Pregenerated sensors for EDNRA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031616Ensembl transcript IDs: ENSMUST00000034029.8
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGTGCAGGCAGTCTCCCACTCACCGTCCCTGCCTCAGCCTCCAGATaGCGAGTTGGAAGCACAGTGCTATCTCGCCCAAGTATTATTAGT | + |
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Preference number: 1 (lower is better) Translates to: SAGSLPLTVPASASR*RVGSTVLSRPSIIS Trigger: ACTAATAATACTTGGGCGAGATAGCACTGTGCTTCCAACTCGGCATCTGGAGGCTGAGGCAGGGACGGTGAGTGGGAGACTGCCTGCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| 3UTR GCA 90 bp | TCACCGTCCCTGCCTCAGCCTCCAGATGCCGAGTTGGAAGCACAGTaGTATCTCGCCCAAGTATTATTAGTACTTTGGGAGGCAGAAGCA | + |
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Preference number: 1 (lower is better) Translates to: SPSLPQPPDAELEAQ*YLAQVLLVLWEAEA Trigger: TGCTTCTGCCTCCCAAAGTACTAATAATACTTGGGCGAGATAGCACTGTGCTTCCAACTCGGCATCTGGAGGCTGAGGCAGGGACGGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| 3UTR CCA 90 bp | TGCAGCATTGGGAAGGTTGAGACCCACTGCTCTAGAATCTTAGGATaGACAGTTCCCACCAGCTGGTCCATAGAACTGCACGGAAGCTGG | + |
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Preference number: 1 (lower is better) Translates to: CSIGKVETHCSRILG*TVPTSWSIELHGSW Trigger: CCAGCTTCCGTGCAGTTCTATGGACCAGCTGGTGGGAACTGTCCATCCTAAGATTCTAGAGCAGTGGGTCTCAACCTTCCCAATGCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| 3UTR CCA 90 bp | GAGTTGGAAGCACAGTGCTATCTCGCCCAAGTATTATTAGTACTTTaGGAGGCAGAAGCAGGAGGATCTCTGCGAGTTCAAGGCCAGCCT | + |
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Preference number: 1 (lower is better) Translates to: ELEAQCYLAQVLLVL*EAEAGGSLRVQGQP Trigger: AGGCTGGCCTTGAACTCGCAGAGATCCTCCTGCTTCTGCCTCCCAAAGTACTAATAATACTTGGGCGAGATAGCACTGTGCTTCCAACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| 3UTR GCA 90 bp | AGGTTCTTAAAGATTCTTTGTCTAGCAGCTACTAAGCTGCCGTGCTaGTGGTCTGTGTCTGTGTCTGCAGCAGCTGTGGAAATCATGGTT | + |
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Preference number: 1 (lower is better) Translates to: RFLKILCLAATKLPC*WSVSVSAAAVEIMV Trigger: AACCATGATTTCCACAGCTGCTGCAGACACAGACACAGACCAGCAGCACGGCAGCTTAGTAGCTGCTAGACAAAGAATCTTTAAGAACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| 3UTR GCA 90 bp | TACAGGTTCTTAAAGATTCTTTGTCTAGCAGCTACTAAGCTGCCGTaGTGCTGGTCTGTGTCTGTGTCTGCAGCAGCTGTGGAAATCATG | + |
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Preference number: 1 (lower is better) Translates to: YRFLKILCLAATKLP*CWSVSVSAAAVEIM Trigger: CATGATTTCCACAGCTGCTGCAGACACAGACACAGACCAGCAGCACGGCAGCTTAGTAGCTGCTAGACAAAGAATCTTTAAGAACCTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| 3UTR TCA 90 bp | GAATCTGCCATAACTTTGAAACACTTTTTGTCTGTTTGTGTCTTGTaGGAACAGGTAGCCCTGGCTTTTCCGAACTATGTTGATGAGGCT | + |
