Pregenerated sensors for EEF1AKMT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021951Ensembl transcript IDs: ENSMUST00000022518.8, ENSMUST00000239099.2
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGCAGAGAAAGGGGGAGGTCACAATGTTTCCACAGAACGAGAACTaGGAAATGAATGTGGAGTCCTCTATGGAACTGCTGCCATGTGAA | + |
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Preference number: 1 (lower is better) Translates to: GQRKGEVTMFPQNEN*EMNVESSMELLPCE Trigger: TTCACATGGCAGCAGTTCCATAGAGGACTCCACATTCATTTCCCAGTTCTCGTTCTGTGGAAACATTGTGACCTCCCCCTTTCTCTGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022518.8 ENSMUST00000239099.2 |
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| CDS-3UTR TCA 90 bp | CCAGGGCAGAGAAAGGGGGAGGTCACAATGTTTCCACAGAACGAGAACTGGGAACATCCCCTCTGGGGTTaGCGGATTGCTTCTGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: PGQRKGEVTMFPQNENWEHPLWG*RIASAQ Trigger: CTGAGCAGAAGCAATCCGTCAACCCCAGAGGGGATG...TTCCCAGTTCTCGTTCTGTGGAAACATTGTGACCTCCCCCTTTCTCTGCCCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022518.8 ENSMUST00000239099.2 |
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| CDS-3UTR TCA 90 bp | CCAGGGCAGAGAAAGGGGGAGGTCACAATGTTTCCACAGAACGAGAACTGGGAACTGCCTGCTCTTCCATaGTGGCTCCTGTGCACAGCA | + |
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Preference number: 4 (lower is better) Translates to: PGQRKGEVTMFPQNENWELPALP*WLLCTA Trigger: TGCTGTGCACAGGAGCCATCATGGAAGAGCAGGCAG...TTCCCAGTTCTCGTTCTGTGGAAACATTGTGACCTCCCCCTTTCTCTGCCCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022518.8 ENSMUST00000239099.2 |
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| CDS-3UTR TCA 90 bp | GGGCAGAGAAAGGGGGAGGTCACAATGTTTCCACAGAACGAGAACTGGGAAATGCATCCCCTCTGGGGTTaGCGGATTGCTTCTGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: GQRKGEVTMFPQNENWEMHPLWG*RIASAQ Trigger: CTGAGCAGAAGCAATCCGTCAACCCCAGAGGGGATG...CATTTCCCAGTTCTCGTTCTGTGGAAACATTGTGACCTCCCCCTTTCTCTGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022518.8 ENSMUST00000239099.2 |
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| CDS-3UTR GCA 90 bp | CCAGCCAGGGCAGAGAAAGGGGGAGGTCACAATGTTTCCACAGAACGAGAACTGCAGAACTGGCTCAGCTaGCAGTTCTCCTCTATTACC | + |
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Preference number: 4 (lower is better) Translates to: PARAEKGGGHNVSTERELQNWLS*QFSSIT Trigger: GGTAATAGAGGAGAACTGGCAGCTGAGCCAGTTCTG...CAGTTCTCGTTCTGTGGAAACATTGTGACCTCCCCCTTTCTCTGCCCTGGCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022518.8 ENSMUST00000239099.2 |
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| CDS-3UTR GCA 90 bp | CCACAGAACGAGAACTGGGAAATGAATGTGGAGTCCTCTATGGAACTGCTGCCAACCCAGGAGCTGAGCTaGCTGCTCTTCCATGATGGC | + |
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Preference number: 4 (lower is better) Translates to: PQNENWEMNVESSMELLPTQELS*LLFHDG Trigger: GCCATCATGGAAGAGCAGGCAGCTCAGCTCCTGGGT...TGGCAGCAGTTCCATAGAGGACTCCACATTCATTTCCCAGTTCTCGTTCTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022518.8 ENSMUST00000239099.2 |
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| CDS-3UTR CCA 90 bp | CCAGCCAGGGCAGAGAAAGGGGGAGGTCACAATGTTTCCACAGAACGAGAACTGGTATGGGAAGAGAGCTaGGGTATGTCGTCGTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: PARAEKGGGHNVSTERELVWEES*GMSSSS Trigger: AGAAGACGACGACATACCCCAGCTCTCTTCCCATAC...CAGTTCTCGTTCTGTGGAAACATTGTGACCTCCCCCTTTCTCTGCCCTGGCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022518.8 ENSMUST00000239099.2 |
