Pregenerated sensors for EDNRB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022122Ensembl transcript IDs: ENSMUST00000022718.11, ENSMUST00000172237.2, ENSMUST00000227824.2
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCGCTTTGTTTTGCTGGAGCCGAACCAGGACCTTTCACACCGACATaGCGTGGCAGTGACGAACACAGGGCTAAGAATGGGAATATTTCC | + |
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Preference number: 1 (lower is better) Translates to: ALCFAGAEPGPFTPT*RGSDEHRAKNGNIS Trigger: GGAAATATTCCCATTCTTAGCCCTGTGTTCGTCACTGCCACGTCATGTCGGTGTGAAAGGTCCTGGTTCGGCTCCAGCAAAACAAAGCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
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| 3UTR GCA 90 bp | CATATTGTGCTGTGGACCATTTTCTCTACAGCATGGCTGAAAGGATaGTCCCTGCTTCTTTGCCATGTGGACACTGCACCGGGCAATTCA | + |
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Preference number: 1 (lower is better) Translates to: HIVLWTIFSTAWLKG*SLLLCHVDTAPGNS Trigger: TGAATTGCCCGGTGCAGTGTCCACATGGCAAAGAAGCAGGGAGCATCCTTTCAGCCATGCTGTAGAGAAAATGGTCCACAGCACAATATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 |
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| 3UTR GCA 90 bp | GGGTTACTGGCATCTCTTTGTCAGAAAGCTACGAACGCTGGGACCTaGCCTTTGTTAAGTCCTCTACGTGTAGTGCTTATAGCTAATAGC | + |
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Preference number: 1 (lower is better) Translates to: GLLASLCQKATNAGT*PLLSPLRVVLIANS Trigger: GCTATTAGCTATAAGCACTACACGTAGAGGACTTAACAAAGGGCAGGTCCCAGCGTTCGTAGCTTTCTGACAAAGAGATGCCAGTAACCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 |
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| 3UTR CCA 90 bp | TATAACCGGGTTACTGGCATCTCTTTGTCAGAAAGCTACGAACGCTaGGACCTGCCCTTTGTTAAGTCCTCTACGTGTAGTGCTTATAGC | + |
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Preference number: 1 (lower is better) Translates to: YNRVTGISLSESYER*DLPFVKSSTCSAYS Trigger: GCTATAAGCACTACACGTAGAGGACTTAACAAAGGGCAGGTCCCAGCGTTCGTAGCTTTCTGACAAAGAGATGCCAGTAACCCGGTTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 |
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| 3UTR CCA 90 bp | TATTTTCGCTATCATATTGTGCTGTGGACCATTTTCTCTACAGCATaGCTGAAAGGATGCTCCCTGCTTCTTTGCCATGTGGACACTGCA | + |
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Preference number: 1 (lower is better) Translates to: YFRYHIVLWTIFSTA*LKGCSLLLCHVDTA Trigger: TGCAGTGTCCACATGGCAAAGAAGCAGGGAGCATCCTTTCAGCCATGCTGTAGAGAAAATGGTCCACAGCACAATATGATAGCGAAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 |
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| 3UTR CCA 90 bp | TTCTATGGCGTTAAACCACGGTATTTTCGCTATCATATTGTGCTGTaGACCATTTTCTCTACAGCATGGCTGAAAGGATGCTCCCTGCTT | + |
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Preference number: 1 (lower is better) Translates to: FYGVKPRYFRYHIVL*TIFSTAWLKGCSLL Trigger: AAGCAGGGAGCATCCTTTCAGCCATGCTGTAGAGAAAATGGTCCACAGCACAATATGATAGCGAAAATACCGTGGTTTAACGCCATAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 |
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| 3UTR-3UTR TCA 90 bp | CGAGTCACGCTGAGAACGCTGCGCTTTGTTTTGCTGGAGCCGAACCAGGACCTTTCTCTACAGCATGGCTaGAAGGATGCTCCCTGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: RVTLRTLRFVLLEPNQDLSLQHG*KDAPCF Trigger: GAAGCAGGGAGCATCCTTTCAGCCATGCTGTAGAGA...AAGGTCCTGGTTCGGCTCCAGCAAAACAAAGCGCAGCGTTCTCAGCGTGACTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 |
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| 3UTR-3UTR GCA 90 bp | CGAGTCACGCTGAGAACGCTGCGCTTTGTTTTGCTGGAGCCGAACCAGGACCTTTTGCCATGTGGACACTaGACCGGGCAATTCACATTC | + |
|
Preference number: 2 (lower is better) Translates to: RVTLRTLRFVLLEPNQDLLPCGH*TGQFTF Trigger: GAATGTGAATTGCCCGGTGCAGTGTCCACATGGCAA...AAGGTCCTGGTTCGGCTCCAGCAAAACAAAGCGCAGCGTTCTCAGCGTGACTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 |
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| 3UTR CAA 90 bp | CCGGGCAATTCACATTCTGTCTATAACCGGGTTACTGGCATCTCTTaGTCAGAAAGCTACGAACGCTGGGACCTGCCCTTTGTTAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: PGNSHSVYNRVTGIS*SESYERWDLPFVKS Trigger: GGACTTAACAAAGGGCAGGTCCCAGCGTTCGTAGCTTTCTGACAAAGAGATGCCAGTAACCCGGTTATAGACAGAATGTGAATTGCCCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 |
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| 3UTR-3UTR GCA 90 bp | CGAGTCACGCTGAGAACGCTGCGCTTTGTTTTGCTGGAGCCGAACCAGGACCTTTGTTTTGCAATGTCATaGTTTCTTGAATCCAGATTC | + |
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Preference number: 2 (lower is better) Translates to: RVTLRTLRFVLLEPNQDLCFAMS*FLESRF Trigger: GAATCTGGATTCAAGAAAGCATGACATTGCAAAACA...AAGGTCCTGGTTCGGCTCCAGCAAAACAAAGCGCAGCGTTCTCAGCGTGACTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 |
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| 3UTR-3UTR GCA 90 bp | GTGGCAGTGACGAACACAGGGCTAAGAATGGGAATATTTCCCCACGGGCTTCCTTGTTTTGTGTCTTTCTaGAGAGTATGTGTGAGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: VAVTNTGLRMGIFPHGLPCFVSF*RVCVRE Trigger: TTCCCTCACACATACTCTGCAGAAAGACACAAAACA...AGGAAGCCCGTGGGGAAATATTCCCATTCTTAGCCCTGTGTTCGTCACTGCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 |
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| 3UTR-3UTR GCA 90 bp | GACGTGGCAGTGACGAACACAGGGCTAAGAATGGGAATATTTCCCCACGGGCTTTGTTTTGCAATGTCATaGTTTCTTGAATCCAGATTC | + |
|
Preference number: 2 (lower is better) Translates to: DVAVTNTGLRMGIFPHGLCFAMS*FLESRF Trigger: GAATCTGGATTCAAGAAAGCATGACATTGCAAAACA...AAGCCCGTGGGGAAATATTCCCATTCTTAGCCCTGTGTTCGTCACTGCCACGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 |
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| 3UTR-3UTR CCA 90 bp | CATTTTCAACATGTGGCCTGGGTTATGAAAAGAAGAGAAGAGAAGAGAAGAGAATGCTTCTTTGCCATGTaGACACTGCACCGGGCAATT | + |
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Preference number: 2 (lower is better) Translates to: HFQHVAWVMKRREEKRRECFFAM*TLHRAI Trigger: AATTGCCCGGTGCAGTGTCCACATGGCAAAGAAGCA...TTCTCTTCTCTTCTCTTCTCTTCTTTTCATAACCCAGGCCACATGTTGAAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 |
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| 3UTR-3UTR GCA 90 bp | CATTTTCAACATGTGGCCTGGGTTATGAAAAGAAGAGAAGAGAAGAGAAGAGAAAAACCTAGACAAGAATaGGCAAAGAGGAGGATCTTG | + |
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Preference number: 2 (lower is better) Translates to: HFQHVAWVMKRREEKRREKPRQE*AKRRIL Trigger: CAAGATCCTCCTCTTTGCGCATTCTTGTCTAGGTTT...TTCTCTTCTCTTCTCTTCTCTTCTTTTCATAACCCAGGCCACATGTTGAAAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTCCCGTTTGGGTTTATTGTATTGTCACAATGATTTTGGTAGAAAACTGCATCCCATGTTTTCTCTGTaGCATTCGCAGGCTGTCTTT | + |
