Pregenerated sensors for EEF2K (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035064Ensembl transcript IDs: ENSMUST00000047875.16, ENSMUST00000106487.9, ENSMUST00000106488.3, ENSMUST00000106489.9, ENSMUST00000143279.3, ENSMUST00000143322.9, ENSMUST00000146482.3
Found 273 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCTACTGTGAAAAGCCAGCATGGGACCACGTTGGGCCCACACTGTaGGCGATGGAGCTCATGTTGAAGGTGAGCACATCCGCTCTTCGA | + |
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Preference number: 1 (lower is better) Translates to: FYCEKPAWDHVGPTL*AMELMLKVSTSALR Trigger: TCGAAGAGCGGATGTGCTCACCTTCAACATGAGCTCCATCGCCCACAGTGTGGGCCCAACGTGGTCCCATGCTGGCTTTTCACAGTAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR TCA 90 bp | AGGCTATCCCAGTCTCTTGGAGGAGAAAGAGACCACTTCTCCACATaGAGGCCACGTGGTTGGGGGAACTGCAGGCCTGAGGCTTTAAGT | + |
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Preference number: 1 (lower is better) Translates to: RLSQSLGGERDHFST*RPRGWGNCRPEALS Trigger: ACTTAAAGCCTCAGGCCTGCAGTTCCCCCAACCACGTGGCCTTCATGTGGAGAAGTGGTCTCTTTCTCCTCCAAGAGACTGGGATAGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR GCA 90 bp | AAAGGTTTCCCAGCACATGGCCTGGAGACCCTGAGATGTGAGTCCTaGCTGCAAAGGCTGGCGAGAGAAGCCCTGATACTGTCTGATCAT | + |
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Preference number: 1 (lower is better) Translates to: KGFPAHGLETLRCES*LQRLAREALILSDH Trigger: ATGATCAGACAGTATCAGGGCTTCTCTCGCCAGCCTTTGCAGGCAGGACTCACATCTCAGGGTCTCCAGGCCATGTGCTGGGAAACCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
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| 3UTR GCA 90 bp | GGCTCTCTCGGGACACAGCACACAAGTGAAGATCAGAAGACAACTTaGAGGAGTTTGTTCCCTGCTTCCACGCGTGGGTCCCAAGAACAG | + |
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Preference number: 1 (lower is better) Translates to: GSLGTQHTSEDQKTT*RSLFPASTRGSQEQ Trigger: CTGTTCTTGGGACCCACGCGTGGAAGCAGGGAACAAACTCCTGCAAGTTGTCTTCTGATCTTCACTTGTGTGCTGTGTCCCGAGAGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR CCA 90 bp | TGCTTTGAGCACTGGAAGACAGAACTGATCATCAGTGCCAGGCACTaGCGTCTCCCTGCCAGAGCTGAATCCTGTCGGCTTGTTCTTGTC | + |
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Preference number: 1 (lower is better) Translates to: CFEHWKTELIISARH*RLPARAESCRLVLV Trigger: GACAAGAACAAGCCGACAGGATTCAGCTCTGGCAGGGAGACGCCAGTGCCTGGCACTGATGATCAGTTCTGTCTTCCAGTGCTCAAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR CCA 90 bp | AGCCCAGGCTGGCTCCAAACTCACAATCCTGCTTCAGCCTCCAAGTaGCAATATTACCCAGCAGGCTCTCCAAGCTCTCTTTTCATTCGC | + |
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Preference number: 1 (lower is better) Translates to: SPGWLQTHNPASASK*QYYPAGSPSSLFIR Trigger: GCGAATGAAAAGAGAGCTTGGAGAGCCTGCTGGGTAATATTGCCACTTGGAGGCTGAAGCAGGATTGTGAGTTTGGAGCCAGCCTGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR TCA 90 bp | GTGTGTGTGTGTGTATGGGGGCTCTCTCGGGACACAGCACACAAGTaGAGATCAGAAGACAACTTGCAGGAGTTTGTTCCCTGCTTCCAC | + |
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Preference number: 1 (lower is better) Translates to: VCVCVWGLSRDTAHK*RSEDNLQEFVPCFH Trigger: GTGGAAGCAGGGAACAAACTCCTGCAAGTTGTCTTCTGATCTTCACTTGTGTGCTGTGTCCCGAGAGAGCCCCCATACACACACACACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR CCA 90 bp | CGCATATCAGCTCTGTTAATCGAGGCTGTTACCTGCTTTGAGCACTaGAAGACAGAACTGATCATCAGTGCCAGGCACTGGCGTCTCCCT | + |
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Preference number: 1 (lower is better) Translates to: RISALLIEAVTCFEH*KTELIISARHWRLP Trigger: AGGGAGACGCCAGTGCCTGGCACTGATGATCAGTTCTGTCTTCCAGTGCTCAAAGCAGGTAACAGCCTCGATTAACAGAGCTGATATGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR TCA 90 bp | GAAAGCACGCATATCAGCTCTGTTAATCGAGGCTGTTACCTGCTTTaGGCACTGGAAGACAGAACTGATCATCAGTGCCAGGCACTGGCG | + |
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Preference number: 1 (lower is better) Translates to: ESTHISSVNRGCYLL*ALEDRTDHQCQALA Trigger: CGCCAGTGCCTGGCACTGATGATCAGTTCTGTCTTCCAGTGCTCAAAGCAGGTAACAGCCTCGATTAACAGAGCTGATATGCGTGCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR GCA 90 bp | TCTTGTCCCCTCATTCTCAAACATCTTAGACAAATCCCAAGGGGCTaGAGCTGGAGGCCGCTTGCTGCAGATGACCTCGTGTTAAGTAAG | + |
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Preference number: 1 (lower is better) Translates to: SCPLILKHLRQIPRG*SWRPLAADDLVLSK Trigger: CTTACTTAACACGAGGTCATCTGCAGCAAGCGGCCTCCAGCTGCAGCCCCTTGGGATTTGTCTAAGATGTTTGAGAATGAGGGGACAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR TCA 90 bp | GCACAGACCTGTGCAAACGTTTGTGAATCTGCAAACCACACTTACTaGTACAAAGATGCTGGGATGACGGTCAGCAAGGACAGATGGGGA | + |
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Preference number: 1 (lower is better) Translates to: AQTCANVCESANHTY*YKDAGMTVSKDRWG Trigger: TCCCCATCTGTCCTTGCTGACCGTCATCCCAGCATCTTTGTATCAGTAAGTGTGGTTTGCAGATTCACAAACGTTTGCACAGGTCTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR GCA 90 bp | GAGATGAAAGCACGCATATCAGCTCTGTTAATCGAGGCTGTTACCTaGTTTGAGCACTGGAAGACAGAACTGATCATCAGTGCCAGGCAC | + |
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Preference number: 1 (lower is better) Translates to: EMKARISALLIEAVT*FEHWKTELIISARH Trigger: GTGCCTGGCACTGATGATCAGTTCTGTCTTCCAGTGCTCAAAGCAGGTAACAGCCTCGATTAACAGAGCTGATATGCGTGCTTTCATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR CCA 90 bp | CTTCTGCCTCTACCACCTGAATGCTGGGATTACAGATGTATACCATaGCCTCCAGCCCCCAAGGTTAAACTGACTCTGATTTTTCCCTCA | + |
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Preference number: 1 (lower is better) Translates to: LLPLPPECWDYRCIP*PPAPKVKLTLIFPS Trigger: TGAGGGAAAAATCAGAGTCAGTTTAACCTTGGGGGCTGGAGGCCATGGTATACATCTGTAATCCCAGCATTCAGGTGGTAGAGGCAGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR CCA 90 bp | AATGGCTATCATATTAAGAAGTTTTTCTACTGTGAAAAGCCAGCATaGGACCACGTTGGGCCCACACTGTGGGCGATGGAGCTCATGTTG | + |
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Preference number: 1 (lower is better) Translates to: NGYHIKKFFYCEKPA*DHVGPTLWAMELML Trigger: CAACATGAGCTCCATCGCCCACAGTGTGGGCCCAACGTGGTCCCATGCTGGCTTTTCACAGTAGAAAAACTTCTTAATATGATAGCCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR TCA 90 bp | AAATCTGAACTCCTTTTAAAGAGGAAGCTCATCAAAGTCCCAGACTaGCCCTGGGGAAATGTCCTAACCCAGTCAGTGTTTAGACTCTTG | + |
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Preference number: 1 (lower is better) Translates to: KSELLLKRKLIKVPD*PWGNVLTQSVFRLL Trigger: CAAGAGTCTAAACACTGACTGGGTTAGGACATTTCCCCAGGGTCAGTCTGGGACTTTGATGAGCTTCCTCTTTAAAAGGAGTTCAGATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR TCA 90 bp | CGCTGCGGCTCACTTCAGCCTCCATGTAGATACATACTCATTTCTTaGTTTGTATGTTTTCATAGGGAGGGGGAATGTGTGAGTTTGAGA | + |
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Preference number: 1 (lower is better) Translates to: RCGSLQPPCRYILIS*FVCFHREGECVSLR Trigger: TCTCAAACTCACACATTCCCCCTCCCTATGAAAACATACAAATCAAGAAATGAGTATGTATCTACATGGAGGCTGAAGTGAGCCGCAGCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR CAA 90 bp | GGCACTGGCGTCTCCCTGCCAGAGCTGAATCCTGTCGGCTTGTTCTaGTCATGCCCAGCCTATATGGAAAGAGAAGATGCCCTGACCAGC | + |
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Preference number: 2 (lower is better) Translates to: GTGVSLPELNPVGLF*SCPAYMEREDALTS Trigger: GCTGGTCAGGGCATCTTCTCTTTCCATATAGGCTGGGCATGACAAGAACAAGCCGACAGGATTCAGCTCTGGCAGGGAGACGCCAGTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR-3UTR TCA 90 bp | CACAATCCTGCTTCAGCCTCCAAGTGGCAATATTACCCAGCAGGCTCTCCAAGCGGAGACCCTGAGATGTaGGTCCTGCCTGCAAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: HNPASASKWQYYPAGSPSGDPEM*VLPAKA Trigger: AGCCTTTGCAGGCAGGACTCACATCTCAGGGTCTCC...GCTTGGAGAGCCTGCTGGGTAATATTGCCACTTGGAGGCTGAAGCAGGATTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR-3UTR TCA 90 bp | AAAGAGACCACTTCTCCACATGAAGGCCACGTGGTTGGGGGAACTGCAGGCCTGATCAAAGTCCCAGACTaGCCCTGGGGAAATGTCCTA | + |
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Preference number: 2 (lower is better) Translates to: KETTSPHEGHVVGGTAGLIKVPD*PWGNVL Trigger: TAGGACATTTCCCCAGGGTCAGTCTGGGACTTTGAT...CAGGCCTGCAGTTCCCCCAACCACGTGGCCTTCATGTGGAGAAGTGGTCTCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR-3UTR CCA 90 bp | TACACACACAATTGCAGCCACACTTCAGCCAGTTGCCTTGAGGTCAGAGACAAACACATGAAGGCCACGTaGTTGGGGGAACTGCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: YTHNCSHTSASCLEVRDKHMKAT*LGELQA Trigger: GGCCTGCAGTTCCCCCAACCACGTGGCCTTCATGTG...TTTGTCTCTGACCTCAAGGCAACTGGCTGAAGTGTGGCTGCAATTGTGTGTGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR-3UTR TCA 90 bp | AAAGAGACCACTTCTCCACATGAAGGCCACGTGGTTGGGGGAACTGCAGGCCTGAGCCCTGATACTGTCTaGTCATCCAGACAGAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: KETTSPHEGHVVGGTAGLSPDTV*SSRQKD Trigger: ATCTTTCTGTCTGGATGATCAGACAGTATCAGGGCT...CAGGCCTGCAGTTCCCCCAACCACGTGGCCTTCATGTGGAGAAGTGGTCTCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR-3UTR TCA 90 bp | CACAATCCTGCTTCAGCCTCCAAGTGGCAATATTACCCAGCAGGCTCTCCAAGCGTCTCAAGCAGAAAATaGCAAGGACAGCAGGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: HNPASASKWQYYPAGSPSVSSRK*QGQQAE Trigger: CTCAGCCTGCTGTCCTTGTCATTTTCTGCTTGAGAC...GCTTGGAGAGCCTGCTGGGTAATATTGCCACTTGGAGGCTGAAGCAGGATTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR-3UTR TCA 90 bp | ATCAGAAGACAACTTGCAGGAGTTTGTTCCCTGCTTCCACGCGTGGGTCCCAAGGCTGGTCTCAAACTTTaGTCCTTCTGCCTCTACCAC | + |
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Preference number: 2 (lower is better) Translates to: IRRQLAGVCSLLPRVGPKAGLKL*SFCLYH Trigger: GTGGTAGAGGCAGAAGGATCAAAGTTTGAGACCAGC...CTTGGGACCCACGCGTGGAAGCAGGGAACAAACTCCTGCAAGTTGTCTTCTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR-3UTR GCA 90 bp | TACACACACAATTGCAGCCACACTTCAGCCAGTTGCCTTGAGGTCAGAGACAAAGAGCTGCCATGTGGGTaGTGGGAATTGAACCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: YTHNCSHTSASCLEVRDKELPCG*WELNLG Trigger: ACCCAGGTTCAATTCCCAGCACCCACATGGCAGCTC...TTTGTCTCTGACCTCAAGGCAACTGGCTGAAGTGTGGCTGCAATTGTGTGTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR-3UTR GCA 90 bp | TACACACACAATTGCAGCCACACTTCAGCCAGTTGCCTTGAGGTCAGAGACAAACATCGGCGTTTGGCCTaGATGGTTGTGGGAGAGCAT | + |
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Preference number: 2 (lower is better) Translates to: YTHNCSHTSASCLEVRDKHRRLA*MVVGEH Trigger: ATGCTCTCCCACAACCATGCAGGCCAAACGCCGATG...TTTGTCTCTGACCTCAAGGCAACTGGCTGAAGTGTGGCTGCAATTGTGTGTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR CAA 90 bp | ACTGGAATTACAGACAGGTGTGAGCTGCCATGTGGGTGCTGGGAATaGAACCTGGGTCATCTGGAAGAGCAGCCAATGATCTTAACCACT | + |
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Preference number: 2 (lower is better) Translates to: TGITDRCELPCGCWE*NLGHLEEQPMILTT Trigger: AGTGGTTAAGATCATTGGCTGCTCTTCCAGATGACCCAGGTTCAATTCCCAGCACCCACATGGCAGCTCACACCTGTCTGTAATTCCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR-3UTR TCA 90 bp | TACACACACAATTGCAGCCACACTTCAGCCAGTTGCCTTGAGGTCAGAGACAAACTATCTCCCCCAGCATaGAGGAGCCTGGGTATTGAA | + |
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Preference number: 2 (lower is better) Translates to: YTHNCSHTSASCLEVRDKLSPPA*RSLGIE Trigger: TTCAATACCCAGGCTCCTTCATGCTGGGGGAGATAG...TTTGTCTCTGACCTCAAGGCAACTGGCTGAAGTGTGGCTGCAATTGTGTGTGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR-3UTR CCA 90 bp | CGCATATCAGCTCTGTTAATCGAGGCTGTTACCTGCTTTGAGCACTGGAAGACACTGCCATGTGGGTGCTaGGAATTGAACCTGGGTCAT | + |
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Preference number: 2 (lower is better) Translates to: RISALLIEAVTCFEHWKTLPCGC*ELNLGH Trigger: ATGACCCAGGTTCAATTCCCAGCACCCACATGGCAG...TGTCTTCCAGTGCTCAAAGCAGGTAACAGCCTCGATTAACAGAGCTGATATGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR-3UTR TCA 90 bp | ACCGCTCTCAAAACTGAAAGAAAGACCCATTGTGGAAAGCCAATAGAAAGGTTTATGGCCTGGAGACCCTaGGATGTGAGTCCTGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: TALKTERKTHCGKPIERFMAWRP*DVSPAC Trigger: GCAGGCAGGACTCACATCTCAGGGTCTCCAGGCCAT...AAACCTTTCTATTGGCTTTCCACAATGGGTCTTTCTTTCAGTTTTGAGAGCGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
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| 3UTR-3UTR TCA 90 bp | GCTCTGTTAATCGAGGCTGTTACCTGCTTTGAGCACTGGAAGACAGAACTGATCTCTGCCTCTACCACCTaGATGCTGGGATTACAGATG | + |
