Pregenerated sensors for EEF1E1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001707Ensembl transcript IDs: ENSMUST00000001757.9
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCAGAGTCTGCCCTCCGTGCTTTGTGAGTCAGTATGAGTTAACATaGAGATGCCAGTACAGGGCCCAGAACACAGTAGGTGGTTCCACT | + |
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Preference number: 1 (lower is better) Translates to: GRVCPPCFVSQYELT*RCQYRAQNTVGGST Trigger: AGTGGAACCACCTACTGTGTTCTGGGCCCTGTACTGGCATCTTCATGTTAACTCATACTGACTCACAAAGCACGGAGGGCAGACTCTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| 3UTR TCA 90 bp | TCTAGCATGTGGCAGAGTCTGCCCTCCGTGCTTTGTGAGTCAGTATaGGTTAACATGAAGATGCCAGTACAGGGCCCAGAACACAGTAGG | + |
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Preference number: 1 (lower is better) Translates to: SSMWQSLPSVLCESV*VNMKMPVQGPEHSR Trigger: CCTACTGTGTTCTGGGCCCTGTACTGGCATCTTCATGTTAACTCATACTGACTCACAAAGCACGGAGGGCAGACTCTGCCACATGCTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| 3UTR CCA 90 bp | CCTACATTGTTTTCTCAAATCCAAGTTTCCCTGTGTAGGCTAGGCTaGCCTTGGAGTGGTCTGTTCTCACTCAGCCATACTATGGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: PTLFSQIQVSLCRLG*PWSGLFSLSHTMAG Trigger: CCCAGCCATAGTATGGCTGAGTGAGAACAGACCACTCCAAGGCCAGCCTAGCCTACACAGGGAAACTTGGATTTGAGAAAACAATGTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| 3UTR CCA 90 bp | AATGCATTTAACTCCCTGGTGGTGGGGGTGGGGCGCTCAGTGATGTaGTTCACCTCAGTAGATACTGACTACAGGAAAGATAACAAACAA | + |
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Preference number: 1 (lower is better) Translates to: NAFNSLVVGVGRSVM*FTSVDTDYRKDNKQ Trigger: TTGTTTGTTATCTTTCCTGTAGTCAGTATCTACTGAGGTGAACCACATCACTGAGCGCCCCACCCCCACCACCAGGGAGTTAAATGCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| 3UTR CCA 90 bp | TTGTTTTCTCAAATCCAAGTTTCCCTGTGTAGGCTAGGCTGGCCTTaGAGTGGTCTGTTCTCACTCAGCCATACTATGGCTGGGTTACAA | + |
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Preference number: 1 (lower is better) Translates to: LFSQIQVSLCRLGWP*SGLFSLSHTMAGLQ Trigger: TTGTAACCCAGCCATAGTATGGCTGAGTGAGAACAGACCACTCCAAGGCCAGCCTAGCCTACACAGGGAAACTTGGATTTGAGAAAACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| 3UTR CCA 90 bp | GGACTCATCCCAAGAGCTGAATATTTCCAAATCTTGCTCTCTCCCTaGAACTTTGAATCATACCACCTAGGACACTCTCCCTTCTCTGCC | + |
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Preference number: 1 (lower is better) Translates to: GLIPRAEYFQILLSP*NFESYHLGHSPFSA Trigger: GGCAGAGAAGGGAGAGTGTCCTAGGTGGTATGATTCAAAGTTCCAGGGAGAGAGCAAGATTTGGAAATATTCAGCTCTTGGGATGAGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| 3UTR TCA 90 bp | TGGGAAGATGAGCTCTCTCTCAATAACCTGTCAGTATTAAACCAATaGGAGCGAGTTACAGCAAGAATAGAGCCATGGTTAACAGTGTCC | + |
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Preference number: 1 (lower is better) Translates to: WEDELSLNNLSVLNQ*ERVTARIEPWLTVS Trigger: GGACACTGTTAACCATGGCTCTATTCTTGCTGTAACTCGCTCTCATTGGTTTAATACTGACAGGTTATTGAGAGAGAGCTCATCTTCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| 3UTR-3UTR CCA 90 bp | ACACTCTCCCTTCTCTGCCTCTCCCAGTGCTGGGGACTGAACACAGGACCTAGTTTTCCATTACACTTCTaGCTGCTGCACAGCGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: TLSLLCLSQCWGLNTGPSFPLHF*LLHSEG Trigger: GCCCTCGCTGTGCAGCAGCCAGAAGTGTAATGGAAA...ACTAGGTCCTGTGTTCAGTCCCCAGCACTGGGAGAGGCAGAGAAGGGAGAGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| 3UTR-3UTR TCA 90 bp | ATTAAATACACTTGCAGTAGACACTCAGCAGTCAGCAAACGGATCTGGGGGCATCCCAGTGCTGGGGACTaGACACAGGACCTAGTGCGT | + |