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Preference number: 2 (lower is better) Translates to: LSRLGLLYCHNDFGRKLHPMFSL*HSQAVF Trigger: AAAGACAGCCTGCGAATGCCACAGAGAAAACATGGG...ATGCAGTTTTCTACCAAAATCATTGTGACAATACAATAAACCCAAACGGGACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 |
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| 3UTR-3UTR CCA 90 bp | CATTTTCAACATGTGGCCTGGGTTATGAAAAGAAGAGAAGAGAAGAGAAGAGAAGACCCCGAAGCAGTTTaGCTTCTACGTTTTAGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: HFQHVAWVMKRREEKRREDPEAV*LLRFRK Trigger: TTTTCTAAAACGTAGAAGCCAAACTGCTTCGGGGTC...TTCTCTTCTCTTCTCTTCTCTTCTTTTCATAACCCAGGCCACATGTTGAAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 |
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| 3UTR-3UTR CCA 90 bp | CATTTTCAACATGTGGCCTGGGTTATGAAAAGAAGAGAAGAGAAGAGAAGAGAATATCATATTGTGCTGTaGACCATTTTCTCTACAGCA | + |
|
Preference number: 2 (lower is better) Translates to: HFQHVAWVMKRREEKRREYHIVL*TIFSTA Trigger: TGCTGTAGAGAAAATGGTCCACAGCACAATATGATA...TTCTCTTCTCTTCTCTTCTCTTCTTTTCATAACCCAGGCCACATGTTGAAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 |
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| 3UTR CAA 90 bp | TTACCTCATTGTCCCGTTTGGGTTTATTGTATTGTCACAATGATTTaGGTAGAAAACTGCATTGTTAAGCTCATTTTCAACATGTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: LPHCPVWVYCIVTMI*VENCIVKLIFNMWP Trigger: AGGCCACATGTTGAAAATGAGCTTAACAATGCAGTTTTCTACCAAAATCATTGTGACAATACAATAAACCCAAACGGGACAATGAGGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
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| 3UTR-3UTR CAA 90 bp | TTCCCGAGTCACGCTGAGAACGCTGCGCTTTGTTTTGCTGGAGCCGAACCAGGAGCAAAGAGGAGGATCTaGCAGACCCCGAAGCAGTTT | + |
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Preference number: 3 (lower is better) Translates to: FPSHAENAALCFAGAEPGAKRRI*QTPKQF Trigger: AAACTGCTTCGGGGTCTGCAAGATCCTCCTCTTTGC...TCCTGGTTCGGCTCCAGCAAAACAAAGCGCAGCGTTCTCAGCGTGACTCGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 |
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| 3UTR TCA 72 bp | TTTGCTGGAGCCGAACCAGGACCTTTCACACCGACATaGCGTGGCAGTGACGAACACAGGGCTAAGAATGGG | + |
|
Preference number: 3 (lower is better) Translates to: FAGAEPGPFTPT*RGSDEHRAKNG Trigger: CCCATTCTTAGCCCTGTGTTCGTCACTGCCACGTCATGTCGGTGTGAAAGGTCCTGGTTCGGCTCCAGCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
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| 3UTR-3UTR CAA 90 bp | GACGTGGCAGTGACGAACACAGGGCTAAGAATGGGAATATTTCCCCACGGGCTTGCAAAGAGGAGGATCTaGCAGACCCCGAAGCAGTTT | + |
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Preference number: 3 (lower is better) Translates to: DVAVTNTGLRMGIFPHGLAKRRI*QTPKQF Trigger: AAACTGCTTCGGGGTCTGCAAGATCCTCCTCTTTGC...AAGCCCGTGGGGAAATATTCCCATTCTTAGCCCTGTGTTCGTCACTGCCACGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 |
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| 3UTR CCA 72 bp | GTTACTGGCATCTCTTTGTCAGAAAGCTACGAACGCTaGGACCTGCCCTTTGTTAAGTCCTCTACGTGTAGT | + |
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Preference number: 3 (lower is better) Translates to: VTGISLSESYER*DLPFVKSSTCS Trigger: ACTACACGTAGAGGACTTAACAAAGGGCAGGTCCCAGCGTTCGTAGCTTTCTGACAAAGAGATGCCAGTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 |
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| 3UTR-3UTR CAA 90 bp | GACGTGGCAGTGACGAACACAGGGCTAAGAATGGGAATATTTCCCCACGGGCTTCAGAACGCCTTTCTATaGGCTATTTTCAGGAATAAC | + |
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Preference number: 3 (lower is better) Translates to: DVAVTNTGLRMGIFPHGLQNAFL*AIFRNN Trigger: GTTATTCCTGAAAATAGCCAATAGAAAGGCGTTCTG...AAGCCCGTGGGGAAATATTCCCATTCTTAGCCCTGTGTTCGTCACTGCCACGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 |
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| 3UTR CCA 72 bp | GTTAAACCACGGTATTTTCGCTATCATATTGTGCTGTaGACCATTTTCTCTACAGCATGGCTGAAAGGATGC | + |
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Preference number: 3 (lower is better) Translates to: VKPRYFRYHIVL*TIFSTAWLKGC Trigger: GCATCCTTTCAGCCATGCTGTAGAGAAAATGGTCCACAGCACAATATGATAGCGAAAATACCGTGGTTTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 |
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| 3UTR-3UTR CAA 90 bp | CATTTTCAACATGTGGCCTGGGTTATGAAAAGAAGAGAAGAGAAGAGAAGAGAACTCTTCAGTTTTCTCTaGGGCATTCTTTCACACACC | + |
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Preference number: 3 (lower is better) Translates to: HFQHVAWVMKRREEKRRELFSFL*GILSHT Trigger: GGTGTGTGAAAGAATGCCCAAGAGAAAACTGAAGAG...TTCTCTTCTCTTCTCTTCTCTTCTTTTCATAACCCAGGCCACATGTTGAAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
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| 3UTR-3UTR CAA 90 bp | TTGTCCCGTTTGGGTTTATTGTATTGTCACAATGATTTTGGTAGAAAACTGCATCAGAACGCCTTTCTATaGGCTATTTTCAGGAATAAC | + |
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Preference number: 3 (lower is better) Translates to: LSRLGLLYCHNDFGRKLHQNAFL*AIFRNN Trigger: GTTATTCCTGAAAATAGCCAATAGAAAGGCGTTCTG...ATGCAGTTTTCTACCAAAATCATTGTGACAATACAATAAACCCAAACGGGACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 |
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| CDS-3UTR TCA 90 bp | CGAGTCACGCTGAGAACGCTGCGCTTTGTTTTGCTGGAGCCGAACCAGGACCTTGCGTGGAGTTCCCGATaGTGCCTAGCACGAACACGA | + |
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Preference number: 4 (lower is better) Translates to: RVTLRTLRFVLLEPNQDLAWSSR*CLARTR Trigger: TCGTGTTCGTGCTAGGCATCATCGGGAACTCCACGC...AAGGTCCTGGTTCGGCTCCAGCAAAACAAAGCGCAGCGTTCTCAGCGTGACTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
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| CDS-3UTR TCA 90 bp | CGCTGCGCTTTGTTTTGCTGGAGCCGAACCAGGACCTTTCACACCGACATGACGGCGTGGAGTTCCCGATaGTGCCTAGCACGAACACGA | + |
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Preference number: 4 (lower is better) Translates to: RCALFCWSRTRTFHTDMTAWSSR*CLARTR Trigger: TCGTGTTCGTGCTAGGCATCATCGGGAACTCCACGC...CGTCATGTCGGTGTGAAAGGTCCTGGTTCGGCTCCAGCAAAACAAAGCGCAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
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| CDS-3UTR GCA 90 bp | GACCTTTCACACCGACATGACGTGGCAGTGACGAACACAGGGCTAAGAATGGGAGGTCACCTCCGCAGGTaGGGAGGAACGCATCAGACT | + |
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Preference number: 4 (lower is better) Translates to: DLSHRHDVAVTNTGLRMGGHLRR*GGTHQT Trigger: AGTCTGATGCGTTCCTCCGCACCTGCGGAGGTGACC...TCCCATTCTTAGCCCTGTGTTCGTCACTGCCACGTCATGTCGGTGTGAAAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
