Pregenerated sensors for EEF1AKMT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030960Ensembl transcript IDs: ENSMUST00000033257.15, ENSMUST00000120425.8, ENSMUST00000141920.3, ENSMUST00000152410.8
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAACACCCTGGAGAGAGACATCACATACTGCTTCCTCTTCTCAATTaGATTGTCAGGATTAAGACTTATGGCATCGTAAGTCCCTTTGTC | + |
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Preference number: 1 (lower is better) Translates to: QHPGERHHILLPLLN*IVRIKTYGIVSPFV Trigger: GACAAAGGGACTTACGATGCCATAAGTCTTAATCCTGACAATGCAATTGAGAAGAGGAAGCAGTATGTGATGTCTCTCTCCAGGGTGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000141920.3 ENSMUST00000152410.8 |
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| 3UTR CCA 90 bp | TGTGGCTTCCCATCAACCCATTATTCCTATTCAGTCTGTGTAGCCTaGGTACTTACTAAGTACTATTTGCACTTACTAAGCCTGGGTACT | + |
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Preference number: 1 (lower is better) Translates to: CGFPSTHYSYSVCVA*VLTKYYLHLLSLGT Trigger: AGTACCCAGGCTTAGTAAGTGCAAATAGTACTTAGTAAGTACCCAGGCTACACAGACTGAATAGGAATAATGGGTTGATGGGAAGCCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033257.15 ENSMUST00000120425.8 |
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| 3UTR GCA 90 bp | GTACTATTTGCACTTACTAAGCCTGGGTACTTACTAAGCACTATTTaGACTTCCTTCTTCTGTATCAGGTTGACTTTGCAGTTTCTTCTA | + |
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Preference number: 1 (lower is better) Translates to: VLFALTKPGYLLSTI*TSFFCIRLTLQFLL Trigger: TAGAAGAAACTGCAAAGTCAACCTGATACAGAAGAAGGAAGTGCAAATAGTGCTTAGTAAGTACCCAGGCTTAGTAAGTGCAAATAGTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033257.15 ENSMUST00000120425.8 |
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| 3UTR GCA 72 bp | GCACTTACTAAGCCTGGGTACTTACTAAGCACTATTTaGACTTCCTTCTTCTGTATCAGGTTGACTTTGCAG | + |
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Preference number: 3 (lower is better) Translates to: ALTKPGYLLSTI*TSFFCIRLTLQ Trigger: CTGCAAAGTCAACCTGATACAGAAGAAGGAAGTGCAAATAGTGCTTAGTAAGTACCCAGGCTTAGTAAGTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033257.15 ENSMUST00000120425.8 |
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| 3UTR GCA 72 bp | GGAGAGAGACATCACATACTGCTTCCTCTTCTCAATTaGATTGTCAGGATTAAGACTTATGGCATCGTAAGT | + |
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Preference number: 3 (lower is better) Translates to: GERHHILLPLLN*IVRIKTYGIVS Trigger: ACTTACGATGCCATAAGTCTTAATCCTGACAATGCAATTGAGAAGAGGAAGCAGTATGTGATGTCTCTCTCC 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000141920.3 ENSMUST00000152410.8 |
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| 3UTR CCA 72 bp | CCATCAACCCATTATTCCTATTCAGTCTGTGTAGCCTaGGTACTTACTAAGTACTATTTGCACTTACTAAGC | + |
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Preference number: 3 (lower is better) Translates to: PSTHYSYSVCVA*VLTKYYLHLLS Trigger: GCTTAGTAAGTGCAAATAGTACTTAGTAAGTACCCAGGCTACACAGACTGAATAGGAATAATGGGTTGATGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033257.15 ENSMUST00000120425.8 |
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| CDS-3UTR GCA 90 bp | CCATCAACCCATTATTCCTATTCAGTCTGTGTAGCCTGGGTACTTACTAAGTACCTGCCCTCTGGAGATTaGGCGGGGACCACAGCACCG | + |