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Preference number: 2 (lower is better) Translates to: ALLIEAVTCFEHWKTELISASTT*MLGLQM Trigger: CATCTGTAATCCCAGCATTCAGGTGGTAGAGGCAGA...GATCAGTTCTGTCTTCCAGTGCTCAAAGCAGGTAACAGCCTCGATTAACAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR-3UTR GCA 90 bp | AATAGCCCAGGCTGGCTCCAAACTCACAATCCTGCTTCAGCCTCCAAGTGGCAATGGTCTTACTGTGAATaGTTTGAGGTACAGCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: NSPGWLQTHNPASASKWQWSYCE*FEVQLL Trigger: AAGCAGCTGTACCTCAAAGCATTCACAGTAAGACCA...TTGCCACTTGGAGGCTGAAGCAGGATTGTGAGTTTGGAGCCAGCCTGGGCTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR-3UTR GCA 90 bp | CGCATATCAGCTCTGTTAATCGAGGCTGTTACCTGCTTTGAGCACTGGAAGACACCAAACTCACAATCCTaGTTCAGCCTCCAAGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: RISALLIEAVTCFEHWKTPNSQS*FSLQVA Trigger: TGCCACTTGGAGGCTGAAGCAGGATTGTGAGTTTGG...TGTCTTCCAGTGCTCAAAGCAGGTAACAGCCTCGATTAACAGAGCTGATATGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR-3UTR CCA 90 bp | AAAGAGACCACTTCTCCACATGAAGGCCACGTGGTTGGGGGAACTGCAGGCCTGAAGAAAGACCCATTGTaGAAAGCCAATAGAAAGGTT | + |
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Preference number: 2 (lower is better) Translates to: KETTSPHEGHVVGGTAGLKKDPL*KANRKV Trigger: AACCTTTCTATTGGCTTTCCACAATGGGTCTTTCTT...CAGGCCTGCAGTTCCCCCAACCACGTGGCCTTCATGTGGAGAAGTGGTCTCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR-3UTR TCA 90 bp | TCCAAGCTCTCTTTTCATTCGCAAGGGTCCTTAAAGAGGCATTTGCTTAGCTGTGTTTTAGCCAACAGGTaGGGATGGCTTGCATGTCCC | + |
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Preference number: 2 (lower is better) Translates to: SKLSFHSQGSLKRHLLSCVLANR*GWLACP Trigger: GGGACATGCAAGCCATCCTCACCTGTTGGCTAAAAC...ACAGCTAAGCAAATGCCTCTTTAAGGACCCTTGCGAATGAAAAGAGAGCTTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR-3UTR CCA 90 bp | CGCATATCAGCTCTGTTAATCGAGGCTGTTACCTGCTTTGAGCACTGGAAGACACTCAATGGAAAAAGGTaGCCAGCTCCTGAGGAACAA | + |
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Preference number: 2 (lower is better) Translates to: RISALLIEAVTCFEHWKTLNGKR*PAPEEQ Trigger: TTGTTCCTCAGGAGCTGGCCACCTTTTTCCATTGAG...TGTCTTCCAGTGCTCAAAGCAGGTAACAGCCTCGATTAACAGAGCTGATATGCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR-3UTR TCA 90 bp | GCTCTGTTAATCGAGGCTGTTACCTGCTTTGAGCACTGGAAGACAGAACTGATCTCCCAAGTGCTGTGCTaGGATTACAGGTTTGAACTA | + |
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Preference number: 2 (lower is better) Translates to: ALLIEAVTCFEHWKTELISQVLC*DYRFEL Trigger: TAGTTCAAACCTGTAATCTCAGCACAGCACTTGGGA...GATCAGTTCTGTCTTCCAGTGCTCAAAGCAGGTAACAGCCTCGATTAACAGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR-3UTR GCA 90 bp | CGCATATCAGCTCTGTTAATCGAGGCTGTTACCTGCTTTGAGCACTGGAAGACACCTCTACCACCTGAATaGTGGGATTACAGATGTATA | + |
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Preference number: 2 (lower is better) Translates to: RISALLIEAVTCFEHWKTPLPPE*WDYRCI Trigger: TATACATCTGTAATCCCAGCATTCAGGTGGTAGAGG...TGTCTTCCAGTGCTCAAAGCAGGTAACAGCCTCGATTAACAGAGCTGATATGCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR-3UTR TCA 90 bp | CTCAGCCTCAAGGAACAGCACCACTGTAGCCTGGTTTCTGTCTCTGAGATGAAATGGAAGGGCATTAAGTaGAAGTTATACAACTATCTC | + |
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Preference number: 2 (lower is better) Translates to: LSLKEQHHCSLVSVSEMKWKGIK*KLYNYL Trigger: GAGATAGTTGTATAACTTTCACTTAATGCCCTTCCA...TTTCATCTCAGAGACAGAAACCAGGCTACAGTGGTGCTGTTCCTTGAGGCTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR-3UTR TCA 90 bp | GCTCTGTTAATCGAGGCTGTTACCTGCTTTGAGCACTGGAAGACAGAACTGATCGAACTTGCAGGTAGATaGAAGGAATTTTCAAGGGTA | + |
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Preference number: 2 (lower is better) Translates to: ALLIEAVTCFEHWKTELIELAGR*KEFSRV Trigger: TACCCTTGAAAATTCCTTTCATCTACCTGCAAGTTC...GATCAGTTCTGTCTTCCAGTGCTCAAAGCAGGTAACAGCCTCGATTAACAGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR-3UTR TCA 90 bp | CGCATATCAGCTCTGTTAATCGAGGCTGTTACCTGCTTTGAGCACTGGAAGACAGCTTCTACAAGTTTTTaGTTGGGCAAACTCAATAGT | + |
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Preference number: 2 (lower is better) Translates to: RISALLIEAVTCFEHWKTASTSF*LGKLNS Trigger: ACTATTGAGTTTGCCCAATCAAAAACTTGTAGAAGC...TGTCTTCCAGTGCTCAAAGCAGGTAACAGCCTCGATTAACAGAGCTGATATGCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR-3UTR GCA 90 bp | TCTTACTGTGAATGCTTTGAGGTACAGCTGCTTCCACACCCCCAATGCAAGACTAAAAATTTAGAAGGATaGCAGGAATCACATGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: SYCECFEVQLLPHPQCKTKNLEG*QESHVQ Trigger: CTGGACATGTGATTCCTGGCATCCTTCTAAATTTTT...AGTCTTGCATTGGGGGTGTGGAAGCAGCTGTACCTCAAAGCATTCACAGTAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR-3UTR GCA 90 bp | CACACAAGTGAAGATCAGAAGACAACTTGCAGGAGTTTGTTCCCTGCTTCCACGAGACAGAAAGATACTTaGTTACATCTCAGGATGAAA | + |
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Preference number: 2 (lower is better) Translates to: HTSEDQKTTCRSLFPASTRQKDT*LHLRMK Trigger: TTTCATCCTGAGATGTAAGCAAGTATCTTTCTGTCT...CGTGGAAGCAGGGAACAAACTCCTGCAAGTTGTCTTCTGATCTTCACTTGTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR-3UTR CCA 90 bp | CACACACACACCACAACTTATATGACAGTTACTCTGAGAGATTATGTCACAATACCATTTCCCTGTGGCTaGAATAGCACTCCCATGAAA | + |
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Preference number: 2 (lower is better) Translates to: HTHTTTYMTVTLRDYVTIPFPCG*NSTPMK Trigger: TTTCATGGGAGTGCTATTCCAGCCACAGGGAAATGG...TATTGTGACATAATCTCTCAGAGTAACTGTCATATAAGTTGTGGTGTGTGTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR-3UTR TCA 90 bp | GAGTTTACAATTCCAGAATTAGAAAGGATAAGACAGACAGATCTCTGGAGTTCATACCGCTCTCAAAACTaGAAGAAAGACCCATTGTGG | + |
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Preference number: 2 (lower is better) Translates to: EFTIPELERIRQTDLWSSYRSQN*KKDPLW Trigger: CCACAATGGGTCTTTCTTTCAGTTTTGAGAGCGGTA...TGAACTCCAGAGATCTGTCTGTCTTATCCTTTCTAATTCTGGAATTGTAAACTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| 3UTR TCA 72 bp | AGGTTTCCCAGCACATGGCCTGGAGACCCTGAGATGTaGGTCCTGCCTGCAAAGGCTGGCGAGAGAAGCCCT | + |
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Preference number: 3 (lower is better) Translates to: RFPSTWPGDPEM*VLPAKAGERSP Trigger: AGGGCTTCTCTCGCCAGCCTTTGCAGGCAGGACTCACATCTCAGGGTCTCCAGGCCATGTGCTGGGAAACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
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| 3UTR CCA 72 bp | GAAAAGCCAGCATGGGACCACGTTGGGCCCACACTGTaGGCGATGGAGCTCATGTTGAAGGTGAGCACATCC | + |
|
Preference number: 3 (lower is better) Translates to: EKPAWDHVGPTL*AMELMLKVSTS Trigger: GGATGTGCTCACCTTCAACATGAGCTCCATCGCCCACAGTGTGGGCCCAACGTGGTCCCATGCTGGCTTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| 3UTR TCA 72 bp | CAGTCTCTTGGAGGAGAAAGAGACCACTTCTCCACATaGAGGCCACGTGGTTGGGGGAACTGCAGGCCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: QSLGGERDHFST*RPRGWGNCRPE Trigger: CTCAGGCCTGCAGTTCCCCCAACCACGTGGCCTTCATGTGGAGAAGTGGTCTCTTTCTCCTCCAAGAGACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| 3UTR CCA 72 bp | CACTGGAAGACAGAACTGATCATCAGTGCCAGGCACTaGCGTCTCCCTGCCAGAGCTGAATCCTGTCGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: HWKTELIISARH*RLPARAESCRL Trigger: AAGCCGACAGGATTCAGCTCTGGCAGGGAGACGCCAGTGCCTGGCACTGATGATCAGTTCTGTCTTCCAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| 3UTR-3UTR CAA 90 bp | CATTGTGGAAAGCCAATAGAAAGGTTTCCCAGCACATGGCCTGGAGACCCTGAGCCCCAGCCTTTCTCCTaGGCAGTGATTCTGTGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: HCGKPIERFPSTWPGDPEPQPFS*AVILWG Trigger: GCCCCACAGAATCACTGCCAAGGAGAAAGGCTGGGG...CTCAGGGTCTCCAGGCCATGTGCTGGGAAACCTTTCTATTGGCTTTCCACAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| 3UTR TCA 72 bp | AGGCTGTTACCTGCTTTGAGCACTGGAAGACAGAACTaGTCATCAGTGCCAGGCACTGGCGTCTCCCTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: RLLPALSTGRQN*SSVPGTGVSLP Trigger: TGGCAGGGAGACGCCAGTGCCTGGCACTGATGATCAGTTCTGTCTTCCAGTGCTCAAAGCAGGTAACAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| 3UTR GCA 72 bp | GGGACACAGCACACAAGTGAAGATCAGAAGACAACTTaGAGGAGTTTGTTCCCTGCTTCCACGCGTGGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: GTQHTSEDQKTT*RSLFPASTRGS Trigger: GGACCCACGCGTGGAAGCAGGGAACAAACTCCTGCAAGTTGTCTTCTGATCTTCACTTGTGTGCTGTGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| 3UTR-3UTR CAA 90 bp | CACACAAGTGAAGATCAGAAGACAACTTGCAGGAGTTTGTTCCCTGCTTCCACGCCCCAGCCTTTCTCCTaGGCAGTGATTCTGTGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: HTSEDQKTTCRSLFPASTPQPFS*AVILWG Trigger: GCCCCACAGAATCACTGCCAAGGAGAAAGGCTGGGG...CGTGGAAGCAGGGAACAAACTCCTGCAAGTTGTCTTCTGATCTTCACTTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| 3UTR GCA 72 bp | ACTGGAATTACAGACAGGTGTGAGCTGCCATGTGGGTaGTGGGAATTGAACCTGGGTCATCTGGAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: TGITDRCELPCG*WELNLGHLEEQ Trigger: CTGCTCTTCCAGATGACCCAGGTTCAATTCCCAGCACCCACATGGCAGCTCACACCTGTCTGTAATTCCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| 3UTR GCA 72 bp | CTGCCAGAGCTGAATCCTGTCGGCTTGTTCTTGTCATaGCCAGCCTATATGGAAAGAGAAGATGCCCTGACC | + |
|
Preference number: 3 (lower is better) Translates to: LPELNPVGLFLS*PAYMEREDALT Trigger: GGTCAGGGCATCTTCTCTTTCCATATAGGCTGGGCATGACAAGAACAAGCCGACAGGATTCAGCTCTGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| 3UTR CCA 72 bp | CTCAAACATCTTAGACAAATCCCAAGGGGCTGCAGCTaGAGGCCGCTTGCTGCAGATGACCTCGTGTTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: LKHLRQIPRGCS*RPLAADDLVLS Trigger: ACTTAACACGAGGTCATCTGCAGCAAGCGGCCTCCAGCTGCAGCCCCTTGGGATTTGTCTAAGATGTTTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| 3UTR CCA 72 bp | GACAACTTGCAGGAGTTTGTTCCCTGCTTCCACGCGTaGGTCCCAAGAACAGAACTCAGATTGTCAGGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: DNLQEFVPCFHA*VPRTELRLSGE Trigger: CTCACCTGACAATCTGAGTTCTGTTCTTGGGACCCACGCGTGGAAGCAGGGAACAAACTCCTGCAAGTTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| 3UTR CCA 72 bp | CCCTGGAACTGGAGTTACAGTTATGAGCTGCCAATGTaGGTGCTGGGAGTGGAGTCCAGGTCCTCTGTAATT | + |
|
Preference number: 3 (lower is better) Translates to: PWNWSYSYELPM*VLGVESRSSVI Trigger: AATTACAGAGGACCTGGACTCCACTCCCAGCACCCACATTGGCAGCTCATAACTGTAACTCCAGTTCCAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| 3UTR CCA 72 bp | TGGCTCCAAACTCACAATCCTGCTTCAGCCTCCAAGTaGCAATATTACCCAGCAGGCTCTCCAAGCTCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: WLQTHNPASASK*QYYPAGSPSSL Trigger: AAGAGAGCTTGGAGAGCCTGCTGGGTAATATTGCCACTTGGAGGCTGAAGCAGGATTGTGAGTTTGGAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| 3UTR CCA 72 bp | GCTCTGTTAATCGAGGCTGTTACCTGCTTTGAGCACTaGAAGACAGAACTGATCATCAGTGCCAGGCACTGG | + |
|
Preference number: 3 (lower is better) Translates to: ALLIEAVTCFEH*KTELIISARHW Trigger: CCAGTGCCTGGCACTGATGATCAGTTCTGTCTTCCAGTGCTCAAAGCAGGTAACAGCCTCGATTAACAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| 3UTR-3UTR CAA 90 bp | CACAATCCTGCTTCAGCCTCCAAGTGGCAATATTACCCAGCAGGCTCTCCAAGCTTCTCTTACTGTTGTTaGTGTGTGTGTGTGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: HNPASASKWQYYPAGSPSFSYCC*CVCVCV Trigger: CACACACACACACACACACAAACAACAGTAAGAGAA...GCTTGGAGAGCCTGCTGGGTAATATTGCCACTTGGAGGCTGAAGCAGGATTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| 3UTR TCA 72 bp | CCTGCAAAGGCTGGCGAGAGAAGCCCTGATACTGTCTaGTCATCCAGACAGAAAGATACTTGCTTACATCTC | + |
|
Preference number: 3 (lower is better) Translates to: PAKAGERSPDTV*SSRQKDTCLHL Trigger: GAGATGTAAGCAAGTATCTTTCTGTCTGGATGATCAGACAGTATCAGGGCTTCTCTCGCCAGCCTTTGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| 3UTR GCA 72 bp | TCTCAAACTTTGATCCTTCTGCCTCTACCACCTGAATaGTGGGATTACAGATGTATACCATGGCCTCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: SQTLILLPLPPE*WDYRCIPWPPA Trigger: GGCTGGAGGCCATGGTATACATCTGTAATCCCAGCATTCAGGTGGTAGAGGCAGAAGGATCAAAGTTTGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| 3UTR CCA 72 bp | CTACCACCTGAATGCTGGGATTACAGATGTATACCATaGCCTCCAGCCCCCAAGGTTAAACTGACTCTGATT | + |
|
Preference number: 3 (lower is better) Translates to: LPPECWDYRCIP*PPAPKVKLTLI Trigger: AATCAGAGTCAGTTTAACCTTGGGGGCTGGAGGCCATGGTATACATCTGTAATCCCAGCATTCAGGTGGTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| 3UTR CCA 72 bp | TACACTCATAAAGCTTGTATATTTTCCTTGCAGTGCTaGGGCCCAGACCCAGGACCTTGGCTGTATGCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: YTHKACIFSLQC*GPDPGPWLYAK Trigger: CTTAGCATACAGCCAAGGTCCTGGGTCTGGGCCCCAGCACTGCAAGGAAAATATACAAGCTTTATGAGTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| 3UTR-3UTR CAA 90 bp | CACACAAGTGAAGATCAGAAGACAACTTGCAGGAGTTTGTTCCCTGCTTCCACGCTTACTGTGAATGCTTaGAGGTACAGCTGCTTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: HTSEDQKTTCRSLFPASTLTVNA*RYSCFH Trigger: GTGGAAGCAGCTGTACCTCAAAGCATTCACAGTAAG...CGTGGAAGCAGGGAACAAACTCCTGCAAGTTGTCTTCTGATCTTCACTTGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| 3UTR TCA 72 bp | CCTAGTCTCAAGCAGAAAATGACAAGGACAGCAGGCTaGGGGCGGAGTCCAAGAAACATCACATTAAGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: PSLKQKMTRTAG*GRSPRNITLRN Trigger: GTTTCTTAATGTGATGTTTCTTGGACTCCGCCCTCAGCCTGCTGTCCTTGTCATTTTCTGCTTGAGACTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| 3UTR TCA 72 bp | CTCCTTTTAAAGAGGAAGCTCATCAAAGTCCCAGACTaGCCCTGGGGAAATGTCCTAACCCAGTCAGTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: LLLKRKLIKVPD*PWGNVLTQSVF Trigger: AAACACTGACTGGGTTAGGACATTTCCCCAGGGTCAGTCTGGGACTTTGATGAGCTTCCTCTTTAAAAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| 3UTR TCA 72 bp | CATATCAGCTCTGTTAATCGAGGCTGTTACCTGCTTTaGGCACTGGAAGACAGAACTGATCATCAGTGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: HISSVNRGCYLL*ALEDRTDHQCQ Trigger: CTGGCACTGATGATCAGTTCTGTCTTCCAGTGCTCAAAGCAGGTAACAGCCTCGATTAACAGAGCTGATATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| 3UTR TCA 72 bp | CTGCAAACCACACTTACTGATACAAAGATGCTGGGATaGCGGTCAGCAAGGACAGATGGGGAAATCACTAAG | + |