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| CDS-3UTR GCA 90 bp | GTGGCAGTGACGAACACAGGGCTAAGAATGGGAATATTTCCCCACGGGCTTCCTGGTCACCTCCGCAGGTaGGGAGGAACGCATCAGACT | + |
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Preference number: 4 (lower is better) Translates to: VAVTNTGLRMGIFPHGLPGHLRR*GGTHQT Trigger: AGTCTGATGCGTTCCTCCGCACCTGCGGAGGTGACC...AGGAAGCCCGTGGGGAAATATTCCCATTCTTAGCCCTGTGTTCGTCACTGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
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| CDS-3UTR CCA 90 bp | CGAGTCACGCTGAGAACGCTGCGCTTTGTTTTGCTGGAGCCGAACCAGGACCTTGCATCAGACTGGAGTTaGAACCTCTGGTCCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: RVTLRTLRFVLLEPNQDLASDWS*NLWSRR Trigger: CCTCCTGGACCAGAGGTTCCAACTCCAGTCTGATGC...AAGGTCCTGGTTCGGCTCCAGCAAAACAAAGCGCAGCGTTCTCAGCGTGACTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
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| CDS-3UTR TCA 90 bp | GTGGCAGTGACGAACACAGGGCTAAGAATGGGAATATTTCCCCACGGGCTTCCTAGGATCCGGCTGAGGTaGAGGGGAAGCCAACAGAGA | + |
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Preference number: 4 (lower is better) Translates to: VAVTNTGLRMGIFPHGLPRIRLR*RGSQQR Trigger: TCTCTGTTGGCTTCCCCTTCACCTCAGCCGGATCCT...AGGAAGCCCGTGGGGAAATATTCCCATTCTTAGCCCTGTGTTCGTCACTGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
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| CDS-3UTR TCA 90 bp | GACGTGGCAGTGACGAACACAGGGCTAAGAATGGGAATATTTCCCCACGGGCTTAGGATCCGGCTGAGGTaGAGGGGAAGCCAACAGAGA | + |
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Preference number: 4 (lower is better) Translates to: DVAVTNTGLRMGIFPHGLRIRLR*RGSQQR Trigger: TCTCTGTTGGCTTCCCCTTCACCTCAGCCGGATCCT...AAGCCCGTGGGGAAATATTCCCATTCTTAGCCCTGTGTTCGTCACTGCCACGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
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| CDS-3UTR CCA 90 bp | GGCTTGGTTTGTTCCCGAGTCACGCTGAGAACGCTGCGCTTTGTTTTGCTGGAGCGTGGCTTGGGCAGGTaGGAATCCTCTTTTCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: GLVCSRVTLRTLRFVLLERGLGR*ESSFLS Trigger: GGAGAGAAAAGAGGATTCCCACCTGCCCAAGCCACG...CTCCAGCAAAACAAAGCGCAGCGTTCTCAGCGTGACTCGGGAACAAACCAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
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| CDS-3UTR CCA 90 bp | CGCTGCGCTTTGTTTTGCTGGAGCCGAACCAGGACCTTTCACACCGACATGACGCTCCCAGAGCCAGACTaGCGATCAAGATATTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: RCALFCWSRTRTFHTDMTLPEPD*RSRYWD Trigger: GTCCCAATATCTTGATCGCCAGTCTGGCTCTGGGAG...CGTCATGTCGGTGTGAAAGGTCCTGGTTCGGCTCCAGCAAAACAAAGCGCAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
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| CDS-3UTR CCA 90 bp | AGAACGCTGCGCTTTGTTTTGCTGGAGCCGAACCAGGACCTTTCACACCGACATCGTGGCTTGGGCAGGTaGGAATCCTCTTTTCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: RTLRFVLLEPNQDLSHRHRGLGR*ESSFLS Trigger: GGAGAGAAAAGAGGATTCCCACCTGCCCAAGCCACG...ATGTCGGTGTGAAAGGTCCTGGTTCGGCTCCAGCAAAACAAAGCGCAGCGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
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| CDS-3UTR CCA 90 bp | GGCTTGGTTTGTTCCCGAGTCACGCTGAGAACGCTGCGCTTTGTTTTGCTGGAGGGCAGAAGACTGTCTTaGCCACTTCTCGTCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: GLVCSRVTLRTLRFVLLEGRRLS*PLLVSA Trigger: AGCAGAGACGAGAAGTGGCCAAGACAGTCTTCTGCC...CTCCAGCAAAACAAAGCGCAGCGTTCTCAGCGTGACTCGGGAACAAACCAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
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| CDS-3UTR TCA 90 bp | CGCTGCGCTTTGTTTTGCTGGAGCCGAACCAGGACCTTTCACACCGACATGACGAAAGACTCAGCACTGTaGTTCCCACAGAAGCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: RCALFCWSRTRTFHTDMTKDSAL*FPQKPS Trigger: AGAAGGCTTCTGTGGGAATCACAGTGCTGAGTCTTT...CGTCATGTCGGTGTGAAAGGTCCTGGTTCGGCTCCAGCAAAACAAAGCGCAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
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| CDS-3UTR GCA 90 bp | CGCTGCGCTTTGTTTTGCTGGAGCCGAACCAGGACCTTTCACACCGACATGACGATGTCTATGATGATGTaGAGTAGGTCTCCCAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: RCALFCWSRTRTFHTDMTMSMMM*SRSPRA Trigger: GGCTCTGGGAGACCTACTGCACATCATCATAGACAT...CGTCATGTCGGTGTGAAAGGTCCTGGTTCGGCTCCAGCAAAACAAAGCGCAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
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| CDS-3UTR CCA 90 bp | GGTTACTGGCATCTCTTTGTCAGAAAGCTACGAACGCTGGGACCTGCCCTTTGTGCATCAGACTGGAGTTaGAACCTCTGGTCCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: GYWHLFVRKLRTLGPALCASDWS*NLWSRR Trigger: CCTCCTGGACCAGAGGTTCCAACTCCAGTCTGATGC...ACAAAGGGCAGGTCCCAGCGTTCGTAGCTTTCTGACAAAGAGATGCCAGTAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 |
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| CDS-3UTR CCA 90 bp | TTCCCGAGTCACGCTGAGAACGCTGCGCTTTGTTTTGCTGGAGCCGAACCAGGATGGCGATCAAGATATTaGGACCATTGCGCATGCACT | + |
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Preference number: 4 (lower is better) Translates to: FPSHAENAALCFAGAEPGWRSRY*DHCACT Trigger: AGTGCATGCGCAATGGTCCCAATATCTTGATCGCCA...TCCTGGTTCGGCTCCAGCAAAACAAAGCGCAGCGTTCTCAGCGTGACTCGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
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| CDS-3UTR CCA 90 bp | GACCTTTCACACCGACATGACGTGGCAGTGACGAACACAGGGCTAAGAATGGGACTCCCAGAGCCAGACTaGCGATCAAGATATTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: DLSHRHDVAVTNTGLRMGLPEPD*RSRYWD Trigger: GTCCCAATATCTTGATCGCCAGTCTGGCTCTGGGAG...TCCCATTCTTAGCCCTGTGTTCGTCACTGCCACGTCATGTCGGTGTGAAAGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
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| 3UTR CAA 72 bp | CTCTACAGCATGGCTGAAAGGATGCTCCCTGCTTCTTaGCCATGTGGACACTGCACCGGGCAATTCACATTC | + |
|
Preference number: 4 (lower is better) Translates to: LYSMAERMLPAS*PCGHCTGQFTF Trigger: GAATGTGAATTGCCCGGTGCAGTGTCCACATGGCAAAGAAGCAGGGAGCATCCTTTCAGCCATGCTGTAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 |
||
| CDS-3UTR TCA 90 bp | GACCTTTCACACCGACATGACGTGGCAGTGACGAACACAGGGCTAAGAATGGGACAGAAGCCTTCTGTATaGAGGGCACCAGCTTACACA | + |
|
Preference number: 4 (lower is better) Translates to: DLSHRHDVAVTNTGLRMGQKPSV*RAPAYT Trigger: TGTGTAAGCTGGTGCCCTTCATACAGAAGGCTTCTG...TCCCATTCTTAGCCCTGTGTTCGTCACTGCCACGTCATGTCGGTGTGAAAGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR TCA 90 bp | GGCTTGGTTTGTTCCCGAGTCACGCTGAGAACGCTGCGCTTTGTTTTGCTGGAGAAAGACTCAGCACTGTaGTTCCCACAGAAGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLVCSRVTLRTLRFVLLEKDSAL*FPQKPS Trigger: AGAAGGCTTCTGTGGGAATCACAGTGCTGAGTCTTT...CTCCAGCAAAACAAAGCGCAGCGTTCTCAGCGTGACTCGGGAACAAACCAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR GCA 90 bp | TTCCCGAGTCACGCTGAGAACGCTGCGCTTTGTTTTGCTGGAGCCGAACCAGGATTCTCCTCCAAGGACTaGTTTTCCTCAAACGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FPSHAENAALCFAGAEPGFSSKD*FSSNVW Trigger: CCAAACGTTTGAGGAAAAGCAGTCCTTGGAGGAGAA...TCCTGGTTCGGCTCCAGCAAAACAAAGCGCAGCGTTCTCAGCGTGACTCGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR CCA 90 bp | GGCTTGGTTTGTTCCCGAGTCACGCTGAGAACGCTGCGCTTTGTTTTGCTGGAGTGGCGATCAAGATATTaGGACCATTGCGCATGCACT | + |
