Pregenerated sensors for EEF1A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000016349Ensembl transcript IDs: ENSMUST00000055990.8
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CGGGCACTGAGCGTGGTGAGCGCTGGCGCGGAAGCCTGGGGCGGGGGCGCTTTTATTTCCACTGGACTTTaGTGGCGAGCATCCAGTCGC | + |
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Preference number: 2 (lower is better) Translates to: RALSVVSAGAEAWGGGAFISTGL*WRASSR Trigger: GCGACTGGATGCTCGCCATCAAAGTCCAGTGGAAAT...AAAAGCGCCCCCGCCCCAGGCTTCCGCGCCAGCGCTCACCACGCTCAGTGCCCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGGGGTCGCTCAGTTTATTGGGAAAACGGGCACTGAGCGTGGTGAGCGCTGGGCGGAGGTGCAGACATaGGCCTGGCAGGGGGTCGGG | + |
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Preference number: 2 (lower is better) Translates to: SGVAQFIGKTGTERGERWAEVQT*AWQGVG Trigger: CCCGACCCCCTGCCAGGCGCATGTCTGCACCTCCGC...CCAGCGCTCACCACGCTCAGTGCCCGTTTTCCCAATAAACTGAGCGACCCCAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGGGGTCGCTCAGTTTATTGGGAAAACGGGCACTGAGCGTGGTGAGCGCTGGGTGCAGACATGCGCCTaGCAGGGGGTCGGGGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: SGVAQFIGKTGTERGERWVQTCA*QGVGAE Trigger: CTCTGCCCCGACCCCCTGCCAGGCGCATGTCTGCAC...CCAGCGCTCACCACGCTCAGTGCCCGTTTTCCCAATAAACTGAGCGACCCCAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| 3UTR-3UTR CCA 90 bp | CGGGCACTGAGCGTGGTGAGCGCTGGCGCGGAAGCCTGGGGCGGGGGCGCTTTTTTGAAGAATTTCCACTaGACTTTGATGGCGAGCATC | + |
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Preference number: 2 (lower is better) Translates to: RALSVVSAGAEAWGGGAFLKNFH*TLMASI Trigger: GATGCTCGCCATCAAAGTCCAGTGGAAATTCTTCAA...AAAAGCGCCCCCGCCCCAGGCTTCCGCGCCAGCGCTCACCACGCTCAGTGCCCG 61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| 3UTR CCA 72 bp | CGGGCACTGAGCGTGGTGAGCGCTGGCGCGGAAGCCTaGGGCGGGGGCGCTTTTCCTCTTGAAGAATTTCCA | + |
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Preference number: 3 (lower is better) Translates to: RALSVVSAGAEA*GGGAFPLEEFP Trigger: TGGAAATTCTTCAAGAGGAAAAGCGCCCCCGCCCCAGGCTTCCGCGCCAGCGCTCACCACGCTCAGTGCCCG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| 3UTR-3UTR CAA 90 bp | TTGGGAAAACGGGCACTGAGCGTGGTGAGCGCTGGCGCGGAAGCCTGGGGCGGGAATTTCCACTGGACTTaGATGGCGAGCATCCAGTCG | + |
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Preference number: 3 (lower is better) Translates to: LGKRALSVVSAGAEAWGGNFHWT*MASIQS Trigger: CGACTGGATGCTCGCCATCAAAGTCCAGTGGAAATT...CCCGCCCCAGGCTTCCGCGCCAGCGCTCACCACGCTCAGTGCCCGTTTTCCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| CDS-3UTR GCA 90 bp | CGGGCACTGAGCGTGGTGAGCGCTGGCGCGGAAGCCTGGGGCGGGGGCGCTTTTCTCGCCCACACCGGCTaGCACGATCAGCACTGCGCA | + |
