCGGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| CDS-3UTR CAA 90 bp | GATGGGCTCTGGCCGTTCAGTGCCCTCCTCTGGCTTGGTGGTCTCTCCACGGCCATTTTCTTGGTCATTTaGTCAATCGCTGCCTGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: DGLWPFSALLWLGGLSTAIFLVI*SIAACL Trigger: GAGACAGGCAGCGATTGACAAAATGACCAAGAAAAT...GGCCGTGGAGAGACCACCAAGCCAGAGGAGGGCACTGAACGGCCAGAGCCCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| CDS-3UTR CAA 90 bp | GATAGTCCCAGTCATCACGGTGCCTTGACCCTTGATGGAGAAGCAGTGGTCCACTCTGGTCCCCCAGGTTaGGCTGCCACGGGAATAATC | + |
|
Preference number: 5 (lower is better) Translates to: DSPSHHGALTLDGEAVVHSGPPG*AATGII Trigger: GATTATTCCCGTGGCAGCCAAACCTGGGGGACCAGA...GTGGACCACTGCTTCTCCATCAAGGGTCAAGGCACCGTGATGACTGGGACTATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205014.2 |
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| CDS-3UTR CAA 90 bp | CTAGTAGGCCTCGTTGCTATCCTGAGTGGGTTCAGGGATGGAGTGGCAGGCCCTAGTCATCACGGTGCCTaGACCCTTGATGGAGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LVGLVAILSGFRDGVAGPSHHGA*TLDGEA Trigger: TGCTTCTCCATCAAGGGTCAAGGCACCGTGATGACT...AGGGCCTGCCACTCCATCCCTGAACCCACTCAGGATAGCAACGAGGCCTACTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR CAA 90 bp | AGGGAGGCCTTCACGTCTGTCTGGAGGCCAAACCGAGAAACATTGGGACATCTGCCACGCTCCAACAGCTaGGGGTCAAACTGGGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: REAFTSVWRPNRETLGHLPRSNS*GSNWVT Trigger: TGTCACCCAGTTTGACCCCAAGCTGTTGGAGCGTGG...CAGATGTCCCAATGTTTCTCGGTTTGGCCTCCAGACAGACGTGAAGGCCTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
||
| CDS CCA 90 bp | CCTTCTGTGGCTGTGGGCATGGAATCCTTGCACAGGTACTGCTCTTaGAAGAGGTACTCTCGGGAAAGGTCGAAGGAATCTAGCACGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PSVAVGMESLHRYCS*KRYSRERSKESSTG Trigger: GCCCGTGCTAGATTCCTTCGACCTTTCCCGAGAGTACCTCTTCCAAGAGCAGTACCTGTGCAAGGATTCCATGCCCACAGCCACAGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR CAA 90 bp | AGGGAGGCCTTCACGTCTGTCTGGAGGCCAAACCGAGAAACATTGGGACATCTGGCACAGGTACTGCTCTaGGAAGAGGTACTCTCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: REAFTSVWRPNRETLGHLAQVLL*EEVLSG Trigger: TCCCGAGAGTACCTCTTCCAAGAGCAGTACCTGTGC...CAGATGTCCCAATGTTTCTCGGTTTGGCCTCCAGACAGACGTGAAGGCCTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
||
| CDS-3UTR CAA 90 bp | CGGCTCCGCTTCTTGAGTGTAGGTGTCAGGATCTTCTTGGACTCAGGGCTGAGGCTTGAACTTGCCACTTaGGCCGAAGGCACTGTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: RLRFLSVGVRIFLDSGLRLELAT*AEGTVD Trigger: ATCGACAGTGCCTTCGGCCAAAGTGGCAAGTTCAAG...CCTCAGCCCTGAGTCCAAGAAGATCCTGACACCTACACTCAAGAAGCGGAGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| CDS GCA 90 bp | CACAACCAGCTTCTGGCAGGCGATCTGGCCAATCACAAGGCACTCTaGGGACTGTGTCTGCATTCCCTTGGTCACATCAATCACGAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: HNQLLAGDLANHKAL*GLCLHSLGHINHEH Trigger: ATGCTCGTGATTGATGTGACCAAGGGAATGCAGACACAGTCCGCAGAGTGCCTTGTGATTGGCCAGATCGCCTGCCAGAAGCTGGTTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000165242.4 ENSMUST00000203213.3 ENSMUST00000203886.2 ENSMUST00000204459.3 ENSMUST00000205179.3 |
||
| CDS GCA 90 bp | CCGCTCCACAAGGCCATGCTTGTGCTTCAGCTTGTAAACCCTCAGTaGTGGCAGGAAGCTCTCAATGTAGTTCTTGTCCTCCAGCCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PLHKAMLVLQLVNPQ*WQEALNVVLVLQPL Trigger: CAAGGGCTGGAGGACAAGAACTACATTGAGAGCTTCCTGCCAGCACTGAGGGTTTACAAGCTGAAGCACAAGCATGGCCTTGTGGAGCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS-3UTR CAA 90 bp | AGACTGGGGAGGTTGAGGCATGTCTGGGGGCATCTGGCACTGTGGTCTGGCTTGATGTTGGTCTCCTTTTaGAACAGGGAACGTCCAATC | + |
|