|
Preference number: 4 (lower is better) Translates to: GLVCSRVTLRTLRFVLLEWRSRY*DHCACT Trigger: AGTGCATGCGCAATGGTCCCAATATCTTGATCGCCA...CTCCAGCAAAACAAAGCGCAGCGTTCTCAGCGTGACTCGGGAACAAACCAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR TCA 90 bp | GACGTGGCAGTGACGAACACAGGGCTAAGAATGGGAATATTTCCCCACGGGCTTAAAGACTCAGCACTGTaGTTCCCACAGAAGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DVAVTNTGLRMGIFPHGLKDSAL*FPQKPS Trigger: AGAAGGCTTCTGTGGGAATCACAGTGCTGAGTCTTT...AAGCCCGTGGGGAAATATTCCCATTCTTAGCCCTGTGTTCGTCACTGCCACGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR TCA 90 bp | TTCCCGAGTCACGCTGAGAACGCTGCGCTTTGTTTTGCTGGAGCCGAACCAGGAAAGTTGTCATATCCGTaGTCGTTGGCTTTGAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: FPSHAENAALCFAGAEPGKLSYP*SLALNF Trigger: GAAGTTCAAAGCCAACGATCACGGATATGACAACTT...TCCTGGTTCGGCTCCAGCAAAACAAAGCGCAGCGTTCTCAGCGTGACTCGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR GCA 90 bp | TTCCCGAGTCACGCTGAGAACGCTGCGCTTTGTTTTGCTGGAGCCGAACCAGGAAGATATTGGGACCATTaGGCATGCACTTGTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FPSHAENAALCFAGAEPGRYWDH*ACTCSC Trigger: ACAAGAACAAGTGCATGCGCAATGGTCCCAATATCT...TCCTGGTTCGGCTCCAGCAAAACAAAGCGCAGCGTTCTCAGCGTGACTCGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR GCA 90 bp | GACGTGGCAGTGACGAACACAGGGCTAAGAATGGGAATATTTCCCCACGGGCTTATGTCTATGATGATGTaGAGTAGGTCTCCCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: DVAVTNTGLRMGIFPHGLMSMMM*SRSPRA Trigger: GGCTCTGGGAGACCTACTGCACATCATCATAGACAT...AAGCCCGTGGGGAAATATTCCCATTCTTAGCCCTGTGTTCGTCACTGCCACGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR GCA 90 bp | GACCTTTCACACCGACATGACGTGGCAGTGACGAACACAGGGCTAAGAATGGGAATGTCTATGATGATGTaGAGTAGGTCTCCCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: DLSHRHDVAVTNTGLRMGMSMMM*SRSPRA Trigger: GGCTCTGGGAGACCTACTGCACATCATCATAGACAT...TCCCATTCTTAGCCCTGTGTTCGTCACTGCCACGTCATGTCGGTGTGAAAGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR CCA 90 bp | AGAACGCTGCGCTTTGTTTTGCTGGAGCCGAACCAGGACCTTTCACACCGACATGGAGGTCTTAGTGGGTaGCGTCATTACCTCTTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: RTLRFVLLEPNQDLSHRHGGLSG*RHYLFS Trigger: ACTAAAGAGGTAATGACGCCACCCACTAAGACCTCC...ATGTCGGTGTGAAAGGTCCTGGTTCGGCTCCAGCAAAACAAAGCGCAGCGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR TCA 90 bp | GGCTTGGTTTGTTCCCGAGTCACGCTGAGAACGCTGCGCTTTGTTTTGCTGGAGATGAAGGCTGTTTTCTaGAAGGGATTAAGCATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GLVCSRVTLRTLRFVLLEMKAVF*KGLSMQ Trigger: CTGCATGCTTAATCCCTTTCAGAAAACAGCCTTCAT...CTCCAGCAAAACAAAGCGCAGCGTTCTCAGCGTGACTCGGGAACAAACCAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR TCA 90 bp | CGAGTCACGCTGAGAACGCTGCGCTTTGTTTTGCTGGAGCCGAACCAGGACCTTTCTTGTAAAACTGCATaGAGGCTGTTTTCTGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RVTLRTLRFVLLEPNQDLSCKTA*RLFSER Trigger: CCTTTCAGAAAACAGCCTTCATGCAGTTTTACAAGA...AAGGTCCTGGTTCGGCTCCAGCAAAACAAAGCGCAGCGTTCTCAGCGTGACTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR TCA 90 bp | AGAACGCTGCGCTTTGTTTTGCTGGAGCCGAACCAGGACCTTTCACACCGACATAGCAGAAGTAGAAACTaGACAGCCACCAATCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RTLRFVLLEPNQDLSHRHSRSRN*TATNLW Trigger: CCAAAGATTGGTGGCTGTTCAGTTTCTACTTCTGCT...ATGTCGGTGTGAAAGGTCCTGGTTCGGCTCCAGCAAAACAAAGCGCAGCGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR TCA 90 bp | GGCTTGGTTTGTTCCCGAGTCACGCTGAGAACGCTGCGCTTTGTTTTGCTGGAGCGTCTCTGCTTTAAGTaGTCATTCAAAGCAATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GLVCSRVTLRTLRFVLLERLCFK*SFKAIC Trigger: GCAGATTGCTTTGAATGATCACTTAAAGCAGAGACG...CTCCAGCAAAACAAAGCGCAGCGTTCTCAGCGTGACTCGGGAACAAACCAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR TCA 90 bp | GACCTTTCACACCGACATGACGTGGCAGTGACGAACACAGGGCTAAGAATGGGAACAGAGCGATTGGATTaGTGCAGGAGTTCAAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DLSHRHDVAVTNTGLRMGTERLD*CRSSKK Trigger: CTTCTTTGAACTCCTGCATCAATCCAATCGCTCTGT...TCCCATTCTTAGCCCTGTGTTCGTCACTGCCACGTCATGTCGGTGTGAAAGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR GCA 90 bp | GACCTTTCACACCGACATGACGTGGCAGTGACGAACACAGGGCTAAGAATGGGATTCTCCTCCAAGGACTaGTTTTCCTCAAACGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: DLSHRHDVAVTNTGLRMGFSSKD*FSSNVW Trigger: CCAAACGTTTGAGGAAAAGCAGTCCTTGGAGGAGAA...TCCCATTCTTAGCCCTGTGTTCGTCACTGCCACGTCATGTCGGTGTGAAAGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR CCA 90 bp | GGTTACTGGCATCTCTTTGTCAGAAAGCTACGAACGCTGGGACCTGCCCTTTGTGGAGGTCTTAGTGGGTaGCGTCATTACCTCTTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: GYWHLFVRKLRTLGPALCGGLSG*RHYLFS Trigger: ACTAAAGAGGTAATGACGCCACCCACTAAGACCTCC...ACAAAGGGCAGGTCCCAGCGTTCGTAGCTTTCTGACAAAGAGATGCCAGTAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 |
||
| CDS-3UTR CCA 90 bp | GACCTTTCACACCGACATGACGTGGCAGTGACGAACACAGGGCTAAGAATGGGATCATATCAAAACCTATaGCTTCGGGGACAGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: DLSHRHDVAVTNTGLRMGSYQNL*LRGQPE Trigger: TTCTGGCTGTCCCCGAAGCCATAGGTTTTGATATGA...TCCCATTCTTAGCCCTGTGTTCGTCACTGCCACGTCATGTCGGTGTGAAAGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR CCA 90 bp | GAGGGAATTTCAGAAGTCTCAGGCATAGCAGCTCACGCTTTCCCATGTTTTCTCGGCAGAAGACTGTCTTaGCCACTTCTCGTCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EGISEVSGIAAHAFPCFLGRRLS*PLLVSA Trigger: AGCAGAGACGAGAAGTGGCCAAGACAGTCTTCTGCC...GAGAAAACATGGGAAAGCGTGAGCTGCTATGCCTGAGACTTCTGAAATTCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 |
||
| CDS-3UTR CCA 90 bp | TTCCCGAGTCACGCTGAGAACGCTGCGCTTTGTTTTGCTGGAGCCGAACCAGGACAAATACAGAGCGATTaGATTGATGCAGGAGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FPSHAENAALCFAGAEPGQIQSD*IDAGVQ Trigger: TTGAACTCCTGCATCAATCCAATCGCTCTGTATTTG...TCCTGGTTCGGCTCCAGCAAAACAAAGCGCAGCGTTCTCAGCGTGACTCGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR CCA 90 bp | CGCTGCGCTTTGTTTTGCTGGAGCCGAACCAGGACCTTTCACACCGACATGACGCAAATACAGAGCGATTaGATTGATGCAGGAGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RCALFCWSRTRTFHTDMTQIQSD*IDAGVQ Trigger: TTGAACTCCTGCATCAATCCAATCGCTCTGTATTTG...CGTCATGTCGGTGTGAAAGGTCCTGGTTCGGCTCCAGCAAAACAAAGCGCAGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR CCA 90 bp | CGAGTCACGCTGAGAACGCTGCGCTTTGTTTTGCTGGAGCCGAACCAGGACCTTAGCTGTATTTATTGCTaGACCGGAAGTTGTCATATC | + |