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Preference number: 4 (lower is better) Translates to: PSTHYSYSVCVAWVLTKYLPSGD*AGTTAP Trigger: CGGTGCTGTGGTCCCCGCGCAATCTCCAGAGGGCAG...GTACTTAGTAAGTACCCAGGCTACACAGACTGAATAGGAATAATGGGTTGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033257.15 ENSMUST00000120425.8 |
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| CDS-3UTR CCA 90 bp | CCATCAACCCATTATTCCTATTCAGTCTGTGTAGCCTGGGTACTTACTAAGTACCGCGGAACTGCCCTCTaGAGATTGCGCGGGGACCAC | + |
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Preference number: 4 (lower is better) Translates to: PSTHYSYSVCVAWVLTKYRGTAL*RLRGDH Trigger: GTGGTCCCCGCGCAATCTCCAGAGGGCAGTTCCGCG...GTACTTAGTAAGTACCCAGGCTACACAGACTGAATAGGAATAATGGGTTGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033257.15 ENSMUST00000120425.8 |
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| CDS-3UTR GCA 90 bp | CCTCTTCTCAATTGCATTGTCAGGATTAAGACTTATGGCATCGTAAGTCCCTTTCTGCCCTCTGGAGATTaGGCGGGGACCACAGCACCG | + |
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Preference number: 4 (lower is better) Translates to: PLLNCIVRIKTYGIVSPFLPSGD*AGTTAP Trigger: CGGTGCTGTGGTCCCCGCGCAATCTCCAGAGGGCAG...AAAGGGACTTACGATGCCATAAGTCTTAATCCTGACAATGCAATTGAGAAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000141920.3 ENSMUST00000152410.8 |
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| CDS-3UTR GCA 90 bp | GAGAGACATCACATACTGCTTCCTCTTCTCAATTGCATTGTCAGGATTAAGACTCTGCCCTCTGGAGATTaGGCGGGGACCACAGCACCG | + |
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Preference number: 4 (lower is better) Translates to: ERHHILLPLLNCIVRIKTLPSGD*AGTTAP Trigger: CGGTGCTGTGGTCCCCGCGCAATCTCCAGAGGGCAG...AGTCTTAATCCTGACAATGCAATTGAGAAGAGGAAGCAGTATGTGATGTCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000141920.3 ENSMUST00000152410.8 |
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| CDS-3UTR CCA 90 bp | CTATTTGCACTTACTAAGCCTGGGTACTTACTAAGCACTATTTGCACTTCCTTCCGCGGAACTGCCCTCTaGAGATTGCGCGGGGACCAC | + |
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Preference number: 4 (lower is better) Translates to: LFALTKPGYLLSTICTSFRGTAL*RLRGDH Trigger: GTGGTCCCCGCGCAATCTCCAGAGGGCAGTTCCGCG...GAAGGAAGTGCAAATAGTGCTTAGTAAGTACCCAGGCTTAGTAAGTGCAAATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033257.15 ENSMUST00000120425.8 |
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| CDS-3UTR CCA 90 bp | CATCACATACTGCTTCCTCTTCTCAATTGCATTGTCAGGATTAAGACTTATGGCCGCGGAACTGCCCTCTaGAGATTGCGCGGGGACCAC | + |
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Preference number: 4 (lower is better) Translates to: HHILLPLLNCIVRIKTYGRGTAL*RLRGDH Trigger: GTGGTCCCCGCGCAATCTCCAGAGGGCAGTTCCGCG...GCCATAAGTCTTAATCCTGACAATGCAATTGAGAAGAGGAAGCAGTATGTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000141920.3 ENSMUST00000152410.8 |
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| CDS-3UTR CCA 90 bp | ACATACTGCTTCCTCTTCTCAATTGCATTGTCAGGATTAAGACTTATGGCATCGCGCGGAACTGCCCTCTaGAGATTGCGCGGGGACCAC | + |
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Preference number: 4 (lower is better) Translates to: TYCFLFSIALSGLRLMASRGTAL*RLRGDH Trigger: GTGGTCCCCGCGCAATCTCCAGAGGGCAGTTCCGCG...CGATGCCATAAGTCTTAATCCTGACAATGCAATTGAGAAGAGGAAGCAGTATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000141920.3 ENSMUST00000152410.8 |