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Preference number: 2 (lower is better) Translates to: IKYTCSRHSAVSKRIWGHPSAGD*TQDLVR Trigger: ACGCACTAGGTCCTGTGTTCAGTCCCCAGCACTGGG...ATGCCCCCAGATCCGTTTGCTGACTGCTGAGTGTCTACTGCAAGTGTATTTAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| 3UTR-3UTR GCA 90 bp | TGGGAAAGAGGCATCCACTTCTCAAAACAGCACACATCTGAGTGGTCGCAGTTTCTCTGCCTCTCCCAGTaGTGGGGACTGAACACAGGA | + |
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Preference number: 2 (lower is better) Translates to: WERGIHFSKQHTSEWSQFLCLSQ*WGLNTG Trigger: TCCTGTGTTCAGTCCCCAGCACTGGGAGAGGCAGAG...AAACTGCGACCACTCAGATGTGTGCTGTTTTGAGAAGTGGATGCCTCTTTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| 3UTR-3UTR GCA 90 bp | TGGGAAAGAGGCATCCACTTCTCAAAACAGCACACATCTGAGTGGTCGCAGTTTACACTCTCCCTTCTCTaGCTCTCCCAGTGCTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: WERGIHFSKQHTSEWSQFTLSLL*LSQCWG Trigger: TCCCCAGCACTGGGAGAGGCAGAGAAGGGAGAGTGT...AAACTGCGACCACTCAGATGTGTGCTGTTTTGAGAAGTGGATGCCTCTTTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| 3UTR-3UTR CCA 90 bp | CACTTCTCAAAACAGCACACATCTGAGTGGTCGCAGTTTTCCAAGCATCTCACACATTTAACTCCCTGGTaGTGGGGGTGGGGCGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: HFSKQHTSEWSQFSKHLTHLTPW*WGWGAQ Trigger: CTGAGCGCCCCACCCCCACCACCAGGGAGTTAAATG...TGTGAGATGCTTGGAAAACTGCGACCACTCAGATGTGTGCTGTTTTGAGAAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| 3UTR-3UTR CCA 90 bp | ACATCTGAGTGGTCGCAGTTTTCCAAGCATCTCACAGACGTCTGTCTCAGACGTTGTCCCTGTTCTTCTTaGCACTGCATCAGCGGACTC | + |
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Preference number: 2 (lower is better) Translates to: TSEWSQFSKHLTDVCLRRCPCSS*HCISGL Trigger: GAGTCCGCTGATGCAGTGCCAAGAAGAACAGGGACA...ACGTCTGAGACAGACGTCTGTGAGATGCTTGGAAAACTGCGACCACTCAGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| 3UTR-3UTR CCA 90 bp | TGGGAAAGAGGCATCCACTTCTCAAAACAGCACACATCTGAGTGGTCGCAGTTTAGGCTGGCCTTGGAGTaGTCTGTTCTCACTCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: WERGIHFSKQHTSEWSQFRLALE*SVLTQP Trigger: TGGCTGAGTGAGAACAGACCACTCCAAGGCCAGCCT...AAACTGCGACCACTCAGATGTGTGCTGTTTTGAGAAGTGGATGCCTCTTTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| 3UTR-3UTR CCA 90 bp | ATACCTGAGTCCTCCTCTCTTATTTGGGAAGATGAGCTCTCTCTCAATAACCTGATGCATTTAACTCCCTaGTGGTGGGGGTGGGGCGCT | + |
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Preference number: 2 (lower is better) Translates to: IPESSSLIWEDELSLNNLMHLTP*WWGWGA Trigger: AGCGCCCCACCCCCACCACCAGGGAGTTAAATGCAT...CAGGTTATTGAGAGAGAGCTCATCTTCCCAAATAAGAGAGGAGGACTCAGGTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| 3UTR-3UTR CCA 90 bp | ACTTCTCAAAACAGCACACATCTGAGTGGTCGCAGTTTTCCAAGCATCTCACAGCTCAAGGACGGCAGGTaGGGAGGACCAACATGTAGT | + |
