Pregenerated sensors for EEF2KMT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022544Ensembl transcript IDs: ENSMUST00000064635.12, ENSMUST00000139584.2
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGCACTTCTGTTACTTCCAGTGTCCCTGCCAACTTCTCAGTCCCTaGGTTTTTGTTTCTGGACTTGTCACATCCCTTGCGTTCTGGTTC | + |
|
Preference number: 1 (lower is better) Translates to: EHFCYFQCPCQLLSP*VFVSGLVTSLAFWF Trigger: GAACCAGAACGCAAGGGATGTGACAAGTCCAGAAACAAAAACCCAGGGACTGAGAAGTTGGCAGGGACACTGGAAGTAACAGAAGTGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| 3UTR GCA 90 bp | CTGAGGACAGGCACCAGCACTCAGCCTGTGCTTACTGTACACTTGTaGTGTTATTTAACATTCCTGCTCAACAGAAGCCTTTCCGCTTTC | + |
|
Preference number: 1 (lower is better) Translates to: LRTGTSTQPVLTVHL*CYLTFLLNRSLSAF Trigger: GAAAGCGGAAAGGCTTCTGTTGAGCAGGAATGTTAAATAACAGCACAAGTGTACAGTAAGCACAGGCTGAGTGCTGGTGCCTGTCCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| 3UTR-3UTR GCA 90 bp | CGAGTGAGCGGAGGGGCACCACTGGACACGAGCAAGGAGGCCGGGGCCTGGTGCCTTGCGTTCTGGTTCTaGTGTGAGCTCTGGGATAGC | + |
|
Preference number: 2 (lower is better) Translates to: RVSGGAPLDTSKEAGAWCLAFWF*CELWDS Trigger: GCTATCCCAGAGCTCACAGCAGAACCAGAACGCAAG...GCACCAGGCCCCGGCCTCCTTGCTCGTGTCCAGTGGTGCCCCTCCGCTCACTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| 3UTR-3UTR CCA 90 bp | CGAGTGAGCGGAGGGGCACCACTGGACACGAGCAAGGAGGCCGGGGCCTGGTGCTGTGTTCACTGGGTTTaGCTGAGCAAGGCTGAACTG | + |
|
Preference number: 2 (lower is better) Translates to: RVSGGAPLDTSKEAGAWCCVHWV*LSKAEL Trigger: CAGTTCAGCCTTGCTCAGCCAAACCCAGTGAACACA...GCACCAGGCCCCGGCCTCCTTGCTCGTGTCCAGTGGTGCCCCTCCGCTCACTCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| 3UTR-3UTR CCA 90 bp | CTTTATTTACAAAGGCAGGTGGGCAGGACCCAACCCGTCCCTGATAGACACACTGCCCCATCCACCCTGTaGCCACCCTTCCTGCCGGGG | + |
|
Preference number: 2 (lower is better) Translates to: LYLQRQVGRTQPVPDRHTAPSTL*PPFLPG Trigger: CCCCGGCAGGAAGGGTGGCCACAGGGTGGATGGGGC...AGTGTGTCTATCAGGGACGGGTTGGGTCCTGCCCACCTGCCTTTGTAAATAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| 3UTR-3UTR CCA 90 bp | CCCAACCCGTCCCTGATAGACACACTAAAGGCTTCCATCTTAACTGCATCTGCATCGGGGCAGCAACGCTaGGATGAGAGCTGGCAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: PNPSLIDTLKASILTASASGQQR*DESWQH Trigger: GTGCTGCCAGCTCTCATCCCAGCGTTGCTGCCCCGA...TGCAGATGCAGTTAAGATGGAAGCCTTTAGTGTGTCTATCAGGGACGGGTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| 3UTR-3UTR TCA 90 bp | TGGGCAGGACCCAACCCGTCCCTGATAGACACACTAAAGGCTTCCATCTTAACTTGTGTCCACTCGAGATaGGCTGCTGAGGACAGGCAC | + |
|