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| CDS-3UTR GCA 90 bp | ACTAAGCACTATTTGCACTTCCTTCTTCTGTATCAGGTTGACTTTGCAGTTTCTCTGCCCTCTGGAGATTaGGCGGGGACCACAGCACCG | + |
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Preference number: 4 (lower is better) Translates to: TKHYLHFLLLYQVDFAVSLPSGD*AGTTAP Trigger: CGGTGCTGTGGTCCCCGCGCAATCTCCAGAGGGCAG...AGAAACTGCAAAGTCAACCTGATACAGAAGAAGGAAGTGCAAATAGTGCTTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033257.15 ENSMUST00000120425.8 |
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| CDS-3UTR TCA 90 bp | CCATCAACCCATTATTCCTATTCAGTCTGTGTAGCCTGGGTACTTACTAAGTACATCTACCTCCAAAGCTaGACTTGGGTGTTGGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: PSTHYSYSVCVAWVLTKYIYLQS*TWVLAA Trigger: AGCTGCCAACACCCAAGTTCAGCTTTGGAGGTAGAT...GTACTTAGTAAGTACCCAGGCTACACAGACTGAATAGGAATAATGGGTTGATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033257.15 ENSMUST00000120425.8 |
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| CDS-3UTR CCA 90 bp | GTAGCCTGGGTACTTACTAAGTACTATTTGCACTTACTAAGCCTGGGTACTTACGCTGAACTTGGGTGTTaGCAGCTCTTCAAAAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: VAWVLTKYYLHLLSLGTYAELGC*QLFKKF Trigger: GAACTTTTTGAAGAGCTGCCAACACCCAAGTTCAGC...GTAAGTACCCAGGCTTAGTAAGTGCAAATAGTACTTAGTAAGTACCCAGGCTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033257.15 ENSMUST00000120425.8 |
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| CDS-3UTR TCA 90 bp | CTGCTTCCTCTTCTCAATTGCATTGTCAGGATTAAGACTTATGGCATCGTAAGTTCCAATATCAAGCACTaGGGCATCCAATGGGATCTT | + |
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Preference number: 4 (lower is better) Translates to: LLPLLNCIVRIKTYGIVSSNIKH*GIQWDL Trigger: AAGATCCCATTGGATGCCTCAGTGCTTGATATTGGA...ACTTACGATGCCATAAGTCTTAATCCTGACAATGCAATTGAGAAGAGGAAGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152410.8 |
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| CDS-3UTR TCA 90 bp | TATTCCTATTCAGTCTGTGTAGCCTGGGTACTTACTAAGTACTATTTGCACTTAATCTACCTCCAAAGCTaGACTTGGGTGTTGGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: YSYSVCVAWVLTKYYLHLIYLQS*TWVLAA Trigger: AGCTGCCAACACCCAAGTTCAGCTTTGGAGGTAGAT...TAAGTGCAAATAGTACTTAGTAAGTACCCAGGCTACACAGACTGAATAGGAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033257.15 ENSMUST00000120425.8 |
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| CDS-3UTR CCA 90 bp | GTACTATTTGCACTTACTAAGCCTGGGTACTTACTAAGCACTATTTGCACTTCCGCTGAACTTGGGTGTTaGCAGCTCTTCAAAAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: VLFALTKPGYLLSTICTSAELGC*QLFKKF Trigger: GAACTTTTTGAAGAGCTGCCAACACCCAAGTTCAGC...GGAAGTGCAAATAGTGCTTAGTAAGTACCCAGGCTTAGTAAGTGCAAATAGTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033257.15 ENSMUST00000120425.8 |
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| CDS-3UTR TCA 90 bp | CACTATTTGCACTTCCTTCTTCTGTATCAGGTTGACTTTGCAGTTTCTTCTAGATCCAATATCAAGCACTaGGGCATCCAATGGGATCTT | + |
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Preference number: 4 (lower is better) Translates to: HYLHFLLLYQVDFAVSSRSNIKH*GIQWDL Trigger: AAGATCCCATTGGATGCCTCAGTGCTTGATATTGGA...TCTAGAAGAAACTGCAAAGTCAACCTGATACAGAAGAAGGAAGTGCAAATAGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033257.15 ENSMUST00000120425.8 |