Preference number: 5 (lower is better) Translates to: RLGRLRHVWGHLALWSGLMLVSF*NRERPI Trigger: GATTGGACGTTCCCTGTTCAAAAAGGAGACCAACAT...CAAGCCAGACCACAGTGCCAGATGCCCCCAGACATGCCTCAACCTCCCCAGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS CCA 90 bp | CCTTCTGCTAACAGGTCTATTTTGTTCAGCACCACAACCAGCTTCTaGCAGGCGATCTGGCCAATCACAAGGCACTCTGCGGACTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: PSANRSILFSTTTSF*QAIWPITRHSADCV Trigger: GACACAGTCCGCAGAGTGCCTTGTGATTGGCCAGATCGCCTGCCAGAAGCTGGTTGTGGTGCTGAACAAAATAGACCTGTTAGCAGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000165242.4 ENSMUST00000203213.3 ENSMUST00000203886.2 ENSMUST00000204459.3 ENSMUST00000205179.3 |
||
| CDS CCA 90 bp | GCCTTGACCCTTGATGGAGAAGCAGTGGTCCACAGACATAAGGAATaGTCCAGAGGGGTCTCTCGTTGGGATGGAAATCTGGGACTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: ALTLDGEAVVHRHKE*SRGVSRWDGNLGLQ Trigger: CTGAAGTCCCAGATTTCCATCCCAACGAGAGACCCCTCTGGACCATTCCTTATGTCTGTGGACCACTGCTTCTCCATCAAGGGTCAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000165242.4 ENSMUST00000203213.3 ENSMUST00000203886.2 ENSMUST00000204459.3 ENSMUST00000205179.3 |
||
| CDS CCA 90 bp | CTCCACAAGGCCATGCTTGTGCTTCAGCTTGTAAACCCTCAGTGCTaGCAGGAAGCTCTCAATGTAGTTCTTGTCCTCCAGCCCTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LHKAMLVLQLVNPQC*QEALNVVLVLQPLQ Trigger: CTGCAAGGGCTGGAGGACAAGAACTACATTGAGAGCTTCCTGCCAGCACTGAGGGTTTACAAGCTGAAGCACAAGCATGGCCTTGTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS CCA 90 bp | TGGATCCCATCTTGTTCAGGGATGTGGATCTTGAACTTGCCACTTTaGCCGAAGGCACTGTCGATGATACCCTGTTCCCCTGTGGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: WIPSCSGMWILNLPL*PKALSMIPCSPVDS Trigger: GCTGTCCACAGGGGAACAGGGTATCATCGACAGTGCCTTCGGCCAAAGTGGCAAGTTCAAGATCCACATCCCTGAACAAGATGGGATCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| CDS-3UTR CAA 90 bp | CATCTGCTCCCCTTACAGGTGTCTGGAAAAGCTCTGATTTCCTTCGTTGGTCAGTCTGGTCCCCCAGGTTaGGCTGCCACGGGAATAATC | + |
|
Preference number: 5 (lower is better) Translates to: HLLPLQVSGKALISFVGQSGPPG*AATGII Trigger: GATTATTCCCGTGGCAGCCAAACCTGGGGGACCAGA...CTGACCAACGAAGGAAATCAGAGCTTTTCCAGACACCTGTAAGGGGAGCAGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
||
| CDS-3UTR CAA 90 bp | GCAGGATGGTTCATTCAGGGAGTCTGTACCATGCGCTTCTGGGTGTCAAAGACACAGAGGGGTCTCTCGTaGGGATGGAAATCTGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: AGWFIQGVCTMRFWVSKTQRGLS*GWKSGT Trigger: AGTCCCAGATTTCCATCCCAACGAGAGACCCCTCTG...TGTCTTTGACACCCAGAAGCGCATGGTACAGACTCCCTGAATGAACCATCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| CDS-3UTR CAA 90 bp | TGGAGGCCAAACCGAGAAACATTGGGACATCTGCTCCCCTTACAGGTGTCTGGACTTGAACTTGCCACTTaGGCCGAAGGCACTGTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: WRPNRETLGHLLPLQVSGLELAT*AEGTVD Trigger: ATCGACAGTGCCTTCGGCCAAAGTGGCAAGTTCAAG...TCCAGACACCTGTAAGGGGAGCAGATGTCCCAATGTTTCTCGGTTTGGCCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
||
| CDS-3UTR CAA 90 bp | GTTCTATCCTCTTGCCCCTATCTCAGTCCCCATGCTAAGCTTGAGGGTGCTGGGATGTGGATCTTGAACTaGCCACTTTGGCCGAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VLSSCPYLSPHAKLEGAGMWILN*PLWPKA Trigger: TGCCTTCGGCCAAAGTGGCAAGTTCAAGATCCACAT...CCCAGCACCCTCAAGCTTAGCATGGGGACTGAGATAGGGGCAAGAGGATAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
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| CDS-3UTR CAA 90 bp | CATCTGCTCCCCTTACAGGTGTCTGGAAAAGCTCTGATTTCCTTCGTTGGTCAGGCTCGGCTCCGCTTCTaGAGTGTAGGTGTCAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: HLLPLQVSGKALISFVGQARLRF*SVGVRI Trigger: GATCCTGACACCTACACTCAAGAAGCGGAGCCGAGC...CTGACCAACGAAGGAAATCAGAGCTTTTCCAGACACCTGTAAGGGGAGCAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