|
Preference number: 4 (lower is better) Translates to: RVTLRTLRFVLLEPNQDLSCIYC*TGSCHI Trigger: GATATGACAACTTCCGGTCCAGCAATAAATACAGCT...AAGGTCCTGGTTCGGCTCCAGCAAAACAAAGCGCAGCGTTCTCAGCGTGACTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR TCA 90 bp | GAGGGAATTTCAGAAGTCTCAGGCATAGCAGCTCACGCTTTCCCATGTTTTCTCCAGAAGCCTTCTGTATaGAGGGCACCAGCTTACACA | + |
|
Preference number: 4 (lower is better) Translates to: EGISEVSGIAAHAFPCFLQKPSV*RAPAYT Trigger: TGTGTAAGCTGGTGCCCTTCATACAGAAGGCTTCTG...GAGAAAACATGGGAAAGCGTGAGCTGCTATGCCTGAGACTTCTGAAATTCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 |
||
| CDS-3UTR TCA 90 bp | GACCTTTCACACCGACATGACGTGGCAGTGACGAACACAGGGCTAAGAATGGGAATGAAGGCTGTTTTCTaGAAGGGATTAAGCATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DLSHRHDVAVTNTGLRMGMKAVF*KGLSMQ Trigger: CTGCATGCTTAATCCCTTTCAGAAAACAGCCTTCAT...TCCCATTCTTAGCCCTGTGTTCGTCACTGCCACGTCATGTCGGTGTGAAAGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR TCA 90 bp | GGTTACTGGCATCTCTTTGTCAGAAAGCTACGAACGCTGGGACCTGCCCTTTGTAGCAGAAGTAGAAACTaGACAGCCACCAATCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GYWHLFVRKLRTLGPALCSRSRN*TATNLW Trigger: CCAAAGATTGGTGGCTGTTCAGTTTCTACTTCTGCT...ACAAAGGGCAGGTCCCAGCGTTCGTAGCTTTCTGACAAAGAGATGCCAGTAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 |
||
| CDS-3UTR TCA 90 bp | TTCCCGAGTCACGCTGAGAACGCTGCGCTTTGTTTTGCTGGAGCCGAACCAGGATCAAAGAAGCCATGTTaGTACCAATGTAGTCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: FPSHAENAALCFAGAEPGSKKPC*YQCSPK Trigger: TTTTGGACTACATTGGTATCAACATGGCTTCTTTGA...TCCTGGTTCGGCTCCAGCAAAACAAAGCGCAGCGTTCTCAGCGTGACTCGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR GCA 90 bp | AGAACGCTGCGCTTTGTTTTGCTGGAGCCGAACCAGGACCTTTCACACCGACATACGAGCTGTATTTATTaGTGGACCGGAAGTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RTLRFVLLEPNQDLSHRHTSCIY*WTGSCH Trigger: ATGACAACTTCCGGTCCAGCAATAAATACAGCTCGT...ATGTCGGTGTGAAAGGTCCTGGTTCGGCTCCAGCAAAACAAAGCGCAGCGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR CCA 90 bp | AGAACGCTGCGCTTTGTTTTGCTGGAGCCGAACCAGGACCTTTCACACCGACATACAGCCACCAATCTTTaGCTGTCTTGTAAAACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RTLRFVLLEPNQDLSHRHTATNL*LSCKTA Trigger: TGCAGTTTTACAAGACAGCCAAAGATTGGTGGCTGT...ATGTCGGTGTGAAAGGTCCTGGTTCGGCTCCAGCAAAACAAAGCGCAGCGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR CCA 90 bp | GTGGCAGTGACGAACACAGGGCTAAGAATGGGAATATTTCCCCACGGGCTTCCTACAGCCACCAATCTTTaGCTGTCTTGTAAAACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VAVTNTGLRMGIFPHGLPTATNL*LSCKTA Trigger: TGCAGTTTTACAAGACAGCCAAAGATTGGTGGCTGT...AGGAAGCCCGTGGGGAAATATTCCCATTCTTAGCCCTGTGTTCGTCACTGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR CCA 90 bp | GACCTTTCACACCGACATGACGTGGCAGTGACGAACACAGGGCTAAGAATGGGATTTTCCTCAAACGTTTaGCACCAGCAGCACAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: DLSHRHDVAVTNTGLRMGFSSNV*HQQHKH Trigger: ATGTTTGTGCTGCTGGTGCCAAACGTTTGAGGAAAA...TCCCATTCTTAGCCCTGTGTTCGTCACTGCCACGTCATGTCGGTGTGAAAGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| 3UTR CAA 72 bp | TCACATTCTGTCTATAACCGGGTTACTGGCATCTCTTaGTCAGAAAGCTACGAACGCTGGGACCTGCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SHSVYNRVTGIS*SESYERWDLPF Trigger: AAAGGGCAGGTCCCAGCGTTCGTAGCTTTCTGACAAAGAGATGCCAGTAACCCGGTTATAGACAGAATGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 |
||
| CDS-3UTR TCA 90 bp | GTGGCAGTGACGAACACAGGGCTAAGAATGGGAATATTTCCCCACGGGCTTCCTTCTTGTAAAACTGCATaGAGGCTGTTTTCTGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VAVTNTGLRMGIFPHGLPSCKTA*RLFSER Trigger: CCTTTCAGAAAACAGCCTTCATGCAGTTTTACAAGA...AGGAAGCCCGTGGGGAAATATTCCCATTCTTAGCCCTGTGTTCGTCACTGCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR TCA 90 bp | GGTTACTGGCATCTCTTTGTCAGAAAGCTACGAACGCTGGGACCTGCCCTTTGTCGTCTCTGCTTTAAGTaGTCATTCAAAGCAATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GYWHLFVRKLRTLGPALCRLCFK*SFKAIC Trigger: GCAGATTGCTTTGAATGATCACTTAAAGCAGAGACG...ACAAAGGGCAGGTCCCAGCGTTCGTAGCTTTCTGACAAAGAGATGCCAGTAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 |
||
| CDS-3UTR CCA 90 bp | GACGTGGCAGTGACGAACACAGGGCTAAGAATGGGAATATTTCCCCACGGGCTTCAAATACAGAGCGATTaGATTGATGCAGGAGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: DVAVTNTGLRMGIFPHGLQIQSD*IDAGVQ Trigger: TTGAACTCCTGCATCAATCCAATCGCTCTGTATTTG...AAGCCCGTGGGGAAATATTCCCATTCTTAGCCCTGTGTTCGTCACTGCCACGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR CCA 90 bp | GGTTACTGGCATCTCTTTGTCAGAAAGCTACGAACGCTGGGACCTGCCCTTTGTTTTTCCTCAAACGTTTaGCACCAGCAGCACAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: GYWHLFVRKLRTLGPALCFSSNV*HQQHKH Trigger: ATGTTTGTGCTGCTGGTGCCAAACGTTTGAGGAAAA...ACAAAGGGCAGGTCCCAGCGTTCGTAGCTTTCTGACAAAGAGATGCCAGTAACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 |
||
| CDS-3UTR TCA 90 bp | GAGGGAATTTCAGAAGTCTCAGGCATAGCAGCTCACGCTTTCCCATGTTTTCTCAGCAGAAGTAGAAACTaGACAGCCACCAATCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: EGISEVSGIAAHAFPCFLSRSRN*TATNLW Trigger: CCAAAGATTGGTGGCTGTTCAGTTTCTACTTCTGCT...GAGAAAACATGGGAAAGCGTGAGCTGCTATGCCTGAGACTTCTGAAATTCCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 |
||
| CDS-3UTR TCA 90 bp | AGAACGCTGCGCTTTGTTTTGCTGGAGCCGAACCAGGACCTTTCACACCGACATTCAAAGAAGCCATGTTaGTACCAATGTAGTCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RTLRFVLLEPNQDLSHRHSKKPC*YQCSPK Trigger: TTTTGGACTACATTGGTATCAACATGGCTTCTTTGA...ATGTCGGTGTGAAAGGTCCTGGTTCGGCTCCAGCAAAACAAAGCGCAGCGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR TCA 90 bp | GACGTGGCAGTGACGAACACAGGGCTAAGAATGGGAATATTTCCCCACGGGCTTTCAAAGAAGCCATGTTaGTACCAATGTAGTCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: DVAVTNTGLRMGIFPHGLSKKPC*YQCSPK Trigger: TTTTGGACTACATTGGTATCAACATGGCTTCTTTGA...AAGCCCGTGGGGAAATATTCCCATTCTTAGCCCTGTGTTCGTCACTGCCACGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR CCA 90 bp | GACCTTTCACACCGACATGACGTGGCAGTGACGAACACAGGGCTAAGAATGGGATACTGCTGTCCATTTTaGAACCCCAATTCCTTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: DLSHRHDVAVTNTGLRMGYCCPF*NPNSFN Trigger: ATTAAAGGAATTGGGGTTCCAAAATGGACAGCAGTA...TCCCATTCTTAGCCCTGTGTTCGTCACTGCCACGTCATGTCGGTGTGAAAGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR CCA 90 bp | GAGGGAATTTCAGAAGTCTCAGGCATAGCAGCTCACGCTTTCCCATGTTTTCTCTCATATCAAAACCTATaGCTTCGGGGACAGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: EGISEVSGIAAHAFPCFLSYQNL*LRGQPE Trigger: TTCTGGCTGTCCCCGAAGCCATAGGTTTTGATATGA...GAGAAAACATGGGAAAGCGTGAGCTGCTATGCCTGAGACTTCTGAAATTCCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 |
||