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| CDS-3UTR TCA 90 bp | TACTTACTAAGCACTATTTGCACTTCCTTCTTCTGTATCAGGTTGACTTTGCAGTCCAATATCAAGCACTaGGGCATCCAATGGGATCTT | + |
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Preference number: 4 (lower is better) Translates to: YLLSTICTSFFCIRLTLQSNIKH*GIQWDL Trigger: AAGATCCCATTGGATGCCTCAGTGCTTGATATTGGA...CTGCAAAGTCAACCTGATACAGAAGAAGGAAGTGCAAATAGTGCTTAGTAAGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033257.15 ENSMUST00000120425.8 |
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| CDS-3UTR CCA 90 bp | TCAACCCATTATTCCTATTCAGTCTGTGTAGCCTGGGTACTTACTAAGTACTATCTAGCAACTCTGCCTTaGTCCAATTACATGAGGTTA | + |
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Preference number: 4 (lower is better) Translates to: STHYSYSVCVAWVLTKYYLATLP*SNYMRL Trigger: TAACCTCATGTAATTGGACCAAGGCAGAGTTGCTAG...ATAGTACTTAGTAAGTACCCAGGCTACACAGACTGAATAGGAATAATGGGTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033257.15 |
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| CDS-3UTR GCA 90 bp | CACTATTTGCACTTCCTTCTTCTGTATCAGGTTGACTTTGCAGTTTCTTCTAGAAGAGACATCACATACTaGTTCCTCTTCTCAATTGCA | + |
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Preference number: 4 (lower is better) Translates to: HYLHFLLLYQVDFAVSSRRDITY*FLFSIA Trigger: TGCAATTGAGAAGAGGAAGCAGTATGTGATGTCTCT...TCTAGAAGAAACTGCAAAGTCAACCTGATACAGAAGAAGGAAGTGCAAATAGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033257.15 |
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| CDS-3UTR CCA 90 bp | TACTTACTAAGCACTATTTGCACTTCCTTCTTCTGTATCAGGTTGACTTTGCAGGTATCCCCATATTCTTaGAATGTTCTCAGTTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: YLLSTICTSFFCIRLTLQVSPYS*NVLSSL Trigger: GAGAGAACTGAGAACATTCCAAGAATATGGGGATAC...CTGCAAAGTCAACCTGATACAGAAGAAGGAAGTGCAAATAGTGCTTAGTAAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033257.15 ENSMUST00000120425.8 |
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| CDS-3UTR GCA 90 bp | TCAACCCATTATTCCTATTCAGTCTGTGTAGCCTGGGTACTTACTAAGTACTATCTTCCTCTTCTCAATTaGATTGTCAGGATTAAGACT | + |
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Preference number: 4 (lower is better) Translates to: STHYSYSVCVAWVLTKYYLPLLN*IVRIKT Trigger: AGTCTTAATCCTGACAATGCAATTGAGAAGAGGAAG...ATAGTACTTAGTAAGTACCCAGGCTACACAGACTGAATAGGAATAATGGGTTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033257.15 |
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| CDS GCA 90 bp | CTCGTGTCCCCAGCGCGGACGGGACGAAGTCATCCGCCGCGGAACTaGCCTCTGGAGATTGCGCGGGGACCACAGCACCGCTGTGGCCCT | + |
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Preference number: 5 (lower is better) Translates to: LVSPARTGRSHPPRN*PLEIARGPQHRCGP Trigger: AGGGCCACAGCGGTGCTGTGGTCCCCGCGCAATCTCCAGAGGGCAGTTCCGCGGCGGATGACTTCGTCCCGTCCGCGCTGGGGACACGAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033257.15 ENSMUST00000120425.8 ENSMUST00000152410.8 |
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| CDS CCA 90 bp | CCCCAGCGCGGACGGGACGAAGTCATCCGCCGCGGAACTGCCCTCTaGAGATTGCGCGGGGACCACAGCACCGCTGTGGCCCTCAGCATC | + |