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Preference number: 2 (lower is better) Translates to: TSQNSTHLSGRSFPSISQLKDGR*GGPTCS Trigger: ACTACATGTTGGTCCTCCCCACCTGCCGTCCTTGAG...CTGTGAGATGCTTGGAAAACTGCGACCACTCAGATGTGTGCTGTTTTGAGAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| 3UTR-3UTR CCA 90 bp | CTGAGTGGTCGCAGTTTTCCAAGCATCTCACAGACGTCTGTCTCAGACGTAAAGTCCTCCTCTCTTATTTaGGAAGATGAGCTCTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: LSGRSFPSISQTSVSDVKSSSLI*EDELSL Trigger: GAGAGAGAGCTCATCTTCCCAAATAAGAGAGGAGGA...CTTTACGTCTGAGACAGACGTCTGTGAGATGCTTGGAAAACTGCGACCACTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| 3UTR-3UTR TCA 90 bp | TGGGAAAGAGGCATCCACTTCTCAAAACAGCACACATCTGAGTGGTCGCAGTTTGATTACCATCAAAAGTaGAACAAGACCAGCAACCTC | + |
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Preference number: 2 (lower is better) Translates to: WERGIHFSKQHTSEWSQFDYHQK*NKTSNL Trigger: GAGGTTGCTGGTCTTGTTTCACTTTTGATGGTAATC...AAACTGCGACCACTCAGATGTGTGCTGTTTTGAGAAGTGGATGCCTCTTTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| 3UTR-3UTR TCA 90 bp | ATTAAATACACTTGCAGTAGACACTCAGCAGTCAGCAAACGGATCTGGGGGCATTTCCCCATGATTAGATaGTTTGCTGCCTTTTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: IKYTCSRHSAVSKRIWGHFPMIR*FAAFCL Trigger: AAGACAAAAGGCAGCAAATCATCTAATCATGGGGAA...ATGCCCCCAGATCCGTTTGCTGACTGCTGAGTGTCTACTGCAAGTGTATTTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| 3UTR-3UTR GCA 90 bp | TGGGAAAGAGGCATCCACTTCTCAAAACAGCACACATCTGAGTGGTCGCAGTTTAATATTTCCAAATCTTaGTCTCTCCCTGGAACTTTG | + |
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Preference number: 2 (lower is better) Translates to: WERGIHFSKQHTSEWSQFNISKS*SLPGTL Trigger: CAAAGTTCCAGGGAGAGAGCAAGATTTGGAAATATT...AAACTGCGACCACTCAGATGTGTGCTGTTTTGAGAAGTGGATGCCTCTTTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| 3UTR-3UTR TCA 90 bp | ATACCTGAGTCCTCCTCTCTTATTTGGGAAGATGAGCTCTCTCTCAATAACCTGGTTGAGATGAGATGGTaGATAAAGCCCAGTTTCTAT | + |
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Preference number: 2 (lower is better) Translates to: IPESSSLIWEDELSLNNLVEMRW*IKPSFY Trigger: ATAGAAACTGGGCTTTATTCACCATCTCATCTCAAC...CAGGTTATTGAGAGAGAGCTCATCTTCCCAAATAAGAGAGGAGGACTCAGGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| 3UTR-3UTR CCA 90 bp | CTGTGCTCAAAAATCATGAGCTTAATGACAAAAAGAGGACTCATCCCAAGAGCTGCAAGAATAGAGCCATaGTTAACAGTGTCCCTGTTC | + |
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Preference number: 2 (lower is better) Translates to: LCSKIMSLMTKRGLIPRAARIEP*LTVSLF Trigger: GAACAGGGACACTGTTAACCATGGCTCTATTCTTGC...AGCTCTTGGGATGAGTCCTCTTTTTGTCATTAAGCTCATGATTTTTGAGCACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| 3UTR-3UTR TCA 90 bp | TTGAGTTACACCCTGGCCCTACATTGTTTTCTCAAATCCAAGTTTCCCTGTGTATCAGTATTAAACCAATaGGAGCGAGTTACAGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: LSYTLALHCFLKSKFPCVSVLNQ*ERVTAR Trigger: TCTTGCTGTAACTCGCTCTCATTGGTTTAATACTGA...TACACAGGGAAACTTGGATTTGAGAAAACAATGTAGGGCCAGGGTGTAACTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| 3UTR CCA 72 bp | AACTCCCTGGTGGTGGGGGTGGGGCGCTCAGTGATGTaGTTCACCTCAGTAGATACTGACTACAGGAAAGAT | + |