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Preference number: 4 (lower is better) Translates to: RALSVVSAGAEAWGGGAFLAHTG*HDQHCA Trigger: TGCGCAGTGCTGATCGTGGCAGCCGGTGTGGGCGAG...AAAAGCGCCCCCGCCCCAGGCTTCCGCGCCAGCGCTCACCACGCTCAGTGCCCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| CDS-3UTR GCA 90 bp | GAGCCTCTTACAAGCGGAGGTGCAGACATGCGCCTGGCAGGGGGTCGGGGCAGACCCACGGCCACAGTCTaGCGCATGTCGCGCACGGCG | + |
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Preference number: 4 (lower is better) Translates to: EPLTSGGADMRLAGGRGRPTATV*RMSRTA Trigger: CGCCGTGCGCGACATGCGGCAGACTGTGGCCGTGGG...TCTGCCCCGACCCCCTGCCAGGCGCATGTCTGCACCTCCGCTTGTAAGAGGCTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| CDS-3UTR CCA 90 bp | GGGAAAACGGGCACTGAGCGTGGTGAGCGCTGGCGCGGAAGCCTGGGGCGGGGGGCACGAAGGGCACCGTaGCTGGGTTGTAGCCGATCT | + |
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Preference number: 4 (lower is better) Translates to: GKTGTERGERWRGSLGRGARRAP*LGCSRS Trigger: AGATCGGCTACAACCCAGCCACGGTGCCCTTCGTGC...CCCCCGCCCCAGGCTTCCGCGCCAGCGCTCACCACGCTCAGTGCCCGTTTTCCC 69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| CDS-3UTR TCA 90 bp | CGGGCACTGAGCGTGGTGAGCGCTGGCGCGGAAGCCTGGGGCGGGGGCGCTTTTCACCACACTTGTAGATaGGGTGGCCTGTCGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: RALSVVSAGAEAWGGGAFHHTCR*GGLSWW Trigger: CCACCACGACAGGCCACCTCATCTACAAGTGTGGTG...AAAAGCGCCCCCGCCCCAGGCTTCCGCGCCAGCGCTCACCACGCTCAGTGCCCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| CDS-3UTR GCA 90 bp | GAGCCTCTTACAAGCGGAGGTGCAGACATGCGCCTGGCAGGGGGTCGGGGCAGATGCCACGATCAGCACTaGGCAGTCCGCCTGGGATGT | + |
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Preference number: 4 (lower is better) Translates to: EPLTSGGADMRLAGGRGRCHDQH*AVRLGC Trigger: ACATCCCAGGCGGACTGCGCAGTGCTGATCGTGGCA...TCTGCCCCGACCCCCTGCCAGGCGCATGTCTGCACCTCCGCTTGTAAGAGGCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| CDS-3UTR GCA 90 bp | GTAGAGCCTCTTACAAGCGGAGGTGCAGACATGCGCCTGGCAGGGGGTCGGGGCGAGGCGGGTCAGCTTTaGTGTCCCCGCAGACATTGC | + |
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Preference number: 4 (lower is better) Translates to: VEPLTSGGADMRLAGGRGEAGQL*CPRRHC Trigger: GCAATGTCTGCGGGGACAGCAAAGCTGACCCGCCTC...GCCCCGACCCCCTGCCAGGCGCATGTCTGCACCTCCGCTTGTAAGAGGCTCTAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| CDS-3UTR TCA 90 bp | CAGGGCCCCAGCAGTAGGCACACACGGCTCTGGGGTCGCTCAGTTTATTGGGAAGGGAGATGTCGATGGTaGTGCCTCGTTCCCGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: QGPSSRHTRLWGRSVYWEGRCRW*CLVPAR Trigger: CCGAGCGGGAACGAGGCATCACCATCGACATCTCCC...TTCCCAATAAACTGAGCGACCCCAGAGCCGTGTGTGCCTACTGCTGGGGCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| CDS-3UTR TCA 90 bp | ATTGGGAAAACGGGCACTGAGCGTGGTGAGCGCTGGCGCGGAAGCCTGGGGCGGTTCAGGATGATAACCTaGGAGGTGAACTGGGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: IGKTGTERGERWRGSLGRFRMIT*EVNWAA Trigger: GGCTGCCCAGTTCACCTCTCAGGTTATCATCCTGAA...CCGCCCCAGGCTTCCGCGCCAGCGCTCACCACGCTCAGTGCCCGTTTTCCCAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| CDS-3UTR TCA 90 bp | CAGGGCCCCAGCAGTAGGCACACACGGCTCTGGGGTCGCTCAGTTTATTGGGAAGCGAGTAGCCAGCGCTaGTTTGCCCAGGGTGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: QGPSSRHTRLWGRSVYWEASSQR*FAQGGS Trigger: TGAACCACCCTGGGCAAATCAGCGCTGGCTACTCGC...TTCCCAATAAACTGAGCGACCCCAGAGCCGTGTGTGCCTACTGCTGGGGCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| CDS-3UTR TCA 90 bp | CAGGGCCCCAGCAGTAGGCACACACGGCTCTGGGGTCGCTCAGTTTATTGGGAAGCAATGTGGGCCGTGTaGCAGTCGATGACTGGCGAG | + |
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Preference number: 4 (lower is better) Translates to: QGPSSRHTRLWGRSVYWEAMWAV*QSMTGE Trigger: CTCGCCAGTCATCGACTGTCACACGGCCCACATTGC...TTCCCAATAAACTGAGCGACCCCAGAGCCGTGTGTGCCTACTGCTGGGGCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| CDS-3UTR CCA 90 bp | GAGCCTCTTACAAGCGGAGGTGCAGACATGCGCCTGGCAGGGGGTCGGGGCAGACTTCTCGCTGTAGGCTaGTTCCGTGGAGTCCATCTT | + |
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Preference number: 4 (lower is better) Translates to: EPLTSGGADMRLAGGRGRLLAVG*FRGVHL Trigger: AAGATGGACTCCACGGAACCAGCCTACAGCGAGAAG...TCTGCCCCGACCCCCTGCCAGGCGCATGTCTGCACCTCCGCTTGTAAGAGGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| CDS-3UTR CCA 90 bp | GACGTAGAGCCTCTTACAAGCGGAGGTGCAGACATGCGCCTGGCAGGGGGTCGGGAAGGGCACCGTGGCTaGGTTGTAGCCGATCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: DVEPLTSGGADMRLAGGREGHRG*VVADLL Trigger: AAGAAGATCGGCTACAACCCAGCCACGGTGCCCTTC...CCGACCCCCTGCCAGGCGCATGTCTGCACCTCCGCTTGTAAGAGGCTCTACGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| CDS-3UTR CCA 90 bp | TTGGGAAAACGGGCACTGAGCGTGGTGAGCGCTGGCGCGGAAGCCTGGGGCGGGTCGCTAAGTGCCTCATaGTGCATTTCCACAGACTTC | + |
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Preference number: 4 (lower is better) Translates to: LGKRALSVVSAGAEAWGGSLSAS*CISTDF Trigger: GAAGTCTGTGGAAATGCACCATGAGGCACTTAGCGA...CCCGCCCCAGGCTTCCGCGCCAGCGCTCACCACGCTCAGTGCCCGTTTTCCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| CDS-3UTR TCA 90 bp | CCCAGCAGTAGGCACACACGGCTCTGGGGTCGCTCAGTTTATTGGGAAAACGGGCACTTGCCCGCTTTCTaGGCCTTCTGTGCGGACTTG | + |
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Preference number: 4 (lower is better) Translates to: PSSRHTRLWGRSVYWENGHLPAF*AFCADL Trigger: CAAGTCCGCACAGAAGGCTCAGAAAGCGGGCAAGTG...CCCGTTTTCCCAATAAACTGAGCGACCCCAGAGCCGTGTGTGCCTACTGCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| CDS-3UTR GCA 90 bp | CAGGGCCCCAGCAGTAGGCACACACGGCTCTGGGGTCGCTCAGTTTATTGGGAACAGGGACACGCCGCTTaGATTTCCTTCCTTACGCTC | + |