Preference number: 2 (lower is better) Translates to: WAGPNPSLIDTLKASILTCVHSR*AAEDRH Trigger: GTGCCTGTCCTCAGCAGCTCATCTCGAGTGGACACA...AGTTAAGATGGAAGCCTTTAGTGTGTCTATCAGGGACGGGTTGGGTCCTGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| 3UTR-3UTR CCA 90 bp | ACCCAACCCGTCCCTGATAGACACACTAAAGGCTTCCATCTTAACTGCATCTGCGTTCCCAGACCCTGCTaGAAAGCTAAGCCAGTTCCG | + |
|
Preference number: 2 (lower is better) Translates to: TQPVPDRHTKGFHLNCICVPRPC*KAKPVP Trigger: CGGAACTGGCTTAGCTTTCCAGCAGGGTCTGGGAAC...GCAGATGCAGTTAAGATGGAAGCCTTTAGTGTGTCTATCAGGGACGGGTTGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| 3UTR CAA 90 bp | AGTGTCCCTGCCAACTTCTCAGTCCCTGGGTTTTTGTTTCTGGACTaGTCACATCCCTTGCGTTCTGGTTCTGCTGTGAGCTCTGGGATA | + |
|
Preference number: 2 (lower is better) Translates to: SVPANFSVPGFLFLD*SHPLRSGSAVSSGI Trigger: TATCCCAGAGCTCACAGCAGAACCAGAACGCAAGGGATGTGACAAGTCCAGAAACAAAAACCCAGGGACTGAGAAGTTGGCAGGGACACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| 3UTR-3UTR CCA 90 bp | CTTTATTTACAAAGGCAGGTGGGCAGGACCCAACCCGTCCCTGATAGACACACTTTCTGCTGTGAGCTCTaGGATAGCCTGTGTTCACTG | + |
|
Preference number: 2 (lower is better) Translates to: LYLQRQVGRTQPVPDRHTFCCEL*DSLCSL Trigger: CAGTGAACACAGGCTATCCCAGAGCTCACAGCAGAA...AGTGTGTCTATCAGGGACGGGTTGGGTCCTGCCCACCTGCCTTTGTAAATAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| 3UTR CAA 90 bp | TCTGTTACTTCCAGTGTCCCTGCCAACTTCTCAGTCCCTGGGTTTTaGTTTCTGGACTTGTCACATCCCTTGCGTTCTGGTTCTGCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: SVTSSVPANFSVPGF*FLDLSHPLRSGSAV Trigger: CACAGCAGAACCAGAACGCAAGGGATGTGACAAGTCCAGAAACAAAAACCCAGGGACTGAGAAGTTGGCAGGGACACTGGAAGTAACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| 3UTR-3UTR TCA 90 bp | TCTCAGTCCCTGGGTTTTTGTTTCTGGACTTGTCACATCCCTTGCGTTCTGGTTTGGAAGTGTTTGCTCTaGGCCTGTGTCCACTCGAGA | + |
|
Preference number: 2 (lower is better) Translates to: SQSLGFCFWTCHIPCVLVWKCLL*ACVHSR Trigger: TCTCGAGTGGACACAGGCTCAGAGCAAACACTTCCA...AACCAGAACGCAAGGGATGTGACAAGTCCAGAAACAAAAACCCAGGGACTGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| 3UTR-3UTR CCA 90 bp | TGGGCAGGACCCAACCCGTCCCTGATAGACACACTAAAGGCTTCCATCTTAACTATCTGGCTACTGATCTaGCAGCTCTCTTCTGTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: WAGPNPSLIDTLKASILTIWLLI*QLSSVL Trigger: CAGAACAGAAGAGAGCTGCCAGATCAGTAGCCAGAT...AGTTAAGATGGAAGCCTTTAGTGTGTCTATCAGGGACGGGTTGGGTCCTGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| 3UTR-3UTR TCA 90 bp | CTTTATTTACAAAGGCAGGTGGGCAGGACCCAACCCGTCCCTGATAGACACACTAGCTCTCTTCTGTTCTaGGCACTTCTGTTACTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: LYLQRQVGRTQPVPDRHTSSLLF*ALLLLP Trigger: TGGAAGTAACAGAAGTGCTCAGAACAGAAGAGAGCT...AGTGTGTCTATCAGGGACGGGTTGGGTCCTGCCCACCTGCCTTTGTAAATAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| 3UTR-3UTR TCA 90 bp | CTTTATTTACAAAGGCAGGTGGGCAGGACCCAACCCGTCCCTGATAGACACACTCTTTCCGCTTTCCCATaGCAGTCATTTTTCTTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: LYLQRQVGRTQPVPDRHTLSAFP*QSFFFS Trigger: AGAAAAGAAAAATGACTGTCATGGGAAAGCGGAAAG...AGTGTGTCTATCAGGGACGGGTTGGGTCCTGCCCACCTGCCTTTGTAAATAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| 3UTR-3UTR GCA 90 bp | ACCCAACCCGTCCCTGATAGACACACTAAAGGCTTCCATCTTAACTGCATCTGCCTTACTGTACACTTGTaGTGTTATTTAACATTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: TQPVPDRHTKGFHLNCICLTVHL*CYLTFL Trigger: CAGGAATGTTAAATAACAGCACAAGTGTACAGTAAG...GCAGATGCAGTTAAGATGGAAGCCTTTAGTGTGTCTATCAGGGACGGGTTGGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| 3UTR TCA 72 bp | TTTGCTCTGAGCCTGTGTCCACTCGAGATGAGCTGCTaGGGACAGGCACCAGCACTCAGCCTGTGCTTACTG | + |
|
Preference number: 3 (lower is better) Translates to: FALSLCPLEMSC*GQAPALSLCLL Trigger: CAGTAAGCACAGGCTGAGTGCTGGTGCCTGTCCTCAGCAGCTCATCTCGAGTGGACACAGGCTCAGAGCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| 3UTR TCA 72 bp | GTGGAGGCTAGCCATTCTCTAGGGCAGGGCTGTGGGTaGGTAGATGAATCCATCAAGTGTCGAGTGAGCGGA | + |
|
Preference number: 3 (lower is better) Translates to: VEASHSLGQGCG*VDESIKCRVSG Trigger: TCCGCTCACTCGACACTTGATGGATTCATCTACTCACCCACAGCCCTGCCCTAGAGAATGGCTAGCCTCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| 3UTR CCA 72 bp | GCTGTGAGCTCTGGGATAGCCTGTGTTCACTGGGTTTaGCTGAGCAAGGCTGAACTGTCTGACAGGACAGTC | + |
|
Preference number: 3 (lower is better) Translates to: AVSSGIACVHWV*LSKAELSDRTV Trigger: GACTGTCCTGTCAGACAGTTCAGCCTTGCTCAGCCAAACCCAGTGAACACAGGCTATCCCAGAGCTCACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| 3UTR CCA 72 bp | GTCACATCCCTTGCGTTCTGGTTCTGCTGTGAGCTCTaGGATAGCCTGTGTTCACTGGGTTTGGCTGAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: VTSLAFWFCCEL*DSLCSLGLAEQ Trigger: TTGCTCAGCCAAACCCAGTGAACACAGGCTATCCCAGAGCTCACAGCAGAACCAGAACGCAAGGGATGTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| 3UTR-3UTR CAA 90 bp | CTTTATTTACAAAGGCAGGTGGGCAGGACCCAACCCGTCCCTGATAGACACACTATCTGCAGGGGTGTGTaGAGGATGGGAGGGGAAACT | + |
|
Preference number: 3 (lower is better) Translates to: LYLQRQVGRTQPVPDRHTICRGV*RMGGET Trigger: AGTTTCCCCTCCCATCCTCAACACACCCCTGCAGAT...AGTGTGTCTATCAGGGACGGGTTGGGTCCTGCCCACCTGCCTTTGTAAATAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| 3UTR GCA 72 bp | GTTTCTGGACTTGTCACATCCCTTGCGTTCTGGTTCTaGTGTGAGCTCTGGGATAGCCTGTGTTCACTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: VSGLVTSLAFWF*CELWDSLCSLG Trigger: ACCCAGTGAACACAGGCTATCCCAGAGCTCACAGCAGAACCAGAACGCAAGGGATGTGACAAGTCCAGAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| 3UTR CCA 72 bp | CAGCAGTGGGCGACAGCTAGGATCTGGCTACTGATCTaGCAGCTCTCTTCTGTTCTGAGCACTTCTGTTACT | + |
|