|
Preference number: 3 (lower is better) Translates to: LQTTLTDTKMLG*RSARTDGEITK Trigger: CTTAGTGATTTCCCCATCTGTCCTTGCTGACCGTCATCCCAGCATCTTTGTATCAGTAAGTGTGGTTTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| 3UTR GCA 72 bp | GCACGCATATCAGCTCTGTTAATCGAGGCTGTTACCTaGTTTGAGCACTGGAAGACAGAACTGATCATCAGT | + |
|
Preference number: 3 (lower is better) Translates to: ARISALLIEAVT*FEHWKTELIIS Trigger: ACTGATGATCAGTTCTGTCTTCCAGTGCTCAAAGCAGGTAACAGCCTCGATTAACAGAGCTGATATGCGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| 3UTR CCA 72 bp | TTCTGTTTGGAGGAAAGTTGCCCAGCTCCTAAGCCATaGTCTTACTGTGAATGCTTTGAGGTACAGCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: FCLEESCPAPKP*SYCECFEVQLL Trigger: AAGCAGCTGTACCTCAAAGCATTCACAGTAAGACCATGGCTTAGGAGCTGGGCAACTTTCCTCCAAACAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| 3UTR CCA 72 bp | CAGTGGTCAAATCAAAGCGGGCCATTTCCCTGTGGCTaGAATAGCACTCCCATGAAATCTGAACTCCTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: QWSNQSGPFPCG*NSTPMKSELLL Trigger: TAAAAGGAGTTCAGATTTCATGGGAGTGCTATTCCAGCCACAGGGAAATGGCCCGCTTTGATTTGACCACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| 3UTR TCA 72 bp | TGTGCAAACGTTTGTGAATCTGCAAACCACACTTACTaGTACAAAGATGCTGGGATGACGGTCAGCAAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: CANVCESANHTY*YKDAGMTVSKD Trigger: GTCCTTGCTGACCGTCATCCCAGCATCTTTGTATCAGTAAGTGTGGTTTGCAGATTCACAAACGTTTGCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| 3UTR CCA 72 bp | ATTTTTATGTCCATCGGCGTTTGGCCTGCATGGTTGTaGGAGAGCATCGGATCCTTAAAACTGGAATTACAG | + |
|
Preference number: 3 (lower is better) Translates to: IFMSIGVWPAWL*ESIGSLKLELQ Trigger: CTGTAATTCCAGTTTTAAGGATCCGATGCTCTCCCACAACCATGCAGGCCAAACGCCGATGGACATAAAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| 3UTR-3UTR CAA 90 bp | TACACACACAATTGCAGCCACACTTCAGCCAGTTGCCTTGAGGTCAGAGACAAATCATTTCTCTTACTGTaGTTTGTGTGTGTGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: YTHNCSHTSASCLEVRDKSFLLL*FVCVCV Trigger: CACACACACACACACAAACAACAGTAAGAGAAATGA...TTTGTCTCTGACCTCAAGGCAACTGGCTGAAGTGTGGCTGCAATTGTGTGTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| 3UTR TCA 72 bp | GCCTATATGGAAAGAGAAGATGCCCTGACCAGCTTTTaGAGGTCTAAGACTAAGTTTGGAAGGAGAAACAGC | + |
|
Preference number: 3 (lower is better) Translates to: AYMEREDALTSF*RSKTKFGRRNS Trigger: GCTGTTTCTCCTTCCAAACTTAGTCTTAGACCTTCAAAAGCTGGTCAGGGCATCTTCTCTTTCCATATAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| 3UTR TCA 72 bp | TGTCATGCCCAGCCTATATGGAAAGAGAAGATGCCCTaGCCAGCTTTTGAAGGTCTAAGACTAAGTTTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: CHAQPIWKEKMP*PAFEGLRLSLE Trigger: TTCCAAACTTAGTCTTAGACCTTCAAAAGCTGGTCAGGGCATCTTCTCTTTCCATATAGGCTGGGCATGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| 3UTR-3UTR CAA 90 bp | CACACACACACCACAACTTATATGACAGTTACTCTGAGAGATTATGTCACAATAGAAGGAGCCTGGGTATaGAACCATCTCACATCCACT | + |
|
Preference number: 3 (lower is better) Translates to: HTHTTTYMTVTLRDYVTIEGAWV*NHLTST Trigger: AGTGGATGTGAGATGGTTCAATACCCAGGCTCCTTC...TATTGTGACATAATCTCTCAGAGTAACTGTCATATAAGTTGTGGTGTGTGTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| 3UTR TCA 72 bp | AGCACATACTCTAATCCTGTCTCATTGAAATTTCCCTaGTACCTGTTGCAAAATGGAATGCGCCATCACAGT | + |
|
Preference number: 3 (lower is better) Translates to: STYSNPVSLKFP*YLLQNGMRHHS Trigger: ACTGTGATGGCGCATTCCATTTTGCAACAGGTATCAGGGAAATTTCAATGAGACAGGATTAGAGTATGTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| 3UTR GCA 72 bp | TTTATGATTTATTTTTATGTCCATCGGCGTTTGGCCTaGATGGTTGTGGGAGAGCATCGGATCCTTAAAACT | + |
|
Preference number: 3 (lower is better) Translates to: FMIYFYVHRRLA*MVVGEHRILKT Trigger: AGTTTTAAGGATCCGATGCTCTCCCACAACCATGCAGGCCAAACGCCGATGGACATAAAAATAAATCATAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| 3UTR TCA 72 bp | TCACTTCAGCCTCCATGTAGATACATACTCATTTCTTaGTTTGTATGTTTTCATAGGGAGGGGGAATGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: SLQPPCRYILIS*FVCFHREGECV Trigger: CACACATTCCCCCTCCCTATGAAAACATACAAATCAAGAAATGAGTATGTATCTACATGGAGGCTGAAGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS-3UTR GCA 90 bp | GGCCTGGAGACCCTGAGATGTGAGTCCTGCCTGCAAAGGCTGGCGAGAGAAGCCGAGGGCCTCGGCAGGTaGAGGCGGGAGGGATTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLETLRCESCLQRLAREAEGLGR*RREGLS Trigger: GCTCAATCCCTCCCGCCTGCACCTGCCGAGGCCCTC...GGCTTCTCTCGCCAGCCTTTGCAGGCAGGACTCACATCTCAGGGTCTCCAGGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR CCA 90 bp | GGCCTGGAGACCCTGAGATGTGAGTCCTGCCTGCAAAGGCTGGCGAGAGAAGCCGCTCGATGTAGCGCTTaGCCACGTAGTTGGAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GLETLRCESCLQRLAREAARCSA*PRSWRP Trigger: GGGCCTCCAACTACGTGGCCAAGCGCTACATCGAGC...GGCTTCTCTCGCCAGCCTTTGCAGGCAGGACTCACATCTCAGGGTCTCCAGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR TCA 90 bp | GGCCTGGAGACCCTGAGATGTGAGTCCTGCCTGCAAAGGCTGGCGAGAGAAGCCGTAAGGCCCATGCTCTaGCAAATCCGGTTGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLETLRCESCLQRLAREAVRPML*QIRLQA Trigger: TGCCTGCAACCGGATTTGTCAGAGCATGGGCCTTAC...GGCTTCTCTCGCCAGCCTTTGCAGGCAGGACTCACATCTCAGGGTCTCCAGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR GCA 90 bp | GGCCTGGAGACCCTGAGATGTGAGTCCTGCCTGCAAAGGCTGGCGAGAGAAGCCCAGGGGTCAGGCATGTaGTTGGCTTTCTCGATCGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLETLRCESCLQRLAREAQGSGM*LAFSIA Trigger: TGCGATCGAGAAAGCCAAGCACATGCCTGACCCCTG...GGCTTCTCTCGCCAGCCTTTGCAGGCAGGACTCACATCTCAGGGTCTCCAGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR CCA 90 bp | GGCCTGGAGACCCTGAGATGTGAGTCCTGCCTGCAAAGGCTGGCGAGAGAAGCCCAGGCTTCCTTGAAGTaGAAGGAGCTGGCTGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GLETLRCESCLQRLAREAQASLK*KELAGD Trigger: GTCACCAGCCAGCTCCTTCCACTTCAAGGAAGCCTG...GGCTTCTCTCGCCAGCCTTTGCAGGCAGGACTCACATCTCAGGGTCTCCAGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR CCA 90 bp | GGCCTGGAGACCCTGAGATGTGAGTCCTGCCTGCAAAGGCTGGCGAGAGAAGCCGTCTTGACACCTGTCTaGGCTGAGGTTCAGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GLETLRCESCLQRLAREAVLTPV*AEVQAS Trigger: ACTGGCCTGAACCTCAGCCCAGACAGGTGTCAAGAC...GGCTTCTCTCGCCAGCCTTTGCAGGCAGGACTCACATCTCAGGGTCTCCAGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR GCA 90 bp | GGCCTGGAGACCCTGAGATGTGAGTCCTGCCTGCAAAGGCTGGCGAGAGAAGCCTTCTCCCAGGTCAGCTaGATGCTCCAGATGGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GLETLRCESCLQRLAREAFSQVS*MLQMED Trigger: ATCTTCCATCTGGAGCATGCAGCTGACCTGGGAGAA...GGCTTCTCTCGCCAGCCTTTGCAGGCAGGACTCACATCTCAGGGTCTCCAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR CCA 90 bp | GGCCTGGAGACCCTGAGATGTGAGTCCTGCCTGCAAAGGCTGGCGAGAGAAGCCCCCTCAAGATGGTCTTaGCTGATTGCAATAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLETLRCESCLQRLAREAPSRWS*LIAIAW Trigger: CCAGGCTATTGCAATCAGCCAAGACCATCTTGAGGG...GGCTTCTCTCGCCAGCCTTTGCAGGCAGGACTCACATCTCAGGGTCTCCAGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR TCA 90 bp | TGGGTGCTGGGAATTGAACCTGGGTCATCTGGAAGAGCAGCCAATGATCTTAACGAAGGAGCTGGCTGGTaGCCCTGTGGAGCCGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: WVLGIEPGSSGRAANDLNEGAGW*PCGAAL Trigger: GAGTGCGGCTCCACAGGGTCACCAGCCAGCTCCTTC...GTTAAGATCATTGGCTGCTCTTCCAGATGACCCAGGTTCAATTCCCAGCACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS-3UTR TCA 90 bp | GGCCTGGAGACCCTGAGATGTGAGTCCTGCCTGCAAAGGCTGGCGAGAGAAGCCTTGGAGCTGACATTCTaGTTGGACATGTGGTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: GLETLRCESCLQRLAREALELTF*LDMWSS Trigger: TGATGACCACATGTCCAATCAGAATGTCAGCTCCAA...GGCTTCTCTCGCCAGCCTTTGCAGGCAGGACTCACATCTCAGGGTCTCCAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR GCA 90 bp | CGCATATCAGCTCTGTTAATCGAGGCTGTTACCTGCTTTGAGCACTGGAAGACACTCCCTGGCCAGCAGTaGGTACTGGGGCTCGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RISALLIEAVTCFEHWKTLPGQQ*VLGLVL Trigger: CAGGACGAGCCCCAGTACGCACTGCTGGCCAGGGAG...TGTCTTCCAGTGCTCAAAGCAGGTAACAGCCTCGATTAACAGAGCTGATATGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS-3UTR CCA 90 bp | CATTGTGGAAAGCCAATAGAAAGGTTTCCCAGCACATGGCCTGGAGACCCTGAGAAGCGCCCGCCCTCGTaGTATCGCACCATGGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HCGKPIERFPSTWPGDPEKRPPS*YRTMAK Trigger: TTTGGCCATGGTGCGATACCACGAGGGCGGGCGCTT...CTCAGGGTCTCCAGGCCATGTGCTGGGAAACCTTTCTATTGGCTTTCCACAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR CCA 90 bp | CGCATATCAGCTCTGTTAATCGAGGCTGTTACCTGCTTTGAGCACTGGAAGACAGCATCTCCGCCTCCCTaGCCAGCAGTGCGTACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RISALLIEAVTCFEHWKTASPPP*PAVRTG Trigger: CCCAGTACGCACTGCTGGCCAGGGAGGCGGAGATGC...TGTCTTCCAGTGCTCAAAGCAGGTAACAGCCTCGATTAACAGAGCTGATATGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS-3UTR GCA 90 bp | ATCAGAAGACAACTTGCAGGAGTTTGTTCCCTGCTTCCACGCGTGGGTCCCAAGCAGGGGTCAGGCATGTaGTTGGCTTTCTCGATCGCA | + |
|
Preference number: 4 (lower is better) Translates to: IRRQLAGVCSLLPRVGPKQGSGM*LAFSIA Trigger: TGCGATCGAGAAAGCCAAGCACATGCCTGACCCCTG...CTTGGGACCCACGCGTGGAAGCAGGGAACAAACTCCTGCAAGTTGTCTTCTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS-3UTR GCA 90 bp | CATTGTGGAAAGCCAATAGAAAGGTTTCCCAGCACATGGCCTGGAGACCCTGAGGAGGCCCCCTTCCATTaGTGGGCGTGCAAGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HCGKPIERFPSTWPGDPEEAPFH*WACKKL Trigger: CAACTTCTTGCACGCCCAGCAATGGAAGGGGGCCTC...CTCAGGGTCTCCAGGCCATGTGCTGGGAAACCTTTCTATTGGCTTTCCACAATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR GCA 90 bp | GGCCTGGAGACCCTGAGATGTGAGTCCTGCCTGCAAAGGCTGGCGAGAGAAGCCTCAATGATGCACATCTaGATGATATCCACCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GLETLRCESCLQRLAREASMMHI*MISTCL Trigger: CAAGCAGGTGGATATCATGCAGATGTGCATCATTGA...GGCTTCTCTCGCCAGCCTTTGCAGGCAGGACTCACATCTCAGGGTCTCCAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| 3UTR CAA 72 bp | ACAGACAGGTGTGAGCTGCCATGTGGGTGCTGGGAATaGAACCTGGGTCATCTGGAAGAGCAGCCAATGATC | + |
|
Preference number: 4 (lower is better) Translates to: TDRCELPCGCWE*NLGHLEEQPMI Trigger: GATCATTGGCTGCTCTTCCAGATGACCCAGGTTCAATTCCCAGCACCCACATGGCAGCTCACACCTGTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS-3UTR GCA 90 bp | TCTTACTGTGAATGCTTTGAGGTACAGCTGCTTCCACACCCCCAATGCAAGACTGAAGCACTCCCTCATTaGTCCACGGCCGAAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SYCECFEVQLLPHPQCKTEALPH*STAEGL Trigger: CAGCCCTTCGGCCGTGGAGCAATGAGGGAGTGCTTC...AGTCTTGCATTGGGGGTGTGGAAGCAGCTGTACCTCAAAGCATTCACAGTAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS-3UTR CCA 90 bp | CATTGTGGAAAGCCAATAGAAAGGTTTCCCAGCACATGGCCTGGAGACCCTGAGGTCTTGACACCTGTCTaGGCTGAGGTTCAGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HCGKPIERFPSTWPGDPEVLTPV*AEVQAS Trigger: ACTGGCCTGAACCTCAGCCCAGACAGGTGTCAAGAC...CTCAGGGTCTCCAGGCCATGTGCTGGGAAACCTTTCTATTGGCTTTCCACAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR CCA 90 bp | CATTGTGGAAAGCCAATAGAAAGGTTTCCCAGCACATGGCCTGGAGACCCTGAGTCTCGTAGTACTGGTTaGCTAGCCGGCCCTTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: HCGKPIERFPSTWPGDPESRSTG*LAGPSW Trigger: CCATGAAGGGCCGGCTAGCCAACCAGTACTACGAGA...CTCAGGGTCTCCAGGCCATGTGCTGGGAAACCTTTCTATTGGCTTTCCACAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| 3UTR CAA 72 bp | GCCCAGCTCCTAAGCCATGGTCTTACTGTGAATGCTTaGAGGTACAGCTGCTTCCACACCCCCAATGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: AQLLSHGLTVNA*RYSCFHTPNAR Trigger: TCTTGCATTGGGGGTGTGGAAGCAGCTGTACCTCAAAGCATTCACAGTAAGACCATGGCTTAGGAGCTGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| 3UTR CAA 72 bp | GTCTCCCTGCCAGAGCTGAATCCTGTCGGCTTGTTCTaGTCATGCCCAGCCTATATGGAAAGAGAAGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: VSLPELNPVGLF*SCPAYMEREDA Trigger: GGCATCTTCTCTTTCCATATAGGCTGGGCATGACAAGAACAAGCCGACAGGATTCAGCTCTGGCAGGGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS-3UTR GCA 90 bp | CACACAAGTGAAGATCAGAAGACAACTTGCAGGAGTTTGTTCCCTGCTTCCACGGAGGCCCCCTTCCATTaGTGGGCGTGCAAGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HTSEDQKTTCRSLFPASTEAPFH*WACKKL Trigger: CAACTTCTTGCACGCCCAGCAATGGAAGGGGGCCTC...CGTGGAAGCAGGGAACAAACTCCTGCAAGTTGTCTTCTGATCTTCACTTGTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS-3UTR CCA 90 bp | CACACAAGTGAAGATCAGAAGACAACTTGCAGGAGTTTGTTCCCTGCTTCCACGGCCCCCTTCCATTGCTaGGCGTGCAAGAAGTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HTSEDQKTTCRSLFPASTAPFHC*ACKKLE Trigger: CTCCAACTTCTTGCACGCCCAGCAATGGAAGGGGGC...CGTGGAAGCAGGGAACAAACTCCTGCAAGTTGTCTTCTGATCTTCACTTGTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS-3UTR CCA 90 bp | CACAATCCTGCTTCAGCCTCCAAGTGGCAATATTACCCAGCAGGCTCTCCAAGCTTGTCCATGCGGTCATaGTCTCTAGGGCCCATGTTA | + |