| CDS-3UTR GCA 90 bp | TTGTCCCGTTTGGGTTTATTGTATTGTCACAATGATTTTGGTAGAAAACTGCATGGTCACCTCCGCAGGTaGGGAGGAACGCATCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: LSRLGLLYCHNDFGRKLHGHLRR*GGTHQT Trigger: AGTCTGATGCGTTCCTCCGCACCTGCGGAGGTGACC...ATGCAGTTTTCTACCAAAATCATTGTGACAATACAATAAACCCAAACGGGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR CCA 90 bp | CATTTTCAACATGTGGCCTGGGTTATGAAAAGAAGAGAAGAGAAGAGAAGAGAAGCATCAGACTGGAGTTaGAACCTCTGGTCCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HFQHVAWVMKRREEKRREASDWS*NLWSRR Trigger: CCTCCTGGACCAGAGGTTCCAACTCCAGTCTGATGC...TTCTCTTCTCTTCTCTTCTCTTCTTTTCATAACCCAGGCCACATGTTGAAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR TCA 90 bp | TTGTCCCGTTTGGGTTTATTGTATTGTCACAATGATTTTGGTAGAAAACTGCATGCGTGGAGTTCCCGATaGTGCCTAGCACGAACACGA | + |
|
Preference number: 4 (lower is better) Translates to: LSRLGLLYCHNDFGRKLHAWSSR*CLARTR Trigger: TCGTGTTCGTGCTAGGCATCATCGGGAACTCCACGC...ATGCAGTTTTCTACCAAAATCATTGTGACAATACAATAAACCCAAACGGGACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR CCA 90 bp | CATTTTCAACATGTGGCCTGGGTTATGAAAAGAAGAGAAGAGAAGAGAAGAGAACTCCCAGAGCCAGACTaGCGATCAAGATATTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HFQHVAWVMKRREEKRRELPEPD*RSRYWD Trigger: GTCCCAATATCTTGATCGCCAGTCTGGCTCTGGGAG...TTCTCTTCTCTTCTCTTCTCTTCTTTTCATAACCCAGGCCACATGTTGAAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR CCA 90 bp | GAGGGAATTTCAGAAGTCTCAGGCATAGCAGCTCACGCTTTCCCATGTTTTCTCAGCTGTATTTATTGCTaGACCGGAAGTTGTCATATC | + |
|
Preference number: 4 (lower is better) Translates to: EGISEVSGIAAHAFPCFLSCIYC*TGSCHI Trigger: GATATGACAACTTCCGGTCCAGCAATAAATACAGCT...GAGAAAACATGGGAAAGCGTGAGCTGCTATGCCTGAGACTTCTGAAATTCCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 |
||
| CDS-3UTR CCA 90 bp | TTGTCCCGTTTGGGTTTATTGTATTGTCACAATGATTTTGGTAGAAAACTGCATCGTGGCTTGGGCAGGTaGGAATCCTCTTTTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSRLGLLYCHNDFGRKLHRGLGR*ESSFLS Trigger: GGAGAGAAAAGAGGATTCCCACCTGCCCAAGCCACG...ATGCAGTTTTCTACCAAAATCATTGTGACAATACAATAAACCCAAACGGGACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR CCA 90 bp | TTGTCCCGTTTGGGTTTATTGTATTGTCACAATGATTTTGGTAGAAAACTGCATGGCAGAAGACTGTCTTaGCCACTTCTCGTCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSRLGLLYCHNDFGRKLHGRRLS*PLLVSA Trigger: AGCAGAGACGAGAAGTGGCCAAGACAGTCTTCTGCC...ATGCAGTTTTCTACCAAAATCATTGTGACAATACAATAAACCCAAACGGGACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| 3UTR CAA 72 bp | TATTACAAGTGCATGTTAGGTACAACACACCCGCATTaGGATGAAAACAGTGTTCCTTTGGCTGTTGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: YYKCMLGTTHPH*DENSVPLAVAH Trigger: ATGTGCAACAGCCAAAGGAACACTGTTTTCATCCAAATGCGGGTGTGTTGTACCTAACATGCACTTGTAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR TCA 90 bp | TGGCAACGGTTTCATTTTGTTTTAATGGTATCTGTCCACAATGAGGACAGTGAGATGAAGGCTGTTTTCTaGAAGGGATTAAGCATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WQRFHFVLMVSVHNEDSEMKAVF*KGLSMQ Trigger: CTGCATGCTTAATCCCTTTCAGAAAACAGCCTTCAT...CTCACTGTCCTCATTGTGGACAGATACCATTAAAACAAAATGAAACCGTTGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 |
||
| CDS-3UTR CCA 90 bp | CATTTTCAACATGTGGCCTGGGTTATGAAAAGAAGAGAAGAGAAGAGAAGAGAATCATATCAAAACCTATaGCTTCGGGGACAGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HFQHVAWVMKRREEKRRESYQNL*LRGQPE Trigger: TTCTGGCTGTCCCCGAAGCCATAGGTTTTGATATGA...TTCTCTTCTCTTCTCTTCTCTTCTTTTCATAACCCAGGCCACATGTTGAAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR TCA 90 bp | CATTTTCAACATGTGGCCTGGGTTATGAAAAGAAGAGAAGAGAAGAGAAGAGAAAAGTTGTCATATCCGTaGTCGTTGGCTTTGAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: HFQHVAWVMKRREEKRREKLSYP*SLALNF Trigger: GAAGTTCAAAGCCAACGATCACGGATATGACAACTT...TTCTCTTCTCTTCTCTTCTCTTCTTTTCATAACCCAGGCCACATGTTGAAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR GCA 90 bp | CATTTTCAACATGTGGCCTGGGTTATGAAAAGAAGAGAAGAGAAGAGAAGAGAAACGAGCTGTATTTATTaGTGGACCGGAAGTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: HFQHVAWVMKRREEKRRETSCIY*WTGSCH Trigger: ATGACAACTTCCGGTCCAGCAATAAATACAGCTCGT...TTCTCTTCTCTTCTCTTCTCTTCTTTTCATAACCCAGGCCACATGTTGAAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR CCA 90 bp | TTGTCCCGTTTGGGTTTATTGTATTGTCACAATGATTTTGGTAGAAAACTGCATTGGCGATCAAGATATTaGGACCATTGCGCATGCACT | + |
|
Preference number: 4 (lower is better) Translates to: LSRLGLLYCHNDFGRKLHWRSRY*DHCACT Trigger: AGTGCATGCGCAATGGTCCCAATATCTTGATCGCCA...ATGCAGTTTTCTACCAAAATCATTGTGACAATACAATAAACCCAAACGGGACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| 3UTR CAA 72 bp | ATTCTTATGCCATTTCATAATTTGGCAGGACGATTATaGCCCATGAAGAGGGAAGGAACATCTGGGTTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ILMPFHNLAGRL*PMKREGTSGLN Trigger: GTTTAACCCAGATGTTCCTTCCCTCTTCATGGGCAATAATCGTCCTGCCAAATTATGAAATGGCATAAGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR TCA 90 bp | TTGTCCCGTTTGGGTTTATTGTATTGTCACAATGATTTTGGTAGAAAACTGCATACAGAGCGATTGGATTaGTGCAGGAGTTCAAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSRLGLLYCHNDFGRKLHTERLD*CRSSKK Trigger: CTTCTTTGAACTCCTGCATCAATCCAATCGCTCTGT...ATGCAGTTTTCTACCAAAATCATTGTGACAATACAATAAACCCAAACGGGACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR TCA 90 bp | TTGTCCCGTTTGGGTTTATTGTATTGTCACAATGATTTTGGTAGAAAACTGCATCGTCTCTGCTTTAAGTaGTCATTCAAAGCAATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSRLGLLYCHNDFGRKLHRLCFK*SFKAIC Trigger: GCAGATTGCTTTGAATGATCACTTAAAGCAGAGACG...ATGCAGTTTTCTACCAAAATCATTGTGACAATACAATAAACCCAAACGGGACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR GCA 90 bp | TTGTCCCGTTTGGGTTTATTGTATTGTCACAATGATTTTGGTAGAAAACTGCATAGATATTGGGACCATTaGGCATGCACTTGTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSRLGLLYCHNDFGRKLHRYWDH*ACTCSC Trigger: ACAAGAACAAGTGCATGCGCAATGGTCCCAATATCT...ATGCAGTTTTCTACCAAAATCATTGTGACAATACAATAAACCCAAACGGGACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR CCA 90 bp | CATTTTCAACATGTGGCCTGGGTTATGAAAAGAAGAGAAGAGAAGAGAAGAGAATACTGCTGTCCATTTTaGAACCCCAATTCCTTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: HFQHVAWVMKRREEKRREYCCPF*NPNSFN Trigger: ATTAAAGGAATTGGGGTTCCAAAATGGACAGCAGTA...TTCTCTTCTCTTCTCTTCTCTTCTTTTCATAACCCAGGCCACATGTTGAAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR CCA 90 bp | TTGTCCCGTTTGGGTTTATTGTATTGTCACAATGATTTTGGTAGAAAACTGCATTTTTCCTCAAACGTTTaGCACCAGCAGCACAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: LSRLGLLYCHNDFGRKLHFSSNV*HQQHKH Trigger: ATGTTTGTGCTGCTGGTGCCAAACGTTTGAGGAAAA...ATGCAGTTTTCTACCAAAATCATTGTGACAATACAATAAACCCAAACGGGACAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR TCA 90 bp | TTGTCCCGTTTGGGTTTATTGTATTGTCACAATGATTTTGGTAGAAAACTGCATTCTTGTAAAACTGCATaGAGGCTGTTTTCTGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSRLGLLYCHNDFGRKLHSCKTA*RLFSER Trigger: CCTTTCAGAAAACAGCCTTCATGCAGTTTTACAAGA...ATGCAGTTTTCTACCAAAATCATTGTGACAATACAATAAACCCAAACGGGACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| 3UTR CAA 72 bp | TTGGGAGAAAATAGGCTGAAGTCACTTACAAATCGTTaGACCTCTAACATCCTTGTTAACACTATTTTTATG | + |