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Preference number: 1 (lower is better) Translates to: ESAITLKHFLSVCVL*EQVALAFPNYVDEA Trigger: AGCCTCATCAACATAGTTCGGAAAAGCCAGGGCTACCTGTTCTCACAAGACACAAACAGACAAAAAGTGTTTCAAAGTTATGGCAGATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| 3UTR-3UTR TCA 90 bp | CCCATTGGCTATAGCTGGGACCGGTCCACCACGTGCTGTTGGGAGGGCAGGAGATTCCATCCTAGGACTTaGAGGCACACGTCTCGGTGT | + |
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Preference number: 2 (lower is better) Translates to: PIGYSWDRSTTCCWEGRRFHPRT*RHTSRC Trigger: ACACCGAGACGTGTGCCTTCAAGTCCTAGGATGGAA...TCTCCTGCCCTCCCAACAGCACGTGGTGGACCGGTCCCAGCTATAGCCAATGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| 3UTR CAA 90 bp | ACATGCGCGGTATGCAAATCATATACAGTACTCAGGAAAGACCCATaGGCTATAGCTGGGACCGGTCCACCACGTGCTGTTGGGAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: TCAVCKSYTVLRKDP*AIAGTGPPRAVGRA Trigger: TGCCCTCCCAACAGCACGTGGTGGACCGGTCCCAGCTATAGCCAATGGGTCTTTCCTGAGTACTGTATATGATTTGCATACCGCGCATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| 3UTR CAA 90 bp | CGAGTTGGAAGCACAGTGCTATCTCGCCCAAGTATTATTAGTACTTaGGGAGGCAGAAGCAGGAGGATCTCTGCGAGTTCAAGGCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: RVGSTVLSRPSIIST*GGRSRRISASSRPA Trigger: GGCTGGCCTTGAACTCGCAGAGATCCTCCTGCTTCTGCCTCCCAAAGTACTAATAATACTTGGGCGAGATAGCACTGTGCTTCCAACTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| 3UTR-3UTR GCA 90 bp | GTCTCACAATCAGAGAGGAGCAAAGAGTTAAAGGTTCATGGCAAGTGTAACTACAAGCAGGAGGATCTCTaGGAGTTCAAGGCCAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: VSQSERSKELKVHGKCNYKQEDL*EFKASL Trigger: CAGGCTGGCCTTGAACTCGCAGAGATCCTCCTGCTT...GTAGTTACACTTGCCATGAACCTTTAACTCTTTGCTCCTCTCTGATTGTGAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| 3UTR CAA 90 bp | CCAGTAGAGTTACCAGGGCCCTTTGAAATAGTGACCACTGAGGAGTaGGGGACAGGATGGAAATTTAAGTTTGTCTCACAATCAGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: PVELPGPFEIVTTEE*GTGWKFKFVSQSER Trigger: CCTCTCTGATTGTGAGACAAACTTAAATTTCCATCCTGTCCCCAACTCCTCAGTGGTCACTATTTCAAAGGGCCCTGGTAACTCTACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| 3UTR-3UTR TCA 90 bp | TCTGTGTCTGTGTCTGCAGCAGCTGTGGAAATCATGGTTTCCAAACAAAACAGTCTAACCTTGAACACCTaGCCATCTTCCCTCACCTCT | + |
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Preference number: 2 (lower is better) Translates to: SVSVSAAAVEIMVSKQNSLTLNT*PSSLTS Trigger: AGAGGTGAGGGAAGATGGTCAGGTGTTCAAGGTTAG...ACTGTTTTGTTTGGAAACCATGATTTCCACAGCTGCTGCAGACACAGACACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| 3UTR-3UTR CCA 90 bp | GTCTCACAATCAGAGAGGAGCAAAGAGTTAAAGGTTCATGGCAAGTGTAACTACAGACTTGGGAGGTTTTaGGAGCGCATCTGTGGCGTA | + |