|
Preference number: 4 (lower is better) Translates to: HNPASASKWQYYPAGSPSLSMRS*SLGPML Trigger: TAACATGGGCCCTAGAGACCATGACCGCATGGACAA...GCTTGGAGAGCCTGCTGGGTAATATTGCCACTTGGAGGCTGAAGCAGGATTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS-3UTR CCA 90 bp | CATTGTGGAAAGCCAATAGAAAGGTTTCCCAGCACATGGCCTGGAGACCCTGAGGCTGCCTCAGCTGCCTaGGTGTACAAATCTCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: HCGKPIERFPSTWPGDPEAASAA*VYKSPD Trigger: ATCAGGAGATTTGTACACCCAGGCAGCTGAGGCAGC...CTCAGGGTCTCCAGGCCATGTGCTGGGAAACCTTTCTATTGGCTTTCCACAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR CCA 90 bp | CGCATATCAGCTCTGTTAATCGAGGCTGTTACCTGCTTTGAGCACTGGAAGACACTAGCCGGCCCTTCATaGCTTCCATTGCTGCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RISALLIEAVTCFEHWKTLAGPS*LPLLPQ Trigger: CTGAGGCAGCAATGGAAGCCATGAAGGGCCGGCTAG...TGTCTTCCAGTGCTCAAAGCAGGTAACAGCCTCGATTAACAGAGCTGATATGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS-3UTR TCA 90 bp | TCCAAGCTCTCTTTTCATTCGCAAGGGTCCTTAAAGAGGCATTTGCTTAGCTGTGCTGTGTGGTGTAGCTaGAGACGGGGAGGAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SKLSFHSQGSLKRHLLSCAVWCS*RRGGRQ Trigger: CTGCCTTCCTCCCCGTCTTCAGCTACACCACACAGC...ACAGCTAAGCAAATGCCTCTTTAAGGACCCTTGCGAATGAAAAGAGAGCTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS-3UTR TCA 90 bp | TCCAAGCTCTCTTTTCATTCGCAAGGGTCCTTAAAGAGGCATTTGCTTAGCTGTGCAGCTGAGAGTACATaGGGCCTAGGCCCACGATGG | + |
|
Preference number: 4 (lower is better) Translates to: SKLSFHSQGSLKRHLLSCAAEST*GLGPRW Trigger: CCATCGTGGGCCTAGGCCTCATGTACTCTCAGCTGC...ACAGCTAAGCAAATGCCTCTTTAAGGACCCTTGCGAATGAAAAGAGAGCTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS-3UTR GCA 90 bp | CAACATACCGCTCTCAAAACTGAAAGAAAGACCCATTGTGGAAAGCCAATAGAACTCCCTGGCCAGCAGTaGGTACTGGGGCTCGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QHTALKTERKTHCGKPIELPGQQ*VLGLVL Trigger: CAGGACGAGCCCCAGTACGCACTGCTGGCCAGGGAG...TTCTATTGGCTTTCCACAATGGGTCTTTCTTTCAGTTTTGAGAGCGGTATGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR CCA 90 bp | CTCAGCCTCAAGGAACAGCACCACTGTAGCCTGGTTTCTGTCTCTGAGATGAAAACTTCGCTTCTCGCTTaGATACCCACTGTCCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LSLKEQHHCSLVSVSEMKTSLLA*IPTVPT Trigger: AGTGGGGACAGTGGGTATCCAAGCGAGAAGCGAAGT...TTTCATCTCAGAGACAGAAACCAGGCTACAGTGGTGCTGTTCCTTGAGGCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS-3UTR CCA 90 bp | CAACATACCGCTCTCAAAACTGAAAGAAAGACCCATTGTGGAAAGCCAATAGAAGCATCTCCGCCTCCCTaGCCAGCAGTGCGTACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QHTALKTERKTHCGKPIEASPPP*PAVRTG Trigger: CCCAGTACGCACTGCTGGCCAGGGAGGCGGAGATGC...TTCTATTGGCTTTCCACAATGGGTCTTTCTTTCAGTTTTGAGAGCGGTATGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR CCA 90 bp | TCTTACTGTGAATGCTTTGAGGTACAGCTGCTTCCACACCCCCAATGCAAGACTTCTCGTAGTACTGGTTaGCTAGCCGGCCCTTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SYCECFEVQLLPHPQCKTSRSTG*LAGPSW Trigger: CCATGAAGGGCCGGCTAGCCAACCAGTACTACGAGA...AGTCTTGCATTGGGGGTGTGGAAGCAGCTGTACCTCAAAGCATTCACAGTAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| 3UTR CAA 72 bp | CACACAAGTGAAGATCAGAAGACAACTTGCAGGAGTTaGTTCCCTGCTTCCACGCGTGGGTCCCAAGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: HTSEDQKTTCRS*FPASTRGSQEQ Trigger: CTGTTCTTGGGACCCACGCGTGGAAGCAGGGAACAAACTCCTGCAAGTTGTCTTCTGATCTTCACTTGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS-3UTR TCA 90 bp | ATCATCCAGACAGAAAGATACTTGCTTACATCTCAGGATGAAAAAGGGAAAACCGAAGGAGCTGGCTGGTaGCCCTGTGGAGCCGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: IIQTERYLLTSQDEKGKTEGAGW*PCGAAL Trigger: GAGTGCGGCTCCACAGGGTCACCAGCCAGCTCCTTC...GGTTTTCCCTTTTTCATCCTGAGATGTAAGCAAGTATCTTTCTGTCTGGATGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR TCA 90 bp | GCAAAGATAGAGGCGGTAGATCTAATATCAGTGGTCAAATCAAAGCGGGCCATTGCTTCCAGGCTTCCTTaGAGTGGAAGGAGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AKIEAVDLISVVKSKRAIASRLP*SGRSWL Trigger: CAGCCAGCTCCTTCCACTTCAAGGAAGCCTGGAAGC...AATGGCCCGCTTTGATTTGACCACTGATATTAGATCTACCGCCTCTATCTTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS-3UTR TCA 90 bp | CTCAAAACTGAAAGAAAGACCCATTGTGGAAAGCCAATAGAAAGGTTTCCCAGCTCAGCCATTCCCCGGTaGCAGCGTTGTACCTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LKTERKTHCGKPIERFPSSAIPR*QRCTCA Trigger: GGCACAGGTACAACGCTGTCACCGGGGAATGGCTGA...GCTGGGAAACCTTTCTATTGGCTTTCCACAATGGGTCTTTCTTTCAGTTTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR TCA 90 bp | CTCAGCCTCAAGGAACAGCACCACTGTAGCCTGGTTTCTGTCTCTGAGATGAAAAGAGTTTCTTCGTCCTaGAGCACTCCCTCATTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSLKEQHHCSLVSVSEMKRVSSS*STPSLL Trigger: GAGCAATGAGGGAGTGCTTCAGGACGAAGAAACTCT...TTTCATCTCAGAGACAGAAACCAGGCTACAGTGGTGCTGTTCCTTGAGGCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS-3UTR TCA 90 bp | GGCCAGCTGCAAAGGCTATCAAGAGTGAGAAAACGGAATACAAAAGTGAGTTTAGCAGCTGAGAGTACATaGGGCCTAGGCCCACGATGG | + |
|
Preference number: 4 (lower is better) Translates to: GQLQRLSRVRKRNTKVSLAAEST*GLGPRW Trigger: CCATCGTGGGCCTAGGCCTCATGTACTCTCAGCTGC...TAAACTCACTTTTGTATTCCGTTTTCTCACTCTTGATAGCCTTTGCAGCTGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR GCA 90 bp | CTCAAAACTGAAAGAAAGACCCATTGTGGAAAGCCAATAGAAAGGTTTCCCAGCGAAGCACTCCCTCATTaGTCCACGGCCGAAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKTERKTHCGKPIERFPSEALPH*STAEGL Trigger: CAGCCCTTCGGCCGTGGAGCAATGAGGGAGTGCTTC...GCTGGGAAACCTTTCTATTGGCTTTCCACAATGGGTCTTTCTTTCAGTTTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR GCA 90 bp | CATTGTGGAAAGCCAATAGAAAGGTTTCCCAGCACATGGCCTGGAGACCCTGAGTTCCATTGCTGGGCGTaGAAGAAGTTGGAGAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HCGKPIERFPSTWPGDPEFHCWA*KKLESF Trigger: GAAACTCTCCAACTTCTTGCACGCCCAGCAATGGAA...CTCAGGGTCTCCAGGCCATGTGCTGGGAAACCTTTCTATTGGCTTTCCACAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR GCA 90 bp | AATAGCCCAGGCTGGCTCCAAACTCACAATCCTGCTTCAGCCTCCAAGTGGCAATCTGACAAATCCGGTTaGAGGCATGAGAGTAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: NSPGWLQTHNPASASKWQSDKSG*RHESRR Trigger: TCTTCTACTCTCATGCCTGCAACCGGATTTGTCAGA...TTGCCACTTGGAGGCTGAAGCAGGATTGTGAGTTTGGAGCCAGCCTGGGCTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS-3UTR CCA 90 bp | TACACACACAATTGCAGCCACACTTCAGCCAGTTGCCTTGAGGTCAGAGACAAACGCACCATGGCCAAATaGACCTTCCCCAAAACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: YTHNCSHTSASCLEVRDKRTMAK*TFPKTD Trigger: GTCTGTTTTGGGGAAGGTCCATTTGGCCATGGTGCG...TTTGTCTCTGACCTCAAGGCAACTGGCTGAAGTGTGGCTGCAATTGTGTGTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS-3UTR CCA 90 bp | CATTGTGGAAAGCCAATAGAAAGGTTTCCCAGCACATGGCCTGGAGACCCTGAGGGGCCACTAAAATCATaGAATGCCTGTCACCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HCGKPIERFPSTWPGDPEGPLKS*NACHQL Trigger: AAGCTGGTGACAGGCATTCCATGATTTTAGTGGCCC...CTCAGGGTCTCCAGGCCATGTGCTGGGAAACCTTTCTATTGGCTTTCCACAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR TCA 90 bp | ACCGCTCTCAAAACTGAAAGAAAGACCCATTGTGGAAAGCCAATAGAAAGGTTTTCAGCCATTCCCCGGTaGCAGCGTTGTACCTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TALKTERKTHCGKPIERFSAIPR*QRCTCA Trigger: GGCACAGGTACAACGCTGTCACCGGGGAATGGCTGA...AAACCTTTCTATTGGCTTTCCACAATGGGTCTTTCTTTCAGTTTTGAGAGCGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR TCA 90 bp | ACCGCTCTCAAAACTGAAAGAAAGACCCATTGTGGAAAGCCAATAGAAAGGTTTCCACGGCCGAAGGGCTaGGACGCCATCTTGATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TALKTERKTHCGKPIERFPRPKG*DAILIR Trigger: TCTGATCAAGATGGCGTCTCAGCCCTTCGGCCGTGG...AAACCTTTCTATTGGCTTTCCACAATGGGTCTTTCTTTCAGTTTTGAGAGCGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR TCA 90 bp | ACCGCTCTCAAAACTGAAAGAAAGACCCATTGTGGAAAGCCAATAGAAAGGTTTGCTGTGTGGTGTAGCTaGAGACGGGGAGGAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TALKTERKTHCGKPIERFAVWCS*RRGGRQ Trigger: CTGCCTTCCTCCCCGTCTTCAGCTACACCACACAGC...AAACCTTTCTATTGGCTTTCCACAATGGGTCTTTCTTTCAGTTTTGAGAGCGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR GCA 90 bp | TCCAAGCTCTCTTTTCATTCGCAAGGGTCCTTAAAGAGGCATTTGCTTAGCTGTCCCAGGTCAGCTGCATaGTCCAGATGGAAGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SKLSFHSQGSLKRHLLSCPRSAA*SRWKMA Trigger: AGCCATCTTCCATCTGGAGCATGCAGCTGACCTGGG...ACAGCTAAGCAAATGCCTCTTTAAGGACCCTTGCGAATGAAAAGAGAGCTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS-3UTR CCA 90 bp | CTCAAAACTGAAAGAAAGACCCATTGTGGAAAGCCAATAGAAAGGTTTCCCAGCGCTTGGCCACGTAGTTaGAGGCCCCCTTCCATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LKTERKTHCGKPIERFPSAWPRS*RPPSIA Trigger: AGCAATGGAAGGGGGCCTCCAACTACGTGGCCAAGC...GCTGGGAAACCTTTCTATTGGCTTTCCACAATGGGTCTTTCTTTCAGTTTTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR CCA 90 bp | GCAAAGATAGAGGCGGTAGATCTAATATCAGTGGTCAAATCAAAGCGGGCCATTAAGTGGAAGAGGGGCTaGCCTGGTCTGTCCTTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: AKIEAVDLISVVKSKRAIKWKRG*PGLSFS Trigger: GCTAAAGGACAGACCAGGCCAGCCCCTCTTCCACTT...AATGGCCCGCTTTGATTTGACCACTGATATTAGATCTACCGCCTCTATCTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS-3UTR CCA 90 bp | CGCATATCAGCTCTGTTAATCGAGGCTGTTACCTGCTTTGAGCACTGGAAGACACCCTCAAGATGGTCTTaGCTGATTGCAATAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RISALLIEAVTCFEHWKTPSRWS*LIAIAW Trigger: CCAGGCTATTGCAATCAGCCAAGACCATCTTGAGGG...TGTCTTCCAGTGCTCAAAGCAGGTAACAGCCTCGATTAACAGAGCTGATATGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS-3UTR CCA 90 bp | TGGGTGCTGGGAATTGAACCTGGGTCATCTGGAAGAGCAGCCAATGATCTTAACCTGTCCCCCTCAAGATaGTCTTGGCTGATTGCAATA | + |
|
Preference number: 4 (lower is better) Translates to: WVLGIEPGSSGRAANDLNLSPSR*SWLIAI Trigger: TATTGCAATCAGCCAAGACCATCTTGAGGGGGACAG...GTTAAGATCATTGGCTGCTCTTCCAGATGACCCAGGTTCAATTCCCAGCACCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS-3UTR CCA 90 bp | CAACATACCGCTCTCAAAACTGAAAGAAAGACCCATTGTGGAAAGCCAATAGAAAAGCGCCCGCCCTCGTaGTATCGCACCATGGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: QHTALKTERKTHCGKPIEKRPPS*YRTMAK Trigger: TTTGGCCATGGTGCGATACCACGAGGGCGGGCGCTT...TTCTATTGGCTTTCCACAATGGGTCTTTCTTTCAGTTTTGAGAGCGGTATGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR CCA 90 bp | CATTGTGGAAAGCCAATAGAAAGGTTTCCCAGCACATGGCCTGGAGACCCTGAGAAATCTCCTGATCTTTaGGGGTTCTTGTCCAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HCGKPIERFPSTWPGDPEKSPDL*GFLSSP Trigger: TGGACTGGACAAGAACCCCCAAAGATCAGGAGATTT...CTCAGGGTCTCCAGGCCATGTGCTGGGAAACCTTTCTATTGGCTTTCCACAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR CCA 90 bp | CTCAAAACTGAAAGAAAGACCCATTGTGGAAAGCCAATAGAAAGGTTTCCCAGCCTAGCCGGCCCTTCATaGCTTCCATTGCTGCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LKTERKTHCGKPIERFPSLAGPS*LPLLPQ Trigger: CTGAGGCAGCAATGGAAGCCATGAAGGGCCGGCTAG...GCTGGGAAACCTTTCTATTGGCTTTCCACAATGGGTCTTTCTTTCAGTTTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| 3UTR CAA 72 bp | CTCTCTTTTCATTCGCAAGGGTCCTTAAAGAGGCATTaGCTTAGCTGTGCACCAGGCTATCCCAGTCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSFHSQGSLKRH*LSCAPGYPSLL Trigger: CAAGAGACTGGGATAGCCTGGTGCACAGCTAAGCAAATGCCTCTTTAAGGACCCTTGCGAATGAAAAGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS-3UTR TCA 90 bp | ATCATCCAGACAGAAAGATACTTGCTTACATCTCAGGATGAAAAAGGGAAAACCCCACGGCCGAAGGGCTaGGACGCCATCTTGATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IIQTERYLLTSQDEKGKTPRPKG*DAILIR Trigger: TCTGATCAAGATGGCGTCTCAGCCCTTCGGCCGTGG...GGTTTTCCCTTTTTCATCCTGAGATGTAAGCAAGTATCTTTCTGTCTGGATGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR CCA 90 bp | GCAAGACTCAGAGGTAGTAAATACGCATGTATAAAGGCCAAACCTGTTTTTGAAGCTCGATGTAGCGCTTaGCCACGTAGTTGGAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ARLRGSKYACIKAKPVFEARCSA*PRSWRP Trigger: GGGCCTCCAACTACGTGGCCAAGCGCTACATCGAGC...TTCAAAAACAGGTTTGGCCTTTATACATGCGTATTTACTACCTCTGAGTCTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS-3UTR CCA 90 bp | TACACACACAATTGCAGCCACACTTCAGCCAGTTGCCTTGAGGTCAGAGACAAAGGGCCACTAAAATCATaGAATGCCTGTCACCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: YTHNCSHTSASCLEVRDKGPLKS*NACHQL Trigger: AAGCTGGTGACAGGCATTCCATGATTTTAGTGGCCC...TTTGTCTCTGACCTCAAGGCAACTGGCTGAAGTGTGGCTGCAATTGTGTGTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS-3UTR CCA 90 bp | TCCAAGCTCTCTTTTCATTCGCAAGGGTCCTTAAAGAGGCATTTGCTTAGCTGTGCTGCCTCAGCTGCCTaGGTGTACAAATCTCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SKLSFHSQGSLKRHLLSCAASAA*VYKSPD Trigger: ATCAGGAGATTTGTACACCCAGGCAGCTGAGGCAGC...ACAGCTAAGCAAATGCCTCTTTAAGGACCCTTGCGAATGAAAAGAGAGCTTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS-3UTR TCA 90 bp | CTCAGCCTCAAGGAACAGCACCACTGTAGCCTGGTTTCTGTCTCTGAGATGAAAATCACGGACAAAGCCTaGGTTGGAATTGTACTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LSLKEQHHCSLVSVSEMKITDKA*VGIVLD Trigger: ATCAAGTACAATTCCAACTCAGGCTTTGTCCGTGAT...TTTCATCTCAGAGACAGAAACCAGGCTACAGTGGTGCTGTTCCTTGAGGCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS-3UTR GCA 90 bp | CTCAAAACTGAAAGAAAGACCCATTGTGGAAAGCCAATAGAAAGGTTTCCCAGCGCCTCCATCTGGAGCTaGACATCCTCAAAGTACACG | + |
