Pregenerated sensors for EEF1AKMT3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000080115Ensembl transcript IDs: ENSMUST00000116231.4
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAAAGCTCCTGGGGTTCTGCCATTCCTAACAAGCAGCCACCCTTCTaGATCTTCCCAAGAGTAGTTAAGGGAACCGAAGGGAAGAGGGAA | + |
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Preference number: 1 (lower is better) Translates to: QSSWGSAIPNKQPPF*IFPRVVKGTEGKRE Trigger: TTCCCTCTTCCCTTCGGTTCCCTTAACTACTCTTGGGAAGATGCAGAAGGGTGGCTGCTTGTTAGGAATGGCAGAACCCCAGGAGCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| 3UTR GCA 90 bp | ACACACACACACACACGGCAGGTAAGTAGGGTGGGCTCAGGAAATTaGCCAAGGTCACCTGGAGAAGCAGAGTTCCTTCAACAAACCCAA | + |
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Preference number: 1 (lower is better) Translates to: THTHTRQVSRVGSGN*PRSPGEAEFLQQTQ Trigger: TTGGGTTTGTTGAAGGAACTCTGCTTCTCCAGGTGACCTTGGGCAATTTCCTGAGCCCACCCTACTTACCTGCCGTGTGTGTGTGTGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| 3UTR TCA 90 bp | ATCCCAGCAAACACATGGTGGCTCACAACCATCCACAACAAGATCTaGCTCCCTCTTCTGGAGTGTCTGAAGGCAGCTACAGTGTACTTA | + |
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Preference number: 1 (lower is better) Translates to: IPANTWWLTTIHNKI*LPLLECLKAATVYL Trigger: TAAGTACACTGTAGCTGCCTTCAGACACTCCAGAAGAGGGAGTCAGATCTTGTTGTGGATGGTTGTGAGCCACCATGTGTTTGCTGGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| 3UTR TCA 90 bp | GAACCCAATCCAGAATGTGATCACATGATGCCTGTGATCAGGTCTTaGGCTTTGCAAAGGATGAAGAAGCTACAGACCAACGGGACATCT | + |
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Preference number: 1 (lower is better) Translates to: EPNPECDHMMPVIRS*ALQRMKKLQTNGTS Trigger: AGATGTCCCGTTGGTCTGTAGCTTCTTCATCCTTTGCAAAGCTCAAGACCTGATCACAGGCATCATGTGATCACATTCTGGATTGGGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| 3UTR CCA 90 bp | CCCCCTATTGAGACTCTTATTTCAACAAGCAAGAGACAGACATTCTaGAGTATCTTGGCATCCAGCTTTCTGGCAATGTTTAGAGATACA | + |
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Preference number: 1 (lower is better) Translates to: PPIETLISTSKRQTF*SILASSFLAMFRDT Trigger: TGTATCTCTAAACATTGCCAGAAAGCTGGATGCCAAGATACTCCAGAATGTCTGTCTCTTGCTTGTTGAAATAAGAGTCTCAATAGGGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| 3UTR TCA 90 bp | CAAAGAGTTTTAAAGAGTCCATGCTATGTAAAGAAGTGTAAGTGGTaGTCTCTCTGCAGGGACTGTTCATGCCATTTAGTCCTAACTATC | + |
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Preference number: 1 (lower is better) Translates to: QRVLKSPCYVKKCKW*SLCRDCSCHLVLTI Trigger: GATAGTTAGGACTAAATGGCATGAACAGTCCCTGCAGAGAGATCACCACTTACACTTCTTTACATAGCATGGACTCTTTAAAACTCTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| 3UTR TCA 90 bp | ACCTGGAGAAGCAGAGTTCCTTCAACAAACCCAATAAATAATTGCTaGATTAGTAAAATATCTACTGAACATATGTGTGCCCGGAGCTGT | + |
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Preference number: 1 (lower is better) Translates to: TWRSRVPSTNPINNC*ISKISTEHMCARSC Trigger: ACAGCTCCGGGCACACATATGTTCAGTAGATATTTTACTAATTCAGCAATTATTTATTGGGTTTGTTGAAGGAACTCTGCTTCTCCAGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| 3UTR-3UTR GCA 90 bp | ATTCTCCTCCTGGGGCTCAGGTCTAGGAAGACTCCCCCTATTGAGACTCTTATTGCGGCTCTGGAGGGATaGCATTCCTCCACTGAGACA | + |
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Preference number: 2 (lower is better) Translates to: ILLLGLRSRKTPPIETLIAALEG*HSSTET Trigger: TGTCTCAGTGGAGGAATGGCATCCCTCCAGAGCCGC...AATAAGAGTCTCAATAGGGGGAGTCTTCCTAGACCTGAGCCCCAGGAGGAGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| 3UTR-3UTR TCA 90 bp | CAGAAGCAAAGCATAAGTGTAGACAGAGAGCAATGGCCCTTCCTGGAAGGGATCCAGGTGTGTGTGGCCTaGGTACCAAGCAAAGACGTT | + |