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Preference number: 4 (lower is better) Translates to: QGPSSRHTRLWGRSVYWEQGHAA*ISFLTL Trigger: GAGCGTAAGGAAGGAAATGCAAGCGGCGTGTCCCTG...TTCCCAATAAACTGAGCGACCCCAGAGCCGTGTGTGCCTACTGCTGGGGCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| CDS-3UTR GCA 90 bp | CTGGACTTTGATGGCGAGCATCCAGTCGCTGACGTAGAGCCTCTTACAAGCGGACTTGGTGACCTTGCCTaGGCCGCCGCTCTTCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: LDFDGEHPVADVEPLTSGLGDLA*AAALLL Trigger: GAGAAGAAGAGCGGCGGCGCAGGCAAGGTCACCAAG...TCCGCTTGTAAGAGGCTCTACGTCAGCGACTGGATGCTCGCCATCAAAGTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| CDS-3UTR CCA 90 bp | CCCAGCAGTAGGCACACACGGCTCTGGGGTCGCTCAGTTTATTGGGAAAACGGGGTGACAGTCGATGACTaGCGAGTAGCCAGCGCTGAT | + |
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Preference number: 4 (lower is better) Translates to: PSSRHTRLWGRSVYWENGVTVDD*RVASAD Trigger: ATCAGCGCTGGCTACTCGCCAGTCATCGACTGTCAC...CCCGTTTTCCCAATAAACTGAGCGACCCCAGAGCCGTGTGTGCCTACTGCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| CDS-3UTR GCA 90 bp | CACACGGCTCTGGGGTCGCTCAGTTTATTGGGAAAACGGGCACTGAGCGTGGTGTTAGCTCGGCAAACTTaGAGGCAATGTGGGCCGTGT | + |
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Preference number: 4 (lower is better) Translates to: HTALGSLSLLGKRALSVVLARQT*RQCGPC Trigger: ACACGGCCCACATTGCCTGCAAGTTTGCCGAGCTAA...CACCACGCTCAGTGCCCGTTTTCCCAATAAACTGAGCGACCCCAGAGCCGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| CDS-3UTR CCA 90 bp | TCTGGGGTCGCTCAGTTTATTGGGAAAACGGGCACTGAGCGTGGTGAGCGCTGGCAGACTTCAGGGACTTaGGGTTATCCTCCAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: SGVAQFIGKTGTERGERWQTSGT*GYPPAS Trigger: AGAAGCTGGAGGATAACCCCAAGTCCCTGAAGTCTG...CCAGCGCTCACCACGCTCAGTGCCCGTTTTCCCAATAAACTGAGCGACCCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| CDS-3UTR GCA 90 bp | CACACGGCTCTGGGGTCGCTCAGTTTATTGGGAAAACGGGCACTGAGCGTGGTGCTAAGTGCCTCATGGTaGATTTCCACAGACTTCACC | + |
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Preference number: 4 (lower is better) Translates to: HTALGSLSLLGKRALSVVLSASW*ISTDFT Trigger: GGTGAAGTCTGTGGAAATGCACCATGAGGCACTTAG...CACCACGCTCAGTGCCCGTTTTCCCAATAAACTGAGCGACCCCAGAGCCGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| CDS-3UTR TCA 90 bp | TCTGGGGTCGCTCAGTTTATTGGGAAAACGGGCACTGAGCGTGGTGAGCGCTGGACACATTCTTCACATTaGACCCGACATTGTCACCAG | + |
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Preference number: 4 (lower is better) Translates to: SGVAQFIGKTGTERGERWTHSSH*TRHCHQ Trigger: CTGGTGACAATGTCGGGTTCAATGTGAAGAATGTGT...CCAGCGCTCACCACGCTCAGTGCCCGTTTTCCCAATAAACTGAGCGACCCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| CDS-3UTR CAA 90 bp | TTGGGAAAACGGGCACTGAGCGTGGTGAGCGCTGGCGCGGAAGCCTGGGGCGGGCCTGTCGTGGTGGACTaGCCTGAGTCCACGTGGCCA | + |