|
Preference number: 4 (lower is better) Translates to: LKTERKTHCGKPIERFPSASIWS*TSSKYT Trigger: CGTGTACTTTGAGGATGTGCAGCTCCAGATGGAGGC...GCTGGGAAACCTTTCTATTGGCTTTCCACAATGGGTCTTTCTTTCAGTTTTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR GCA 90 bp | ACCGCTCTCAAAACTGAAAGAAAGACCCATTGTGGAAAGCCAATAGAAAGGTTTCCCAGGTCAGCTGCATaGTCCAGATGGAAGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TALKTERKTHCGKPIERFPRSAA*SRWKMA Trigger: AGCCATCTTCCATCTGGAGCATGCAGCTGACCTGGG...AAACCTTTCTATTGGCTTTCCACAATGGGTCTTTCTTTCAGTTTTGAGAGCGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR GCA 90 bp | ACCGCTCTCAAAACTGAAAGAAAGACCCATTGTGGAAAGCCAATAGAAAGGTTTCTTCATGGCTTCCATTaGTGCCTCAGCTGCCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TALKTERKTHCGKPIERFLHGFH*CLSCLG Trigger: ACCCAGGCAGCTGAGGCAGCAATGGAAGCCATGAAG...AAACCTTTCTATTGGCTTTCCACAATGGGTCTTTCTTTCAGTTTTGAGAGCGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
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| CDS-3UTR CCA 90 bp | CAACATACCGCTCTCAAAACTGAAAGAAAGACCCATTGTGGAAAGCCAATAGAACAGGCTTCCTTGAAGTaGAAGGAGCTGGCTGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QHTALKTERKTHCGKPIEQASLK*KELAGD Trigger: GTCACCAGCCAGCTCCTTCCACTTCAAGGAAGCCTG...TTCTATTGGCTTTCCACAATGGGTCTTTCTTTCAGTTTTGAGAGCGGTATGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR CCA 90 bp | CTCAAAACTGAAAGAAAGACCCATTGTGGAAAGCCAATAGAAAGGTTTCCCAGCGGTCAGGCATGTGCTTaGCTTTCTCGATCGCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: LKTERKTHCGKPIERFPSGQACA*LSRSHA Trigger: AGCATGCGATCGAGAAAGCCAAGCACATGCCTGACC...GCTGGGAAACCTTTCTATTGGCTTTCCACAATGGGTCTTTCTTTCAGTTTTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR CCA 90 bp | GCAAGACTCAGAGGTAGTAAATACGCATGTATAAAGGCCAAACCTGTTTTTGAAGCTTGGCCACGTAGTTaGAGGCCCCCTTCCATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ARLRGSKYACIKAKPVFEAWPRS*RPPSIA Trigger: AGCAATGGAAGGGGGCCTCCAACTACGTGGCCAAGC...TTCAAAAACAGGTTTGGCCTTTATACATGCGTATTTACTACCTCTGAGTCTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS-3UTR CCA 90 bp | ACCGCTCTCAAAACTGAAAGAAAGACCCATTGTGGAAAGCCAATAGAAAGGTTTAAGTGGAAGAGGGGCTaGCCTGGTCTGTCCTTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: TALKTERKTHCGKPIERFKWKRG*PGLSFS Trigger: GCTAAAGGACAGACCAGGCCAGCCCCTCTTCCACTT...AAACCTTTCTATTGGCTTTCCACAATGGGTCTTTCTTTCAGTTTTGAGAGCGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR CCA 90 bp | GCAAAGATAGAGGCGGTAGATCTAATATCAGTGGTCAAATCAAAGCGGGCCATTCGCTCAAATGTGAAATaGCTGAAGGCCTGTGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: AKIEAVDLISVVKSKRAIRSNVK*LKACGV Trigger: AACCCCACAGGCCTTCAGCCATTTCACATTTGAGCG...AATGGCCCGCTTTGATTTGACCACTGATATTAGATCTACCGCCTCTATCTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS-3UTR CCA 90 bp | CTCAAAACTGAAAGAAAGACCCATTGTGGAAAGCCAATAGAAAGGTTTCCCAGCACTTCGCTTCTCGCTTaGATACCCACTGTCCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LKTERKTHCGKPIERFPSTSLLA*IPTVPT Trigger: AGTGGGGACAGTGGGTATCCAAGCGAGAAGCGAAGT...GCTGGGAAACCTTTCTATTGGCTTTCCACAATGGGTCTTTCTTTCAGTTTTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| 3UTR CAA 72 bp | TACAACTATCTCCCCCAGCATGAAGGAGCCTGGGTATaGAACCATCTCACATCCACTGGAGGAAACAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: YNYLPQHEGAWV*NHLTSTGGNKQ Trigger: TTGTTTGTTTCCTCCAGTGGATGTGAGATGGTTCAATACCCAGGCTCCTTCATGCTGGGGGAGATAGTTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR TCA 90 bp | CTCAAAACTGAAAGAAAGACCCATTGTGGAAAGCCAATAGAAAGGTTTCCCAGCAGAGTTTCTTCGTCCTaGAGCACTCCCTCATTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LKTERKTHCGKPIERFPSRVSSS*STPSLL Trigger: GAGCAATGAGGGAGTGCTTCAGGACGAAGAAACTCT...GCTGGGAAACCTTTCTATTGGCTTTCCACAATGGGTCTTTCTTTCAGTTTTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR GCA 90 bp | CGCATATCAGCTCTGTTAATCGAGGCTGTTACCTGCTTTGAGCACTGGAAGACATCAATGATGCACATCTaGATGATATCCACCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RISALLIEAVTCFEHWKTSMMHI*MISTCL Trigger: CAAGCAGGTGGATATCATGCAGATGTGCATCATTGA...TGTCTTCCAGTGCTCAAAGCAGGTAACAGCCTCGATTAACAGAGCTGATATGCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| CDS-3UTR GCA 90 bp | TCCAAGCTCTCTTTTCATTCGCAAGGGTCCTTAAAGAGGCATTTGCTTAGCTGTATTGCAATAGCCTGGTaGTCTGATTCACCGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SKLSFHSQGSLKRHLLSCIAIAW*SDSPHP Trigger: AGGATGCGGTGAATCAGAGCACCAGGCTATTGCAAT...ACAGCTAAGCAAATGCCTCTTTAAGGACCCTTGCGAATGAAAAGAGAGCTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| CDS-3UTR CCA 90 bp | ACCGCTCTCAAAACTGAAAGAAAGACCCATTGTGGAAAGCCAATAGAAAGGTTTGGTCAGGCATGTGCTTaGCTTTCTCGATCGCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: TALKTERKTHCGKPIERFGQACA*LSRSHA Trigger: AGCATGCGATCGAGAAAGCCAAGCACATGCCTGACC...AAACCTTTCTATTGGCTTTCCACAATGGGTCTTTCTTTCAGTTTTGAGAGCGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR CCA 90 bp | CAACATACCGCTCTCAAAACTGAAAGAAAGACCCATTGTGGAAAGCCAATAGAACGCACCATGGCCAAATaGACCTTCCCCAAAACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QHTALKTERKTHCGKPIERTMAK*TFPKTD Trigger: GTCTGTTTTGGGGAAGGTCCATTTGGCCATGGTGCG...TTCTATTGGCTTTCCACAATGGGTCTTTCTTTCAGTTTTGAGAGCGGTATGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
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| CDS-3UTR TCA 90 bp | GCTCTGTTAATCGAGGCTGTTACCTGCTTTGAGCACTGGAAGACAGAACTGATCAGTTGGAATTGTACTTaGTGTACTTGCCCTCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: ALLIEAVTCFEHWKTELISWNCT*CTCPQC Trigger: ACATTGAGGGCAAGTACATCAAGTACAATTCCAACT...GATCAGTTCTGTCTTCCAGTGCTCAAAGCAGGTAACAGCCTCGATTAACAGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS-3UTR TCA 90 bp | CACACACACACCACAACTTATATGACAGTTACTCTGAGAGATTATGTCACAATAGTAAGGCCCATGCTCTaGCAAATCCGGTTGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HTHTTTYMTVTLRDYVTIVRPML*QIRLQA Trigger: TGCCTGCAACCGGATTTGTCAGAGCATGGGCCTTAC...TATTGTGACATAATCTCTCAGAGTAACTGTCATATAAGTTGTGGTGTGTGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS-3UTR GCA 90 bp | ATCATCCAGACAGAAAGATACTTGCTTACATCTCAGGATGAAAAAGGGAAAACCGCCTCCATCTGGAGCTaGACATCCTCAAAGTACACG | + |
|
Preference number: 4 (lower is better) Translates to: IIQTERYLLTSQDEKGKTASIWS*TSSKYT Trigger: CGTGTACTTTGAGGATGTGCAGCTCCAGATGGAGGC...GGTTTTCCCTTTTTCATCCTGAGATGTAAGCAAGTATCTTTCTGTCTGGATGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR CCA 90 bp | ACCGCTCTCAAAACTGAAAGAAAGACCCATTGTGGAAAGCCAATAGAAAGGTTTCGCTCAAATGTGAAATaGCTGAAGGCCTGTGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TALKTERKTHCGKPIERFRSNVK*LKACGV Trigger: AACCCCACAGGCCTTCAGCCATTTCACATTTGAGCG...AAACCTTTCTATTGGCTTTCCACAATGGGTCTTTCTTTCAGTTTTGAGAGCGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
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| CDS-3UTR CCA 90 bp | GGCCAGCTGCAAAGGCTATCAAGAGTGAGAAAACGGAATACAAAAGTGAGTTTACTGTCCCCCTCAAGATaGTCTTGGCTGATTGCAATA | + |
|
Preference number: 4 (lower is better) Translates to: GQLQRLSRVRKRNTKVSLLSPSR*SWLIAI Trigger: TATTGCAATCAGCCAAGACCATCTTGAGGGGGACAG...TAAACTCACTTTTGTATTCCGTTTTCTCACTCTTGATAGCCTTTGCAGCTGGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR TCA 90 bp | GGCCAGCTGCAAAGGCTATCAAGAGTGAGAAAACGGAATACAAAAGTGAGTTTATTGGAGCTGACATTCTaGTTGGACATGTGGTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: GQLQRLSRVRKRNTKVSLLELTF*LDMWSS Trigger: TGATGACCACATGTCCAATCAGAATGTCAGCTCCAA...TAAACTCACTTTTGTATTCCGTTTTCTCACTCTTGATAGCCTTTGCAGCTGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
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| CDS-3UTR GCA 90 bp | CTCAAAACTGAAAGAAAGACCCATTGTGGAAAGCCAATAGAAAGGTTTCCCAGCCATCTCCAAAGTCAGTaGCTTTCTCAGTGTGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: LKTERKTHCGKPIERFPSHLQSQ*LSQCGS Trigger: AGATCCACACTGAGAAAGGCACTGACTTTGGAGATG...GCTGGGAAACCTTTCTATTGGCTTTCCACAATGGGTCTTTCTTTCAGTTTTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
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| CDS-3UTR GCA 90 bp | GCAAGACTCAGAGGTAGTAAATACGCATGTATAAAGGCCAAACCTGTTTTTGAATTCTCCCAGGTCAGCTaGATGCTCCAGATGGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ARLRGSKYACIKAKPVFEFSQVS*MLQMED Trigger: ATCTTCCATCTGGAGCATGCAGCTGACCTGGGAGAA...TTCAAAAACAGGTTTGGCCTTTATACATGCGTATTTACTACCTCTGAGTCTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| CDS-3UTR CCA 90 bp | ATCATCCAGACAGAAAGATACTTGCTTACATCTCAGGATGAAAAAGGGAAAACCAGGTGGTCCAGTTTCTaGCTGTGTGGTGTAGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: IIQTERYLLTSQDEKGKTRWSSF*LCGVAE Trigger: TTCAGCTACACCACACAGCCAGAAACTGGACCACCT...GGTTTTCCCTTTTTCATCCTGAGATGTAAGCAAGTATCTTTCTGTCTGGATGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
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| CDS-3UTR CCA 90 bp | ATCATCCAGACAGAAAGATACTTGCTTACATCTCAGGATGAAAAAGGGAAAACCTTGTCCATGCGGTCATaGTCTCTAGGGCCCATGTTA | + |
|
Preference number: 4 (lower is better) Translates to: IIQTERYLLTSQDEKGKTLSMRS*SLGPML Trigger: TAACATGGGCCCTAGAGACCATGACCGCATGGACAA...GGTTTTCCCTTTTTCATCCTGAGATGTAAGCAAGTATCTTTCTGTCTGGATGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
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| 3UTR CAA 72 bp | TTTATTTTTATGTCCATCGGCGTTTGGCCTGCATGGTaGTGGGAGAGCATCGGATCCTTAAAACTGGAATTA | + |
|
Preference number: 4 (lower is better) Translates to: FIFMSIGVWPAW*WESIGSLKLEL Trigger: TAATTCCAGTTTTAAGGATCCGATGCTCTCCCACAACCATGCAGGCCAAACGCCGATGGACATAAAAATAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
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| CDS-3UTR GCA 90 bp | ACCGCTCTCAAAACTGAAAGAAAGACCCATTGTGGAAAGCCAATAGAAAGGTTTTCTGACAAATCCGGTTaGAGGCATGAGAGTAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TALKTERKTHCGKPIERFSDKSG*RHESRR Trigger: TCTTCTACTCTCATGCCTGCAACCGGATTTGTCAGA...AAACCTTTCTATTGGCTTTCCACAATGGGTCTTTCTTTCAGTTTTGAGAGCGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
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| CDS-3UTR GCA 90 bp | ATCATCCAGACAGAAAGATACTTGCTTACATCTCAGGATGAAAAAGGGAAAACCATTGCAATAGCCTGGTaGTCTGATTCACCGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: IIQTERYLLTSQDEKGKTIAIAW*SDSPHP Trigger: AGGATGCGGTGAATCAGAGCACCAGGCTATTGCAAT...GGTTTTCCCTTTTTCATCCTGAGATGTAAGCAAGTATCTTTCTGTCTGGATGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
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| CDS-3UTR GCA 90 bp | ATCATCCAGACAGAAAGATACTTGCTTACATCTCAGGATGAAAAAGGGAAAACCCATCTCCAAAGTCAGTaGCTTTCTCAGTGTGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: IIQTERYLLTSQDEKGKTHLQSQ*LSQCGS Trigger: AGATCCACACTGAGAAAGGCACTGACTTTGGAGATG...GGTTTTCCCTTTTTCATCCTGAGATGTAAGCAAGTATCTTTCTGTCTGGATGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR CCA 90 bp | ATCATCCAGACAGAAAGATACTTGCTTACATCTCAGGATGAAAAAGGGAAAACCAAATCTCCTGATCTTTaGGGGTTCTTGTCCAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IIQTERYLLTSQDEKGKTKSPDL*GFLSSP Trigger: TGGACTGGACAAGAACCCCCAAAGATCAGGAGATTT...GGTTTTCCCTTTTTCATCCTGAGATGTAAGCAAGTATCTTTCTGTCTGGATGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR TCA 90 bp | CAACATACCGCTCTCAAAACTGAAAGAAAGACCCATTGTGGAAAGCCAATAGAAAGTTGGAATTGTACTTaGTGTACTTGCCCTCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: QHTALKTERKTHCGKPIESWNCT*CTCPQC Trigger: ACATTGAGGGCAAGTACATCAAGTACAATTCCAACT...TTCTATTGGCTTTCCACAATGGGTCTTTCTTTCAGTTTTGAGAGCGGTATGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR TCA 90 bp | ATCATCCAGACAGAAAGATACTTGCTTACATCTCAGGATGAAAAAGGGAAAACCATCACGGACAAAGCCTaGGTTGGAATTGTACTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: IIQTERYLLTSQDEKGKTITDKA*VGIVLD Trigger: ATCAAGTACAATTCCAACTCAGGCTTTGTCCGTGAT...GGTTTTCCCTTTTTCATCCTGAGATGTAAGCAAGTATCTTTCTGTCTGGATGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS CCA 90 bp | CCCCCGGTGAGCAGCATCTCCGCCTCCCTGGCCAGCAGTGCGTACTaGGGCTCGTCCTGTATCCCATCGTACTCCCCGCCTTCATCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PPVSSISASLASSAY*GSSCIPSYSPPSSQ Trigger: CTGCGATGAAGGCGGGGAGTACGATGGGATACAGGACGAGCCCCAGTACGCACTGCTGGCCAGGGAGGCGGAGATGCTGCTCACCGGGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000047875.16 ENSMUST00000106487.9 ENSMUST00000106488.3 ENSMUST00000106489.9 ENSMUST00000146482.3 |
