Pregenerated sensors for EEF1AKMT4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000115219Ensembl transcript IDs: ENSMUST00000115522.10, ENSMUST00000119224.8
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGAGGACTTGGAGATCACACTTCCAGTCTCACAGCTGAATGGCACTaGGGAAGTCCTCGTTGTCTGAGTCTTGGAGGAAGCAGGGTGAGG | + |
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Preference number: 1 (lower is better) Translates to: GGLGDHTSSLTAEWH*GSPRCLSLGGSRVR Trigger: CCTCACCCTGCTTCCTCCAAGACTCAGACAACGAGGACTTCCTCAGTGCCATTCAGCTGTGAGACTGGAAGTGTGATCTCCAAGTCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119224.8 |
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| 3UTR GCA 90 bp | GTCATTGAGATGAATCGGCCTCCAGGAACTAGCAACCGGCTTACCTaGAAGGCAGACAGAGAAACCATCAGTGCAGAATCATCTCCAGGT | + |
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Preference number: 1 (lower is better) Translates to: VIEMNRPPGTSNRLT*KADRETISAESSPG Trigger: ACCTGGAGATGATTCTGCACTGATGGTTTCTCTGTCTGCCTTGCAGGTAAGCCGGTTGCTAGTTCCTGGAGGCCGATTCATCTCAATGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119224.8 |
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| 3UTR TCA 90 bp | ACCTGGCTCCCACTTCTTCCCTATGTCAAGCTACTATCTAACCATTaGTTGGCCTTTGTGAGCCTTGGTCATTCCAGTCTCCCCTGTTCT | + |
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Preference number: 1 (lower is better) Translates to: TWLPLLPYVKLLSNH*LAFVSLGHSSLPCS Trigger: AGAACAGGGGAGACTGGAATGACCAAGGCTCACAAAGGCCAATCAATGGTTAGATAGTAGCTTGACATAGGGAAGAAGTGGGAGCCAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119224.8 |
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| 3UTR CCA 90 bp | CATGTGTTGAGCTTTGCCCCTAAAGATAAAGTCACATGGAGGAGGTaGGGAAACTCTGTAGAAATAAAAATCCTAGAAGCCAGAAACCTG | + |
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Preference number: 1 (lower is better) Translates to: HVLSFAPKDKVTWRR*GNSVEIKILEARNL Trigger: CAGGTTTCTGGCTTCTAGGATTTTTATTTCTACAGAGTTTCCCCACCTCCTCCATGTGACTTTATCTTTAGGGGCAAAGCTCAACACATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115522.10 |
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| 3UTR TCA 90 bp | GTAAAAGTGGAAATGAAAACCACTGCTATAGGTTGTATGCCTCAGTaGCCAGTCATAACGGGATTGAGCATAGTGTCTGATCCTAAAGTG | + |
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Preference number: 1 (lower is better) Translates to: VKVEMKTTAIGCMPQ*PVITGLSIVSDPKV Trigger: CACTTTAGGATCAGACACTATGCTCAATCCCGTTATGACTGGTCACTGAGGCATACAACCTATAGCAGTGGTTTTCATTTCCACTTTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119224.8 |
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| 3UTR-3UTR CCA 90 bp | CCTAATGCACAAAGGCAGGGAGGACTTGGAGATCACACTTCCAGTCTCACAGCTGGGGATGAGAGGATTTaGGCCCCCAGGGCCAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: PNAQRQGGLGDHTSSLTAGDERI*APRASW Trigger: CCAGCTGGCCCTGGGGGCCCAAATCCTCTCATCCCC...AGCTGTGAGACTGGAAGTGTGATCTCCAAGTCCTCCCTGCCTTTGTGCATTAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119224.8 |
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| 3UTR CAA 90 bp | GAATTCCAACTCCCTAGGAGCCTAATGCACAAAGGCAGGGAGGACTaGGAGATCACACTTCCAGTCTCACAGCTGAATGGCACTGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: EFQLPRSLMHKGRED*EITLPVSQLNGTEE Trigger: TTCCTCAGTGCCATTCAGCTGTGAGACTGGAAGTGTGATCTCCAAGTCCTCCCTGCCTTTGTGCATTAGGCTCCTAGGGAGTTGGAATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119224.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGAGGTGGGGAAACTCTGTAGAAATAAAAATCCTAGAAGCCAGAAACCTGGGTCCCCAGCCCCAAACTaGGAATTCCAACTCCCTAGG | + |
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Preference number: 2 (lower is better) Translates to: EEVGKLCRNKNPRSQKPGSPAPN*EFQLPR Trigger: CCTAGGGAGTTGGAATTCCCAGTTTGGGGCTGGGGA...CCCAGGTTTCTGGCTTCTAGGATTTTTATTTCTACAGAGTTTCCCCACCTCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000115522.10 |
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| 3UTR-3UTR CCA 90 bp | TTCTTTCTGGCTTTCTGTGATAGACTAAGCCACCCTCTGCCTTTGGTTGTTCTATCCCCAGCCCCAAACTaGGAATTCCAACTCCCTAGG | + |