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Preference number: 2 (lower is better) Translates to: QKQSISVDREQWPFLEGIQVCVA*VPSKDV Trigger: AACGTCTTTGCTTGGTACTCAGGCCACACACACCTG...GATCCCTTCCAGGAAGGGCCATTGCTCTCTGTCTACACTTATGCTTTGCTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| 3UTR-3UTR CCA 90 bp | AAGAACCGAAGGCAAAACAAGAAGGAAAACCTGACGTGGAAGGAAGAACTAGAGTGGTGTTCGCGGCTCTaGAGGGATGCCATTCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: KNRRQNKKENLTWKEELEWCSRL*RDAIPP Trigger: TGGAGGAATGGCATCCCTCCAGAGCCGCGAACACCA...CTCTAGTTCTTCCTTCCACGTCAGGTTTTCCTTCTTGTTTTGCCTTCGGTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| 3UTR-3UTR CCA 90 bp | GTAAGTAGGGTGGGCTCAGGAAATTGCCCAAGGTCACCTGGAGAAGCAGAGTTCCATTCTGGAGTATCTTaGCATCCAGCTTTCTGGCAA | + |
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Preference number: 2 (lower is better) Translates to: VSRVGSGNCPRSPGEAEFHSGVS*HPAFWQ Trigger: TTGCCAGAAAGCTGGATGCCAAGATACTCCAGAATG...GAACTCTGCTTCTCCAGGTGACCTTGGGCAATTTCCTGAGCCCACCCTACTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| 3UTR-3UTR TCA 90 bp | GGCGTGGCATCTAGGTTAAGAGAACAGTGGCAGACACATCAAAGATGGTTGTGTCTCTTCTGGAGTGTCTaGAGGCAGCTACAGTGTACT | + |
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Preference number: 2 (lower is better) Translates to: GVASRLREQWQTHQRWLCLFWSV*RQLQCT Trigger: AGTACACTGTAGCTGCCTTCAGACACTCCAGAAGAG...ACACAACCATCTTTGATGTGTCTGCCACTGTTCTCTTAACCTAGATGCCACGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| 3UTR-3UTR TCA 90 bp | AAGAACCGAAGGCAAAACAAGAAGGAAAACCTGACGTGGAAGGAAGAACTAGAGGCAAAGATGGGCTGGTaGGATGGCTCAGTGGGTAAG | + |
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Preference number: 2 (lower is better) Translates to: KNRRQNKKENLTWKEELEAKMGW*DGSVGK Trigger: CTTACCCACTGAGCCATCTCACCAGCCCATCTTTGC...CTCTAGTTCTTCCTTCCACGTCAGGTTTTCCTTCTTGTTTTGCCTTCGGTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| 3UTR-3UTR TCA 90 bp | GAAAAGTGGAGAGGCCAGGGAATGCCCATAGAGTTAGGGAACAAAGCGTTAAGAAAGATGGCAAGAGCTTaGGGCGTGGCATCTAGGTTA | + |
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Preference number: 2 (lower is better) Translates to: EKWRGQGMPIELGNKALRKMARA*GVASRL Trigger: TAACCTAGATGCCACGCCTCAAGCTCTTGCCATCTT...TCTTAACGCTTTGTTCCCTAACTCTATGGGCATTCCCTGGCCTCTCCACTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| 3UTR-3UTR TCA 90 bp | GAAAAGTGGAGAGGCCAGGGAATGCCCATAGAGTTAGGGAACAAAGCGTTAAGAAAGAAGTGTAAGTGGTaGTCTCTCTGCAGGGACTGT | + |
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Preference number: 2 (lower is better) Translates to: EKWRGQGMPIELGNKALRKKCKW*SLCRDC Trigger: ACAGTCCCTGCAGAGAGATCACCACTTACACTTCTT...TCTTAACGCTTTGTTCCCTAACTCTATGGGCATTCCCTGGCCTCTCCACTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| 3UTR-3UTR CCA 90 bp | AAGGATGAAGAAGCTACAGACCAACGGGACATCTCTGATTCTCCTCCTGGGGCTTGGCATCCAGCTTTCTaGCAATGTTTAGAGATACAG | + |
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Preference number: 2 (lower is better) Translates to: KDEEATDQRDISDSPPGAWHPAF*QCLEIQ Trigger: CTGTATCTCTAAACATTGCCAGAAAGCTGGATGCCA...AGCCCCAGGAGGAGAATCAGAGATGTCCCGTTGGTCTGTAGCTTCTTCATCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| 3UTR-3UTR TCA 90 bp | CAGTCAAGGAAACCACATCCAAACAGAAAGCTCGGGAAAAGGAGTGGTTTCTTCGAGCTTTGCAAAGGATaGAGAAGCTACAGACCAACG | + |
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Preference number: 2 (lower is better) Translates to: QSRKPHPNRKLGKRSGFFELCKG*RSYRPT Trigger: CGTTGGTCTGTAGCTTCTTCATCCTTTGCAAAGCTC...GAAGAAACCACTCCTTTTCCCGAGCTTTCTGTTTGGATGTGGTTTCCTTGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| 3UTR-3UTR TCA 90 bp | GTGGCATCTAGGTTAAGAGAACAGTGGCAGACACATCAAAGATGGTTGTGTGCCACCCAATCCAGAATGTaGTCACATGATGCCTGTGAT | + |
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Preference number: 2 (lower is better) Translates to: VASRLREQWQTHQRWLCATQSRM*SHDACD Trigger: ATCACAGGCATCATGTGATCACATTCTGGATTGGGT...GGCACACAACCATCTTTGATGTGTCTGCCACTGTTCTCTTAACCTAGATGCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| 3UTR-3UTR GCA 90 bp | CAACAAGCAAGAGACAGACATTCTGGAGTATCTTGGCATCCAGCTTTCTGGCAAAAGCAGCCACCCTTCTaGATCTTCCCAAGAGTAGTT | + |