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| CDS-3UTR CCA 90 bp | CCAGCCAGGGCAGAGAAAGGGGGAGGTCACAATGTTTCCACAGAACGAGAACTGAGAGCTGCTAAGGTATaGGAAGAGAGCTGGGGTATG | + |
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Preference number: 4 (lower is better) Translates to: PARAEKGGGHNVSTERELRAAKV*EESWGM Trigger: CATACCCCAGCTCTCTTCCCATACCTTAGCAGCTCT...CAGTTCTCGTTCTGTGGAAACATTGTGACCTCCCCCTTTCTCTGCCCTGGCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022518.8 ENSMUST00000239099.2 |
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| CDS-3UTR TCA 90 bp | GAGAAAGGGGGAGGTCACAATGTTTCCACAGAACGAGAACTGGGAAATGAATGTCTGCCTGCTCTTCCATaGTGGCTCCTGTGCACAGCA | + |
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Preference number: 4 (lower is better) Translates to: EKGGGHNVSTERELGNECLPALP*WLLCTA Trigger: TGCTGTGCACAGGAGCCATCATGGAAGAGCAGGCAG...ACATTCATTTCCCAGTTCTCGTTCTGTGGAAACATTGTGACCTCCCCCTTTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022518.8 ENSMUST00000239099.2 |
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| CDS-3UTR GCA 90 bp | CACAATGTTTCCACAGAACGAGAACTGGGAAATGAATGTGGAGTCCTCTATGGAACCCAGGAGCTGAGCTaGCTGCTCTTCCATGATGGC | + |
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Preference number: 4 (lower is better) Translates to: HNVSTERELGNECGVLYGTQELS*LLFHDG Trigger: GCCATCATGGAAGAGCAGGCAGCTCAGCTCCTGGGT...TCCATAGAGGACTCCACATTCATTTCCCAGTTCTCGTTCTGTGGAAACATTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022518.8 ENSMUST00000239099.2 |
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| CDS-3UTR GCA 90 bp | CACAATGTTTCCACAGAACGAGAACTGGGAAATGAATGTGGAGTCCTCTATGGATCACACACGCGATTCTaGCTCCTTCTCCAGCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: HNVSTERELGNECGVLYGSHTRF*LLLQQH Trigger: ATGCTGCTGGAGAAGGAGGCAGAATCGCGTGTGTGA...TCCATAGAGGACTCCACATTCATTTCCCAGTTCTCGTTCTGTGGAAACATTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022518.8 ENSMUST00000239099.2 |
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| CDS-3UTR CCA 90 bp | GAGAAAGGGGGAGGTCACAATGTTTCCACAGAACGAGAACTGGGAAATGAATGTGTATGGGAAGAGAGCTaGGGTATGTCGTCGTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: EKGGGHNVSTERELGNECVWEES*GMSSSS Trigger: AGAAGACGACGACATACCCCAGCTCTCTTCCCATAC...ACATTCATTTCCCAGTTCTCGTTCTGTGGAAACATTGTGACCTCCCCCTTTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022518.8 ENSMUST00000239099.2 |
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| CDS-3UTR CCA 90 bp | GTTTCCACAGAACGAGAACTGGGAAATGAATGTGGAGTCCTCTATGGAACTGCTAGAGCTGCTAAGGTATaGGAAGAGAGCTGGGGTATG | + |
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Preference number: 4 (lower is better) Translates to: VSTERELGNECGVLYGTARAAKV*EESWGM Trigger: CATACCCCAGCTCTCTTCCCATACCTTAGCAGCTCT...AGCAGTTCCATAGAGGACTCCACATTCATTTCCCAGTTCTCGTTCTGTGGAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022518.8 ENSMUST00000239099.2 |
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| CDS-3UTR TCA 90 bp | CAGAGAAAGGGGGAGGTCACAATGTTTCCACAGAACGAGAACTGGGAAATGAATTTTCAGATGTCTTCCTaGGACATTCCTCAGACAGGT | + |
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Preference number: 4 (lower is better) Translates to: QRKGEVTMFPQNENWEMNFQMSS*DIPQTG Trigger: ACCTGTCTGAGGAATGTCTCAGGAAGACATCTGAAA...ATTCATTTCCCAGTTCTCGTTCTGTGGAAACATTGTGACCTCCCCCTTTCTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022518.8 ENSMUST00000239099.2 |