||
| CDS-3UTR CAA 90 bp | ATTTCCTTCGTTGGTCAGTTCTATCCTCTTGCCCCTATCTCAGTCCCCATGCTAATATGGAACTTGGCCTaGGTCTGCAGGGGTCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: ISFVGQFYPLAPISVPMLIWNLA*VCRGPR Trigger: CCGAGGACCCCTGCAGACCAAGGCCAAGTTCCATAT...TAGCATGGGGACTGAGATAGGGGCAAGAGGATAGAACTGACCAACGAAGGAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
||
| CDS-3UTR CAA 90 bp | TTCCTTCGTTGGTCAGTTCTATCCTCTTGCCCCTATCTCAGTCCCCATGCTAAGCTTGTCCTCCAGCCCTaGCAGCAAGACACCATGGAA | + |
|
Preference number: 5 (lower is better) Translates to: FLRWSVLSSCPYLSPHAKLVLQP*QQDTME Trigger: TTCCATGGTGTCTTGCTGCAAGGGCTGGAGGACAAG...CTTAGCATGGGGACTGAGATAGGGGCAAGAGGATAGAACTGACCAACGAAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
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| CDS-3UTR CAA 90 bp | CCCAGGGTACTAACCCCTGGCCAGAGGACCCCAGGAAACTCAGCTGTTCAGAAAACAAAGAGCTGGATGTaGGTCTCCTTTTTGAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: PRVLTPGQRTPGNSAVQKTKSWM*VSFLNR Trigger: CCTGTTCAAAAAGGAGACCAACATCCAGCTCTTTGT...TTTCTGAACAGCTGAGTTTCCTGGGGTCCTCTGGCCAGGGGTTAGTACCCTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
||
| CDS GCA 90 bp | TGGCAGGCGATCTGGCCAATCACAAGGCACTCTGCGGACTGTGTCTaGATTCCCTTGGTCACATCAATCACGAGCATCATCAAATCAATG | + |
|
Preference number: 5 (lower is better) Translates to: WQAIWPITRHSADCV*IPLVTSITSIIKSM Trigger: CATTGATTTGATGATGCTCGTGATTGATGTGACCAAGGGAATGCAGACACAGTCCGCAGAGTGCCTTGTGATTGGCCAGATCGCCTGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165242.4 ENSMUST00000204459.3 ENSMUST00000205179.3 |
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| CDS-3UTR CAA 90 bp | CTGGGCAGGATGGTTCATTCAGGGAGTCTGTACCATGCGCTTCTGGGTGTCAAAATGTTGGTCTCCTTTTaGAACAGGGAACGTCCAATC | + |
|
Preference number: 5 (lower is better) Translates to: LGRMVHSGSLYHALLGVKMLVSF*NRERPI Trigger: GATTGGACGTTCCCTGTTCAAAAAGGAGACCAACAT...TTTGACACCCAGAAGCGCATGGTACAGACTCCCTGAATGAACCATCCTGCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
||
| CDS-3UTR CAA 90 bp | CTGGGCAGGATGGTTCATTCAGGGAGTCTGTACCATGCGCTTCTGGGTGTCAAAACAAAGAGCTGGATGTaGGTCTCCTTTTTGAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: LGRMVHSGSLYHALLGVKTKSWM*VSFLNR Trigger: CCTGTTCAAAAAGGAGACCAACATCCAGCTCTTTGT...TTTGACACCCAGAAGCGCATGGTACAGACTCCCTGAATGAACCATCCTGCCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
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| CDS-3UTR CAA 90 bp | ATTTCCTTCGTTGGTCAGTTCTATCCTCTTGCCCCTATCTCAGTCCCCATGCTACGCTTGAAAGACAGGTaGAGTGTCACAGGCTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: ISFVGQFYPLAPISVPMLRLKDR*SVTGWM Trigger: CATCCAGCCTGTGACACTCAACCTGTCTTTCAAGCG...TAGCATGGGGACTGAGATAGGGGCAAGAGGATAGAACTGACCAACGAAGGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
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| CDS CCA 90 bp | CTTTCTTTTGTGGCCATACGCTGGATCCCATCTTGTTCAGGGATGTaGATCTTGAACTTGCCACTTTGGCCGAAGGCACTGTCGATGATA | + |
|
Preference number: 5 (lower is better) Translates to: LSFVAIRWIPSCSGM*ILNLPLWPKALSMI Trigger: TATCATCGACAGTGCCTTCGGCCAAAGTGGCAAGTTCAAGATCCACATCCCTGAACAAGATGGGATCCAGCGTATGGCCACAAAAGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
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| CDS-3UTR CAA 90 bp | GGACATCTGCTCCCCTTACAGGTGTCTGGAAAAGCTCTGATTTCCTTCGTTGGTATTTTCTTGGTCATTTaGTCAATCGCTGCCTGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GHLLPLQVSGKALISFVGIFLVI*SIAACL Trigger: GAGACAGGCAGCGATTGACAAAATGACCAAGAAAAT...ACCAACGAAGGAAATCAGAGCTTTTCCAGACACCTGTAAGGGGAGCAGATGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165242.4 |