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Preference number: 5 (lower is better) Translates to: PQRGRDEVIRRGTAL*RLRGDHSTAVALSI Trigger: GATGCTGAGGGCCACAGCGGTGCTGTGGTCCCCGCGCAATCTCCAGAGGGCAGTTCCGCGGCGGATGACTTCGTCCCGTCCGCGCTGGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033257.15 ENSMUST00000120425.8 ENSMUST00000152410.8 |
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| CDS GCA 90 bp | GTTCCAATATCAAGCACTGAGGCATCCAATGGGATCTTGTGTTTCTaGATCCACCGTATTAGTCGGTTCATACTCTCTTCCCCAAACCAG | + |
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Preference number: 5 (lower is better) Translates to: VPISSTEASNGILCF*IHRISRFILSSPNQ Trigger: CTGGTTTGGGGAAGAGAGTATGAACCGACTAATACGGTGGATGCAGAAACACAAGATCCCATTGGATGCCTCAGTGCTTGATATTGGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033257.15 ENSMUST00000120425.8 ENSMUST00000152410.8 |
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| CDS-3UTR CAA 90 bp | TCAACCCATTATTCCTATTCAGTCTGTGTAGCCTGGGTACTTACTAAGTACTATCCTCCAAAGCTGAACTaGGGTGTTGGCAGCTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: STHYSYSVCVAWVLTKYYPPKLN*GVGSSS Trigger: TGAAGAGCTGCCAACACCCAAGTTCAGCTTTGGAGG...ATAGTACTTAGTAAGTACCCAGGCTACACAGACTGAATAGGAATAATGGGTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033257.15 ENSMUST00000120425.8 |
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| CDS-3UTR CAA 90 bp | CCCTGGAGAGAGACATCACATACTGCTTCCTCTTCTCAATTGCATTGTCAGGATTGTATCCCCATATTCTaGGAATGTTCTCAGTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: PWRETSHTASSSQLHCQDCIPIF*ECSQFS Trigger: AGAGAACTGAGAACATTCCAAGAATATGGGGATACA...ATCCTGACAATGCAATTGAGAAGAGGAAGCAGTATGTGATGTCTCTCTCCAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000141920.3 ENSMUST00000152410.8 |
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| CDS-3UTR CAA 90 bp | GCACTTACTAAGCCTGGGTACTTACTAAGCACTATTTGCACTTCCTTCTTCTGTTCTAGCAACTCTGCCTaGGTCCAATTACATGAGGTT | + |
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Preference number: 5 (lower is better) Translates to: ALTKPGYLLSTICTSFFCSSNSA*VQLHEV Trigger: AACCTCATGTAATTGGACCAAGGCAGAGTTGCTAGA...ACAGAAGAAGGAAGTGCAAATAGTGCTTAGTAAGTACCCAGGCTTAGTAAGTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033257.15 |
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| CDS-3UTR CAA 90 bp | ACTATTTGCACTTCCTTCTTCTGTATCAGGTTGACTTTGCAGTTTCTTCTAGAACCTCCAAAGCTGAACTaGGGTGTTGGCAGCTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: TICTSFFCIRLTLQFLLEPPKLN*GVGSSS Trigger: TGAAGAGCTGCCAACACCCAAGTTCAGCTTTGGAGG...TTCTAGAAGAAACTGCAAAGTCAACCTGATACAGAAGAAGGAAGTGCAAATAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033257.15 ENSMUST00000120425.8 |
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| CDS-3UTR CAA 90 bp | ACTATTTGCACTTCCTTCTTCTGTATCAGGTTGACTTTGCAGTTTCTTCTAGAAGCATCCAATGGGATCTaGTGTTTCTGCATCCACCGT | + |
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Preference number: 5 (lower is better) Translates to: TICTSFFCIRLTLQFLLEASNGI*CFCIHR Trigger: ACGGTGGATGCAGAAACACAAGATCCCATTGGATGC...TTCTAGAAGAAACTGCAAAGTCAACCTGATACAGAAGAAGGAAGTGCAAATAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033257.15 ENSMUST00000120425.8 |