||
| CDS GCA 90 bp | TTTAGCCTCTGCACTTCTAGGGCCACGGCCGAGGGCCTCGGCAGGTaGAGGCGGGAGGGATTGAGCAGGTTCCACGTCTCCACACAGACC | + |
|
Preference number: 5 (lower is better) Translates to: FSLCTSRATAEGLGR*RREGLSRFHVSTQT Trigger: GGTCTGTGTGGAGACGTGGAACCTGCTCAATCCCTCCCGCCTGCACCTGCCGAGGCCCTCGGCCGTGGCCCTAGAAGTGCAGAGGCTAAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 |
||
| CDS GCA 90 bp | ACAGACTTCCCGATTTTCCTTCCAAGGTCCAGGGCATTTAGCCTCTaGACTTCTAGGGCCACGGCCGAGGGCCTCGGCAGGTGCAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: TDFPIFLPRSRAFSL*TSRATAEGLGRCRR Trigger: CCGCCTGCACCTGCCGAGGCCCTCGGCCGTGGCCCTAGAAGTGCAGAGGCTAAATGCCCTGGACCTTGGAAGGAAAATCGGGAAGTCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 |
||
| CDS CCA 90 bp | CCTCCATCTGGGCCCAGGCCTCTTCCGCCTTCTCGTAGTACTGGTTaGCTAGCCGGCCCTTCATGGCTTCCATTGCTGCCTCAGCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PPSGPRPLPPSRSTG*LAGPSWLPLLPQLP Trigger: AGGCAGCTGAGGCAGCAATGGAAGCCATGAAGGGCCGGCTAGCCAACCAGTACTACGAGAAGGCGGAAGAGGCCTGGGCCCAGATGGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 ENSMUST00000146482.3 |
||
| CDS-3UTR CAA 90 bp | GGCCTGGAGACCCTGAGATGTGAGTCCTGCCTGCAAAGGCTGGCGAGAGAAGCCTCCCCGGTGACAGCGTaGTACCTGTGCCGAGTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GLETLRCESCLQRLAREASPVTA*YLCRVA Trigger: TGCTACTCGGCACAGGTACAACGCTGTCACCGGGGA...GGCTTCTCTCGCCAGCCTTTGCAGGCAGGACTCACATCTCAGGGTCTCCAGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS GCA 90 bp | ACACAGACCCGTCCAGAGCTGCCCAGGCTATCCTCGTCAGATTCATaGCTTCGGTTGCCGTTGGAGTGGCCGTGTTCTCGGGGCTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TQTRPELPRLSSSDS*LRLPLEWPCSRGSG Trigger: TCCTGAGCCCCGAGAACACGGCCACTCCAACGGCAACCGAAGGCATGAATCTGACGAGGATAGCCTGGGCAGCTCTGGACGGGTCTGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 |
||
| CDS GCA 90 bp | TCTGTCTCCCGTCCAGAGCTGCCCAGGCTATCCTCGTCAGATTCATaGCTTCGGTTGCCGTTGGAGTGGCCGTGTTCTCGGGGCTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SVSRPELPRLSSSDS*LRLPLEWPCSRGSG Trigger: TCCTGAGCCCCGAGAACACGGCCACTCCAACGGCAACCGAAGGCATGAATCTGACGAGGATAGCCTGGGCAGCTCTGGACGGGAGACAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146482.3 |
||
| CDS CCA 90 bp | ACACGCTCCTGTCCACCGGCTCGATGTAGCGCTTGGCCACGTAGTTaGAGGCCCCCTTCCATTGCTGGGCGTGCAAGAAGTTGGAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TRSCPPARCSAWPRS*RPPSIAGRARSWRV Trigger: AACTCTCCAACTTCTTGCACGCCCAGCAATGGAAGGGGGCCTCCAACTACGTGGCCAAGCGCTACATCGAGCCGGTGGACAGGAGCGTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 |
||
| CDS CCA 90 bp | CATCCTCAAAGTACACGCTCCTGTCCACCGGCTCGATGTAGCGCTTaGCCACGTAGTTGGAGGCCCCCTTCCATTGCTGGGCGTGCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: HPQSTRSCPPARCSA*PRSWRPPSIAGRAR Trigger: TCTTGCACGCCCAGCAATGGAAGGGGGCCTCCAACTACGTGGCCAAGCGCTACATCGAGCCGGTGGACAGGAGCGTGTACTTTGAGGATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 |
||
| CDS TCA 90 bp | TCTGTCTCCTTCAGAGAGACATCAGCCAGGATGTGGTGGGGCAGCTaGGAGTACATGAGGCCTAGGCCCACGATGGCCTCCAGTTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SVSFRETSARMWWGS*EYMRPRPTMASSSP Trigger: GGGAGAACTGGAGGCCATCGTGGGCCTAGGCCTCATGTACTCTCAGCTGCCCCACCACATCCTGGCTGATGTCTCTCTGAAGGAGACAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 |
||
| CDS CCA 90 bp | CCCAGGCTATCCTCGTCAGATTCATGCCTTCGGTTGCCGTTGGAGTaGCCGTGTTCTCGGGGCTCAGGATCATCCAGGTCACTTCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PRLSSSDSCLRLPLE*PCSRGSGSSRSLRF Trigger: GAAGCGAAGTGACCTGGATGATCCTGAGCCCCGAGAACACGGCCACTCCAACGGCAACCGAAGGCATGAATCTGACGAGGATAGCCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 ENSMUST00000146482.3 |
||
| CDS-3UTR CAA 90 bp | AAAGAGACCACTTCTCCACATGAAGGCCACGTGGTTGGGGGAACTGCAGGCCTGGGAGGCCCCCTTCCATaGCTGGGCGTGCAAGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: KETTSPHEGHVVGGTAGLGGPLP*LGVQEV Trigger: AACTTCTTGCACGCCCAGCAATGGAAGGGGGCCTCC...CAGGCCTGCAGTTCCCCCAACCACGTGGCCTTCATGTGGAGAAGTGGTCTCTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS-3UTR CAA 90 bp | GGCCTGGAGACCCTGAGATGTGAGTCCTGCCTGCAAAGGCTGGCGAGAGAAGCCCCCCTCAAGATGGTCTaGGCTGATTGCAATAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GLETLRCESCLQRLAREAPLKMV*ADCNSL Trigger: CAGGCTATTGCAATCAGCCAAGACCATCTTGAGGGG...GGCTTCTCTCGCCAGCCTTTGCAGGCAGGACTCACATCTCAGGGTCTCCAGGCC 59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS CCA 90 bp | TCTCGATCCCACTCCTCATCCTTCTCGCAGAAGCGCCCGCCCTCGTaGTATCGCACCATGGCCAAATGGACCTTCCCCAAAACAGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: SRSHSSSFSQKRPPS*YRTMAKWTFPKTDF Trigger: GAAGTCTGTTTTGGGGAAGGTCCATTTGGCCATGGTGCGATACCACGAGGGCGGGCGCTTCTGCGAGAAGGATGAGGAGTGGGATCGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 |
||
| CDS CCA 90 bp | CCTCTTCCGCCTTCTCGTAGTACTGGTTGGCTAGCCGGCCCTTCATaGCTTCCATTGCTGCCTCAGCTGCCTGGGTGTACAAATCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PLPPSRSTGWLAGPS*LPLLPQLPGCTNLL Trigger: CAGGAGATTTGTACACCCAGGCAGCTGAGGCAGCAATGGAAGCCATGAAGGGCCGGCTAGCCAACCAGTACTACGAGAAGGCGGAAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 ENSMUST00000146482.3 |
||
| CDS TCA 90 bp | AGAGTCAAAGGTCACGTCACTCATGTTCTCATCCCCGGAGTTCTCTaGCAGGCGAAGGAGCAAAGGGGGCCGGCTGCTAGAGAGTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RVKGHVTHVLIPGVL*QAKEQRGPAARECP Trigger: AGGACACTCTCTAGCAGCCGGCCCCCTTTGCTCCTTCGCCTGTCAGAGAACTCCGGGGATGAGAACATGAGTGACGTGACCTTTGACTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 |
||
| CDS TCA 90 bp | CACTGGCCAATGGAGGTGGTCCAGTTTCTGGCTGTGTGGTGTAGCTaGAGACGGGGAGGAAGGCAGAGAGTCAAAGGTCACGTCACTCAT | + |
|
Preference number: 5 (lower is better) Translates to: HWPMEVVQFLAVWCS*RRGGRQRVKGHVTH Trigger: ATGAGTGACGTGACCTTTGACTCTCTGCCTTCCTCCCCGTCTTCAGCTACACCACACAGCCAGAAACTGGACCACCTCCATTGGCCAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 |
||
| CDS CCA 90 bp | GTGTTCTCGGGGCTCAGGATCATCCAGGTCACTTCGCTTCTCGCTTaGATACCCACTGTCCCCACTATTCTCAGAGTCCCGGTGATTGTC | + |
|
Preference number: 5 (lower is better) Translates to: VFSGLRIIQVTSLLA*IPTVPTILRVPVIV Trigger: GACAATCACCGGGACTCTGAGAATAGTGGGGACAGTGGGTATCCAAGCGAGAAGCGAAGTGACCTGGATGATCCTGAGCCCCGAGAACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 |
||
| CDS CCA 90 bp | TCCATTGCTGCCTCAGCTGCCTGGGTGTACAAATCTCCTGATCTTTaGGGGTTCTTGTCCAGTCCAAATCCCCCGGTGAGCAGCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SIAASAAWVYKSPDL*GFLSSPNPPVSSIS Trigger: GGAGATGCTGCTCACCGGGGGATTTGGACTGGACAAGAACCCCCAAAGATCAGGAGATTTGTACACCCAGGCAGCTGAGGCAGCAATGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 ENSMUST00000146482.3 |
||
| CDS CCA 90 bp | TTGGCTAGCCGGCCCTTCATGGCTTCCATTGCTGCCTCAGCTGCCTaGGTGTACAAATCTCCTGATCTTTGGGGGTTCTTGTCCAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LASRPFMASIAASAA*VYKSPDLWGFLSSP Trigger: TGGACTGGACAAGAACCCCCAAAGATCAGGAGATTTGTACACCCAGGCAGCTGAGGCAGCAATGGAAGCCATGAAGGGCCGGCTAGCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 ENSMUST00000146482.3 |
||
| CDS-3UTR CAA 90 bp | CACAATCCTGCTTCAGCCTCCAAGTGGCAATATTACCCAGCAGGCTCTCCAAGCGTCTCCAGGGCTGTGTaGTACCAGTGCAAGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: HNPASASKWQYYPAGSPSVSRAV*YQCKAS Trigger: GGAAGCCTTGCACTGGTACAACACAGCCCTGGAGAC...GCTTGGAGAGCCTGCTGGGTAATATTGCCACTTGGAGGCTGAAGCAGGATTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS CCA 90 bp | ATGTGCTTGGCTTTCTCGATCGCATGCTTCCAGGCTTCCTTGAAGTaGAAGGAGCTGGCTGGTGACCCTGTGGAGCCGCACTCTGTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: MCLAFSIACFQASLK*KELAGDPVEPHSVF Trigger: AAAAACAGAGTGCGGCTCCACAGGGTCACCAGCCAGCTCCTTCCACTTCAAGGAAGCCTGGAAGCATGCGATCGAGAAAGCCAAGCACAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 ENSMUST00000143322.9 |
||
| CDS CCA 90 bp | TTGTACCTGTGCCGAGTAGCATGTTCTGTGGCGATGTCCTCGAGATaGAATTCAGCCCAGGGGTCAGGCATGTGCTTGGCTTTCTCGATC | + |
|
Preference number: 5 (lower is better) Translates to: LYLCRVACSVAMSSR*NSAQGSGMCLAFSI Trigger: GATCGAGAAAGCCAAGCACATGCCTGACCCCTGGGCTGAATTCCATCTCGAGGACATCGCCACAGAACATGCTACTCGGCACAGGTACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 ENSMUST00000143322.9 |
||
| CDS-3UTR CAA 90 bp | CTCAGCCTCAAGGAACAGCACCACTGTAGCCTGGTTTCTGTCTCTGAGATGAAACCTTCATGGCTTCCATaGCTGCCTCAGCTGCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LSLKEQHHCSLVSVSEMKPSWLP*LPQLPG Trigger: CCCAGGCAGCTGAGGCAGCAATGGAAGCCATGAAGG...TTTCATCTCAGAGACAGAAACCAGGCTACAGTGGTGCTGTTCCTTGAGGCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS GCA 90 bp | AGAACCTCGTCTTTCAGCCATTCCCCGGTGACAGCGTTGTACCTGTaGCGAGTAGCATGTTCTGTGGCGATGTCCTCGAGATGGAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: RTSSFSHSPVTALYL*RVACSVAMSSRWNS Trigger: TGAATTCCATCTCGAGGACATCGCCACAGAACATGCTACTCGGCACAGGTACAACGCTGTCACCGGGGAATGGCTGAAAGACGAGGTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 ENSMUST00000143322.9 |
||
| CDS GCA 90 bp | AATCAAAGCCTTTTGTCTTGTTCTCCTCTGTCTCCCGTCCAGAGCTaGCCAGGCTATCCTCGTCAGATTCATGCCTTCGGTTGCCGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: NQSLLSCSPLSPVQS*PGYPRQIHAFGCRW Trigger: CCAACGGCAACCGAAGGCATGAATCTGACGAGGATAGCCTGGGCAGCTCTGGACGGGAGACAGAGGAGAACAAGACAAAAGGCTTTGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146482.3 |
||
| CDS-3UTR CAA 90 bp | CATTGTGGAAAGCCAATAGAAAGGTTTCCCAGCACATGGCCTGGAGACCCTGAGTGCTTCCAGGCTTCCTaGAAGTGGAAGGAGCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HCGKPIERFPSTWPGDPECFQAS*KWKELA Trigger: AGCCAGCTCCTTCCACTTCAAGGAAGCCTGGAAGCA...CTCAGGGTCTCCAGGCCATGTGCTGGGAAACCTTTCTATTGGCTTTCCACAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR CAA 90 bp | AATAGCCCAGGCTGGCTCCAAACTCACAATCCTGCTTCAGCCTCCAAGTGGCAACCCCTCAAGATGGTCTaGGCTGATTGCAATAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: NSPGWLQTHNPASASKWQPLKMV*ADCNSL Trigger: CAGGCTATTGCAATCAGCCAAGACCATCTTGAGGGG...TTGCCACTTGGAGGCTGAAGCAGGATTGTGAGTTTGGAGCCAGCCTGGGCTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS GCA 90 bp | AGAGAGCCATTCCCCGGACACCAAGGTTACCATCTCCAAAGTCAGTaGCTTTCTCAGTGTGGATCTGTGGGTCGGTATAAAGGTCACCCA | + |
|
Preference number: 5 (lower is better) Translates to: REPFPGHQGYHLQSQ*LSQCGSVGRYKGHP Trigger: TGGGTGACCTTTATACCGACCCACAGATCCACACTGAGAAAGGCACTGACTTTGGAGATGGTAACCTTGGTGTCCGGGGAATGGCTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 |
||
| CDS-3UTR CAA 90 bp | AAAGAGACCACTTCTCCACATGAAGGCCACGTGGTTGGGGGAACTGCAGGCCTGCGGACAAAGCCTGAGTaGGAATTGTACTTGATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: KETTSPHEGHVVGGTAGLRTKPE*ELYLMY Trigger: GTACATCAAGTACAATTCCAACTCAGGCTTTGTCCG...CAGGCCTGCAGTTCCCCCAACCACGTGGCCTTCATGTGGAGAAGTGGTCTCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS-3UTR CAA 90 bp | CGCATATCAGCTCTGTTAATCGAGGCTGTTACCTGCTTTGAGCACTGGAAGACATGCTTCCAGGCTTCCTaGAAGTGGAAGGAGCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RISALLIEAVTCFEHWKTCFQAS*KWKELA Trigger: AGCCAGCTCCTTCCACTTCAAGGAAGCCTGGAAGCA...TGTCTTCCAGTGCTCAAAGCAGGTAACAGCCTCGATTAACAGAGCTGATATGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS-3UTR CAA 90 bp | GGCCAGCTGCAAAGGCTATCAAGAGTGAGAAAACGGAATACAAAAGTGAGTTTATGCAGGCGGGAGGGATaGAGCAGGTTCCACGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GQLQRLSRVRKRNTKVSLCRREG*SRFHVS Trigger: GGAGACGTGGAACCTGCTCAATCCCTCCCGCCTGCA...TAAACTCACTTTTGTATTCCGTTTTCTCACTCTTGATAGCCTTTGCAGCTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR CAA 90 bp | CTCAAAACTGAAAGAAAGACCCATTGTGGAAAGCCAATAGAAAGGTTTCCCAGCTCCCCGGTGACAGCGTaGTACCTGTGCCGAGTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LKTERKTHCGKPIERFPSSPVTA*YLCRVA Trigger: TGCTACTCGGCACAGGTACAACGCTGTCACCGGGGA...GCTGGGAAACCTTTCTATTGGCTTTCCACAATGGGTCTTTCTTTCAGTTTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS TCA 90 bp | GTCGGATGTTGTCATCACGGACAAAGCCTGAGTTGGAATTGTACTTaGTGTACTTGCCCTCAATGTAGTGCTCCAAGTGGAAGAGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VGCCHHGQSLSWNCT*CTCPQCSAPSGRGA Trigger: AGCCCCTCTTCCACTTGGAGCACTACATTGAGGGCAAGTACATCAAGTACAATTCCAACTCAGGCTTTGTCCGTGATGACAACATCCGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 |