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| CDS CCA 72 bp | GCTCGCGGCTCTGCGGCTGCTTGTCGAAGGCAGCAGTaGAGGCCGTGGTGCTCAGCGCGCGCGCCAGCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ARGSAAACRRQQ*RPWCSARAPAL Trigger: CAGCGCTGGCGCGCGCGCTGAGCACCACGGCCTCCACTGCTGCCTTCGACAAGCAGCCGCAGAGCCGCGAGC 74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165242.4 ENSMUST00000204459.3 ENSMUST00000205014.2 ENSMUST00000205179.3 |
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| CDS CAA 90 bp | AAGCCCAGGTCGAGCGTTATGCCGCGCTCGCGGCTCTGCGGCTGCTaGTCGAAGGCAGCAGTGGAGGCCGTGGTGCTCAGCGCGCGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: KPRSSVMPRSRLCGC*SKAAVEAVVLSARA Trigger: GGCGCGCGCGCTGAGCACCACGGCCTCCACTGCTGCCTTCGACAAGCAGCCGCAGAGCCGCGAGCGCGGCATAACGCTCGACCTGGGCTT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165242.4 ENSMUST00000204459.3 ENSMUST00000205014.2 ENSMUST00000205179.3 |
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| CDS GCA 72 bp | AGGGAGGCGTGCCCGGGGCAGTCGACCAGTGTGACCTaGAGCAGCGTGTCGCTAGAACCGGGTTCTGCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: REACPGQSTSVT*SSVSLEPGSAP Trigger: GGGGGCAGAACCCGGTTCTAGCGACACGCTGCTGCAGGTCACACTGGTCGACTGCCCCGGGCACGCCTCCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000165242.4 ENSMUST00000204459.3 ENSMUST00000205014.2 ENSMUST00000205179.3 |
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| CDS GCA 72 bp | AGGTCGAGCGTTATGCCGCGCTCGCGGCTCTGCGGCTaGTTGTCGAAGGCAGCAGTGGAGGCCGTGGTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RSSVMPRSRLCG*LSKAAVEAVVL Trigger: GAGCACCACGGCCTCCACTGCTGCCTTCGACAAGCAGCCGCAGAGCCGCGAGCGCGGCATAACGCTCGACCT 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165242.4 ENSMUST00000204459.3 ENSMUST00000205014.2 ENSMUST00000205179.3 |
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| CDS GCA 72 bp | AAGCCCAGGTCGAGCGTTATGCCGCGCTCGCGGCTCTaGGGCTGCTTGTCGAAGGCAGCAGTGGAGGCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: KPRSSVMPRSRL*GCLSKAAVEAV Trigger: CACGGCCTCCACTGCTGCCTTCGACAAGCAGCCGCAGAGCCGCGAGCGCGGCATAACGCTCGACCTGGGCTT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165242.4 ENSMUST00000204459.3 ENSMUST00000205014.2 ENSMUST00000205179.3 |
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| CDS GCA 72 bp | TGGGCACCGCCAATGATGGTCCGGATGAGGGAGGCGTaGCCGGGGCAGTCGACCAGTGTGACCTGCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: WAPPMMVRMREA*PGQSTSVTCSS Trigger: GCTGCTGCAGGTCACACTGGTCGACTGCCCCGGGCACGCCTCCCTCATCCGGACCATCATTGGCGGTGCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165242.4 ENSMUST00000204459.3 ENSMUST00000205179.3 |
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| CDS CCA 72 bp | TCTGCGGCTGCTTGTCGAAGGCAGCAGTGGAGGCCGTaGTGCTCAGCGCGCGCGCCAGCGCTGTTTTGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SAAACRRQQWRP*CSARAPALFCH Trigger: GTGGCAAAACAGCGCTGGCGCGCGCGCTGAGCACCACGGCCTCCACTGCTGCCTTCGACAAGCAGCCGCAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000165242.4 ENSMUST00000204459.3 ENSMUST00000205014.2 ENSMUST00000205179.3 |
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| CDS CAA 72 bp | TCGAGCGTTATGCCGCGCTCGCGGCTCTGCGGCTGCTaGTCGAAGGCAGCAGTGGAGGCCGTGGTGCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSVMPRSRLCGC*SKAAVEAVVLS Trigger: GCTGAGCACCACGGCCTCCACTGCTGCCTTCGACAAGCAGCCGCAGAGCCGCGAGCGCGGCATAACGCTCGA 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165242.4 ENSMUST00000204459.3 ENSMUST00000205014.2 ENSMUST00000205179.3 |