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Preference number: 2 (lower is better) Translates to: FFLAFCDRLSHPLPLVVLSPAPN*EFQLPR Trigger: CCTAGGGAGTTGGAATTCCCAGTTTGGGGCTGGGGA...TAGAACAACCAAAGGCAGAGGGTGGCTTAGTCTATCACAGAAAGCCAGAAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119224.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTTTCTGGCTTTCTGTGATAGACTAAGCCACCCTCTGCCTTTGGTTGTTCTACACTGGTCTGGGACCTaGCTCCCACTTCTTCCCTAT | + |
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Preference number: 2 (lower is better) Translates to: FFLAFCDRLSHPLPLVVLHWSGT*LPLLPY Trigger: ATAGGGAAGAAGTGGGAGCCAGGTCCCAGACCAGTG...TAGAACAACCAAAGGCAGAGGGTGGCTTAGTCTATCACAGAAAGCCAGAAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119224.8 |
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| 3UTR-3UTR TCA 90 bp | TCACACTGTATTGGTTCACATGGGCTTGATCCCACTGGCACTGTTTTATGCACACAAGACCTCTGGATTTaGGTACCCAGCAACCAATCC | + |
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Preference number: 2 (lower is better) Translates to: SHCIGSHGLDPTGTVLCTQDLWI*VPSNQS Trigger: GGATTGGTTGCTGGGTACTCAAATCCAGAGGTCTTG...TGTGCATAAAACAGTGCCAGTGGGATCAAGCCCATGTGAACCAATACAGTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115522.10 ENSMUST00000119224.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGACTCACACTGTATTGGTTCACATGGGCTTGATCCCACTGGCACTGTTTTACAAGACCTCTGGATTTaGGTACCCAGCAACCAATCC | + |
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Preference number: 2 (lower is better) Translates to: LDSHCIGSHGLDPTGTVLQDLWI*VPSNQS Trigger: GGATTGGTTGCTGGGTACTCAAATCCAGAGGTCTTG...TAAAACAGTGCCAGTGGGATCAAGCCCATGTGAACCAATACAGTGTGAGTCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115522.10 ENSMUST00000119224.8 |
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| 3UTR-3UTR GCA 90 bp | TTCCAACTCCCTAGGAGCCTAATGCACAAAGGCAGGGAGGACTTGGAGATCACAACTGGCACTGTTTTATaGACAAGACCTCTGGATTTG | + |
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Preference number: 2 (lower is better) Translates to: FQLPRSLMHKGREDLEITTGTVL*TRPLDL Trigger: CAAATCCAGAGGTCTTGTGCATAAAACAGTGCCAGT...TGTGATCTCCAAGTCCTCCCTGCCTTTGTGCATTAGGCTCCTAGGGAGTTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115522.10 ENSMUST00000119224.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCAACTCCCTAGGAGCCTAATGCACAAAGGCAGGGAGGACTTGGAGATCACAAAAGATAAAGTCACATaGAGGAGGTGGGGAAACTCT | + |
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Preference number: 2 (lower is better) Translates to: FQLPRSLMHKGREDLEITKDKVT*RRWGNS Trigger: AGAGTTTCCCCACCTCCTCCATGTGACTTTATCTTT...TGTGATCTCCAAGTCCTCCCTGCCTTTGTGCATTAGGCTCCTAGGGAGTTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115522.10 |
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| 3UTR CAA 90 bp | AAGCCAGAAACCTGGGATCTGGGATTTAGTTGGACTCACACTGTATaGGTTCACATGGGCTTGATCCCACTGGCACTGTTTTATGCACAA | + |
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Preference number: 2 (lower is better) Translates to: KPETWDLGFSWTHTV*VHMGLIPLALFYAQ Trigger: TTGTGCATAAAACAGTGCCAGTGGGATCAAGCCCATGTGAACCAATACAGTGTGAGTCCAACTAAATCCCAGATCCCAGGTTTCTGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115522.10 |
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| 3UTR-3UTR TCA 90 bp | TTTAGCCTCTTAAGGATTAATGCAGGTTGGATGAGCAGAGGAGCATGTGTTGAGTGGTTCACATGGGCTTaGTCCCACTGGCACTGTTTT | + |
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Preference number: 2 (lower is better) Translates to: FSLLRINAGWMSRGACVEWFTWA*SHWHCF Trigger: AAAACAGTGCCAGTGGGATCAAGCCCATGTGAACCA...CTCAACACATGCTCCTCTGCTCATCCAACCTGCATTAATCCTTAAGAGGCTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115522.10 |
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| 3UTR-3UTR CCA 90 bp | ACTCACACTGTATTGGTTCACATGGGCTTGATCCCACTGGCACTGTTTTATGCAAGGATTAATGCAGGTTaGATGAGCAGAGGAGCATGT | + |
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Preference number: 2 (lower is better) Translates to: THTVLVHMGLIPLALFYARINAG*MSRGAC Trigger: ACATGCTCCTCTGCTCATCCAACCTGCATTAATCCT...TGCATAAAACAGTGCCAGTGGGATCAAGCCCATGTGAACCAATACAGTGTGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115522.10 |