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Preference number: 5 (lower is better) Translates to: LGKRALSVVSAGAEAWGGPVVVD*PESTWP Trigger: TGGCCACGTGGACTCAGGCAAGTCCACCACGACAGG...CCCGCCCCAGGCTTCCGCGCCAGCGCTCACCACGCTCAGTGCCCGTTTTCCCAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| CDS-3UTR CAA 90 bp | GGGAAAACGGGCACTGAGCGTGGTGAGCGCTGGCGCGGAAGCCTGGGGCGGGGGTTTAGCTCGGCAAACTaGCAGGCAATGTGGGCCGTG | + |
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Preference number: 5 (lower is better) Translates to: GKTGTERGERWRGSLGRGFSSAN*QAMWAV Trigger: CACGGCCCACATTGCCTGCAAGTTTGCCGAGCTAAA...CCCCCGCCCCAGGCTTCCGCGCCAGCGCTCACCACGCTCAGTGCCCGTTTTCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| CDS-3UTR CAA 90 bp | CACACGGCTCTGGGGTCGCTCAGTTTATTGGGAAAACGGGCACTGAGCGTGGTGGGCAGACGAAGGGGCTaGTCAGTGGGGCGGGTGGGG | + |
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Preference number: 5 (lower is better) Translates to: HTALGSLSLLGKRALSVVGRRRG*SVGRVG Trigger: CCCCACCCGCCCCACTGACAAGCCCCTTCGTCTGCC...CACCACGCTCAGTGCCCGTTTTCCCAATAAACTGAGCGACCCCAGAGCCGTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| CDS-3UTR CAA 90 bp | CCCAGCAGTAGGCACACACGGCTCTGGGGTCGCTCAGTTTATTGGGAAAACGGGGCGGACTTGGTGACCTaGCCTGCGCCGCCGCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: PSSRHTRLWGRSVYWENGADLVT*PAPPLF Trigger: GAAGAGCGGCGGCGCAGGCAAGGTCACCAAGTCCGC...CCCGTTTTCCCAATAAACTGAGCGACCCCAGAGCCGTGTGTGCCTACTGCTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| CDS-3UTR CAA 90 bp | GACGTAGAGCCTCTTACAAGCGGAGGTGCAGACATGCGCCTGGCAGGGGGTCGGACATTGAACCCGACATaGTCACCAGGCAGGGCCTCG | + |
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Preference number: 5 (lower is better) Translates to: DVEPLTSGGADMRLAGGRTLNPT*SPGRAS Trigger: CGAGGCCCTGCCTGGTGACAATGTCGGGTTCAATGT...CCGACCCCCTGCCAGGCGCATGTCTGCACCTCCGCTTGTAAGAGGCTCTACGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| CDS-3UTR CAA 90 bp | GAGCCTCTTACAAGCGGAGGTGCAGACATGCGCCTGGCAGGGGGTCGGGGCAGATTCTTCTCCACGTTCTaGATGACGCCCACGGCCACA | + |
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Preference number: 5 (lower is better) Translates to: EPLTSGGADMRLAGGRGRFFSTF*MTPTAT Trigger: TGTGGCCGTGGGCGTCATCAAGAACGTGGAGAAGAA...TCTGCCCCGACCCCCTGCCAGGCGCATGTCTGCACCTCCGCTTGTAAGAGGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| CDS-3UTR CAA 90 bp | TCTGGGGTCGCTCAGTTTATTGGGAAAACGGGCACTGAGCGTGGTGAGCGCTGGCGGGTTTGCCCGTTCTaGGAGATGCCCGCCTCAAAC | + |
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Preference number: 5 (lower is better) Translates to: SGVAQFIGKTGTERGERWRVCPF*EMPASN Trigger: GTTTGAGGCGGGCATCTCCAAGAACGGGCAAACCCG...CCAGCGCTCACCACGCTCAGTGCCCGTTTTCCCAATAAACTGAGCGACCCCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| CDS-3UTR CAA 90 bp | GAGCCTCTTACAAGCGGAGGTGCAGACATGCGCCTGGCAGGGGGTCGGGGCAGATTATCCTCCAGCTTCTaGCCAGAACGACGGTCAATC | + |