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Preference number: 2 (lower is better) Translates to: QQARDRHSGVSWHPAFWQKQPPF*IFPRVV Trigger: AACTACTCTTGGGAAGATGCAGAAGGGTGGCTGCTT...TTGCCAGAAAGCTGGATGCCAAGATACTCCAGAATGTCTGTCTCTTGCTTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| 3UTR-3UTR TCA 90 bp | AGACAAGAACCGAAGGCAAAACAAGAAGGAAAACCTGACGTGGAAGGAAGAACTCCTGTGATCAGGTCTTaGGCTTTGCAAAGGATGAAG | + |
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Preference number: 2 (lower is better) Translates to: RQEPKAKQEGKPDVEGRTPVIRS*ALQRMK Trigger: CTTCATCCTTTGCAAAGCTCAAGACCTGATCACAGG...AGTTCTTCCTTCCACGTCAGGTTTTCCTTCTTGTTTTGCCTTCGGTTCTTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| 3UTR-3UTR CCA 90 bp | CAGTCAAGGAAACCACATCCAAACAGAAAGCTCGGGAAAAGGAGTGGTTTCTTCAAGAGACAGACATTCTaGAGTATCTTGGCATCCAGC | + |
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Preference number: 2 (lower is better) Translates to: QSRKPHPNRKLGKRSGFFKRQTF*SILASS Trigger: GCTGGATGCCAAGATACTCCAGAATGTCTGTCTCTT...GAAGAAACCACTCCTTTTCCCGAGCTTTCTGTTTGGATGTGGTTTCCTTGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| 3UTR-3UTR CCA 90 bp | CAGTCAAGGAAACCACATCCAAACAGAAAGCTCGGGAAAAGGAGTGGTTTCTTCAAGGAAAACCTGACGTaGAAGGAAGAACTAGAGATT | + |
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Preference number: 2 (lower is better) Translates to: QSRKPHPNRKLGKRSGFFKENLT*KEELEI Trigger: AATCTCTAGTTCTTCCTTCCACGTCAGGTTTTCCTT...GAAGAAACCACTCCTTTTCCCGAGCTTTCTGTTTGGATGTGGTTTCCTTGACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| 3UTR GCA 72 bp | TGGGGTTCTGCCATTCCTAACAAGCAGCCACCCTTCTaGATCTTCCCAAGAGTAGTTAAGGGAACCGAAGGG | + |
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Preference number: 3 (lower is better) Translates to: WGSAIPNKQPPF*IFPRVVKGTEG Trigger: CCCTTCGGTTCCCTTAACTACTCTTGGGAAGATGCAGAAGGGTGGCTGCTTGTTAGGAATGGCAGAACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| 3UTR TCA 72 bp | AACACATGGTGGCTCACAACCATCCACAACAAGATCTaGCTCCCTCTTCTGGAGTGTCTGAAGGCAGCTACA | + |
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Preference number: 3 (lower is better) Translates to: NTWWLTTIHNKI*LPLLECLKAAT Trigger: TGTAGCTGCCTTCAGACACTCCAGAAGAGGGAGTCAGATCTTGTTGTGGATGGTTGTGAGCCACCATGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| 3UTR TCA 72 bp | CTGTTTTTCCCTTTAAAAATGGCAAAGATGGGCTGGTaGGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC | + |
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Preference number: 3 (lower is better) Translates to: LFFPLKMAKMGW*DGSVGKSTRLL Trigger: GAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCATCTTTGCCATTTTTAAAGGGAAAAACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| 3UTR CCA 72 bp | ATCCATCCTTTTCTTTCCTCTTGGTGTTCGCGGCTCTaGAGGGATGCCATTCCTCCACTGAGACAAGAGTTA | + |
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Preference number: 3 (lower is better) Translates to: IHPFLSSWCSRL*RDAIPPLRQEL Trigger: TAACTCTTGTCTCAGTGGAGGAATGGCATCCCTCCAGAGCCGCGAACACCAAGAGGAAAGAAAAGGATGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| 3UTR-3UTR CAA 90 bp | TGTTGGGTGCTTTCTTTAGGCTTTAAACTCAAAGCTCCTGGGGTTCTGCCATTCTCCTTTTCTTTCCTCTaGGTGTTCGCGGCTCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: CWVLSLGFKLKAPGVLPFSFSFL*VFAALE Trigger: CTCCAGAGCCGCGAACACCAAGAGGAAAGAAAAGGA...GAATGGCAGAACCCCAGGAGCTTTGAGTTTAAAGCCTAAAGAAAGCACCCAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| 3UTR TCA 72 bp | TTAAAGAGTCCATGCTATGTAAAGAAGTGTAAGTGGTaGTCTCTCTGCAGGGACTGTTCATGCCATTTAGTC | + |