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| CDS-3UTR GCA 90 bp | AATGTTTCCACAGAACGAGAACTGGGAAATGAATGTGGAGTCCTCTATGGAACTCAGAACTGGCTCAGCTaGCAGTTCTCCTCTATTACC | + |
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Preference number: 4 (lower is better) Translates to: NVSTERELGNECGVLYGTQNWLS*QFSSIT Trigger: GGTAATAGAGGAGAACTGGCAGCTGAGCCAGTTCTG...AGTTCCATAGAGGACTCCACATTCATTTCCCAGTTCTCGTTCTGTGGAAACATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022518.8 ENSMUST00000239099.2 |
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| CDS-3UTR TCA 90 bp | ATGTTTCCACAGAACGAGAACTGGGAAATGAATGTGGAGTCCTCTATGGAACTGTTTCAGATGTCTTCCTaGGACATTCCTCAGACAGGT | + |
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Preference number: 4 (lower is better) Translates to: MFPQNENWEMNVESSMELFQMSS*DIPQTG Trigger: ACCTGTCTGAGGAATGTCTCAGGAAGACATCTGAAA...CAGTTCCATAGAGGACTCCACATTCATTTCCCAGTTCTCGTTCTGTGGAAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022518.8 ENSMUST00000239099.2 |
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| CDS-3UTR TCA 90 bp | ATGTTTCCACAGAACGAGAACTGGGAAATGAATGTGGAGTCCTCTATGGAACTGTATGTCGTCGTCTTCTaGCTCACTCATTTCACAAAG | + |
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Preference number: 4 (lower is better) Translates to: MFPQNENWEMNVESSMELYVVVF*LTHFTK Trigger: CTTTGTGAAATGAGTGAGTCAGAAGACGACGACATA...CAGTTCCATAGAGGACTCCACATTCATTTCCCAGTTCTCGTTCTGTGGAAACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022518.8 |
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| CDS CCA 90 bp | AGAGCTGTCTTCCCTACAGAGCTCCCGGAGCTTCTGGTACACGCTTaGCGCGCTCACACACGCGATTCTGCCTCCTTCTCCAGCAGCATC | + |
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Preference number: 5 (lower is better) Translates to: RAVFPTELPELLVHA*RAHTRDSASFSSSI Trigger: GATGCTGCTGGAGAAGGAGGCAGAATCGCGTGTGTGAGCGCGCCAAGCGTGTACCAGAAGCTCCGGGAGCTCTGTAGGGAAGACAGCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022518.8 ENSMUST00000239099.2 |
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| CDS GCA 90 bp | ACACGCGATTCTGCCTCCTTCTCCAGCAGCATCGATCGCTTCCCGTaGAAGTCGCAAAGCAGTGTCCTGACTGTACCAGAACTGGCTCAG | + |
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Preference number: 5 (lower is better) Translates to: TRDSASFSSSIDRFP*KSQSSVLTVPELAQ Trigger: CTGAGCCAGTTCTGGTACAGTCAGGACACTGCTTTGCGACTTGCACGGGAAGCGATCGATGCTGCTGGAGAAGGAGGCAGAATCGCGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022518.8 ENSMUST00000239099.2 |
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| CDS TCA 90 bp | CCAGCAGCATCGATCGCTTCCCGTGCAAGTCGCAAAGCAGTGTCCTaGCTGTACCAGAACTGGCTCAGCTGCCAGTTCTCCTCTATTACC | + |
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Preference number: 5 (lower is better) Translates to: PAASIASRASRKAVS*LYQNWLSCQFSSIT Trigger: GGTAATAGAGGAGAACTGGCAGCTGAGCCAGTTCTGGTACAGTCAGGACACTGCTTTGCGACTTGCACGGGAAGCGATCGATGCTGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022518.8 ENSMUST00000239099.2 |
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| CDS GCA 90 bp | GTGTTCCGGAATAAACTTGCACATCTTCACACCCAGGAGCTGAGCTaGCTGCTCTTCCATGATGGCTCCTGTGCACAGCAGAATCTTGCC | + |