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Preference number: 5 (lower is better) Translates to: EPLTSGGADMRLAGGRGRLSSSF*PERRSI Trigger: GATTGACCGTCGTTCTGGCAAGAAGCTGGAGGATAA...TCTGCCCCGACCCCCTGCCAGGCGCATGTCTGCACCTCCGCTTGTAAGAGGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| CDS-3UTR CAA 90 bp | TCTGGGGTCGCTCAGTTTATTGGGAAAACGGGCACTGAGCGTGGTGAGCGCTGGGCAGGGACACGCCGCTaGCATTTCCTTCCTTACGCT | + |
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Preference number: 5 (lower is better) Translates to: SGVAQFIGKTGTERGERWAGTRR*HFLPYA Trigger: AGCGTAAGGAAGGAAATGCAAGCGGCGTGTCCCTGC...CCAGCGCTCACCACGCTCAGTGCCCGTTTTCCCAATAAACTGAGCGACCCCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| CDS-3UTR CAA 90 bp | CACACGGCTCTGGGGTCGCTCAGTTTATTGGGAAAACGGGCACTGAGCGTGGTGACCTCTGTGGTGATGTaGACTGGCGCAAAGGTCACC | + |
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Preference number: 5 (lower is better) Translates to: HTALGSLSLLGKRALSVVTSVVM*TGAKVT Trigger: GGTGACCTTTGCGCCAGTCAACATCACCACAGAGGT...CACCACGCTCAGTGCCCGTTTTCCCAATAAACTGAGCGACCCCAGAGCCGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| CDS-3UTR CAA 90 bp | CCCAGCAGTAGGCACACACGGCTCTGGGGTCGCTCAGTTTATTGGGAAAACGGGTCCGTGGAGTCCATCTaGTTGACACCCACAATGAGC | + |
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Preference number: 5 (lower is better) Translates to: PSSRHTRLWGRSVYWENGSVESI*LTPTMS Trigger: GCTCATTGTGGGTGTCAACAAGATGGACTCCACGGA...CCCGTTTTCCCAATAAACTGAGCGACCCCAGAGCCGTGTGTGCCTACTGCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| CDS GCA 72 bp | TTCTCCACGTTCTTGATGACGCCCACGGCCACAGTCTaGCGCATGTCGCGCACGGCGAAGCGGCCGAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: FSTFLMTPTATV*RMSRTAKRPRG Trigger: ACCTCTCGGCCGCTTCGCCGTGCGCGACATGCGGCAGACTGTGGCCGTGGGCGTCATCAAGAACGTGGAGAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| CDS CAA 72 bp | ACCTTGCCTGCGCCGCCGCTCTTCTTCTCCACGTTCTaGATGACGCCCACGGCCACAGTCTGCCGCATGTCG | + |
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Preference number: 6 (lower is better) Translates to: TLPAPPLFFSTF*MTPTATVCRMS Trigger: CGACATGCGGCAGACTGTGGCCGTGGGCGTCATCAAGAACGTGGAGAAGAAGAGCGGCGGCGCAGGCAAGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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| CDS CCA 72 bp | CTTAACAATCTCATCATAGCGCTTCTCGCTGTAGGCTaGTTCCGTGGAGTCCATCTTGTTGACACCCACAAT | + |
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Preference number: 6 (lower is better) Translates to: LNNLIIALLAVG*FRGVHLVDTHN Trigger: ATTGTGGGTGTCAACAAGATGGACTCCACGGAACCAGCCTACAGCGAGAAGCGCTATGATGAGATTGTTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055990.8 |
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