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| 3UTR-3UTR GCA 90 bp | ACTCACACTGTATTGGTTCACATGGGCTTGATCCCACTGGCACTGTTTTATGCAACTGGCACTGTTTTATaGACAAGACCTCTGGATTTG | + |
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Preference number: 2 (lower is better) Translates to: THTVLVHMGLIPLALFYATGTVL*TRPLDL Trigger: CAAATCCAGAGGTCTTGTGCATAAAACAGTGCCAGT...TGCATAAAACAGTGCCAGTGGGATCAAGCCCATGTGAACCAATACAGTGTGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115522.10 ENSMUST00000119224.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCTTATGCATGATGTAAAAGTGGAAATGAAAACCACTGCTATAGGTTGTATGGCCACCCTCTGCCTTTaGTTGTTCTATATAAGGTTG | + |
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Preference number: 2 (lower is better) Translates to: ALMHDVKVEMKTTAIGCMATLCL*LFYIRL Trigger: CAACCTTATATAGAACAACCAAAGGCAGAGGGTGGC...CATACAACCTATAGCAGTGGTTTTCATTTCCACTTTTACATCATGCATAAGGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119224.8 |
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| 3UTR CCA 72 bp | CTGGGGGATGAGAGGATTTGGGCCCCCAGGGCCAGCTaGGACACACTGAGCGCTCTGCCCTTATGCATGATG | + |
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Preference number: 3 (lower is better) Translates to: LGDERIWAPRAS*DTLSALPLCMM Trigger: CATCATGCATAAGGGCAGAGCGCTCAGTGTGTCCCAGCTGGCCCTGGGGGCCCAAATCCTCTCATCCCCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000119224.8 |
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| 3UTR TCA 72 bp | GGAGATCACACTTCCAGTCTCACAGCTGAATGGCACTaGGGAAGTCCTCGTTGTCTGAGTCTTGGAGGAAGC | + |
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Preference number: 3 (lower is better) Translates to: GDHTSSLTAEWH*GSPRCLSLGGS Trigger: GCTTCCTCCAAGACTCAGACAACGAGGACTTCCTCAGTGCCATTCAGCTGTGAGACTGGAAGTGTGATCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119224.8 |
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| 3UTR GCA 72 bp | CCGGCTTACCTGCAAGGCAGACAGAGAAACCATCAGTaGAGAATCATCTCCAGGTCCTCAAAGGTCAGTACA | + |
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Preference number: 3 (lower is better) Translates to: PAYLQGRQRNHQ*RIISRSSKVST Trigger: TGTACTGACCTTTGAGGACCTGGAGATGATTCTGCACTGATGGTTTCTCTGTCTGCCTTGCAGGTAAGCCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119224.8 |
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| 3UTR GCA 72 bp | GGTTCACATGGGCTTGATCCCACTGGCACTGTTTTATaGACAAGACCTCTGGATTTGAGTACCCAGCAACCA | + |
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Preference number: 3 (lower is better) Translates to: GSHGLDPTGTVL*TRPLDLSTQQP Trigger: TGGTTGCTGGGTACTCAAATCCAGAGGTCTTGTGCATAAAACAGTGCCAGTGGGATCAAGCCCATGTGAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115522.10 ENSMUST00000119224.8 |
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| 3UTR-3UTR CAA 90 bp | AAGGCAGACAGAGAAACCATCAGTGCAGAATCATCTCCAGGTCCTCAAAGGTCATGGACTCACACTGTATaGGTTCACATGGGCTTGATC | + |
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Preference number: 3 (lower is better) Translates to: KADRETISAESSPGPQRSWTHTV*VHMGLI Trigger: GATCAAGCCCATGTGAACCAATACAGTGTGAGTCCA...TGACCTTTGAGGACCTGGAGATGATTCTGCACTGATGGTTTCTCTGTCTGCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119224.8 |
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| 3UTR-3UTR CAA 90 bp | TTCTTTCTGGCTTTCTGTGATAGACTAAGCCACCCTCTGCCTTTGGTTGTTCTATTGGTTCACATGGGCTaGATCCCACTGGCACTGTTT | + |
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Preference number: 3 (lower is better) Translates to: FFLAFCDRLSHPLPLVVLLVHMG*IPLALF Trigger: AAACAGTGCCAGTGGGATCAAGCCCATGTGAACCAA...TAGAACAACCAAAGGCAGAGGGTGGCTTAGTCTATCACAGAAAGCCAGAAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119224.8 |
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| 3UTR-3UTR CAA 90 bp | ATGGAGGAGGTGGGGAAACTCTGTAGAAATAAAAATCCTAGAAGCCAGAAACCTTTGGTTCACATGGGCTaGATCCCACTGGCACTGTTT | + |