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Preference number: 3 (lower is better) Translates to: LKSPCYVKKCKW*SLCRDCSCHLV Trigger: GACTAAATGGCATGAACAGTCCCTGCAGAGAGATCACCACTTACACTTCTTTACATAGCATGGACTCTTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| 3UTR CCA 72 bp | GAGACTCTTATTTCAACAAGCAAGAGACAGACATTCTaGAGTATCTTGGCATCCAGCTTTCTGGCAATGTTT | + |
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Preference number: 3 (lower is better) Translates to: ETLISTSKRQTF*SILASSFLAMF Trigger: AAACATTGCCAGAAAGCTGGATGCCAAGATACTCCAGAATGTCTGTCTCTTGCTTGTTGAAATAAGAGTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS-3UTR GCA 90 bp | ATGCCATTTAGTCCTAACTATCCTGATCGCCTTCCTCTGAAGGCAAGTGTTGGGCGCATCCCACACGCGTaGCGCCACCCCAAGGCGCGA | + |
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Preference number: 4 (lower is better) Translates to: MPFSPNYPDRLPLKASVGRIPHA*RHPKAR Trigger: TCGCGCCTTGGGGTGGCGGCACGCGTGTGGGATGCG...CCCAACACTTGCCTTCAGAGGAAGGCGATCAGGATAGTTAGGACTAAATGGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS-3UTR GCA 90 bp | GTGATCTCTCTGCAGGGACTGTTCATGCCATTTAGTCCTAACTATCCTGATCGCGTGCTGTCCGGCAGGTaGCACCTCCCTGTGCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: VISLQGLFMPFSPNYPDRVLSGR*HLPVPG Trigger: GCCAGGCACAGGGAGGTGGCACCTGCCGGACAGCAC...GCGATCAGGATAGTTAGGACTAAATGGCATGAACAGTCCCTGCAGAGAGATCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS-3UTR CCA 90 bp | AAGGATGAAGAAGCTACAGACCAACGGGACATCTCTGATTCTCCTCCTGGGGCTTCCAGGTGGAAGTGCTaGGGCAGGAGGCGCCGAAAG | + |
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Preference number: 4 (lower is better) Translates to: KDEEATDQRDISDSPPGASRWKC*GRRRRK Trigger: CTTTCGGCGCCTCCTGCCCCAGCACTTCCACCTGGA...AGCCCCAGGAGGAGAATCAGAGATGTCCCGTTGGTCTGTAGCTTCTTCATCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS-3UTR CCA 90 bp | CAGAAGCAAAGCATAAGTGTAGACAGAGAGCAATGGCCCTTCCTGGAAGGGATCTGGGCCAGCTCCAGGTaGAAGTGCTGGGGCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: QKQSISVDREQWPFLEGIWASSR*KCWGRR Trigger: CCTCCTGCCCCAGCACTTCCACCTGGAGCTGGCCCA...GATCCCTTCCAGGAAGGGCCATTGCTCTCTGTCTACACTTATGCTTTGCTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS-3UTR GCA 90 bp | GTGATCTCTCTGCAGGGACTGTTCATGCCATTTAGTCCTAACTATCCTGATCGCCCAAGATTCCCACGATaGCCGTCCCCGCGCCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: VISLQGLFMPFSPNYPDRPRFPR*PSPRPV Trigger: AACTGGGCGCGGGGACGGGCATCGTGGGAATCTTGG...GCGATCAGGATAGTTAGGACTAAATGGCATGAACAGTCCCTGCAGAGAGATCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS-3UTR GCA 90 bp | GAAAAGTGGAGAGGCCAGGGAATGCCCATAGAGTTAGGGAACAAAGCGTTAAGAAGGCCAGGTAGATGGTaGCGTGGGGCCCACACAGGT | + |
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Preference number: 4 (lower is better) Translates to: EKWRGQGMPIELGNKALRRPGRW*RGAHTG Trigger: ACCTGTGTGGGCCCCACGGCACCATCTACCTGGCCT...TCTTAACGCTTTGTTCCCTAACTCTATGGGCATTCCCTGGCCTCTCCACTTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS-3UTR GCA 90 bp | CAACAAGCAAGAGACAGACATTCTGGAGTATCTTGGCATCCAGCTTTCTGGCAAAGCTCCAGGTGGAAGTaGTGGGGCAGGAGGCGCCGA | + |
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Preference number: 4 (lower is better) Translates to: QQARDRHSGVSWHPAFWQSSRWK*WGRRRR Trigger: TCGGCGCCTCCTGCCCCAGCACTTCCACCTGGAGCT...TTGCCAGAAAGCTGGATGCCAAGATACTCCAGAATGTCTGTCTCTTGCTTGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS-3UTR CCA 90 bp | GTGATCTCTCTGCAGGGACTGTTCATGCCATTTAGTCCTAACTATCCTGATCGCTGGAGGCCAGGTAGATaGTGCCGTGGGGCCCACACA | + |
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Preference number: 4 (lower is better) Translates to: VISLQGLFMPFSPNYPDRWRPGR*CRGAHT Trigger: TGTGTGGGCCCCACGGCACCATCTACCTGGCCTCCA...GCGATCAGGATAGTTAGGACTAAATGGCATGAACAGTCCCTGCAGAGAGATCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS-3UTR TCA 90 bp | AAATGGCAAAGATGCACGAAGTGGTGGTGCACGCCTTTAATTCCAGCACTTGGGACCCAAAGTTCTGCGTaGTGCTCAGCTCGTGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: KWQRCTKWWCTPLIPALGTQSSA*CSARAH Trigger: GTGGGCACGAGCTGAGCATCACGCAGAACTTTGGGT...CCCAAGTGCTGGAATTAAAGGCGTGCACCACCACTTCGTGCATCTTTGCCATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS-3UTR GCA 90 bp | ATTCTCCTCCTGGGGCTCAGGTCTAGGAAGACTCCCCCTATTGAGACTCTTATTGTGATGCTCAGCTCGTaGCCACAGAAGCAGAACCGG | + |