||
| CDS-3UTR CAA 90 bp | CATTGTGGAAAGCCAATAGAAAGGTTTCCCAGCACATGGCCTGGAGACCCTGAGAAGCCTGAGTTGGAATaGTACTTGATGTACTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: HCGKPIERFPSTWPGDPEKPELE*YLMYLP Trigger: GGGCAAGTACATCAAGTACAATTCCAACTCAGGCTT...CTCAGGGTCTCCAGGCCATGTGCTGGGAAACCTTTCTATTGGCTTTCCACAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR CAA 90 bp | CAACATACCGCTCTCAAAACTGAAAGAAAGACCCATTGTGGAAAGCCAATAGAACCTTCATGGCTTCCATaGCTGCCTCAGCTGCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: QHTALKTERKTHCGKPIEPSWLP*LPQLPG Trigger: CCCAGGCAGCTGAGGCAGCAATGGAAGCCATGAAGG...TTCTATTGGCTTTCCACAATGGGTCTTTCTTTCAGTTTTGAGAGCGGTATGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR CAA 90 bp | GCAAAGATAGAGGCGGTAGATCTAATATCAGTGGTCAAATCAAAGCGGGCCATTGGGGTTAGTCGGATGTaGTCATCACGGACAAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: AKIEAVDLISVVKSKRAIGVSRM*SSRTKP Trigger: AGGCTTTGTCCGTGATGACAACATCCGACTAACCCC...AATGGCCCGCTTTGATTTGACCACTGATATTAGATCTACCGCCTCTATCTTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS-3UTR CAA 90 bp | CAACATACCGCTCTCAAAACTGAAAGAAAGACCCATTGTGGAAAGCCAATAGAAGTCTCCAGGGCTGTGTaGTACCAGTGCAAGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: QHTALKTERKTHCGKPIEVSRAV*YQCKAS Trigger: GGAAGCCTTGCACTGGTACAACACAGCCCTGGAGAC...TTCTATTGGCTTTCCACAATGGGTCTTTCTTTCAGTTTTGAGAGCGGTATGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR CAA 90 bp | TACACACACAATTGCAGCCACACTTCAGCCAGTTGCCTTGAGGTCAGAGACAAAGAGTTGGAATTGTACTaGATGTACTTGCCCTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: YTHNCSHTSASCLEVRDKELELY*MYLPSM Trigger: CATTGAGGGCAAGTACATCAAGTACAATTCCAACTC...TTTGTCTCTGACCTCAAGGCAACTGGCTGAAGTGTGGCTGCAATTGTGTGTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047875.16 |
||
| CDS-3UTR CAA 90 bp | ACCGCTCTCAAAACTGAAAGAAAGACCCATTGTGGAAAGCCAATAGAAAGGTTTGGGGTTAGTCGGATGTaGTCATCACGGACAAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: TALKTERKTHCGKPIERFGVSRM*SSRTKP Trigger: AGGCTTTGTCCGTGATGACAACATCCGACTAACCCC...AAACCTTTCTATTGGCTTTCCACAATGGGTCTTTCTTTCAGTTTTGAGAGCGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR CAA 90 bp | CTCAAAACTGAAAGAAAGACCCATTGTGGAAAGCCAATAGAAAGGTTTCCCAGCAAGCCTGAGTTGGAATaGTACTTGATGTACTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LKTERKTHCGKPIERFPSKPELE*YLMYLP Trigger: GGGCAAGTACATCAAGTACAATTCCAACTCAGGCTT...GCTGGGAAACCTTTCTATTGGCTTTCCACAATGGGTCTTTCTTTCAGTTTTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR CAA 90 bp | GGCCAGCTGCAAAGGCTATCAAGAGTGAGAAAACGGAATACAAAAGTGAGTTTACGGACAAAGCCTGAGTaGGAATTGTACTTGATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: GQLQRLSRVRKRNTKVSLRTKPE*ELYLMY Trigger: GTACATCAAGTACAATTCCAACTCAGGCTTTGTCCG...TAAACTCACTTTTGTATTCCGTTTTCTCACTCTTGATAGCCTTTGCAGCTGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR CAA 90 bp | CTCAAAACTGAAAGAAAGACCCATTGTGGAAAGCCAATAGAAAGGTTTCCCAGCTCAAAGCCTTTTGTCTaGTTCTCCTCTGTCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LKTERKTHCGKPIERFPSSKPFV*FSSVSF Trigger: GAAGGAGACAGAGGAGAACAAGACAAAAGGCTTTGA...GCTGGGAAACCTTTCTATTGGCTTTCCACAATGGGTCTTTCTTTCAGTTTTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR CAA 90 bp | CTCAAAACTGAAAGAAAGACCCATTGTGGAAAGCCAATAGAAAGGTTTCCCAGCGAGTTGGAATTGTACTaGATGTACTTGCCCTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: LKTERKTHCGKPIERFPSELELY*MYLPSM Trigger: CATTGAGGGCAAGTACATCAAGTACAATTCCAACTC...GCTGGGAAACCTTTCTATTGGCTTTCCACAATGGGTCTTTCTTTCAGTTTTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS-3UTR CAA 90 bp | CAACATACCGCTCTCAAAACTGAAAGAAAGACCCATTGTGGAAAGCCAATAGAATCAAAGCCTTTTGTCTaGTTCTCCTCTGTCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QHTALKTERKTHCGKPIESKPFV*FSSVSF Trigger: GAAGGAGACAGAGGAGAACAAGACAAAAGGCTTTGA...TTCTATTGGCTTTCCACAATGGGTCTTTCTTTCAGTTTTGAGAGCGGTATGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047875.16 ENSMUST00000106489.9 |
||
| CDS GCA 72 bp | TGCACTTCTAGGGCCACGGCCGAGGGCCTCGGCAGGTaGAGGCGGGAGGGATTGAGCAGGTTCCACGTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: CTSRATAEGLGR*RREGLSRFHVS Trigger: GGAGACGTGGAACCTGCTCAATCCCTCCCGCCTGCACCTGCCGAGGCCCTCGGCCGTGGCCCTAGAAGTGCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 |
||
| CDS GCA 72 bp | CCCGGTGAGCAGCATCTCCGCCTCCCTGGCCAGCAGTaGGTACTGGGGCTCGTCCTGTATCCCATCGTACTC | + |
|
Preference number: 6 (lower is better) Translates to: PGEQHLRLPGQQ*VLGLVLYPIVL Trigger: GAGTACGATGGGATACAGGACGAGCCCCAGTACGCACTGCTGGCCAGGGAGGCGGAGATGCTGCTCACCGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000047875.16 ENSMUST00000106487.9 ENSMUST00000106488.3 ENSMUST00000106489.9 ENSMUST00000146482.3 |
||
| CDS CCA 72 bp | AGCAGCATCTCCGCCTCCCTGGCCAGCAGTGCGTACTaGGGCTCGTCCTGTATCCCATCGTACTCCCCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SSISASLASSAY*GSSCIPSYSPP Trigger: AGGCGGGGAGTACGATGGGATACAGGACGAGCCCCAGTACGCACTGCTGGCCAGGGAGGCGGAGATGCTGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000047875.16 ENSMUST00000106487.9 ENSMUST00000106488.3 ENSMUST00000106489.9 ENSMUST00000146482.3 |
||
| CDS CCA 72 bp | AGTACACGCTCCTGTCCACCGGCTCGATGTAGCGCTTaGCCACGTAGTTGGAGGCCCCCTTCCATTGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: STRSCPPARCSA*PRSWRPPSIAG Trigger: CCCAGCAATGGAAGGGGGCCTCCAACTACGTGGCCAAGCGCTACATCGAGCCGGTGGACAGGAGCGTGTACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 |
||
| CDS CCA 72 bp | GGGCCCAGGCCTCTTCCGCCTTCTCGTAGTACTGGTTaGCTAGCCGGCCCTTCATGGCTTCCATTGCTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GPRPLPPSRSTG*LAGPSWLPLLP Trigger: AGGCAGCAATGGAAGCCATGAAGGGCCGGCTAGCCAACCAGTACTACGAGAAGGCGGAAGAGGCCTGGGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 ENSMUST00000146482.3 |
||
| CDS TCA 72 bp | CATCAGCCAGGATGTGGTGGGGCAGCTGAGAGTACATaGGGCCTAGGCCCACGATGGCCTCCAGTTCTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: HQPGCGGAAEST*GLGPRWPPVLP Trigger: TGGGAGAACTGGAGGCCATCGTGGGCCTAGGCCTCATGTACTCTCAGCTGCCCCACCACATCCTGGCTGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 |
||
| CDS TCA 72 bp | ATCTTTGGGGGTTCTTGTCCAGTCCAAATCCCCCGGTaGGCAGCATCTCCGCCTCCCTGGCCAGCAGTGCGT | + |
|
Preference number: 6 (lower is better) Translates to: IFGGSCPVQIPR*AASPPPWPAVR Trigger: ACGCACTGCTGGCCAGGGAGGCGGAGATGCTGCTCACCGGGGGATTTGGACTGGACAAGAACCCCCAAAGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000047875.16 ENSMUST00000106487.9 ENSMUST00000106488.3 ENSMUST00000106489.9 ENSMUST00000146482.3 |
||
| CDS GCA 72 bp | CGTCCAGAGCTGCCCAGGCTATCCTCGTCAGATTCATaGCTTCGGTTGCCGTTGGAGTGGCCGTGTTCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: RPELPRLSSSDS*LRLPLEWPCSR Trigger: CCGAGAACACGGCCACTCCAACGGCAACCGAAGGCATGAATCTGACGAGGATAGCCTGGGCAGCTCTGGACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 ENSMUST00000146482.3 |
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| CDS CCA 72 bp | TGTCCACCGGCTCGATGTAGCGCTTGGCCACGTAGTTaGAGGCCCCCTTCCATTGCTGGGCGTGCAAGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: CPPARCSAWPRS*RPPSIAGRARS Trigger: ACTTCTTGCACGCCCAGCAATGGAAGGGGGCCTCCAACTACGTGGCCAAGCGCTACATCGAGCCGGTGGACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 |
||
| CDS CAA 72 bp | CTGCCCAGGCTATCCTCGTCAGATTCATGCCTTCGGTaGCCGTTGGAGTGGCCGTGTTCTCGGGGCTCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LPRLSSSDSCLR*PLEWPCSRGSG Trigger: TCCTGAGCCCCGAGAACACGGCCACTCCAACGGCAACCGAAGGCATGAATCTGACGAGGATAGCCTGGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 ENSMUST00000146482.3 |
||
| CDS TCA 72 bp | TTCAGAGAGACATCAGCCAGGATGTGGTGGGGCAGCTaGGAGTACATGAGGCCTAGGCCCACGATGGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: FRETSARMWWGS*EYMRPRPTMAS Trigger: GGAGGCCATCGTGGGCCTAGGCCTCATGTACTCTCAGCTGCCCCACCACATCCTGGCTGATGTCTCTCTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 |
||
| CDS GCA 72 bp | GCAGGTTCCACGTCTCCACACAGACCCGTCCAGAGCTaGCCAGGCTATCCTCGTCAGATTCATGCCTTCGGT | + |
|
Preference number: 6 (lower is better) Translates to: AGSTSPHRPVQS*PGYPRQIHAFG Trigger: ACCGAAGGCATGAATCTGACGAGGATAGCCTGGGCAGCTCTGGACGGGTCTGTGTGGAGACGTGGAACCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 |
||
| CDS CCA 72 bp | TCTCGCAGAAGCGCCCGCCCTCGTGGTATCGCACCATaGCCAAATGGACCTTCCCCAAAACAGACTTCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: SRRSARPRGIAP*PNGPSPKQTSR Trigger: TCGGGAAGTCTGTTTTGGGGAAGGTCCATTTGGCCATGGTGCGATACCACGAGGGCGGGCGCTTCTGCGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 |
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| CDS CCA 72 bp | CACTCCTCATCCTTCTCGCAGAAGCGCCCGCCCTCGTaGTATCGCACCATGGCCAAATGGACCTTCCCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: HSSSFSQKRPPS*YRTMAKWTFPK Trigger: TTTGGGGAAGGTCCATTTGGCCATGGTGCGATACCACGAGGGCGGGCGCTTCTGCGAGAAGGATGAGGAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 |
||
| CDS CAA 72 bp | CCCTCATCATCGTCACTGTCTGTGTCAGAGTCCGCATaGTGGCCAGCTCGGGAGCACCTGCCACCGTCAACA | + |
|
Preference number: 6 (lower is better) Translates to: PSSSSLSVSESA*WPAREHLPPST Trigger: TGTTGACGGTGGCAGGTGCTCCCGAGCTGGCCACAATGCGGACTCTGACACAGACAGTGACGATGATGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 ENSMUST00000143279.3 ENSMUST00000143322.9 |
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| CDS CAA 90 bp | GCCTCAGCTGCCTGGGTGTACAAATCTCCTGATCTTTGGGGGTTCTaGTCCAGTCCAAATCCCCCGGTGAGCAGCATCTCCGCCTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: ASAAWVYKSPDLWGF*SSPNPPVSSISASL Trigger: CAGGGAGGCGGAGATGCTGCTCACCGGGGGATTTGGACTGGACAAGAACCCCCAAAGATCAGGAGATTTGTACACCCAGGCAGCTGAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 ENSMUST00000146482.3 |
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| CDS CAA 90 bp | CGGCTCGATGTAGCGCTTGGCCACGTAGTTGGAGGCCCCCTTCCATaGCTGGGCGTGCAAGAAGTTGGAGAGTTTCTTCGTCCTGAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RLDVALGHVVGGPLP*LGVQEVGEFLRPEA Trigger: TGCTTCAGGACGAAGAAACTCTCCAACTTCTTGCACGCCCAGCAATGGAAGGGGGCCTCCAACTACGTGGCCAAGCGCTACATCGAGCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 |
||
| CDS CAA 90 bp | GCTCGTCCTGTATCCCATCGTACTCCCCGCCTTCATCGCAGTCTGTaGTCTCCAGGGCTGTGTTGTACCAGTGCAAGGCTTCCGACCAGT | + |
|
Preference number: 6 (lower is better) Translates to: ARPVSHRTPRLHRSL*SPGLCCTSARLPTS Trigger: ACTGGTCGGAAGCCTTGCACTGGTACAACACAGCCCTGGAGACAACAGACTGCGATGAAGGCGGGGAGTACGATGGGATACAGGACGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000047875.16 ENSMUST00000106487.9 ENSMUST00000106488.3 ENSMUST00000106489.9 ENSMUST00000146482.3 |
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| CDS TCA 72 bp | GCAAGGCTTCCGACCAGTCTTGACACCTGTCTGGGCTaGGGTTCAGGCCAGTGTCAAAAGCTCGGGCCACTA | + |
|
Preference number: 6 (lower is better) Translates to: ARLPTSLDTCLG*GSGQCQKLGPL Trigger: TAGTGGCCCGAGCTTTTGACACTGGCCTGAACCTCAGCCCAGACAGGTGTCAAGACTGGTCGGAAGCCTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000047875.16 ENSMUST00000106487.9 ENSMUST00000106488.3 ENSMUST00000106489.9 ENSMUST00000146482.3 |
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| CDS CCA 72 bp | TCATCATCGTCACTGTCTGTGTCAGAGTCCGCATTGTaGCCAGCTCGGGAGCACCTGCCACCGTCAACACCT | + |
|
Preference number: 6 (lower is better) Translates to: SSSSLSVSESAL*PAREHLPPSTP Trigger: AGGTGTTGACGGTGGCAGGTGCTCCCGAGCTGGCCACAATGCGGACTCTGACACAGACAGTGACGATGATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 ENSMUST00000143279.3 ENSMUST00000143322.9 |
||
| CDS CCA 72 bp | TCCTCGTCAGATTCATGCCTTCGGTTGCCGTTGGAGTaGCCGTGTTCTCGGGGCTCAGGATCATCCAGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSSDSCLRLPLE*PCSRGSGSSRS Trigger: TGACCTGGATGATCCTGAGCCCCGAGAACACGGCCACTCCAACGGCAACCGAAGGCATGAATCTGACGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 ENSMUST00000146482.3 |
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| CDS CCA 72 bp | GGCTATCCTCGTCAGATTCATGCCTTCGGTTGCCGTTaGAGTGGCCGTGTTCTCGGGGCTCAGGATCATCCA | + |
|
Preference number: 6 (lower is better) Translates to: GYPRQIHAFGCR*SGRVLGAQDHP Trigger: TGGATGATCCTGAGCCCCGAGAACACGGCCACTCCAACGGCAACCGAAGGCATGAATCTGACGAGGATAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 ENSMUST00000146482.3 |
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| CDS CCA 72 bp | CCTTCTCGTAGTACTGGTTGGCTAGCCGGCCCTTCATaGCTTCCATTGCTGCCTCAGCTGCCTGGGTGTACA | + |
|
Preference number: 6 (lower is better) Translates to: PSRSTGWLAGPS*LPLLPQLPGCT Trigger: TGTACACCCAGGCAGCTGAGGCAGCAATGGAAGCCATGAAGGGCCGGCTAGCCAACCAGTACTACGAGAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 ENSMUST00000146482.3 |