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| CDS-3UTR CAA 90 bp | GCACTTACTAAGCCTGGGTACTTACTAAGCACTATTTGCACTTCCTTCTTCTGTTGTATCCCCATATTCTaGGAATGTTCTCAGTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: ALTKPGYLLSTICTSFFCCIPIF*ECSQFS Trigger: AGAGAACTGAGAACATTCCAAGAATATGGGGATACA...ACAGAAGAAGGAAGTGCAAATAGTGCTTAGTAAGTACCCAGGCTTAGTAAGTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033257.15 ENSMUST00000120425.8 |
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| CDS-3UTR CAA 90 bp | GTAGCCTGGGTACTTACTAAGTACTATTTGCACTTACTAAGCCTGGGTACTTACTGTATCCCCATATTCTaGGAATGTTCTCAGTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: VAWVLTKYYLHLLSLGTYCIPIF*ECSQFS Trigger: AGAGAACTGAGAACATTCCAAGAATATGGGGATACA...GTAAGTACCCAGGCTTAGTAAGTGCAAATAGTACTTAGTAAGTACCCAGGCTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033257.15 ENSMUST00000120425.8 |
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| CDS-3UTR CAA 90 bp | ACATACTGCTTCCTCTTCTCAATTGCATTGTCAGGATTAAGACTTATGGCATCGTGTATCCCCATATTCTaGGAATGTTCTCAGTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: TYCFLFSIALSGLRLMASCIPIF*ECSQFS Trigger: AGAGAACTGAGAACATTCCAAGAATATGGGGATACA...CGATGCCATAAGTCTTAATCCTGACAATGCAATTGAGAAGAGGAAGCAGTATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000141920.3 ENSMUST00000152410.8 |
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| CDS CAA 90 bp | CCATTTCCAGTTCCAATATCAAGCACTGAGGCATCCAATGGGATCTaGTGTTTCTGCATCCACCGTATTAGTCGGTTCATACTCTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: PFPVPISSTEASNGI*CFCIHRISRFILSS Trigger: GGAAGAGAGTATGAACCGACTAATACGGTGGATGCAGAAACACAAGATCCCATTGGATGCCTCAGTGCTTGATATTGGAACTGGAAATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033257.15 ENSMUST00000120425.8 ENSMUST00000152410.8 |
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| CDS TCA 72 bp | CAGGAAAACACCATTTCCAGTTCCAATATCAAGCACTaGGGCATCCAATGGGATCTTGTGTTTCTGCATCCA | + |
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Preference number: 6 (lower is better) Translates to: QENTISSSNIKH*GIQWDLVFLHP Trigger: TGGATGCAGAAACACAAGATCCCATTGGATGCCTCAGTGCTTGATATTGGAACTGGAAATGGTGTTTTCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033257.15 ENSMUST00000120425.8 ENSMUST00000152410.8 |
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| CDS CAA 72 bp | GTTCCAATATCAAGCACTGAGGCATCCAATGGGATCTaGTGTTTCTGCATCCACCGTATTAGTCGGTTCATA | + |
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Preference number: 6 (lower is better) Translates to: VPISSTEASNGI*CFCIHRISRFI Trigger: TATGAACCGACTAATACGGTGGATGCAGAAACACAAGATCCCATTGGATGCCTCAGTGCTTGATATTGGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033257.15 ENSMUST00000120425.8 ENSMUST00000152410.8 |
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| CDS CAA 90 bp | ACCAAAGCTGCTACAGTGTTTCCAGATCTACCTCCAAAGCTGAACTaGGGTGTTGGCAGCTCTTCAAAAAGTTCAAATCCTTCACTGAAT | + |
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Preference number: 6 (lower is better) Translates to: TKAATVFPDLPPKLN*GVGSSSKSSNPSLN Trigger: ATTCAGTGAAGGATTTGAACTTTTTGAAGAGCTGCCAACACCCAAGTTCAGCTTTGGAGGTAGATCTGGAAACACTGTAGCAGCTTTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033257.15 |
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