|
Preference number: 4 (lower is better) Translates to: LGENRLKSLTNR*TSNILVNTIFM Trigger: CATAAAAATAGTGTTAACAAGGATGTTAGAGGTCAAACGATTTGTAAGTGACTTCAGCCTATTTTCTCCCAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS TCA 90 bp | GGAGGTCTTAGTGGGTGGCGTCATTACCTCTTTAGTCCCGAGAAGTaGCAGCGTGGCTTGGGCAGGTGGGAATCCTCTTTTCTCTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GGLSGWRHYLFSPEK*QRGLGRWESSFLSP Trigger: TGGGGAGAGAAAAGAGGATTCCCACCTGCCCAAGCCACGCTGTCACTTCTCGGGACTAAAGAGGTAATGACGCCACCCACTAAGACCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR CAA 90 bp | CGCTGCGCTTTGTTTTGCTGGAGCCGAACCAGGACCTTTCACACCGACATGACGGATCTCAATATTTCGTaGGCACGGAGGAGGGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RCALFCWSRTRTFHTDMTDLNIS*ARRREG Trigger: TCCTTCCCTCCTCCGTGCCAACGAAATATTGAGATC...CGTCATGTCGGTGTGAAAGGTCCTGGTTCGGCTCCAGCAAAACAAAGCGCAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR CAA 90 bp | TTCCCGAGTCACGCTGAGAACGCTGCGCTTTGTTTTGCTGGAGCCGAACCAGGAGATCTCAATATTTCGTaGGCACGGAGGAGGGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: FPSHAENAALCFAGAEPGDLNIS*ARRREG Trigger: TCCTTCCCTCCTCCGTGCCAACGAAATATTGAGATC...TCCTGGTTCGGCTCCAGCAAAACAAAGCGCAGCGTTCTCAGCGTGACTCGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR CAA 90 bp | GACCTTTCACACCGACATGACGTGGCAGTGACGAACACAGGGCTAAGAATGGGACTGGCGATCAAGATATaGGGACCATTGCGCATGCAC | + |
|
Preference number: 5 (lower is better) Translates to: DLSHRHDVAVTNTGLRMGLAIKI*GPLRMH Trigger: GTGCATGCGCAATGGTCCCAATATCTTGATCGCCAG...TCCCATTCTTAGCCCTGTGTTCGTCACTGCCACGTCATGTCGGTGTGAAAGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR CAA 90 bp | CGAGTCACGCTGAGAACGCTGCGCTTTGTTTTGCTGGAGCCGAACCAGGACCTTGACGAGCTGTATTTATaGCTGGACCGGAAGTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RVTLRTLRFVLLEPNQDLDELYL*LDRKLS Trigger: TGACAACTTCCGGTCCAGCAATAAATACAGCTCGTC...AAGGTCCTGGTTCGGCTCCAGCAAAACAAAGCGCAGCGTTCTCAGCGTGACTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR CAA 90 bp | TTCCCGAGTCACGCTGAGAACGCTGCGCTTTGTTTTGCTGGAGCCGAACCAGGAAAGATATTGGGACCATaGCGCATGCACTTGTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FPSHAENAALCFAGAEPGKILGP*RMHLFL Trigger: CAAGAACAAGTGCATGCGCAATGGTCCCAATATCTT...TCCTGGTTCGGCTCCAGCAAAACAAAGCGCAGCGTTCTCAGCGTGACTCGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR CAA 90 bp | GGTTACTGGCATCTCTTTGTCAGAAAGCTACGAACGCTGGGACCTGCCCTTTGTGATCTCAATATTTCGTaGGCACGGAGGAGGGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GYWHLFVRKLRTLGPALCDLNIS*ARRREG Trigger: TCCTTCCCTCCTCCGTGCCAACGAAATATTGAGATC...ACAAAGGGCAGGTCCCAGCGTTCGTAGCTTTCTGACAAAGAGATGCCAGTAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 |
||
| CDS-3UTR CAA 90 bp | GACGTGGCAGTGACGAACACAGGGCTAAGAATGGGAATATTTCCCCACGGGCTTCTTTTCCTCAAACGTTaGGCACCAGCAGCACAAACA | + |
|
Preference number: 5 (lower is better) Translates to: DVAVTNTGLRMGIFPHGLLFLKR*APAAQT Trigger: TGTTTGTGCTGCTGGTGCCAAACGTTTGAGGAAAAG...AAGCCCGTGGGGAAATATTCCCATTCTTAGCCCTGTGTTCGTCACTGCCACGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR CAA 90 bp | AGAACGCTGCGCTTTGTTTTGCTGGAGCCGAACCAGGACCTTTCACACCGACATCTTTTCCTCAAACGTTaGGCACCAGCAGCACAAACA | + |
|
Preference number: 5 (lower is better) Translates to: RTLRFVLLEPNQDLSHRHLFLKR*APAAQT Trigger: TGTTTGTGCTGCTGGTGCCAAACGTTTGAGGAAAAG...ATGTCGGTGTGAAAGGTCCTGGTTCGGCTCCAGCAAAACAAAGCGCAGCGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR CAA 90 bp | GACCTTTCACACCGACATGACGTGGCAGTGACGAACACAGGGCTAAGAATGGGAGACGAGCTGTATTTATaGCTGGACCGGAAGTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: DLSHRHDVAVTNTGLRMGDELYL*LDRKLS Trigger: TGACAACTTCCGGTCCAGCAATAAATACAGCTCGTC...TCCCATTCTTAGCCCTGTGTTCGTCACTGCCACGTCATGTCGGTGTGAAAGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR CAA 90 bp | GTGGCAGTGACGAACACAGGGCTAAGAATGGGAATATTTCCCCACGGGCTTCCTGACGAGCTGTATTTATaGCTGGACCGGAAGTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VAVTNTGLRMGIFPHGLPDELYL*LDRKLS Trigger: TGACAACTTCCGGTCCAGCAATAAATACAGCTCGTC...AGGAAGCCCGTGGGGAAATATTCCCATTCTTAGCCCTGTGTTCGTCACTGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS TCA 90 bp | CAAGACGAGCTGTATTTATTGCTGGACCGGAAGTTGTCATATCCGTaGTCGTTGGCTTTGAACTTCAGGCAGGACTGCTTCTCCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: QDELYLLLDRKLSYP*SLALNFRQDCFSSK Trigger: CTTGGAGGAGAAGCAGTCCTGCCTGAAGTTCAAAGCCAACGATCACGGATATGACAACTTCCGGTCCAGCAATAAATACAGCTCGTCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS GCA 90 bp | GAAGGGCACCAGCTTACACATCTCAGCTCCAAATGGCCAGTCCTCTaGGAGCAACTTGTAGGTGTTAATGGGTATGTCTATGATGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: EGHQLTHLSSKWPVL*EQLVGVNGYVYDDV Trigger: CACATCATCATAGACATACCCATTAACACCTACAAGTTGCTCGCAGAGGACTGGCCATTTGGAGCTGAGATGTGTAAGCTGGTGCCCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS GCA 90 bp | TCGTTGGCTTTGAACTTCAGGCAGGACTGCTTCTCCTCCAAGGACTaGTTTTCCTCAAACGTTTGGCACCAGCAGCACAAACATGACTTA | + |
|
Preference number: 5 (lower is better) Translates to: SLALNFRQDCFSSKD*FSSNVWHQQHKHDL Trigger: TAAGTCATGTTTGTGCTGCTGGTGCCAAACGTTTGAGGAAAAGCAGTCCTTGGAGGAGAAGCAGTCCTGCCTGAAGTTCAAAGCCAACGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS CCA 90 bp | AATGTAGTCCAAAACCAACAAAAAGCTCAGAAGCTCACACCTGTGTaGATTGCTCTGGTCATACAGGGTGAGCTTCAGGATCCGGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: NVVQNQQKAQKLTPV*IALVIQGELQDPAE Trigger: CTCAGCCGGATCCTGAAGCTCACCCTGTATGACCAGAGCAATCCACACAGGTGTGAGCTTCTGAGCTTTTTGTTGGTTTTGGACTACATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR CAA 90 bp | TTCCCGAGTCACGCTGAGAACGCTGCGCTTTGTTTTGCTGGAGCCGAACCAGGACACGACACAATCGTGTaGATGTATTTAAAAGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FPSHAENAALCFAGAEPGHDTIV*MYLKVL Trigger: CAAGACTTTTAAATACATCAACACGATTGTGTCGTG...TCCTGGTTCGGCTCCAGCAAAACAAAGCGCAGCGTTCTCAGCGTGACTCGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR CAA 90 bp | CGCTGCGCTTTGTTTTGCTGGAGCCGAACCAGGACCTTTCACACCGACATGACGCACGACACAATCGTGTaGATGTATTTAAAAGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RCALFCWSRTRTFHTDMTHDTIV*MYLKVL Trigger: CAAGACTTTTAAATACATCAACACGATTGTGTCGTG...CGTCATGTCGGTGTGAAAGGTCCTGGTTCGGCTCCAGCAAAACAAAGCGCAGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS TCA 90 bp | ATTTATTGCTGGACCGGAAGTTGTCATATCCGTGATCGTTGGCTTTaGACTTCAGGCAGGACTGCTTCTCCTCCAAGGACTGCTTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: IYCWTGSCHIRDRWL*TSGRTASPPRTAFP Trigger: AGGAAAAGCAGTCCTTGGAGGAGAAGCAGTCCTGCCTGAAGTTCAAAGCCAACGATCACGGATATGACAACTTCCGGTCCAGCAATAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS-3UTR CAA 90 bp | TGGCAACGGTTTCATTTTGTTTTAATGGTATCTGTCCACAATGAGGACAGTGAGCTGGCGATCAAGATATaGGGACCATTGCGCATGCAC | + |