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Preference number: 3 (lower is better) Translates to: MEEVGKLCRNKNPRSQKPLVHMG*IPLALF Trigger: AAACAGTGCCAGTGGGATCAAGCCCATGTGAACCAA...AGGTTTCTGGCTTCTAGGATTTTTATTTCTACAGAGTTTCCCCACCTCCTCCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115522.10 |
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| 3UTR TCA 72 bp | TTAGTTGGACTCACACTGTATTGGTTCACATGGGCTTaGTCCCACTGGCACTGTTTTATGCACAAGACCTCT | + |
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Preference number: 3 (lower is better) Translates to: LVGLTLYWFTWA*SHWHCFMHKTS Trigger: AGAGGTCTTGTGCATAAAACAGTGCCAGTGGGATCAAGCCCATGTGAACCAATACAGTGTGAGTCCAACTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115522.10 ENSMUST00000119224.8 |
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| 3UTR-3UTR CAA 90 bp | ATGGAGGAGGTGGGGAAACTCTGTAGAAATAAAAATCCTAGAAGCCAGAAACCTTGGACTCACACTGTATaGGTTCACATGGGCTTGATC | + |
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Preference number: 3 (lower is better) Translates to: MEEVGKLCRNKNPRSQKPWTHTV*VHMGLI Trigger: GATCAAGCCCATGTGAACCAATACAGTGTGAGTCCA...AGGTTTCTGGCTTCTAGGATTTTTATTTCTACAGAGTTTCCCCACCTCCTCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115522.10 |
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| 3UTR TCA 72 bp | GAAATGAAAACCACTGCTATAGGTTGTATGCCTCAGTaGCCAGTCATAACGGGATTGAGCATAGTGTCTGAT | + |
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Preference number: 3 (lower is better) Translates to: EMKTTAIGCMPQ*PVITGLSIVSD Trigger: ATCAGACACTATGCTCAATCCCGTTATGACTGGTCACTGAGGCATACAACCTATAGCAGTGGTTTTCATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119224.8 |
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| 3UTR CCA 72 bp | AGAAATAAAAATCCTAGAAGCCAGAAACCTGGGATCTaGGATTTAGTTGGACTCACACTGTATTGGTTCACA | + |
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Preference number: 3 (lower is better) Translates to: RNKNPRSQKPGI*DLVGLTLYWFT Trigger: TGTGAACCAATACAGTGTGAGTCCAACTAAATCCCAGATCCCAGGTTTCTGGCTTCTAGGATTTTTATTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115522.10 |
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| CDS-3UTR TCA 90 bp | GAGGAGGTGGGGAAACTCTGTAGAAATAAAAATCCTAGAAGCCAGAAACCTGGGAGGAGGGCTGGGGGATaGGAGGATTTGGGCCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: EEVGKLCRNKNPRSQKPGRRAGG*EDLGPQ Trigger: CTGGGGGCCCAAATCCTCTCATCCCCCAGCCCTCCT...CCCAGGTTTCTGGCTTCTAGGATTTTTATTTCTACAGAGTTTCCCCACCTCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000115522.10 |
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| CDS-3UTR CCA 90 bp | TCACACTGTATTGGTTCACATGGGCTTGATCCCACTGGCACTGTTTTATGCACAGGGGATGAGAGGATTTaGGCCCCCAGGGCCAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SHCIGSHGLDPTGTVLCTGDERI*APRASW Trigger: CCAGCTGGCCCTGGGGGCCCAAATCCTCTCATCCCC...TGTGCATAAAACAGTGCCAGTGGGATCAAGCCCATGTGAACCAATACAGTGTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115522.10 |
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| 3UTR CAA 72 bp | CTCCCTAGGAGCCTAATGCACAAAGGCAGGGAGGACTaGGAGATCACACTTCCAGTCTCACAGCTGAATGGC | + |
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Preference number: 4 (lower is better) Translates to: LPRSLMHKGRED*EITLPVSQLNG Trigger: GCCATTCAGCTGTGAGACTGGAAGTGTGATCTCCAAGTCCTCCCTGCCTTTGTGCATTAGGCTCCTAGGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119224.8 |
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| CDS-3UTR TCA 90 bp | GATCTGGGATTTAGTTGGACTCACACTGTATTGGTTCACATGGGCTTGATCCCACCAGCTGGGACACACTaGGCGCTCTGCCCTTATGCA | + |
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Preference number: 4 (lower is better) Translates to: DLGFSWTHTVLVHMGLIPPAGTH*ALCPYA Trigger: TGCATAAGGGCAGAGCGCTCAGTGTGTCCCAGCTGG...TGGGATCAAGCCCATGTGAACCAATACAGTGTGAGTCCAACTAAATCCCAGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115522.10 |