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Preference number: 5 (lower is better) Translates to: VFRNKLAHLHTQELS*LLFHDGSCAQQNLA Trigger: GGCAAGATTCTGCTGTGCACAGGAGCCATCATGGAAGAGCAGGCAGCTCAGCTCCTGGGTGTGAAGATGTGCAAGTTTATTCCGGAACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022518.8 ENSMUST00000239099.2 |
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| CDS-3UTR CAA 90 bp | CCAGGGCAGAGAAAGGGGGAGGTCACAATGTTTCCACAGAACGAGAACTGGGAATGTTCCGGAATAAACTaGCACATCTTCACACCCAGG | + |
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Preference number: 5 (lower is better) Translates to: PGQRKGEVTMFPQNENWECSGIN*HIFTPR Trigger: CCTGGGTGTGAAGATGTGCAAGTTTATTCCGGAACA...TTCCCAGTTCTCGTTCTGTGGAAACATTGTGACCTCCCCCTTTCTCTGCCCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022518.8 ENSMUST00000239099.2 |
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| CDS TCA 90 bp | GAATCTTGCCCCGAGTCAGAAACTGGATCGTTTCAGATGTCTTCCTaGGACATTCCTCAGACAGGTAAGGAGGGTCTGCAACCACAAGGT | + |
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Preference number: 5 (lower is better) Translates to: ESCPESETGSFQMSS*DIPQTGKEGLQPQG Trigger: ACCTTGTGGTTGCAGACCCTCCTTACCTGTCTGAGGAATGTCTCAGGAAGACATCTGAAACGATCCAGTTTCTGACTCGGGGCAAGATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022518.8 ENSMUST00000239099.2 |
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| CDS-3UTR CAA 90 bp | AACGAGAACTGGGAAATGAATGTGGAGTCCTCTATGGAACTGCTGCCATGTGAATGTTCCGGAATAAACTaGCACATCTTCACACCCAGG | + |
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Preference number: 5 (lower is better) Translates to: NENWEMNVESSMELLPCECSGIN*HIFTPR Trigger: CCTGGGTGTGAAGATGTGCAAGTTTATTCCGGAACA...TTCACATGGCAGCAGTTCCATAGAGGACTCCACATTCATTTCCCAGTTCTCGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022518.8 ENSMUST00000239099.2 |
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| CDS GCA 72 bp | TCTGGTACACGCTTGGCGCGCTCACACACGCGATTCTaGCTCCTTCTCCAGCAGCATCGATCGCTTCCCGTG | + |
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Preference number: 6 (lower is better) Translates to: SGTRLARSHTRF*LLLQQHRSLPV Trigger: CACGGGAAGCGATCGATGCTGCTGGAGAAGGAGGCAGAATCGCGTGTGTGAGCGCGCCAAGCGTGTACCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022518.8 ENSMUST00000239099.2 |
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| CDS CCA 72 bp | TTCCCTACAGAGCTCCCGGAGCTTCTGGTACACGCTTaGCGCGCTCACACACGCGATTCTGCCTCCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: FPTELPELLVHA*RAHTRDSASFS Trigger: GGAGAAGGAGGCAGAATCGCGTGTGTGAGCGCGCCAAGCGTGTACCAGAAGCTCCGGGAGCTCTGTAGGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022518.8 ENSMUST00000239099.2 |
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| CDS CAA 72 bp | CTTCCCTACAGAGCTCCCGGAGCTTCTGGTACACGCTaGGCGCGCTCACACACGCGATTCTGCCTCCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: LPYRAPGASGTR*ARSHTRFCLLL Trigger: GAGAAGGAGGCAGAATCGCGTGTGTGAGCGCGCCAAGCGTGTACCAGAAGCTCCGGGAGCTCTGTAGGGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022518.8 ENSMUST00000239099.2 |
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| CDS CAA 90 bp | CAGAGCTGTCTTCCCTACAGAGCTCCCGGAGCTTCTGGTACACGCTaGGCGCGCTCACACACGCGATTCTGCCTCCTTCTCCAGCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: QSCLPYRAPGASGTR*ARSHTRFCLLLQQH Trigger: ATGCTGCTGGAGAAGGAGGCAGAATCGCGTGTGTGAGCGCGCCAAGCGTGTACCAGAAGCTCCGGGAGCTCTGTAGGGAAGACAGCTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022518.8 ENSMUST00000239099.2 |