Preference number: 3 (lower is better) Translates to: QQWATARIWLLI*QLSSVLSTSVT Trigger: AGTAACAGAAGTGCTCAGAACAGAAGAGAGCTGCCAGATCAGTAGCCAGATCCTAGCTGTCGCCCACTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| 3UTR CCA 72 bp | TGTTACTTCCAGTGTCCCTGCCAACTTCTCAGTCCCTaGGTTTTTGTTTCTGGACTTGTCACATCCCTTGCG | + |
|
Preference number: 3 (lower is better) Translates to: CYFQCPCQLLSP*VFVSGLVTSLA Trigger: CGCAAGGGATGTGACAAGTCCAGAAACAAAAACCCAGGGACTGAGAAGTTGGCAGGGACACTGGAAGTAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| 3UTR CCA 72 bp | GTTTTTGTTTCTGGACTTGTCACATCCCTTGCGTTCTaGTTCTGCTGTGAGCTCTGGGATAGCCTGTGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: VFVSGLVTSLAF*FCCELWDSLCS Trigger: TGAACACAGGCTATCCCAGAGCTCACAGCAGAACCAGAACGCAAGGGATGTGACAAGTCCAGAAACAAAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| 3UTR-3UTR CAA 90 bp | TTCTGTTCTGAGCACTTCTGTTACTTCCAGTGTCCCTGCCAACTTCTCAGTCCCTTTTTGTTTCTGGACTaGTCACATCCCTTGCGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: FCSEHFCYFQCPCQLLSPFLFLD*SHPLRS Trigger: AGAACGCAAGGGATGTGACAAGTCCAGAAACAAAAA...GGGACTGAGAAGTTGGCAGGGACACTGGAAGTAACAGAAGTGCTCAGAACAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| CDS-3UTR TCA 90 bp | TGCCAACTTCTCAGTCCCTGGGTTTTTGTTTCTGGACTTGTCACATCCCTTGCGTGGAAGGCAGAGAGCTaGGAGGCTGTCACCTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CQLLSPWVFVSGLVTSLAWKAES*EAVTSS Trigger: GGACGAGGTGACAGCCTCTCAGCTCTCTGCCTTCCA...CGCAAGGGATGTGACAAGTCCAGAAACAAAAACCCAGGGACTGAGAAGTTGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| 3UTR CAA 72 bp | GTCCCTGGGTTTTTGTTTCTGGACTTGTCACATCCCTaGCGTTCTGGTTCTGCTGTGAGCTCTGGGATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VPGFLFLDLSHP*RSGSAVSSGIA Trigger: GGCTATCCCAGAGCTCACAGCAGAACCAGAACGCAAGGGATGTGACAAGTCCAGAAACAAAAACCCAGGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| CDS-3UTR GCA 90 bp | TGGGCAGGACCCAACCCGTCCCTGATAGACACACTAAAGGCTTCCATCTTAACTTTTTCTTCTAGGCTCTaGCAGGGAAAGGAGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WAGPNPSLIDTLKASILTFSSRL*QGKEGS Trigger: GCTGCCCTCCTTTCCCTGGCAGAGCCTAGAAGAAAA...AGTTAAGATGGAAGCCTTTAGTGTGTCTATCAGGGACGGGTTGGGTCCTGCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| CDS-3UTR GCA 90 bp | GGGTTTTTGTTTCTGGACTTGTCACATCCCTTGCGTTCTGGTTCTGCTGTGAGCACAGAAGGTCCGTGCTaGACACACACAGGGTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GFLFLDLSHPLRSGSAVSTEGPC*THTGCF Trigger: GAAGCACCCTGTGTGTGTGCAGCACGGACCTTCTGT...GCTCACAGCAGAACCAGAACGCAAGGGATGTGACAAGTCCAGAAACAAAAACCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| CDS-3UTR GCA 90 bp | CCCTGGGTTTTTGTTTCTGGACTTGTCACATCCCTTGCGTTCTGGTTCTGCTGTGCATGCCTTGCAAATTaGCAGGCCTGTAAGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PWVFVSGLVTSLAFWFCCACLAN*QACKAS