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| CDS-3UTR CCA 90 bp | TTCCAACTCCCTAGGAGCCTAATGCACAAAGGCAGGGAGGACTTGGAGATCACATCGTTGTCTGAGTCTTaGAGGAAGCAGGGTGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: FQLPRSLMHKGREDLEITSLSES*RKQGEA Trigger: TGCCTCACCCTGCTTCCTCCAAGACTCAGACAACGA...TGTGATCTCCAAGTCCTCCCTGCCTTTGTGCATTAGGCTCCTAGGGAGTTGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115522.10 |
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| CDS-3UTR CCA 90 bp | CCTGCAAGGCAGACAGAGAAACCATCAGTGCAGAATCATCTCCAGGTCCTCAAAGGCTGCCACCACTACTaGAGAGTAATCCACACTGGT | + |
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Preference number: 4 (lower is better) Translates to: PARQTEKPSVQNHLQVLKGCHHY*RVIHTG Trigger: ACCAGTGTGGATTACTCTCCAGTAGTGGTGGCAGCC...TTTGAGGACCTGGAGATGATTCTGCACTGATGGTTTCTCTGTCTGCCTTGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119224.8 |
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| CDS-3UTR CCA 90 bp | GAGGAGGTGGGGAAACTCTGTAGAAATAAAAATCCTAGAAGCCAGAAACCTGGGGCTCCCCAGCCAGCATaGCATCCAGAGTACCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: EEVGKLCRNKNPRSQKPGAPQPA*HPEYPS Trigger: AGAAGGGTACTCTGGATGCCATGCTGGCTGGGGAGC...CCCAGGTTTCTGGCTTCTAGGATTTTTATTTCTACAGAGTTTCCCCACCTCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000115522.10 |
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| CDS-3UTR CCA 90 bp | TCACACTGTATTGGTTCACATGGGCTTGATCCCACTGGCACTGTTTTATGCACATACATTCCAGGGATCTaGCTCCCCAGCCAGCATGGC | + |
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Preference number: 4 (lower is better) Translates to: SHCIGSHGLDPTGTVLCTYIPGI*LPSQHG Trigger: GCCATGCTGGCTGGGGAGCCAGATCCCTGGAATGTA...TGTGCATAAAACAGTGCCAGTGGGATCAAGCCCATGTGAACCAATACAGTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115522.10 ENSMUST00000119224.8 |
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| CDS-3UTR GCA 90 bp | ACTCACACTGTATTGGTTCACATGGGCTTGATCCCACTGGCACTGTTTTATGCAGGTCTGCTGTCTTGCTaGTTCCTCACCTCACTCAGC | + |
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Preference number: 4 (lower is better) Translates to: THTVLVHMGLIPLALFYAGLLSC*FLTSLS Trigger: GCTGAGTGAGGTGAGGAAGCAGCAAGACAGCAGACC...TGCATAAAACAGTGCCAGTGGGATCAAGCCCATGTGAACCAATACAGTGTGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119224.8 |
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| CDS-3UTR CCA 90 bp | CTCTTAAGGATTAATGCAGGTTGGATGAGCAGAGGAGCATGTGTTGAGCTTTGCACCTCACTCAGCACCTaGTCCACAGTGTGGACACCT | + |
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Preference number: 4 (lower is better) Translates to: LLRINAGWMSRGACVELCTSLST*STVWTP Trigger: AGGTGTCCACACTGTGGACCAGGTGCTGAGTGAGGT...GCAAAGCTCAACACATGCTCCTCTGCTCATCCAACCTGCATTAATCCTTAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115522.10 |
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| CDS-3UTR GCA 90 bp | GTTCACATGGGCTTGATCCCACTGGCACTGTTTTATGCACAAGACCTCTGGATTACTAGGGAAGTCCAGTaGTCGAACATCCATGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: VHMGLIPLALFYAQDLWITREVQ*SNIHGL Trigger: GAGACCATGGATGTTCGAGCACTGGACTTCCCTAGT...AATCCAGAGGTCTTGTGCATAAAACAGTGCCAGTGGGATCAAGCCCATGTGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115522.10 ENSMUST00000119224.8 |
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| CDS-3UTR GCA 90 bp | GACAGGGAAGACATTCATCCAGGAGACACTGCTTTCCTATCAACTACTCACTTTTCAACCCCTTCTCCCTaGAGGCATCTTGGTCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: DREDIHPGDTAFLSTTHFSTPSP*RHLGLL Trigger: CAGCAGACCAAGATGCCTGCAGGGAGAAGGGGTTGA...AAAGTGAGTAGTTGATAGGAAAGCAGTGTCTCCTGGATGAATGTCTTCCCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119224.8 |
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| CDS-3UTR CCA 90 bp | TTGGACTCACACTGTATTGGTTCACATGGGCTTGATCCCACTGGCACTGTTTTACATAGCGAACTTGCATaGCTGCCACCACTACTGGAG | + |
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Preference number: 4 (lower is better) Translates to: LDSHCIGSHGLDPTGTVLHSELA*LPPLLE Trigger: CTCCAGTAGTGGTGGCAGCCATGCAAGTTCGCTATG...TAAAACAGTGCCAGTGGGATCAAGCCCATGTGAACCAATACAGTGTGAGTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115522.10 ENSMUST00000119224.8 |