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Preference number: 3 (lower is better) Translates to: NSLVVGVGRSVM*FTSVDTDYRKD Trigger: ATCTTTCCTGTAGTCAGTATCTACTGAGGTGAACCACATCACTGAGCGCCCCACCCCCACCACCAGGGAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| 3UTR CCA 72 bp | CAAATCCAAGTTTCCCTGTGTAGGCTAGGCTGGCCTTaGAGTGGTCTGTTCTCACTCAGCCATACTATGGCT | + |
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Preference number: 3 (lower is better) Translates to: QIQVSLCRLGWP*SGLFSLSHTMA Trigger: AGCCATAGTATGGCTGAGTGAGAACAGACCACTCCAAGGCCAGCCTAGCCTACACAGGGAAACTTGGATTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| 3UTR TCA 72 bp | TGCCCTCCGTGCTTTGTGAGTCAGTATGAGTTAACATaGAGATGCCAGTACAGGGCCCAGAACACAGTAGGT | + |
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Preference number: 3 (lower is better) Translates to: CPPCFVSQYELT*RCQYRAQNTVG Trigger: ACCTACTGTGTTCTGGGCCCTGTACTGGCATCTTCATGTTAACTCATACTGACTCACAAAGCACGGAGGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| 3UTR TCA 72 bp | GGAAAGAGGCATCCACTTCTCAAAACAGCACACATCTaGGTGGTCGCAGTTTTCCAAGCATCTCACAGACGT | + |
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Preference number: 3 (lower is better) Translates to: GKRHPLLKTAHI*VVAVFQASHRR Trigger: ACGTCTGTGAGATGCTTGGAAAACTGCGACCACTCAGATGTGTGCTGTTTTGAGAAGTGGATGCCTCTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| 3UTR CCA 72 bp | GGCCTTGGAGTGGTCTGTTCTCACTCAGCCATACTATaGCTGGGTTACAAACACATGATATACCTGAGTCCT | + |
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Preference number: 3 (lower is better) Translates to: GLGVVCSHSAIL*LGYKHMIYLSP Trigger: AGGACTCAGGTATATCATGTGTTTGTAACCCAGCCATAGTATGGCTGAGTGAGAACAGACCACTCCAAGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| 3UTR CCA 72 bp | TTTTCTCAAATCCAAGTTTCCCTGTGTAGGCTAGGCTaGCCTTGGAGTGGTCTGTTCTCACTCAGCCATACT | + |
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Preference number: 3 (lower is better) Translates to: FSQIQVSLCRLG*PWSGLFSLSHT Trigger: AGTATGGCTGAGTGAGAACAGACCACTCCAAGGCCAGCCTAGCCTACACAGGGAAACTTGGATTTGAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| 3UTR CCA 72 bp | AGAGGCATCCACTTCTCAAAACAGCACACATCTGAGTaGTCGCAGTTTTCCAAGCATCTCACAGACGTCTGT | + |
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Preference number: 3 (lower is better) Translates to: RGIHFSKQHTSE*SQFSKHLTDVC Trigger: ACAGACGTCTGTGAGATGCTTGGAAAACTGCGACCACTCAGATGTGTGCTGTTTTGAGAAGTGGATGCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| 3UTR-3UTR CAA 90 bp | TGGGAAAGAGGCATCCACTTCTCAAAACAGCACACATCTGAGTGGTCGCAGTTTCTCTTGTTCAACATCTaGAAGGAAACAAGGACTGGA | + |
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Preference number: 3 (lower is better) Translates to: WERGIHFSKQHTSEWSQFLLFNI*KETRTG Trigger: TCCAGTCCTTGTTTCCTTCAAGATGTTGAACAAGAG...AAACTGCGACCACTCAGATGTGTGCTGTTTTGAGAAGTGGATGCCTCTTTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| 3UTR TCA 72 bp | CTGCATCAGCGGACTCTTTTAGCGCTGGCTTTTGGTTaGGATGAGATGGTGAATAAAGCCCAGTTTCTATTG | + |
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Preference number: 3 (lower is better) Translates to: LHQRTLLALAFG*DEMVNKAQFLL Trigger: CAATAGAAACTGGGCTTTATTCACCATCTCATCTCAACCAAAAGCCAGCGCTAAAAGAGTCCGCTGATGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| 3UTR CCA 72 bp | CCAAGAGCTGAATATTTCCAAATCTTGCTCTCTCCCTaGAACTTTGAATCATACCACCTAGGACACTCTCCC | + |