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Preference number: 4 (lower is better) Translates to: ILLLGLRSRKTPPIETLIVMLSS*PQKQNR Trigger: CCGGTTCTGCTTCTGTGGGCACGAGCTGAGCATCAC...AATAAGAGTCTCAATAGGGGGAGTCTTCCTAGACCTGAGCCCCAGGAGGAGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS-3UTR GCA 90 bp | CAGAAGCAAAGCATAAGTGTAGACAGAGAGCAATGGCCCTTCCTGGAAGGGATCCTCTGCCCCGTGTTCTaGTCTCATCTTGGAGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: QKQSISVDREQWPFLEGILCPVF*SHLGGQ Trigger: CTGGCCTCCAAGATGAGAGCAGAACACGGGGCAGAG...GATCCCTTCCAGGAAGGGCCATTGCTCTCTGTCTACACTTATGCTTTGCTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS-3UTR GCA 90 bp | ATGCCATTTAGTCCTAACTATCCTGATCGCCTTCCTCTGAAGGCAAGTGTTGGGCGCGACCCAAAGTTCTaGGTGATGCTCAGCTCGTGC | + |
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Preference number: 4 (lower is better) Translates to: MPFSPNYPDRLPLKASVGRDPKF*VMLSSC Trigger: GCACGAGCTGAGCATCACGCAGAACTTTGGGTCGCG...CCCAACACTTGCCTTCAGAGGAAGGCGATCAGGATAGTTAGGACTAAATGGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS-3UTR CCA 90 bp | CCGAAGGTCCAGAGTTCAAATCCCAGCAAACACATGGTGGCTCACAACCATCCAGTTCTGCTCTCATCTTaGAGGCCAGGTAGATGGTGC | + |
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Preference number: 4 (lower is better) Translates to: PKVQSSNPSKHMVAHNHPVLLSS*RPGRWC Trigger: GCACCATCTACCTGGCCTCCAAGATGAGAGCAGAAC...TGGATGGTTGTGAGCCACCATGTGTTTGCTGGGATTTGAACTCTGGACCTTCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS-3UTR TCA 90 bp | TGTTGGGTGCTTTCTTTAGGCTTTAAACTCAAAGCTCCTGGGGTTCTGCCATTCCTGAGTAAGAGTCTGTaGAGAGCCGGATCTCCCGTG | + |
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Preference number: 4 (lower is better) Translates to: CWVLSLGFKLKAPGVLPFLSKSL*RAGSPV Trigger: CACGGGAGATCCGGCTCTTCACAGACTCTTACTCAG...GAATGGCAGAACCCCAGGAGCTTTGAGTTTAAAGCCTAAAGAAAGCACCCAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS-3UTR CCA 90 bp | GTGGCATCTAGGTTAAGAGAACAGTGGCAGACACATCAAAGATGGTTGTGTGCCGGTGGCACATTGGCGTaGACGTTATCCTGGATTTGC | + |
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Preference number: 4 (lower is better) Translates to: VASRLREQWQTHQRWLCAGGTLA*TLSWIC Trigger: GCAAATCCAGGATAACGTCCACGCCAATGTGCCACC...GGCACACAACCATCTTTGATGTGTCTGCCACTGTTCTCTTAACCTAGATGCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS-3UTR CCA 90 bp | ATTCTCCTCCTGGGGCTCAGGTCTAGGAAGACTCCCCCTATTGAGACTCTTATTCCAGGAAAGACATGCTaGTCAATTCCCCAGGACAAG | + |
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Preference number: 4 (lower is better) Translates to: ILLLGLRSRKTPPIETLIPGKTC*SIPQDK Trigger: CTTGTCCTGGGGAATTGACCAGCATGTCTTTCCTGG...AATAAGAGTCTCAATAGGGGGAGTCTTCCTAGACCTGAGCCCCAGGAGGAGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS-3UTR GCA 90 bp | GTGATCTCTCTGCAGGGACTGTTCATGCCATTTAGTCCTAACTATCCTGATCGCAGAAGCAGAACCGGCTaGTCTCTGAGTAAGAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: VISLQGLFMPFSPNYPDRRSRTG*SLSKSL Trigger: CAGACTCTTACTCAGAGAGCAGCCGGTTCTGCTTCT...GCGATCAGGATAGTTAGGACTAAATGGCATGAACAGTCCCTGCAGAGAGATCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| 3UTR CAA 72 bp | TCCTCCTGGGGCTCAGGTCTAGGAAGACTCCCCCTATaGAGACTCTTATTTCAACAAGCAAGAGACAGACAT | + |