Trigger: GCTGGCCTTACAGGCCTGGCAATTTGCAAGGCATGC...ACAGCAGAACCAGAACGCAAGGGATGTGACAAGTCCAGAAACAAAAACCCAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| CDS-3UTR TCA 90 bp | GGGTTTTTGTTTCTGGACTTGTCACATCCCTTGCGTTCTGGTTCTGCTGTGAGCGCATCTTCAGGACCCTaGCCAGTGACAGTGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: GFLFLDLSHPLRSGSAVSASSGP*PVTVSS Trigger: AGATGACACTGTCACTGGTCAGGGTCCTGAAGATGC...GCTCACAGCAGAACCAGAACGCAAGGGATGTGACAAGTCCAGAAACAAAAACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| CDS-3UTR GCA 90 bp | TTCTGTTCTGAGCACTTCTGTTACTTCCAGTGTCCCTGCCAACTTCTCAGTCCCTGCACACACACAGGGTaGTTCACAGTCCTCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FCSEHFCYFQCPCQLLSPCTHTG*FTVLCR Trigger: TCTGCAGAGGACTGTGAAGCACCCTGTGTGTGTGCA...GGGACTGAGAAGTTGGCAGGGACACTGGAAGTAACAGAAGTGCTCAGAACAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| 3UTR CAA 72 bp | GCCAACTTCTCAGTCCCTGGGTTTTTGTTTCTGGACTaGTCACATCCCTTGCGTTCTGGTTCTGCTGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ANFSVPGFLFLD*SHPLRSGSAVS Trigger: GCTCACAGCAGAACCAGAACGCAAGGGATGTGACAAGTCCAGAAACAAAAACCCAGGGACTGAGAAGTTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| CDS-3UTR TCA 90 bp | TCTCAGTCCCTGGGTTTTTGTTTCTGGACTTGTCACATCCCTTGCGTTCTGGTTGTACATCTGCTGCAATaGCAACATCTGCCTGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SQSLGFCFWTCHIPCVLVVHLLQ*QHLPGR Trigger: CCTTCCAGGCAGATGTTGTCATTGCAGCAGATGTAC...AACCAGAACGCAAGGGATGTGACAAGTCCAGAAACAAAAACCCAGGGACTGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| CDS-3UTR TCA 90 bp | CAGCCTGTGCTTACTGTACACTTGTGCTGTTATTTAACATTCCTGCTCAACAGACAGGACCCTGACCAGTaGCAGTGTCATCTCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QPVLTVHLCCYLTFLLNRQDPDQ*QCHLPA Trigger: TGCTGGGAGATGACACTGTCACTGGTCAGGGTCCTG...TCTGTTGAGCAGGAATGTTAAATAACAGCACAAGTGTACAGTAAGCACAGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| CDS-3UTR GCA 90 bp | TGCCAACTTCTCAGTCCCTGGGTTTTTGTTTCTGGACTTGTCACATCCCTTGCGGTGGGTACAGCCTCATaGTTTTTGATGAGCTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CQLLSPWVFVSGLVTSLAVGTAS*FLMSFE Trigger: CTCAAAGCTCATCAAAAAGCATGAGGCTGTACCCAC...CGCAAGGGATGTGACAAGTCCAGAAACAAAAACCCAGGGACTGAGAAGTTGGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| 3UTR CAA 72 bp | ACAGGCACCAGCACTCAGCCTGTGCTTACTGTACACTaGTGCTGTTATTTAACATTCCTGCTCAACAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TGTSTQPVLTVH*CCYLTFLLNRS Trigger: GCTTCTGTTGAGCAGGAATGTTAAATAACAGCACAAGTGTACAGTAAGCACAGGCTGAGTGCTGGTGCCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| CDS-3UTR TCA 90 bp | CAGCCTGTGCTTACTGTACACTTGTGCTGTTATTTAACATTCCTGCTCAACAGATCAAGCACTTGGGCATaGCAGTCGCTGAAGATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: QPVLTVHLCCYLTFLLNRSSTWA*QSLKMY Trigger: ATACATCTTCAGCGACTGTCATGCCCAAGTGCTTGA...TCTGTTGAGCAGGAATGTTAAATAACAGCACAAGTGTACAGTAAGCACAGGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| CDS-3UTR GCA 90 bp | CAGCCTGTGCTTACTGTACACTTGTGCTGTTATTTAACATTCCTGCTCAACAGAGCAGTACAGTACATCTaGTGCAATGACAACATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QPVLTVHLCCYLTFLLNRAVQYI*CNDNIC Trigger: GCAGATGTTGTCATTGCAGCAGATGTACTGTACTGC...TCTGTTGAGCAGGAATGTTAAATAACAGCACAAGTGTACAGTAAGCACAGGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| CDS-3UTR CAA 90 bp | GATGAATCCATCAAGTGTCGAGTGAGCGGAGGGGCACCACTGGACACGAGCAAGCTGGGGCAGCATGCCTaGCAAATTGCCAGGCCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: DESIKCRVSGGAPLDTSKLGQHA*QIARPV Trigger: TACAGGCCTGGCAATTTGCAAGGCATGCTGCCCCAG...CTTGCTCGTGTCCAGTGGTGCCCCTCCGCTCACTCGACACTTGATGGATTCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| CDS-3UTR CAA 90 bp | GATGAATCCATCAAGTGTCGAGTGAGCGGAGGGGCACCACTGGACACGAGCAAGTCTAAGGAGAAGCCGTaGAGGAGAACGTTTCCACGG | + |
|
Preference number: 5 (lower is better) Translates to: DESIKCRVSGGAPLDTSKSKEKP*RRTFPR Trigger: CCGTGGAAACGTTCTCCTCAACGGCTTCTCCTTAGA...CTTGCTCGTGTCCAGTGGTGCCCCTCCGCTCACTCGACACTTGATGGATTCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| CDS-3UTR CAA 90 bp | CAGCCTGTGCTTACTGTACACTTGTGCTGTTATTTAACATTCCTGCTCAACAGAGCACTGGGTGGACTCTaGGGTCATCAGAACCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QPVLTVHLCCYLTFLLNRALGGL*GHQNLC Trigger: GCAGAGGTTCTGATGACCCAAGAGTCCACCCAGTGC...TCTGTTGAGCAGGAATGTTAAATAACAGCACAAGTGTACAGTAAGCACAGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| CDS TCA 72 bp | TCTTCCTCTGGCAGTCCTCGAGCATCTTCAGGACCCTaGCCAGTGACAGTGTCATCTCCCAGCAGTACAGTA | + |
|
Preference number: 6 (lower is better) Translates to: SSSGSPRASSGP*PVTVSSPSSTV Trigger: TACTGTACTGCTGGGAGATGACACTGTCACTGGTCAGGGTCCTGAAGATGCTCGAGGACTGCCAGAGGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064635.12 ENSMUST00000139584.2 |
||
| CDS TCA 72 bp | GCGACTGGTCAGCACCAGCTTCAGGATTACGATGGCTaGATGCTCTTCGTAAGGGAACAGTTTGCCAGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: ATGQHQLQDYDG*MLFVREQFASV Trigger: CACACTGGCAAACTGTTCCCTTACGAAGAGCATTCAGCCATCGTAATCCTGAAGCTGGTGCTGACCAGTCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||
| CDS CCA 72 bp | CATGGCGACTGGTCAGCACCAGCTTCAGGATTACGATaGCTGAATGCTCTTCGTAAGGGAACAGTTTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: HGDWSAPASGLR*LNALRKGTVCQ Trigger: CTGGCAAACTGTTCCCTTACGAAGAGCATTCAGCCATCGTAATCCTGAAGCTGGTGCTGACCAGTCGCCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064635.12 |
||