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Preference number: 3 (lower is better) Translates to: PRAEYFQILLSP*NFESYHLGHSP Trigger: GGGAGAGTGTCCTAGGTGGTATGATTCAAAGTTCCAGGGAGAGAGCAAGATTTGGAAATATTCAGCTCTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| 3UTR TCA 72 bp | GAGCTCTCTCTCAATAACCTGTCAGTATTAAACCAATaGGAGCGAGTTACAGCAAGAATAGAGCCATGGTTA | + |
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Preference number: 3 (lower is better) Translates to: ELSLNNLSVLNQ*ERVTARIEPWL Trigger: TAACCATGGCTCTATTCTTGCTGTAACTCGCTCTCATTGGTTTAATACTGACAGGTTATTGAGAGAGAGCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| 3UTR CCA 72 bp | CAAACACATGATATACCTGAGTCCTCCTCTCTTATTTaGGAAGATGAGCTCTCTCTCAATAACCTGTCAGTA | + |
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Preference number: 3 (lower is better) Translates to: QTHDIPESSSLI*EDELSLNNLSV Trigger: TACTGACAGGTTATTGAGAGAGAGCTCATCTTCCCAAATAAGAGAGGAGGACTCAGGTATATCATGTGTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| 3UTR TCA 72 bp | GGACCAACATGTAGTTTTTATGATTACCATCAAAAGTaGAACAAGACCAGCAACCTCTGGGAGGAATCTCAT | + |
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Preference number: 3 (lower is better) Translates to: GPTCSFYDYHQK*NKTSNLWEESH Trigger: ATGAGATTCCTCCCAGAGGTTGCTGGTCTTGTTTCACTTTTGATGGTAATCATAAAAACTACATGTTGGTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| CDS-3UTR GCA 90 bp | TTGAGTTACACCCTGGCCCTACATTGTTTTCTCAAATCCAAGTTTCCCTGTGTAGTGCTCCCCAGCAAGTaGTCCTTACTGGCCTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: LSYTLALHCFLKSKFPCVVLPSK*SLLACL Trigger: CAAGCAGGCCAGTAAGGAGCACTTGCTGGGGAGCAC...TACACAGGGAAACTTGGATTTGAGAAAACAATGTAGGGCCAGGGTGTAACTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| CDS-3UTR GCA 90 bp | TGGGAAAGAGGCATCCACTTCTCAAAACAGCACACATCTGAGTGGTCGCAGTTTCATTGCCTTTTCTTCTaGAGTGCTCCCCAGCAAGTG | + |
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Preference number: 4 (lower is better) Translates to: WERGIHFSKQHTSEWSQFHCLFF*SAPQQV Trigger: CACTTGCTGGGGAGCACTGCAGAAGAAAAGGCAATG...AAACTGCGACCACTCAGATGTGTGCTGTTTTGAGAAGTGGATGCCTCTTTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| 3UTR CAA 72 bp | TGTCTCAGACGTAAAGTAGGCACAAAGGTATGTCTCTaGTTCAACATCTTGAAGGAAACAAGGACTGGAGCG | + |
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Preference number: 4 (lower is better) Translates to: CLRRKVGTKVCL*FNILKETRTGA Trigger: CGCTCCAGTCCTTGTTTCCTTCAAGATGTTGAACAAGAGACATACCTTTGTGCCTACTTTACGTCTGAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| 3UTR CAA 72 bp | AAGTACTCTCTCATTGAGTTACACCCTGGCCCTACATaGTTTTCTCAAATCCAAGTTTCCCTGTGTAGGCTA | + |
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Preference number: 4 (lower is better) Translates to: KYSLIELHPGPT*FSQIQVSLCRL Trigger: TAGCCTACACAGGGAAACTTGGATTTGAGAAAACAATGTAGGGCCAGGGTGTAACTCAATGAGAGAGTACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| 3UTR CAA 72 bp | AGAGGACTCATCCCAAGAGCTGAATATTTCCAAATCTaGCTCTCTCCCTGGAACTTTGAATCATACCACCTA | + |