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Preference number: 4 (lower is better) Translates to: SSWGSGLGRLPL*RLLFQQARDRH Trigger: ATGTCTGTCTCTTGCTTGTTGAAATAAGAGTCTCAATAGGGGGAGTCTTCCTAGACCTGAGCCCCAGGAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS-3UTR GCA 90 bp | GAAAAGTGGAGAGGCCAGGGAATGCCCATAGAGTTAGGGAACAAAGCGTTAAGATTTCCAGGAAAGACATaGTGGTCAATTCCCCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: EKWRGQGMPIELGNKALRFPGKT*WSIPQD Trigger: GTCCTGGGGAATTGACCAGCATGTCTTTCCTGGAAA...TCTTAACGCTTTGTTCCCTAACTCTATGGGCATTCCCTGGCCTCTCCACTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS-3UTR TCA 90 bp | CAACAAGCAAGAGACAGACATTCTGGAGTATCTTGGCATCCAGCTTTCTGGCAATGGCCCTATAGATGTTaGCATTCACATCCTCATCCC | + |
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Preference number: 4 (lower is better) Translates to: QQARDRHSGVSWHPAFWQWPYRC*HSHPHP Trigger: GGGATGAGGATGTGAATGTCAACATCTATAGGGCCA...TTGCCAGAAAGCTGGATGCCAAGATACTCCAGAATGTCTGTCTCTTGCTTGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS-3UTR GCA 90 bp | ATTCTCCTCCTGGGGCTCAGGTCTAGGAAGACTCCCCCTATTGAGACTCTTATTGTTCGATCACCTTCTTaGCTCGAAAATCCACATTTT | + |
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Preference number: 4 (lower is better) Translates to: ILLLGLRSRKTPPIETLIVRSPS*LENPHF Trigger: AAAATGTGGATTTTCGAGGCAAGAAGGTGATCGAAC...AATAAGAGTCTCAATAGGGGGAGTCTTCCTAGACCTGAGCCCCAGGAGGAGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS TCA 90 bp | CCCACACGCGTGCCGCCACCCCAAGGCGCGACCCAAAGTTCTGCGTaGTGCTCAGCTCGTGCCCACAGAAGCAGAACCGGCTGCTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: PTRVPPPQGATQSSA*CSARAHRSRTGCSL Trigger: CAGAGAGCAGCCGGTTCTGCTTCTGTGGGCACGAGCTGAGCATCACGCAGAACTTTGGGTCGCGCCTTGGGGTGGCGGCACGCGTGTGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS GCA 90 bp | GCATCCCACACGCGTGCCGCCACCCCAAGGCGCGACCCAAAGTTCTaGGTGATGCTCAGCTCGTGCCCACAGAAGCAGAACCGGCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: ASHTRAATPRRDPKF*VMLSSCPQKQNRLL Trigger: GAGCAGCCGGTTCTGCTTCTGTGGGCACGAGCTGAGCATCACGCAGAACTTTGGGTCGCGCCTTGGGGTGGCGGCACGCGTGTGGGATGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS CCA 90 bp | GGAGGCGCCGAAAGAAGGTCTCTGCCCCGTGTTCTGCTCTCATCTTaGAGGCCAGGTAGATGGTGCCGTGGGGCCCACACAGGTGTCGGA | + |
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Preference number: 5 (lower is better) Translates to: GGAERRSLPRVLLSS*RPGRWCRGAHTGVG Trigger: TCCGACACCTGTGTGGGCCCCACGGCACCATCTACCTGGCCTCCAAGATGAGAGCAGAACACGGGGCAGAGACCTTCTTTCGGCGCCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS GCA 90 bp | CTCCAGGTGGAAGTGCTGGGGCAGGAGGCGCCGAAAGAAGGTCTCTaGCCCGTGTTCTGCTCTCATCTTGGAGGCCAGGTAGATGGTGCC | + |
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Preference number: 5 (lower is better) Translates to: LQVEVLGQEAPKEGL*PVFCSHLGGQVDGA Trigger: GGCACCATCTACCTGGCCTCCAAGATGAGAGCAGAACACGGGGCAGAGACCTTCTTTCGGCGCCTCCTGCCCCAGCACTTCCACCTGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS CCA 90 bp | CCCAGGACAAGGCGCACACCCGAGCCCGGCCTCCGGGTGGCACATTaGCGTGGACGTTATCCTGGATTTGCTCTAGTGCCACTGGCAAAT | + |
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Preference number: 5 (lower is better) Translates to: PRTRRTPEPGLRVAH*RGRYPGFALVPLAN Trigger: ATTTGCCAGTGGCACTAGAGCAAATCCAGGATAACGTCCACGCCAATGTGCCACCCGGAGGCCGGGCTCGGGTGTGCGCCTTGTCCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS CCA 90 bp | ACATTCACATCCTCATCCCGCTGGGCCAGCTCCAGGTGGAAGTGCTaGGGCAGGAGGCGCCGAAAGAAGGTCTCTGCCCCGTGTTCTGCT | + |
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Preference number: 5 (lower is better) Translates to: TFTSSSRWASSRWKC*GRRRRKKVSAPCSA Trigger: AGCAGAACACGGGGCAGAGACCTTCTTTCGGCGCCTCCTGCCCCAGCACTTCCACCTGGAGCTGGCCCAGCGGGATGAGGATGTGAATGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS CCA 90 bp | GACAAGGCGCACACCCGAGCCCGGCCTCCGGGTGGCACATTGGCGTaGACGTTATCCTGGATTTGCTCTAGTGCCACTGGCAAATCAGTG | + |