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| CDS-3UTR CCA 90 bp | CTTTGGTTGTTCTATATAAGGTTGGGTTCTAGACAGGGAAGACATTCATCCAGGTACATTCCAGGGATCTaGCTCCCCAGCCAGCATGGC | + |
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Preference number: 4 (lower is better) Translates to: LWLFYIRLGSRQGRHSSRYIPGI*LPSQHG Trigger: GCCATGCTGGCTGGGGAGCCAGATCCCTGGAATGTA...CCTGGATGAATGTCTTCCCTGTCTAGAACCCAACCTTATATAGAACAACCAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119224.8 |
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| CDS-3UTR CCA 90 bp | TTGGTTCACATGGGCTTGATCCCACTGGCACTGTTTTATGCACAAGACCTCTGGACCTGGTCCACAGTGTaGACACCTTCAGAAGATACA | + |
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Preference number: 4 (lower is better) Translates to: LVHMGLIPLALFYAQDLWTWSTV*TPSEDT Trigger: TGTATCTTCTGAAGGTGTCCACACTGTGGACCAGGT...CCAGAGGTCTTGTGCATAAAACAGTGCCAGTGGGATCAAGCCCATGTGAACCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115522.10 ENSMUST00000119224.8 |
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| 3UTR CAA 72 bp | ACCTGGGATCTGGGATTTAGTTGGACTCACACTGTATaGGTTCACATGGGCTTGATCCCACTGGCACTGTTT | + |
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Preference number: 4 (lower is better) Translates to: TWDLGFSWTHTV*VHMGLIPLALF Trigger: AAACAGTGCCAGTGGGATCAAGCCCATGTGAACCAATACAGTGTGAGTCCAACTAAATCCCAGATCCCAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115522.10 |
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| CDS-3UTR TCA 90 bp | TTTAGCCTCTTAAGGATTAATGCAGGTTGGATGAGCAGAGGAGCATGTGTTGAGACAGCTGAATGGCACTaGGGAAGTCCTCGTTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: FSLLRINAGWMSRGACVETAEWH*GSPRCL Trigger: CAGACAACGAGGACTTCCTCAGTGCCATTCAGCTGT...CTCAACACATGCTCCTCTGCTCATCCAACCTGCATTAATCCTTAAGAGGCTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115522.10 |
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| CDS-3UTR GCA 90 bp | TTCTGTGATAGACTAAGCCACCCTCTGCCTTTGGTTGTTCTATATAAGGTTGGGCTTGGTCTGCTGTCTTaGTGCTTCCTCACCTCACTC | + |
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Preference number: 4 (lower is better) Translates to: FCDRLSHPLPLVVLYKVGLGLLS*CFLTSL Trigger: GAGTGAGGTGAGGAAGCAGCAAGACAGCAGACCAAG...CCCAACCTTATATAGAACAACCAAAGGCAGAGGGTGGCTTAGTCTATCACAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119224.8 |
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| CDS-3UTR CCA 90 bp | TGGAGGAGGTGGGGAAACTCTGTAGAAATAAAAATCCTAGAAGCCAGAAACCTGGGCTGCCACCACTACTaGAGAGTAATCCACACTGGT | + |
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Preference number: 4 (lower is better) Translates to: WRRWGNSVEIKILEARNLGCHHY*RVIHTG Trigger: ACCAGTGTGGATTACTCTCCAGTAGTGGTGGCAGCC...CAGGTTTCTGGCTTCTAGGATTTTTATTTCTACAGAGTTTCCCCACCTCCTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115522.10 |
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| CDS-3UTR CCA 90 bp | GACAGGGAAGACATTCATCCAGGAGACACTGCTTTCCTATCAACTACTCACTTTCATAGCGAACTTGCATaGCTGCCACCACTACTGGAG | + |
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Preference number: 4 (lower is better) Translates to: DREDIHPGDTAFLSTTHFHSELA*LPPLLE Trigger: CTCCAGTAGTGGTGGCAGCCATGCAAGTTCGCTATG...AAAGTGAGTAGTTGATAGGAAAGCAGTGTCTCCTGGATGAATGTCTTCCCTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119224.8 |
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| CDS-3UTR GCA 90 bp | TTCTTTCTGGCTTTCTGTGATAGACTAAGCCACCCTCTGCCTTTGGTTGTTCTAACTAGGGAAGTCCAGTaGTCGAACATCCATGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: FFLAFCDRLSHPLPLVVLTREVQ*SNIHGL Trigger: GAGACCATGGATGTTCGAGCACTGGACTTCCCTAGT...TAGAACAACCAAAGGCAGAGGGTGGCTTAGTCTATCACAGAAAGCCAGAAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119224.8 |
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| CDS-3UTR CCA 90 bp | TGGGATCTGGGATTTAGTTGGACTCACACTGTATTGGTTCACATGGGCTTGATCACCTGGTCCACAGTGTaGACACCTTCAGAAGATACA | + |