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Preference number: 2 (lower is better) Translates to: VSQSERSKELKVHGKCNYRLGRF*ERICGV Trigger: TACGCCACAGATGCGCTCCCAAAACCTCCCAAGTCT...GTAGTTACACTTGCCATGAACCTTTAACTCTTTGCTCCTCTCTGATTGTGAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| 3UTR-3UTR CCA 90 bp | GTCTCACAATCAGAGAGGAGCAAAGAGTTAAAGGTTCATGGCAAGTGTAACTACCTTAGAAAAGGAGCATaGGAGAGACTTGGGAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: VSQSERSKELKVHGKCNYLRKGA*ERLGRF Trigger: AAACCTCCCAAGTCTCTCCCATGCTCCTTTTCTAAG...GTAGTTACACTTGCCATGAACCTTTAACTCTTTGCTCCTCTCTGATTGTGAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| 3UTR-3UTR TCA 90 bp | GTCTCACAATCAGAGAGGAGCAAAGAGTTAAAGGTTCATGGCAAGTGTAACTACCACTGTAGGAGAAACTaGGAGAGTCAAAGGAAACAT | + |
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Preference number: 2 (lower is better) Translates to: VSQSERSKELKVHGKCNYHCRRN*ESQRKH Trigger: ATGTTTCCTTTGACTCTCTCAGTTTCTCCTACAGTG...GTAGTTACACTTGCCATGAACCTTTAACTCTTTGCTCCTCTCTGATTGTGAGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| 3UTR-3UTR GCA 90 bp | GTCTCACAATCAGAGAGGAGCAAAGAGTTAAAGGTTCATGGCAAGTGTAACTACGTGTTGGAAATGACATaGGCGGTATGCAAATCATAT | + |
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Preference number: 2 (lower is better) Translates to: VSQSERSKELKVHGKCNYVLEMT*AVCKSY Trigger: ATATGATTTGCATACCGCGCATGTCATTTCCAACAC...GTAGTTACACTTGCCATGAACCTTTAACTCTTTGCTCCTCTCTGATTGTGAGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| 3UTR-3UTR GCA 90 bp | GTCTCACAATCAGAGAGGAGCAAAGAGTTAAAGGTTCATGGCAAGTGTAACTACTTTGACATTGTTTCCTaGCAGGAAAAAGGAATGAGC | + |
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Preference number: 2 (lower is better) Translates to: VSQSERSKELKVHGKCNYFDIVS*QEKGMS Trigger: GCTCATTCCTTTTTCCTGGCAGGAAACAATGTCAAA...GTAGTTACACTTGCCATGAACCTTTAACTCTTTGCTCCTCTCTGATTGTGAGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGTGTCTGTGTCTGCAGCAGCTGTGGAAATCATGGTTTCCAAACAAAACAGTATTTCTAGGGTACCATaGAGTTATAAAGTACCAACA | + |
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Preference number: 2 (lower is better) Translates to: SVSVSAAAVEIMVSKQNSISRVP*SYKVPT Trigger: TGTTGGTACTTTATAACTGCATGGTACCCTAGAAAT...ACTGTTTTGTTTGGAAACCATGATTTCCACAGCTGCTGCAGACACAGACACAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| 3UTR CCA 72 bp | ATTGGCTATAGCTGGGACCGGTCCACCACGTGCTGTTaGGAGGGCAGGAGAGCTTTTCCTAGGATGGACTTA | + |
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Preference number: 3 (lower is better) Translates to: IGYSWDRSTTCC*EGRRAFPRMDL Trigger: TAAGTCCATCCTAGGAAAAGCTCTCCTGCCCTCCCAACAGCACGTGGTGGACCGGTCCCAGCTATAGCCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| 3UTR CCA 72 bp | GGGAAGGTTGAGACCCACTGCTCTAGAATCTTAGGATaGACAGTTCCCACCAGCTGGTCCATAGAACTGCAC | + |
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Preference number: 3 (lower is better) Translates to: GKVETHCSRILG*TVPTSWSIELH Trigger: GTGCAGTTCTATGGACCAGCTGGTGGGAACTGTCCATCCTAAGATTCTAGAGCAGTGGGTCTCAACCTTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| 3UTR-3UTR CAA 90 bp | TCATGGGCCATGAAACGCAACAGAATTTCTAGGGCAGTGGTTCTCAACTTGTGGGAGCATGGGAGAGACTaGGGAGGTTTTGGGAGCGCA | + |