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Preference number: 4 (lower is better) Translates to: RGLIPRAEYFQI*LSPWNFESYHL Trigger: TAGGTGGTATGATTCAAAGTTCCAGGGAGAGAGCAAGATTTGGAAATATTCAGCTCTTGGGATGAGTCCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| 3UTR CAA 72 bp | TTCCGACTCAATGCAGTCATGTTTAGAAGTGACGTTTaGCTGTGCTCAAAAATCATGAGCTTAATGACAAAA | + |
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Preference number: 4 (lower is better) Translates to: FRLNAVMFRSDV*LCSKIMSLMTK Trigger: TTTTGTCATTAAGCTCATGATTTTTGAGCACAGCAAAACGTCACTTCTAAACATGACTGCATTGAGTCGGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| CDS-3UTR CAA 90 bp | ACATCTGAGTGGTCGCAGTTTTCCAAGCATCTCACAGACGTCTGTCTCAGACGTGACTCGGGCCATTGTTaGTCTGTAGAACTGGAATCT | + |
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Preference number: 5 (lower is better) Translates to: TSEWSQFSKHLTDVCLRRDSGHC*SVELES Trigger: AGATTCCAGTTCTACAGACAAACAATGGCCCGAGTC...ACGTCTGAGACAGACGTCTGTGAGATGCTTGGAAAACTGCGACCACTCAGATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| CDS-3UTR CAA 90 bp | TTGAGTTACACCCTGGCCCTACATTGTTTTCTCAAATCCAAGTTTCCCTGTGTATCCTTACTGGCCTGCTaGACTAGATGGGTGGCGATG | + |
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Preference number: 5 (lower is better) Translates to: LSYTLALHCFLKSKFPCVSLLAC*TRWVAM Trigger: CATCGCCACCCATCTAGTCAAGCAGGCCAGTAAGGA...TACACAGGGAAACTTGGATTTGAGAAAACAATGTAGGGCCAGGGTGTAACTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| CDS TCA 72 bp | CAGTGCTCCCCAGCAAGTGCTCCTTACTGGCCTGCTTaGCTAGATGGGTGGCGATGGTACTCAATCCCATTA | + |
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Preference number: 6 (lower is better) Translates to: QCSPASAPYWPA*LDGWRWYSIPL Trigger: TAATGGGATTGAGTACCATCGCCACCCATCTAGTCAAGCAGGCCAGTAAGGAGCACTTGCTGGGGAGCACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| CDS CAA 72 bp | GTGGCGATGGTACTCAATCCCATTAGACTCGGGCCATaGTTTGTCTGTAGAACTGGAATCTGCCGCTCGCCC | + |
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Preference number: 6 (lower is better) Translates to: VAMVLNPIRLGP*FVCRTGICRSP Trigger: GGGCGAGCGGCAGATTCCAGTTCTACAGACAAACAATGGCCCGAGTCTAATGGGATTGAGTACCATCGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| CDS CAA 90 bp | GATGGGTGGCGATGGTACTCAATCCCATTAGACTCGGGCCATTGTTaGTCTGTAGAACTGGAATCTGCCGCTCGCCCTGAGCACTGTACT | + |
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Preference number: 6 (lower is better) Translates to: DGWRWYSIPLDSGHC*SVELESAARPEHCT Trigger: AGTACAGTGCTCAGGGCGAGCGGCAGATTCCAGTTCTACAGACAAACAATGGCCCGAGTCTAATGGGATTGAGTACCATCGCCACCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| CDS TCA 72 bp | TTGTTTGTCTGTAGAACTGGAATCTGCCGCTCGCCCTaGGCACTGTACTTATTCCCCGGCTTCAGTCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: LFVCRTGICRSP*ALYLFPGFSPR Trigger: TCTGGGACTGAAGCCGGGGAATAAGTACAGTGCTCAGGGCGAGCGGCAGATTCCAGTTCTACAGACAAACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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| CDS CAA 72 bp | CGATGGTACTCAATCCCATTAGACTCGGGCCATTGTTaGTCTGTAGAACTGGAATCTGCCGCTCGCCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: RWYSIPLDSGHC*SVELESAARPE Trigger: CTCAGGGCGAGCGGCAGATTCCAGTTCTACAGACAAACAATGGCCCGAGTCTAATGGGATTGAGTACCATCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001757.9 |
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