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| CDS CCA 72 bp | ACAGAGCTGTCTTCCCTACAGAGCTCCCGGAGCTTCTaGTACACGCTTGGCGCGCTCACACACGCGATTCTG | + |
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Preference number: 6 (lower is better) Translates to: TELSSLQSSRSF*YTLGALTHAIL Trigger: CAGAATCGCGTGTGTGAGCGCGCCAAGCGTGTACCAGAAGCTCCGGGAGCTCTGTAGGGAAGACAGCTCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022518.8 ENSMUST00000239099.2 |
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| CDS TCA 72 bp | TCGATCGCTTCCCGTGCAAGTCGCAAAGCAGTGTCCTaGCTGTACCAGAACTGGCTCAGCTGCCAGTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: SIASRASRKAVS*LYQNWLSCQFS Trigger: GGAGAACTGGCAGCTGAGCCAGTTCTGGTACAGTCAGGACACTGCTTTGCGACTTGCACGGGAAGCGATCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022518.8 ENSMUST00000239099.2 |
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| CDS GCA 72 bp | TCTGCCTCCTTCTCCAGCAGCATCGATCGCTTCCCGTaGAAGTCGCAAAGCAGTGTCCTGACTGTACCAGAA | + |
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Preference number: 6 (lower is better) Translates to: SASFSSSIDRFP*KSQSSVLTVPE Trigger: TTCTGGTACAGTCAGGACACTGCTTTGCGACTTGCACGGGAAGCGATCGATGCTGCTGGAGAAGGAGGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022518.8 ENSMUST00000239099.2 |
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| CDS TCA 72 bp | GGTATGGGAAGAGAGCTGGGGTATGTCGTCGTCTTCTaGCTCACTCATTTCACAAAGTGTCTGCGACCACTG | + |
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Preference number: 6 (lower is better) Translates to: GMGRELGYVVVF*LTHFTKCLRPL Trigger: CAGTGGTCGCAGACACTTTGTGAAATGAGTGAGTCAGAAGACGACGACATACCCCAGCTCTCTTCCCATACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022518.8 |
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| CDS TCA 72 bp | CCCGAGTCAGAAACTGGATCGTTTCAGATGTCTTCCTaGGACATTCCTCAGACAGGTAAGGAGGGTCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: PESETGSFQMSS*DIPQTGKEGLQ Trigger: TTGCAGACCCTCCTTACCTGTCTGAGGAATGTCTCAGGAAGACATCTGAAACGATCCAGTTTCTGACTCGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022518.8 ENSMUST00000239099.2 |
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| CDS CCA 72 bp | AACTCCTGGAGAGCTGCTAAGGTATGGGAAGAGAGCTaGGGTATGTCGTCGTCTTCTGACTCACTCATTTCA | + |
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Preference number: 6 (lower is better) Translates to: NSWRAAKVWEES*GMSSSSDSLIS Trigger: TGAAATGAGTGAGTCAGAAGACGACGACATACCCCAGCTCTCTTCCCATACCTTAGCAGCTCTCCAGGAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022518.8 |
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| CDS CCA 72 bp | CCTGTGCACAGCAGAATCTTGCCCCGAGTCAGAAACTaGATCGTTTCAGATGTCTTCCTGAGACATTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: PVHSRILPRVRN*IVSDVFLRHSS Trigger: TGAGGAATGTCTCAGGAAGACATCTGAAACGATCCAGTTTCTGACTCGGGGCAAGATTCTGCTGTGCACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022518.8 ENSMUST00000239099.2 |
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| CDS CCA 72 bp | AAAGCTATGCGCAGCGATTCTCTCAGGCAACTCCAGTaGATGGTTGTAATCATAGAAGATAAATTCATCCCC | + |
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Preference number: 6 (lower is better) Translates to: KAMRSDSLRQLQ*MVVIIEDKFIP Trigger: GGGGATGAATTTATCTTCTATGATTACAACCATCCACTGGAGTTGCCTGAGAGAATCGCTGCGCATAGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022518.8 ENSMUST00000239099.2 |
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