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Preference number: 5 (lower is better) Translates to: DKAHTRARPPGGTLA*TLSWICSSATGKSV Trigger: CACTGATTTGCCAGTGGCACTAGAGCAAATCCAGGATAACGTCCACGCCAATGTGCCACCCGGAGGCCGGGCTCGGGTGTGCGCCTTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS TCA 90 bp | CGTGATGCTCAGCTCGTGCCCACAGAAGCAGAACCGGCTGCTCTCTaGGTAAGAGTCTGTGAAGAGCCGGATCTCCCGTGGGAACACGGA | + |
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Preference number: 5 (lower is better) Translates to: RDAQLVPTEAEPAAL*VRVCEEPDLPWEHG Trigger: TCCGTGTTCCCACGGGAGATCCGGCTCTTCACAGACTCTTACTCAGAGAGCAGCCGGTTCTGCTTCTGTGGGCACGAGCTGAGCATCACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS TCA 90 bp | CGTGCCCACAGAAGCAGAACCGGCTGCTCTCTGAGTAAGAGTCTGTaGAGAGCCGGATCTCCCGTGGGAACACGGATTCGGGCTCAGTTT | + |
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Preference number: 5 (lower is better) Translates to: RAHRSRTGCSLSKSL*RAGSPVGTRIRAQF Trigger: AAACTGAGCCCGAATCCGTGTTCCCACGGGAGATCCGGCTCTTCACAGACTCTTACTCAGAGAGCAGCCGGTTCTGCTTCTGTGGGCACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS CCA 90 bp | ACCCGAGCCCGGCCTCCGGGTGGCACATTGGCGTGGACGTTATCCTaGATTTGCTCTAGTGCCACTGGCAAATCAGTGATGGTAACATCC | + |
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Preference number: 5 (lower is better) Translates to: TRARPPGGTLAWTLS*ICSSATGKSVMVTS Trigger: GGATGTTACCATCACTGATTTGCCAGTGGCACTAGAGCAAATCCAGGATAACGTCCACGCCAATGTGCCACCCGGAGGCCGGGCTCGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS-3UTR CAA 90 bp | AAGAACCGAAGGCAAAACAAGAAGGAAAACCTGACGTGGAAGGAAGAACTAGAGAGTTCGATCACCTTCTaGCCTCGAAAATCCACATTT | + |
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Preference number: 5 (lower is better) Translates to: KNRRQNKKENLTWKEELESSITF*PRKSTF Trigger: AAATGTGGATTTTCGAGGCAAGAAGGTGATCGAACT...CTCTAGTTCTTCCTTCCACGTCAGGTTTTCCTTCTTGTTTTGCCTTCGGTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS-3UTR CAA 90 bp | TGTTGGGTGCTTTCTTTAGGCTTTAAACTCAAAGCTCCTGGGGTTCTGCCATTCTCGAAAATCCACATTTaGACTCTCGAAATAGTCACA | + |
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Preference number: 5 (lower is better) Translates to: CWVLSLGFKLKAPGVLPFSKIHI*TLEIVT Trigger: TGTGACTATTTCGAGAGTCAAAATGTGGATTTTCGA...GAATGGCAGAACCCCAGGAGCTTTGAGTTTAAAGCCTAAAGAAAGCACCCAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS CCA 72 bp | TCCTCATCCCGCTGGGCCAGCTCCAGGTGGAAGTGCTaGGGCAGGAGGCGCCGAAAGAAGGTCTCTGCCCCG | + |
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Preference number: 6 (lower is better) Translates to: SSSRWASSRWKC*GRRRRKKVSAP Trigger: CGGGGCAGAGACCTTCTTTCGGCGCCTCCTGCCCCAGCACTTCCACCTGGAGCTGGCCCAGCGGGATGAGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS TCA 72 bp | GTGCCGCCACCCCAAGGCGCGACCCAAAGTTCTGCGTaGTGCTCAGCTCGTGCCCACAGAAGCAGAACCGGC | + |
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Preference number: 6 (lower is better) Translates to: VPPPQGATQSSA*CSARAHRSRTG Trigger: GCCGGTTCTGCTTCTGTGGGCACGAGCTGAGCATCACGCAGAACTTTGGGTCGCGCCTTGGGGTGGCGGCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS CCA 72 bp | CCAGGACAAGGCGCACACCCGAGCCCGGCCTCCGGGTaGCACATTGGCGTGGACGTTATCCTGGATTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: PGQGAHPSPASG*HIGVDVILDLL Trigger: GAGCAAATCCAGGATAACGTCCACGCCAATGTGCCACCCGGAGGCCGGGCTCGGGTGTGCGCCTTGTCCTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS GCA 72 bp | ACGCGTGCCGCCACCCCAAGGCGCGACCCAAAGTTCTaGGTGATGCTCAGCTCGTGCCCACAGAAGCAGAAC | + |
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Preference number: 6 (lower is better) Translates to: TRAATPRRDPKF*VMLSSCPQKQN Trigger: GTTCTGCTTCTGTGGGCACGAGCTGAGCATCACGCAGAACTTTGGGTCGCGCCTTGGGGTGGCGGCACGCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS CCA 72 bp | CACACCCGAGCCCGGCCTCCGGGTGGCACATTGGCGTaGACGTTATCCTGGATTTGCTCTAGTGCCACTGGC | + |