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Preference number: 4 (lower is better) Translates to: WDLGFSWTHTVLVHMGLITWSTV*TPSEDT Trigger: TGTATCTTCTGAAGGTGTCCACACTGTGGACCAGGT...GATCAAGCCCATGTGAACCAATACAGTGTGAGTCCAACTAAATCCCAGATCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115522.10 ENSMUST00000119224.8 |
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| CDS-3UTR CCA 90 bp | ATTGGTTCACATGGGCTTGATCCCACTGGCACTGTTTTATGCACAAGACCTCTGTGTCTGATCCTAAAGTaGGGACCTGCAGAAGTCATT | + |
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Preference number: 4 (lower is better) Translates to: IGSHGLDPTGTVLCTRPLCLILK*GPAEVI Trigger: AATGACTTCTGCAGGTCCCCACTTTAGGATCAGACA...CAGAGGTCTTGTGCATAAAACAGTGCCAGTGGGATCAAGCCCATGTGAACCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115522.10 |
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| CDS-3UTR GCA 90 bp | TTGGTTCACATGGGCTTGATCCCACTGGCACTGTTTTATGCACAAGACCTCTGGGGAAATGAAAACCACTaGTATAGGTTGTATGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: LVHMGLIPLALFYAQDLWGNENH*YRLYAS Trigger: TGAGGCATACAACCTATAGCAGTGGTTTTCATTTCC...CCAGAGGTCTTGTGCATAAAACAGTGCCAGTGGGATCAAGCCCATGTGAACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115522.10 |
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| CDS-3UTR CCA 90 bp | GCCCTTATGCATGATGTAAAAGTGGAAATGAAAACCACTGCTATAGGTTGTATGACCTCACTCAGCACCTaGTCCACAGTGTGGACACCT | + |
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Preference number: 4 (lower is better) Translates to: ALMHDVKVEMKTTAIGCMTSLST*STVWTP Trigger: AGGTGTCCACACTGTGGACCAGGTGCTGAGTGAGGT...CATACAACCTATAGCAGTGGTTTTCATTTCCACTTTTACATCATGCATAAGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119224.8 |
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| CDS-3UTR TCA 90 bp | TGGAGGAGGTGGGGAAACTCTGTAGAAATAAAAATCCTAGAAGCCAGAAACCTGCTCTGCCCTTATGCATaGTGTAAAAGTGGAAATGAA | + |
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Preference number: 4 (lower is better) Translates to: WRRWGNSVEIKILEARNLLCPYA*CKSGNE Trigger: TTCATTTCCACTTTTACATCATGCATAAGGGCAGAG...CAGGTTTCTGGCTTCTAGGATTTTTATTTCTACAGAGTTTCCCCACCTCCTCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115522.10 |
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| CDS-3UTR TCA 90 bp | GCCTTTGTGAGCCTTGGTCATTCCAGTCTCCCCTGTTCTTTAGAAATCCATACTCCAAACCTCATTTTCTaGTTGCTGAATTTGTCCAAT | + |
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Preference number: 4 (lower is better) Translates to: AFVSLGHSSLPCSLEIHTPNLIF*LLNLSN Trigger: ATTGGACAAATTCAGCAATCAGAAAATGAGGTTTGG...AGTATGGATTTCTAAAGAACAGGGGAGACTGGAATGACCAAGGCTCACAAAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119224.8 |
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| CDS CCA 90 bp | CTGGTCCACAGTGTGGACACCTTCAGAAGATACATTCCAGGGATCTaGCTCCCCAGCCAGCATGGCATCCAGAGTACCCTTCTCGAGGAC | + |
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Preference number: 5 (lower is better) Translates to: LVHSVDTFRRYIPGI*LPSQHGIQSTLLED Trigger: GTCCTCGAGAAGGGTACTCTGGATGCCATGCTGGCTGGGGAGCCAGATCCCTGGAATGTATCTTCTGAAGGTGTCCACACTGTGGACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115522.10 ENSMUST00000119224.8 |
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| CDS CCA 90 bp | GGAACTAGCAACCGGCTTACCTCACTCAGCACCTGGTCCACAGTGTaGACACCTTCAGAAGATACATTCCAGGGATCTGGCTCCCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: GTSNRLTSLSTWSTV*TPSEDTFQGSGSPA Trigger: GGCTGGGGAGCCAGATCCCTGGAATGTATCTTCTGAAGGTGTCCACACTGTGGACCAGGTGCTGAGTGAGGTAAGCCGGTTGCTAGTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115522.10 |
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| CDS CCA 90 bp | CTGTCTTGCTGCTTCCTCACCTCACTCAGCACCTGGTCCACAGTGTaGACACCTTCAGAAGATACATTCCAGGGATCTGGCTCCCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: LSCCFLTSLSTWSTV*TPSEDTFQGSGSPA Trigger: GGCTGGGGAGCCAGATCCCTGGAATGTATCTTCTGAAGGTGTCCACACTGTGGACCAGGTGCTGAGTGAGGTGAGGAAGCAGCAAGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119224.8 |
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| CDS GCA 90 bp | CAATGTCTGAGAGTTCAACCCCTTCTCCCTGCAGGCATCTTGGTCTaGTGTCTTGCTGCTTCCTCACCTCACTCAGCACCTGGTCCACAG | + |