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| CDS GCA 72 bp | CCGGAATCGCCAATGATGGTCCGGATGAGGGAGGCGTaGCCGGGGCAGTCGACCAGTGTGACCTGCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PESPMMVRMREA*PGQSTSVTCSS Trigger: GCTGCTGCAGGTCACACTGGTCGACTGCCCCGGGCACGCCTCCCTCATCCGGACCATCATTGGCGATTCCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205014.2 |
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| CDS GCA 72 bp | AGGCCGTGGTGCTCAGCGCGCGCGCCAGCGCTGTTTTaGCACTGTCGATGTGACCCAGCACGCCCACATTCA | + |
|
Preference number: 6 (lower is better) Translates to: RPWCSARAPALF*HCRCDPARPHS Trigger: TGAATGTGGGCGTGCTGGGTCACATCGACAGTGGCAAAACAGCGCTGGCGCGCGCGCTGAGCACCACGGCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000165242.4 ENSMUST00000204459.3 ENSMUST00000205014.2 ENSMUST00000205179.3 |
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| CDS TCA 72 bp | AGCGCGCGCGCCAGCGCTGTTTTGCCACTGTCGATGTaGCCCAGCACGCCCACATTCACATTTACCCGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: SARASAVLPLSM*PSTPTFTFTRR Trigger: CCGGCGGGTAAATGTGAATGTGGGCGTGCTGGGTCACATCGACAGTGGCAAAACAGCGCTGGCGCGCGCGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000165242.4 ENSMUST00000204459.3 ENSMUST00000205014.2 ENSMUST00000205179.3 |
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| CDS GCA 72 bp | GCACGACAAAACAGGAGAAGCCCAGGTCGAGCGTTATaGCGCGCTCGCGGCTCTGCGGCTGCTTGTCGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: ARQNRRSPGRAL*RARGSAAACRR Trigger: CCTTCGACAAGCAGCCGCAGAGCCGCGAGCGCGGCATAACGCTCGACCTGGGCTTCTCCTGTTTTGTCGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000165242.4 ENSMUST00000204459.3 ENSMUST00000205014.2 ENSMUST00000205179.3 |
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| CDS CAA 90 bp | GTGTGCAGAGACTCGGGTGCACATACCAGCCCACGCTCCAACAGCTaGGGGTCAAACTGGGTGACACAGATGCCCAGTCGGTCCCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: VCRDSGAHTSPRSNS*GSNWVTQMPSRSPC Trigger: GCAGGGGGACCGACTGGGCATCTGTGTCACCCAGTTTGACCCCAAGCTGTTGGAGCGTGGGCTGGTATGTGCACCCGAGTCTCTGCACAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000165242.4 ENSMUST00000203886.2 ENSMUST00000205179.3 |
||
| CDS GCA 72 bp | GATGAGGGCTGCGTGAACAGTGTGCAGAGACTCGGGTaGACATACCAGCCCACGCTCCAACAGCTTGGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: DEGCVNSVQRLG*TYQPTLQQLGV Trigger: GACCCCAAGCTGTTGGAGCGTGGGCTGGTATGTGCACCCGAGTCTCTGCACACTGTTCACGCAGCCCTCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165242.4 ENSMUST00000203886.2 ENSMUST00000205179.3 |
||
| CDS GCA 72 bp | TGGTCCCCCAGGTTTGGCTGCCACGGGAATAATCGGTaGACCCCGGAATCGCCAATGATGGTCCGGATGAGG | + |
|
Preference number: 6 (lower is better) Translates to: WSPRFGCHGNNR*TPESPMMVRMR Trigger: CCTCATCCGGACCATCATTGGCGATTCCGGGGTGCACCGATTATTCCCGTGGCAGCCAAACCTGGGGGACCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205014.2 |
||
| CDS CAA 72 bp | GACTCGGGTGCACATACCAGCCCACGCTCCAACAGCTaGGGGTCAAACTGGGTGACACAGATGCCCAGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: DSGAHTSPRSNS*GSNWVTQMPSR Trigger: CCGACTGGGCATCTGTGTCACCCAGTTTGACCCCAAGCTGTTGGAGCGTGGGCTGGTATGTGCACCCGAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165242.4 ENSMUST00000203886.2 ENSMUST00000205179.3 |
||
| CDS CAA 90 bp | GGGTCCGCCTCGTCATCACCTTCTGTGGCTGTGGGCATGGAATCCTaGCACAGGTACTGCTCTTGGAAGAGGTACTCTCGGGAAAGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: GSASSSPSVAVGMES*HRYCSWKRYSRERS Trigger: CGACCTTTCCCGAGAGTACCTCTTCCAAGAGCAGTACCTGTGCAAGGATTCCATGCCCACAGCCACAGAAGGTGATGACGAGGCGGACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
||