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Preference number: 6 (lower is better) Translates to: HTRARPPGGTLA*TLSWICSSATG Trigger: GCCAGTGGCACTAGAGCAAATCCAGGATAACGTCCACGCCAATGTGCCACCCGGAGGCCGGGCTCGGGTGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS CCA 72 bp | CCCCGTGTTCTGCTCTCATCTTGGAGGCCAGGTAGATaGTGCCGTGGGGCCCACACAGGTGTCGGAGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: PRVLLSSWRPGR*CRGAHTGVGES Trigger: GGACTCTCCGACACCTGTGTGGGCCCCACGGCACCATCTACCTGGCCTCCAAGATGAGAGCAGAACACGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS CAA 90 bp | CCCCAGGACAAGGCGCACACCCGAGCCCGGCCTCCGGGTGGCACATaGGCGTGGACGTTATCCTGGATTTGCTCTAGTGCCACTGGCAAA | + |
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Preference number: 6 (lower is better) Translates to: PQDKAHTRARPPGGT*AWTLSWICSSATGK Trigger: TTTGCCAGTGGCACTAGAGCAAATCCAGGATAACGTCCACGCCAATGTGCCACCCGGAGGCCGGGCTCGGGTGTGCGCCTTGTCCTGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS GCA 72 bp | CGTGTTCTGCTCTCATCTTGGAGGCCAGGTAGATGGTaGCGTGGGGCCCACACAGGTGTCGGAGAGTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: RVLLSSWRPGRW*RGAHTGVGESP Trigger: TGGGGACTCTCCGACACCTGTGTGGGCCCCACGGCACCATCTACCTGGCCTCCAAGATGAGAGCAGAACACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS CCA 72 bp | ACATTCACATCCTCATCCCGCTGGGCCAGCTCCAGGTaGAAGTGCTGGGGCAGGAGGCGCCGAAAGAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: TFTSSSRWASSR*KCWGRRRRKKV Trigger: GACCTTCTTTCGGCGCCTCCTGCCCCAGCACTTCCACCTGGAGCTGGCCCAGCGGGATGAGGATGTGAATGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS TCA 72 bp | CAGCTCGTGCCCACAGAAGCAGAACCGGCTGCTCTCTaGGTAAGAGTCTGTGAAGAGCCGGATCTCCCGTGG | + |
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Preference number: 6 (lower is better) Translates to: QLVPTEAEPAAL*VRVCEEPDLPW Trigger: CCACGGGAGATCCGGCTCTTCACAGACTCTTACTCAGAGAGCAGCCGGTTCTGCTTCTGTGGGCACGAGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS CCA 72 bp | GAAAGAAGGTCTCTGCCCCGTGTTCTGCTCTCATCTTaGAGGCCAGGTAGATGGTGCCGTGGGGCCCACACA | + |
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Preference number: 6 (lower is better) Translates to: ERRSLPRVLLSS*RPGRWCRGAHT Trigger: TGTGTGGGCCCCACGGCACCATCTACCTGGCCTCCAAGATGAGAGCAGAACACGGGGCAGAGACCTTCTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS TCA 72 bp | AGAAGCAGAACCGGCTGCTCTCTGAGTAAGAGTCTGTaGAGAGCCGGATCTCCCGTGGGAACACGGATTCGG | + |
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Preference number: 6 (lower is better) Translates to: RSRTGCSLSKSL*RAGSPVGTRIR Trigger: CCGAATCCGTGTTCCCACGGGAGATCCGGCTCTTCACAGACTCTTACTCAGAGAGCAGCCGGTTCTGCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS CCA 72 bp | CGGCCTCCGGGTGGCACATTGGCGTGGACGTTATCCTaGATTTGCTCTAGTGCCACTGGCAAATCAGTGATG | + |
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Preference number: 6 (lower is better) Translates to: RPPGGTLAWTLS*ICSSATGKSVM Trigger: CATCACTGATTTGCCAGTGGCACTAGAGCAAATCCAGGATAACGTCCACGCCAATGTGCCACCCGGAGGCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS CAA 90 bp | CCCCGCGCCCAGTTCGATCACCTTCTTGCCTCGAAAATCCACATTTaGACTCTCGAAATAGTCACACAGGCTCAGAGCCGCATCCCACAC | + |
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Preference number: 6 (lower is better) Translates to: PRAQFDHLLASKIHI*TLEIVTQAQSRIPH Trigger: GTGTGGGATGCGGCTCTGAGCCTGTGTGACTATTTCGAGAGTCAAAATGTGGATTTTCGAGGCAAGAAGGTGATCGAACTGGGCGCGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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| CDS CAA 72 bp | CAGTTCGATCACCTTCTTGCCTCGAAAATCCACATTTaGACTCTCGAAATAGTCACACAGGCTCAGAGCCGC | + |
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Preference number: 6 (lower is better) Translates to: QFDHLLASKIHI*TLEIVTQAQSR Trigger: GCGGCTCTGAGCCTGTGTGACTATTTCGAGAGTCAAAATGTGGATTTTCGAGGCAAGAAGGTGATCGAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116231.4 |
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