|
Preference number: 5 (lower is better) Translates to: WQRFHFVLMVSVHNEDSELAIKI*GPLRMH Trigger: GTGCATGCGCAATGGTCCCAATATCTTGATCGCCAG...CTCACTGTCCTCATTGTGGACAGATACCATTAAAACAAAATGAAACCGTTGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 |
||
| CDS-3UTR CAA 90 bp | TGGCAACGGTTTCATTTTGTTTTAATGGTATCTGTCCACAATGAGGACAGTGAGAAGATATTGGGACCATaGCGCATGCACTTGTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: WQRFHFVLMVSVHNEDSEKILGP*RMHLFL Trigger: CAAGAACAAGTGCATGCGCAATGGTCCCAATATCTT...CTCACTGTCCTCATTGTGGACAGATACCATTAAAACAAAATGAAACCGTTGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 |
||
| CDS-3UTR CAA 90 bp | TTGTCCCGTTTGGGTTTATTGTATTGTCACAATGATTTTGGTAGAAAACTGCATAAGATATTGGGACCATaGCGCATGCACTTGTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LSRLGLLYCHNDFGRKLHKILGP*RMHLFL Trigger: CAAGAACAAGTGCATGCGCAATGGTCCCAATATCTT...ATGCAGTTTTCTACCAAAATCATTGTGACAATACAATAAACCCAAACGGGACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
||
| CDS CAA 72 bp | ACCTCCGCAGGTGCGGAGGAACGCATCAGACTGGAGTaGGAACCTCTGGTCCAGGAGGTCTTAGTGGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: TSAGAEERIRLE*EPLVQEVLVGG Trigger: GCCACCCACTAAGACCTCCTGGACCAGAGGTTCCAACTCCAGTCTGATGCGTTCCTCCGCACCTGCGGAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
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| CDS CAA 90 bp | CCTTTGGTCACCTCCGCAGGTGCGGAGGAACGCATCAGACTGGAGTaGGAACCTCTGGTCCAGGAGGTCTTAGTGGGTGGCGTCATTACC | + |
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Preference number: 6 (lower is better) Translates to: PLVTSAGAEERIRLE*EPLVQEVLVGGVIT Trigger: GGTAATGACGCCACCCACTAAGACCTCCTGGACCAGAGGTTCCAACTCCAGTCTGATGCGTTCCTCCGCACCTGCGGAGGTGACCAAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
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| CDS CCA 72 bp | ATTACCTCTTTAGTCCCGAGAAGTGACAGCGTGGCTTaGGCAGGTGGGAATCCTCTTTTCTCTCCCCATACC | + |
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Preference number: 6 (lower is better) Translates to: ITSLVPRSDSVA*AGGNPLFSPHT Trigger: GGTATGGGGAGAGAAAAGAGGATTCCCACCTGCCCAAGCCACGCTGTCACTTCTCGGGACTAAAGAGGTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
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| CDS CCA 72 bp | AAAAAGCTCAGAAGCTCACACCTGTGTGGATTGCTCTaGTCATACAGGGTGAGCTTCAGGATCCGGCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: KKLRSSHLCGLL*SYRVSFRIRLR Trigger: CCTCAGCCGGATCCTGAAGCTCACCCTGTATGACCAGAGCAATCCACACAGGTGTGAGCTTCTGAGCTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
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| CDS CAA 72 bp | ACCAACAAAAAGCTCAGAAGCTCACACCTGTGTGGATaGCTCTGGTCATACAGGGTGAGCTTCAGGATCCGG | + |
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Preference number: 6 (lower is better) Translates to: TNKKLRSSHLCG*LWSYRVSFRIR Trigger: CCGGATCCTGAAGCTCACCCTGTATGACCAGAGCAATCCACACAGGTGTGAGCTTCTGAGCTTTTTGTTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
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| CDS GCA 72 bp | TTGAACTTCAGGCAGGACTGCTTCTCCTCCAAGGACTaGTTTTCCTCAAACGTTTGGCACCAGCAGCACAAA | + |
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Preference number: 6 (lower is better) Translates to: LNFRQDCFSSKD*FSSNVWHQQHK Trigger: TTTGTGCTGCTGGTGCCAAACGTTTGAGGAAAAGCAGTCCTTGGAGGAGAAGCAGTCCTGCCTGAAGTTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
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| CDS TCA 72 bp | CTGTATTTATTGCTGGACCGGAAGTTGTCATATCCGTaGTCGTTGGCTTTGAACTTCAGGCAGGACTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: LYLLLDRKLSYP*SLALNFRQDCF Trigger: GAAGCAGTCCTGCCTGAAGTTCAAAGCCAACGATCACGGATATGACAACTTCCGGTCCAGCAATAAATACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
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| CDS CAA 72 bp | GATGTATTTAAAAGTCTTGCTGATCTCAATATTTCGTaGGCACGGAGGAGGGAAGGATCTTGGCGGGACTCC | + |
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Preference number: 6 (lower is better) Translates to: DVFKSLADLNIS*ARRREGSWRDS Trigger: GGAGTCCCGCCAAGATCCTTCCCTCCTCCGTGCCAACGAAATATTGAGATCAGCAAGACTTTTAAATACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
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| CDS CCA 72 bp | ATGTATTTAAAAGTCTTGCTGATCTCAATATTTCGTTaGCACGGAGGAGGGAAGGATCTTGGCGGGACTCCA | + |
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Preference number: 6 (lower is better) Translates to: MYLKVLLISIFR*HGGGKDLGGTP Trigger: TGGAGTCCCGCCAAGATCCTTCCCTCCTCCGTGCCAACGAAATATTGAGATCAGCAAGACTTTTAAATACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
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| CDS CAA 90 bp | ACGAACACGAGGCACGACACAATCGTGTTGATGTATTTAAAAGTCTaGCTGATCTCAATATTTCGTTGGCACGGAGGAGGGAAGGATCTT | + |
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Preference number: 6 (lower is better) Translates to: TNTRHDTIVLMYLKV*LISIFRWHGGGKDL Trigger: AAGATCCTTCCCTCCTCCGTGCCAACGAAATATTGAGATCAGCAAGACTTTTAAATACATCAACACGATTGTGTCGTGCCTCGTGTTCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
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| CDS CAA 90 bp | TTCCCGATGATGCCTAGCACGAACACGAGGCACGACACAATCGTGTaGATGTATTTAAAAGTCTTGCTGATCTCAATATTTCGTTGGCAC | + |
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Preference number: 6 (lower is better) Translates to: FPMMPSTNTRHDTIV*MYLKVLLISIFRWH Trigger: GTGCCAACGAAATATTGAGATCAGCAAGACTTTTAAATACATCAACACGATTGTGTCGTGCCTCGTGTTCGTGCTAGGCATCATCGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
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| CDS TCA 72 bp | GATCATTCAAAGCAATCTGCATACCGCTCTTCTTCCTaGGCATTTCGCAGGTCATCAGGGTATAAAAGACTG | + |
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Preference number: 6 (lower is better) Translates to: DHSKQSAYRSSS*AFRRSSGYKRL Trigger: CAGTCTTTTATACCCTGATGACCTGCGAAATGCTCAGGAAGAAGAGCGGTATGCAGATTGCTTTGAATGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
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| CDS CAA 72 bp | AGGCACGACACAATCGTGTTGATGTATTTAAAAGTCTaGCTGATCTCAATATTTCGTTGGCACGGAGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: RHDTIVLMYLKV*LISIFRWHGGG Trigger: CCCTCCTCCGTGCCAACGAAATATTGAGATCAGCAAGACTTTTAAATACATCAACACGATTGTGTCGTGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022718.11 ENSMUST00000172237.2 ENSMUST00000227824.2 |
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