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Preference number: 5 (lower is better) Translates to: QCLRVQPLLPAGILV*CLAASSPHSAPGPQ Trigger: CTGTGGACCAGGTGCTGAGTGAGGTGAGGAAGCAGCAAGACAGCAGACCAAGATGCCTGCAGGGAGAAGGGGTTGAACTCTCAGACATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119224.8 |
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| CDS CCA 90 bp | CACCTTCAGAAGATACATTCCAGGGATCTGGCTCCCCAGCCAGCATaGCATCCAGAGTACCCTTCTCGAGGACAACATCAAAAGACCCAC | + |
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Preference number: 5 (lower is better) Translates to: HLQKIHSRDLAPQPA*HPEYPSRGQHQKTH Trigger: GTGGGTCTTTTGATGTTGTCCTCGAGAAGGGTACTCTGGATGCCATGCTGGCTGGGGAGCCAGATCCCTGGAATGTATCTTCTGAAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115522.10 ENSMUST00000119224.8 |
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| CDS CCA 90 bp | AATCGGCCTCCAGGAACTAGCAACCGGCTTACCTCACTCAGCACCTaGTCCACAGTGTGGACACCTTCAGAAGATACATTCCAGGGATCT | + |
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Preference number: 5 (lower is better) Translates to: NRPPGTSNRLTSLST*STVWTPSEDTFQGS Trigger: AGATCCCTGGAATGTATCTTCTGAAGGTGTCCACACTGTGGACCAGGTGCTGAGTGAGGTAAGCCGGTTGCTAGTTCCTGGAGGCCGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115522.10 |
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| CDS CCA 90 bp | ACTGGGTACATGGGCATAGCGAACTTGCATGGCTGCCACCACTACTaGAGAGTAATCCACACTGGTCACATTAGGGAAGCCTCCAAGGAA | + |
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Preference number: 5 (lower is better) Translates to: TGYMGIANLHGCHHY*RVIHTGHIREASKE Trigger: TTCCTTGGAGGCTTCCCTAATGTGACCAGTGTGGATTACTCTCCAGTAGTGGTGGCAGCCATGCAAGTTCGCTATGCCCATGTACCCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115522.10 ENSMUST00000119224.8 |
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| CDS CCA 90 bp | CATCTTGGTCTGCTGTCTTGCTGCTTCCTCACCTCACTCAGCACCTaGTCCACAGTGTGGACACCTTCAGAAGATACATTCCAGGGATCT | + |
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Preference number: 5 (lower is better) Translates to: HLGLLSCCFLTSLST*STVWTPSEDTFQGS Trigger: AGATCCCTGGAATGTATCTTCTGAAGGTGTCCACACTGTGGACCAGGTGCTGAGTGAGGTGAGGAAGCAGCAAGACAGCAGACCAAGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119224.8 |
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| CDS-3UTR CAA 90 bp | AAGGCAGACAGAGAAACCATCAGTGCAGAATCATCTCCAGGTCCTCAAAGGTCACTCCCTGCAGGCATCTaGGTCTGCTGTCTTGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: KADRETISAESSPGPQRSLPAGI*VCCLAA Trigger: AGCAGCAAGACAGCAGACCAAGATGCCTGCAGGGAG...TGACCTTTGAGGACCTGGAGATGATTCTGCACTGATGGTTTCTCTGTCTGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119224.8 |
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| CDS CCA 72 bp | CCAGTGCTCGAACATCCATGGTCTCCCAGCGTAGACTaGGTACATGGGCATAGCGAACTTGCATGGCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: PVLEHPWSPSVD*VHGHSELAWLP Trigger: TGGCAGCCATGCAAGTTCGCTATGCCCATGTACCCAGTCTACGCTGGGAGACCATGGATGTTCGAGCACTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115522.10 ENSMUST00000119224.8 |
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| CDS CCA 72 bp | ATGGGCATAGCGAACTTGCATGGCTGCCACCACTACTaGAGAGTAATCCACACTGGTCACATTAGGGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: MGIANLHGCHHY*RVIHTGHIREA Trigger: GGCTTCCCTAATGTGACCAGTGTGGATTACTCTCCAGTAGTGGTGGCAGCCATGCAAGTTCGCTATGCCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115522.10 ENSMUST00000119224.8 |
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| CDS CCA 72 bp | AAGATACATTCCAGGGATCTGGCTCCCCAGCCAGCATaGCATCCAGAGTACCCTTCTCGAGGACAACATCAA | + |
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Preference number: 6 (lower is better) Translates to: KIHSRDLAPQPA*HPEYPSRGQHQ Trigger: TTGATGTTGTCCTCGAGAAGGGTACTCTGGATGCCATGCTGGCTGGGGAGCCAGATCCCTGGAATGTATCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115522.10 ENSMUST00000119224.8 |
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