| CDS TCA 72 bp | GGGGTCCTCGGAAGTAAGGGATCTTCTCCACAGAGATaGGGGCTGCGTGAACAGTGTGCAGAGACTCGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GVLGSKGSSPQR*GLREQCAETRV Trigger: CACCCGAGTCTCTGCACACTGTTCACGCAGCCCTCATCTCTGTGGAGAAGATCCCTTACTTCCGAGGACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165242.4 ENSMUST00000203886.2 ENSMUST00000205179.3 |
||
| CDS CCA 72 bp | GTGCGACCCATGACTGTCTCATGGCCAACGGTGATATaGAACTTGGCCTTGGTCTGCAGGGGTCCTCGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VRPMTVSWPTVI*NLALVCRGPRK Trigger: CTTCCGAGGACCCCTGCAGACCAAGGCCAAGTTCCATATCACCGTTGGCCATGAGACAGTCATGGGTCGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165242.4 ENSMUST00000203886.2 ENSMUST00000205179.3 |
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| CDS CAA 90 bp | CAGTGCTGGCAGGAAGCTCTCAATGTAGTTCTTGTCCTCCAGCCCTaGCAGCAAGACACCATGGAAGGCCAGCCGGCATGTGTTGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: QCWQEALNVVLVLQP*QQDTMEGQPACVGV Trigger: CACACCAACACATGCCGGCTGGCCTTCCATGGTGTCTTGCTGCAAGGGCTGGAGGACAAGAACTACATTGAGAGCTTCCTGCCAGCACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| CDS CCA 72 bp | TTGTTCAGCACCACAACCAGCTTCTGGCAGGCGATCTaGCCAATCACAAGGCACTCTGCGGACTGTGTCTGC | + |
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Preference number: 6 (lower is better) Translates to: LFSTTTSFWQAI*PITRHSADCVC Trigger: GCAGACACAGTCCGCAGAGTGCCTTGTGATTGGCCAGATCGCCTGCCAGAAGCTGGTTGTGGTGCTGAACAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000165242.4 ENSMUST00000203213.3 ENSMUST00000203886.2 ENSMUST00000204459.3 ENSMUST00000205179.3 |
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| CDS CCA 72 bp | GGGCTGAAGAACAGCGTGCGACCCATGACTGTCTCATaGCCAACGGTGATATGGAACTTGGCCTTGGTCTGC | + |
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Preference number: 6 (lower is better) Translates to: GLKNSVRPMTVS*PTVIWNLALVC Trigger: GCAGACCAAGGCCAAGTTCCATATCACCGTTGGCCATGAGACAGTCATGGGTCGCACGCTGTTCTTCAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165242.4 ENSMUST00000203886.2 ENSMUST00000205179.3 |
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| CDS CCA 72 bp | GGTCCGCCTCGTCATCACCTTCTGTGGCTGTGGGCATaGAATCCTTGCACAGGTACTGCTCTTGGAAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: GPPRHHLLWLWA*NPCTGTALGRG Trigger: ACCTCTTCCAAGAGCAGTACCTGTGCAAGGATTCCATGCCCACAGCCACAGAAGGTGATGACGAGGCGGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| CDS CCA 72 bp | CTTTGGGGTCCGCCTCGTCATCACCTTCTGTGGCTGTaGGCATGGAATCCTTGCACAGGTACTGCTCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: LWGPPRHHLLWL*AWNPCTGTALG Trigger: TCCAAGAGCAGTACCTGTGCAAGGATTCCATGCCCACAGCCACAGAAGGTGATGACGAGGCGGACCCCAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| CDS CAA 72 bp | GAGGCCACCAGGGATGTGGATCTTGAACTTGCCACTTaGGCCGAAGGCACTGTCGATGATACCCTGTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: EATRDVDLELAT*AEGTVDDTLFP Trigger: GGGGAACAGGGTATCATCGACAGTGCCTTCGGCCAAAGTGGCAAGTTCAAGATCCACATCCCTGGTGGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000203213.3 |
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| CDS GCA 72 bp | CGTCATCACCTTCTGTGGCTGTGGGCATGGAATCCTTaGACAGGTACTGCTCTTGGAAGAGGTACTCTCGGG | + |
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Preference number: 6 (lower is better) Translates to: RHHLLWLWAWNP*TGTALGRGTLG Trigger: CCCGAGAGTACCTCTTCCAAGAGCAGTACCTGTGCAAGGATTCCATGCCCACAGCCACAGAAGGTGATGACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| CDS CCA 72 bp | AGGCCACCAGGGATGTGGATCTTGAACTTGCCACTTTaGCCGAAGGCACTGTCGATGATACCCTGTTCCCCT | + |