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| CDS CAA 72 bp | AGGCTATCCTCGTCAGATTCATGCCTTCGGTTGCCGTaGGAGTGGCCGTGTTCTCGGGGCTCAGGATCATCC | + |
|
Preference number: 6 (lower is better) Translates to: RLSSSDSCLRLP*EWPCSRGSGSS Trigger: GGATGATCCTGAGCCCCGAGAACACGGCCACTCCAACGGCAACCGAAGGCATGAATCTGACGAGGATAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 ENSMUST00000146482.3 |
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| CDS TCA 72 bp | GGATACCCACTGTCCCCACTATTCTCAGAGTCCCGGTaGTTGTCCATGCGGTCATGGTCTCTAGGGCCCATG | + |
|
Preference number: 6 (lower is better) Translates to: GYPLSPLFSESR*LSMRSWSLGPM Trigger: CATGGGCCCTAGAGACCATGACCGCATGGACAATCACCGGGACTCTGAGAATAGTGGGGACAGTGGGTATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 |
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| CDS GCA 72 bp | CAGGGGTCAGGCATGTGCTTGGCTTTCTCGATCGCATaGTTCCAGGCTTCCTTGAAGTGGAAGGAGCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: QGSGMCLAFSIA*FQASLKWKELA Trigger: AGCCAGCTCCTTCCACTTCAAGGAAGCCTGGAAGCATGCGATCGAGAAAGCCAAGCACATGCCTGACCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 ENSMUST00000143322.9 |
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| CDS CCA 72 bp | TGCCGAGTAGCATGTTCTGTGGCGATGTCCTCGAGATaGAATTCAGCCCAGGGGTCAGGCATGTGCTTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: CRVACSVAMSSR*NSAQGSGMCLA Trigger: AGCCAAGCACATGCCTGACCCCTGGGCTGAATTCCATCTCGAGGACATCGCCACAGAACATGCTACTCGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 ENSMUST00000143322.9 |
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| CDS CCA 72 bp | TCCCCCTCAAGATGGTCTTGGCTGATTGCAATAGCCTaGTGCTCTGATTCACCGCATCCTGTTCCCGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SPSRWSWLIAIA*CSDSPHPVPVG Trigger: CCCCACGGGAACAGGATGCGGTGAATCAGAGCACCAGGCTATTGCAATCAGCCAAGACCATCTTGAGGGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 |
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| CDS CCA 72 bp | TCACCAAACACTGGCCAATGGAGGTGGTCCAGTTTCTaGCTGTGTGGTGTAGCTGAAGACGGGGAGGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SPNTGQWRWSSF*LCGVAEDGEEG Trigger: GCCTTCCTCCCCGTCTTCAGCTACACCACACAGCCAGAAACTGGACCACCTCCATTGGCCAGTGTTTGGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 |
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| CDS CCA 72 bp | GGGCTCAGGATCATCCAGGTCACTTCGCTTCTCGCTTaGATACCCACTGTCCCCACTATTCTCAGAGTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: GLRIIQVTSLLA*IPTVPTILRVP Trigger: CGGGACTCTGAGAATAGTGGGGACAGTGGGTATCCAAGCGAGAAGCGAAGTGACCTGGATGATCCTGAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 ENSMUST00000146482.3 |
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| CDS CAA 72 bp | GTAGCGCTTGGCCACGTAGTTGGAGGCCCCCTTCCATaGCTGGGCGTGCAAGAAGTTGGAGAGTTTCTTCGT | + |
|
Preference number: 6 (lower is better) Translates to: VALGHVVGGPLP*LGVQEVGEFLR Trigger: ACGAAGAAACTCTCCAACTTCTTGCACGCCCAGCAATGGAAGGGGGCCTCCAACTACGTGGCCAAGCGCTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 |
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| CDS CAA 72 bp | GGGGCTCAGGATCATCCAGGTCACTTCGCTTCTCGCTaGGATACCCACTGTCCCCACTATTCTCAGAGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: GAQDHPGHFASR*DTHCPHYSQSP Trigger: GGGACTCTGAGAATAGTGGGGACAGTGGGTATCCAAGCGAGAAGCGAAGTGACCTGGATGATCCTGAGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 ENSMUST00000146482.3 |
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| CDS CAA 72 bp | AGTACTGGTTGGCTAGCCGGCCCTTCATGGCTTCCATaGCTGCCTCAGCTGCCTGGGTGTACAAATCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: STGWLAGPSWLP*LPQLPGCTNLL Trigger: CAGGAGATTTGTACACCCAGGCAGCTGAGGCAGCAATGGAAGCCATGAAGGGCCGGCTAGCCAACCAGTACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 ENSMUST00000146482.3 |
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| CDS CAA 90 bp | CGTGTTCTCGGGGCTCAGGATCATCCAGGTCACTTCGCTTCTCGCTaGGATACCCACTGTCCCCACTATTCTCAGAGTCCCGGTGATTGT | + |
|
Preference number: 6 (lower is better) Translates to: RVLGAQDHPGHFASR*DTHCPHYSQSPGDC Trigger: ACAATCACCGGGACTCTGAGAATAGTGGGGACAGTGGGTATCCAAGCGAGAAGCGAAGTGACCTGGATGATCCTGAGCCCCGAGAACACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 |
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| CDS CAA 90 bp | CCTTCTCGTAGTACTGGTTGGCTAGCCGGCCCTTCATGGCTTCCATaGCTGCCTCAGCTGCCTGGGTGTACAAATCTCCTGATCTTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: PSRSTGWLAGPSWLP*LPQLPGCTNLLIFG Trigger: CCCAAAGATCAGGAGATTTGTACACCCAGGCAGCTGAGGCAGCAATGGAAGCCATGAAGGGCCGGCTAGCCAACCAGTACTACGAGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 ENSMUST00000146482.3 |
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| CDS TCA 72 bp | TCCCAGGTCAGCTGCATGCTCCAGATGGAAGATGGCTaGCTCTCGATCCCACTCCTCATCCTTCTCGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: SQVSCMLQMEDG*LSIPLLILLAE Trigger: TTCTGCGAGAAGGATGAGGAGTGGGATCGAGAGTCAGCCATCTTCCATCTGGAGCATGCAGCTGACCTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 |
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| CDS GCA 72 bp | TCTTTCAGCCATTCCCCGGTGACAGCGTTGTACCTGTaGCGAGTAGCATGTTCTGTGGCGATGTCCTCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SFSHSPVTALYL*RVACSVAMSSR Trigger: TCTCGAGGACATCGCCACAGAACATGCTACTCGGCACAGGTACAACGCTGTCACCGGGGAATGGCTGAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 ENSMUST00000143322.9 |
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| CDS GCA 72 bp | GTTGGAGAGTTTCTTCGTCCTGAAGCACTCCCTCATTaGTCCACGGCCGAAGGGCTGAGACGCCATCTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: VGEFLRPEALPH*STAEGLRRHLD Trigger: ATCAAGATGGCGTCTCAGCCCTTCGGCCGTGGAGCAATGAGGGAGTGCTTCAGGACGAAGAAACTCTCCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 ENSMUST00000143322.9 |
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| CDS CCA 72 bp | GGGGACTCCCACACTTCTCCTCTGTCCCCCTCAAGATaGTCTTGGCTGATTGCAATAGCCTGGTGCTCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: GDSHTSPLSPSR*SWLIAIAWCSD Trigger: ATCAGAGCACCAGGCTATTGCAATCAGCCAAGACCATCTTGAGGGGGACAGAGGAGAAGTGTGGGAGTCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 |
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| CDS CAA 72 bp | AGAACCTCGTCTTTCAGCCATTCCCCGGTGACAGCGTaGTACCTGTGCCGAGTAGCATGTTCTGTGGCGATG | + |
|
Preference number: 6 (lower is better) Translates to: RTSSFSHSPVTA*YLCRVACSVAM Trigger: CATCGCCACAGAACATGCTACTCGGCACAGGTACAACGCTGTCACCGGGGAATGGCTGAAAGACGAGGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 ENSMUST00000143322.9 |
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| CDS CAA 72 bp | GTATCCCATCGTACTCCCCGCCTTCATCGCAGTCTGTaGTCTCCAGGGCTGTGTTGTACCAGTGCAAGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: VSHRTPRLHRSL*SPGLCCTSARL Trigger: AAGCCTTGCACTGGTACAACACAGCCCTGGAGACAACAGACTGCGATGAAGGCGGGGAGTACGATGGGATAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000047875.16 ENSMUST00000106487.9 ENSMUST00000106488.3 ENSMUST00000106489.9 ENSMUST00000146482.3 |
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| CDS CAA 72 bp | GCCTGGGTGTACAAATCTCCTGATCTTTGGGGGTTCTaGTCCAGTCCAAATCCCCCGGTGAGCAGCATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: AWVYKSPDLWGF*SSPNPPVSSIS Trigger: GGAGATGCTGCTCACCGGGGGATTTGGACTGGACAAGAACCCCCAAAGATCAGGAGATTTGTACACCCAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 ENSMUST00000146482.3 |
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| CDS CCA 72 bp | TCCCACACTTCTCCTCTGTCCCCCTCAAGATGGTCTTaGCTGATTGCAATAGCCTGGTGCTCTGATTCACCG | + |
|
Preference number: 6 (lower is better) Translates to: SHTSPLSPSRWS*LIAIAWCSDSP Trigger: CGGTGAATCAGAGCACCAGGCTATTGCAATCAGCCAAGACCATCTTGAGGGGGACAGAGGAGAAGTGTGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 |
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| CDS CAA 72 bp | TTGGAGGCCCCCTTCCATTGCTGGGCGTGCAAGAAGTaGGAGAGTTTCTTCGTCCTGAAGCACTCCCTCATT | + |
|
Preference number: 6 (lower is better) Translates to: LEAPFHCWACKK*ESFFVLKHSLI Trigger: AATGAGGGAGTGCTTCAGGACGAAGAAACTCTCCAACTTCTTGCACGCCCAGCAATGGAAGGGGGCCTCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 |
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| CDS CAA 90 bp | ATCTTGATCAGAACCTCGTCTTTCAGCCATTCCCCGGTGACAGCGTaGTACCTGTGCCGAGTAGCATGTTCTGTGGCGATGTCCTCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: ILIRTSSFSHSPVTA*YLCRVACSVAMSSR Trigger: TCTCGAGGACATCGCCACAGAACATGCTACTCGGCACAGGTACAACGCTGTCACCGGGGAATGGCTGAAAGACGAGGTTCTGATCAAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 ENSMUST00000143322.9 |
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| CDS CAA 90 bp | GCCTGTCACCAGCTTCTGCCGCCTTCAGTAAGTAATCAAAGCCTTTaGTCTTGTTCTCCTCTGTCTCCCGTCCAGAGCTGCCCAGGCTAT | + |
|
Preference number: 6 (lower is better) Translates to: ACHQLLPPSVSNQSL*SCSPLSPVQSCPGY Trigger: ATAGCCTGGGCAGCTCTGGACGGGAGACAGAGGAGAACAAGACAAAAGGCTTTGATTACTTACTGAAGGCGGCAGAAGCTGGTGACAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146482.3 |
||
| CDS CCA 72 bp | TCAGGCCAGTGTCAAAAGCTCGGGCCACTAAAATCATaGAATGCCTGTCACCAGCTTCTGCCGCCTTCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: SGQCQKLGPLKS*NACHQLLPPSV Trigger: TACTGAAGGCGGCAGAAGCTGGTGACAGGCATTCCATGATTTTAGTGGCCCGAGCTTTTGACACTGGCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000047875.16 ENSMUST00000106487.9 ENSMUST00000106488.3 ENSMUST00000106489.9 ENSMUST00000146482.3 |
||
| CDS CAA 72 bp | AGCTGGCTGGTGACCCTGTGGAGCCGCACTCTGTTTTaGTTAGGTTGCTATAGTAGCTCTGGACTTTGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SWLVTLWSRTLF*LGCYSSSGLWS Trigger: GCTCCAAAGTCCAGAGCTACTATAGCAACCTAACAAAAACAGAGTGCGGCTCCACAGGGTCACCAGCCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 ENSMUST00000143322.9 |
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| CDS CAA 72 bp | CAGCTTCTGCCGCCTTCAGTAAGTAATCAAAGCCTTTaGTCTTGTTCTCCTCTGTCTCCCGTCCAGAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: QLLPPSVSNQSL*SCSPLSPVQSC Trigger: GCAGCTCTGGACGGGAGACAGAGGAGAACAAGACAAAAGGCTTTGATTACTTACTGAAGGCGGCAGAAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146482.3 |
||
| CDS CAA 90 bp | GCCTGTCACCAGCTTCTGCCGCCTTCAGTAAGTAATCAAAGCCTTTaGTCTTGTTCTCCTCTGTCTCCTTCAGAGAGACATCAGCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: ACHQLLPPSVSNQSL*SCSPLSPSERHQPG Trigger: TCCTGGCTGATGTCTCTCTGAAGGAGACAGAGGAGAACAAGACAAAAGGCTTTGATTACTTACTGAAGGCGGCAGAAGCTGGTGACAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047875.16 ENSMUST00000106487.9 ENSMUST00000106488.3 ENSMUST00000106489.9 |
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| CDS GCA 72 bp | TTCCCCGGACACCAAGGTTACCATCTCCAAAGTCAGTaGCTTTCTCAGTGTGGATCTGTGGGTCGGTATAAA | + |
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Preference number: 6 (lower is better) Translates to: FPGHQGYHLQSQ*LSQCGSVGRYK Trigger: TTTATACCGACCCACAGATCCACACTGAGAAAGGCACTGACTTTGGAGATGGTAACCTTGGTGTCCGGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 |
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| CDS CAA 72 bp | GTGAAATGGCTGAAGGCCTGTGGGGTTAGTCGGATGTaGTCATCACGGACAAAGCCTGAGTTGGAATTGTAC | + |
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Preference number: 6 (lower is better) Translates to: VKWLKACGVSRM*SSRTKPELELY Trigger: GTACAATTCCAACTCAGGCTTTGTCCGTGATGACAACATCCGACTAACCCCACAGGCCTTCAGCCATTTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 |
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| CDS TCA 72 bp | TGTCATCACGGACAAAGCCTGAGTTGGAATTGTACTTaGTGTACTTGCCCTCAATGTAGTGCTCCAAGTGGA | + |
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Preference number: 6 (lower is better) Translates to: CHHGQSLSWNCT*CTCPQCSAPSG Trigger: TCCACTTGGAGCACTACATTGAGGGCAAGTACATCAAGTACAATTCCAACTCAGGCTTTGTCCGTGATGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047875.16 ENSMUST00000106488.3 ENSMUST00000106489.9 |
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| CDS CAA 72 bp | CAGCTTCTGCCGCCTTCAGTAAGTAATCAAAGCCTTTaGTCTTGTTCTCCTCTGTCTCCTTCAGAGAGACAT | + |
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Preference number: 6 (lower is better) Translates to: QLLPPSVSNQSL*SCSPLSPSERH Trigger: ATGTCTCTCTGAAGGAGACAGAGGAGAACAAGACAAAAGGCTTTGATTACTTACTGAAGGCGGCAGAAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047875.16 ENSMUST00000106487.9 ENSMUST00000106488.3 ENSMUST00000106489.9 |
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