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Preference number: 6 (lower is better) Translates to: RPPGMWILNLPL*PKALSMIPCSP Trigger: AGGGGAACAGGGTATCATCGACAGTGCCTTCGGCCAAAGTGGCAAGTTCAAGATCCACATCCCTGGTGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000203213.3 |
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| CDS CAA 72 bp | CAGGAAGCTCTCAATGTAGTTCTTGTCCTCCAGCCCTaGCAGCAAGACACCATGGAAGGCCAGCCGGCATGT | + |
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Preference number: 6 (lower is better) Translates to: QEALNVVLVLQP*QQDTMEGQPAC Trigger: ACATGCCGGCTGGCCTTCCATGGTGTCTTGCTGCAAGGGCTGGAGGACAAGAACTACATTGAGAGCTTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| CDS GCA 72 bp | CTTCTGGCAGGCGATCTGGCCAATCACAAGGCACTCTaGGGACTGTGTCTGCATTCCCTTGGTCACATCAAT | + |
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Preference number: 6 (lower is better) Translates to: LLAGDLANHKAL*GLCLHSLGHIN Trigger: ATTGATGTGACCAAGGGAATGCAGACACAGTCCGCAGAGTGCCTTGTGATTGGCCAGATCGCCTGCCAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000165242.4 ENSMUST00000203213.3 ENSMUST00000203886.2 ENSMUST00000204459.3 ENSMUST00000205179.3 |
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| CDS GCA 72 bp | TCTGTGGCTGTGGGCATGGAATCCTTGCACAGGTACTaGTCTTGGAAGAGGTACTCTCGGGAAAGGTCGAAG | + |
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Preference number: 6 (lower is better) Translates to: SVAVGMESLHRY*SWKRYSRERSK Trigger: CTTCGACCTTTCCCGAGAGTACCTCTTCCAAGAGCAGTACCTGTGCAAGGATTCCATGCCCACAGCCACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| CDS CCA 72 bp | GTGGCCATACGCTGGATCCCATCTTGTTCAGGGATGTaGATCTTGAACTTGCCACTTTGGCCGAAGGCACTG | + |
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Preference number: 6 (lower is better) Translates to: VAIRWIPSCSGM*ILNLPLWPKAL Trigger: CAGTGCCTTCGGCCAAAGTGGCAAGTTCAAGATCCACATCCCTGAACAAGATGGGATCCAGCGTATGGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
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| CDS CAA 72 bp | GGCTGTGGGCATGGAATCCTTGCACAGGTACTGCTCTaGGAAGAGGTACTCTCGGGAAAGGTCGAAGGAATC | + |
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Preference number: 6 (lower is better) Translates to: GCGHGILAQVLL*EEVLSGKVEGI Trigger: GATTCCTTCGACCTTTCCCGAGAGTACCTCTTCCAAGAGCAGTACCTGTGCAAGGATTCCATGCCCACAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| CDS CAA 72 bp | TCGTCATCACCTTCTGTGGCTGTGGGCATGGAATCCTaGCACAGGTACTGCTCTTGGAAGAGGTACTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: SSSPSVAVGMES*HRYCSWKRYSR Trigger: CCGAGAGTACCTCTTCCAAGAGCAGTACCTGTGCAAGGATTCCATGCCCACAGCCACAGAAGGTGATGACGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| CDS CAA 90 bp | CTGGATCCCATCTTGTTCAGGGATGTGGATCTTGAACTTGCCACTTaGGCCGAAGGCACTGTCGATGATACCCTGTTCCCCTGTGGACAG | + |
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Preference number: 6 (lower is better) Translates to: LDPILFRDVDLELAT*AEGTVDDTLFPCGQ Trigger: CTGTCCACAGGGGAACAGGGTATCATCGACAGTGCCTTCGGCCAAAGTGGCAAGTTCAAGATCCACATCCCTGAACAAGATGGGATCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
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| CDS CCA 72 bp | AACAGGTCTATTTTGTTCAGCACCACAACCAGCTTCTaGCAGGCGATCTGGCCAATCACAAGGCACTCTGCG | + |
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Preference number: 6 (lower is better) Translates to: NRSILFSTTTSF*QAIWPITRHSA Trigger: CGCAGAGTGCCTTGTGATTGGCCAGATCGCCTGCCAGAAGCTGGTTGTGGTGCTGAACAAAATAGACCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000165242.4 ENSMUST00000203213.3 ENSMUST00000203886.2 ENSMUST00000204459.3 ENSMUST00000205179.3 |
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| CDS CCA 72 bp | CCTGTGGACAGCTGCACCTTAAGCCCCACAAAGAGCTaGATGTTGGTCTCCTTTTTGAACAGGGAACGTCCA | + |
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Preference number: 6 (lower is better) Translates to: PVDSCTLSPTKS*MLVSFLNRERP Trigger: TGGACGTTCCCTGTTCAAAAAGGAGACCAACATCCAGCTCTTTGTGGGGCTTAAGGTGCAGCTGTCCACAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000165242.4 ENSMUST00000203213.3 ENSMUST00000205179.3 |
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| CDS CAA 90 bp | TTGTCAATCGCTGCCTGTCTCTTCCCTTCTGCTAACAGGTCTATTTaGTTCAGCACCACAACCAGCTTCTGGCAGGCGATCTGGCCAATC | + |
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Preference number: 6 (lower is better) Translates to: LSIAACLFPSANRSI*FSTTTSFWQAIWPI Trigger: GATTGGCCAGATCGCCTGCCAGAAGCTGGTTGTGGTGCTGAACAAAATAGACCTGTTAGCAGAAGGGAAGAGACAGGCAGCGATTGACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000165242.4 ENSMUST00000203213.3 ENSMUST00000203886.2 ENSMUST00000204459.3 ENSMUST00000205179.3 |
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| CDS GCA 72 bp | ATCTGGCCAATCACAAGGCACTCTGCGGACTGTGTCTaGATTCCCTTGGTCACATCAATCACGAGCATCATC | + |
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Preference number: 6 (lower is better) Translates to: IWPITRHSADCV*IPLVTSITSII Trigger: GATGATGCTCGTGATTGATGTGACCAAGGGAATGCAGACACAGTCCGCAGAGTGCCTTGTGATTGGCCAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165242.4 ENSMUST00000204459.3 ENSMUST00000205179.3 |
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| CDS CCA 72 bp | TCTTGTTCAGGGATGTGGATCTTGAACTTGCCACTTTaGCCGAAGGCACTGTCGATGATACCCTGTTCCCCT | + |
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Preference number: 6 (lower is better) Translates to: SCSGMWILNLPL*PKALSMIPCSP Trigger: AGGGGAACAGGGTATCATCGACAGTGCCTTCGGCCAAAGTGGCAAGTTCAAGATCCACATCCCTGAACAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
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| CDS CAA 72 bp | GACAGCTGCACCTTAAGCCCCACAAAGAGCTGGATGTaGGTCTCCTTTTTGAACAGGGAACGTCCAATCACG | + |
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Preference number: 6 (lower is better) Translates to: DSCTLSPTKSWM*VSFLNRERPIT Trigger: CGTGATTGGACGTTCCCTGTTCAAAAAGGAGACCAACATCCAGCTCTTTGTGGGGCTTAAGGTGCAGCTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000165242.4 ENSMUST00000203213.3 ENSMUST00000205179.3 |
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| CDS CAA 72 bp | ATCTTGTTCAGGGATGTGGATCTTGAACTTGCCACTTaGGCCGAAGGCACTGTCGATGATACCCTGTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: ILFRDVDLELAT*AEGTVDDTLFP Trigger: GGGGAACAGGGTATCATCGACAGTGCCTTCGGCCAAAGTGGCAAGTTCAAGATCCACATCCCTGAACAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
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| CDS GCA 72 bp | AAGGCCATGCTTGTGCTTCAGCTTGTAAACCCTCAGTaGTGGCAGGAAGCTCTCAATGTAGTTCTTGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: KAMLVLQLVNPQ*WQEALNVVLVL Trigger: GAGGACAAGAACTACATTGAGAGCTTCCTGCCAGCACTGAGGGTTTACAAGCTGAAGCACAAGCATGGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165242.4 ENSMUST00000205179.3 |
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| CDS CAA 72 bp | TGGACTTTCTTTTGTGGCCATACGCTGGATCCCATCTaGTTCAGGGATGTGGATCTTGAACTTGCCACTTTG | + |
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Preference number: 6 (lower is better) Translates to: WTFFCGHTLDPI*FRDVDLELATL Trigger: CAAAGTGGCAAGTTCAAGATCCACATCCCTGAACAAGATGGGATCCAGCGTATGGCCACAAAAGAAAGTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205179.3 |
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