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Preference number: 3 (lower is better) Translates to: SWAMKRNRISRAVVLNLWEHGRD*GGFGSA Trigger: TGCGCTCCCAAAACCTCCCAAGTCTCTCCCATGCTC...CCACAAGTTGAGAACCACTGCCCTAGAAATTCTGTTGCGTTTCATGGCCCATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| 3UTR-3UTR CAA 90 bp | TCTGTGTCTGTGTCTGCAGCAGCTGTGGAAATCATGGTTTCCAAACAAAACAGTGTCCACCACGTGCTGTaGGGAGGGCAGGAGAGCTTT | + |
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Preference number: 3 (lower is better) Translates to: SVSVSAAAVEIMVSKQNSVHHVL*GGQESF Trigger: AAAGCTCTCCTGCCCTCCCAACAGCACGTGGTGGAC...ACTGTTTTGTTTGGAAACCATGATTTCCACAGCTGCTGCAGACACAGACACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| 3UTR GCA 72 bp | AAGATTCTTTGTCTAGCAGCTACTAAGCTGCCGTGCTaGTGGTCTGTGTCTGTGTCTGCAGCAGCTGTGGAA | + |
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Preference number: 3 (lower is better) Translates to: KILCLAATKLPC*WSVSVSAAAVE Trigger: TTCCACAGCTGCTGCAGACACAGACACAGACCAGCAGCACGGCAGCTTAGTAGCTGCTAGACAAAGAATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| 3UTR GCA 72 bp | TTAAAGATTCTTTGTCTAGCAGCTACTAAGCTGCCGTaGTGCTGGTCTGTGTCTGTGTCTGCAGCAGCTGTG | + |
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Preference number: 3 (lower is better) Translates to: LKILCLAATKLP*CWSVSVSAAAV Trigger: CACAGCTGCTGCAGACACAGACACAGACCAGCAGCACGGCAGCTTAGTAGCTGCTAGACAAAGAATCTTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| 3UTR-3UTR CAA 90 bp | GTCTCACAATCAGAGAGGAGCAAAGAGTTAAAGGTTCATGGCAAGTGTAACTACGCAGTGGTTCTCAACTaGTGGGTTGCTAATGACCCT | + |
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Preference number: 3 (lower is better) Translates to: VSQSERSKELKVHGKCNYAVVLN*WVANDP Trigger: AGGGTCATTAGCAACCCACAAGTTGAGAACCACTGC...GTAGTTACACTTGCCATGAACCTTTAACTCTTTGCTCCTCTCTGATTGTGAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| 3UTR-3UTR CAA 90 bp | TCTGTGTCTGTGTCTGCAGCAGCTGTGGAAATCATGGTTTCCAAACAAAACAGTCTTTTCCGAACTATGTaGATGAGGCTAACCTTGAAC | + |
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Preference number: 3 (lower is better) Translates to: SVSVSAAAVEIMVSKQNSLFRTM*MRLTLN Trigger: GTTCAAGGTTAGCCTCATCAACATAGTTCGGAAAAG...ACTGTTTTGTTTGGAAACCATGATTTCCACAGCTGCTGCAGACACAGACACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| 3UTR-3UTR CAA 90 bp | GTCTCACAATCAGAGAGGAGCAAAGAGTTAAAGGTTCATGGCAAGTGTAACTACTTGGCCACTTTGACATaGTTTCCTGCCAGGAAAAAG | + |
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Preference number: 3 (lower is better) Translates to: VSQSERSKELKVHGKCNYLATLT*FPARKK Trigger: CTTTTTCCTGGCAGGAAACAATGTCAAAGTGGCCAA...GTAGTTACACTTGCCATGAACCTTTAACTCTTTGCTCCTCTCTGATTGTGAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| 3UTR TCA 72 bp | GAAAGCCTGGTAGCCAGTCATCACTGTAGGAGAAACTaGGAGAGTCAAAGGAAACATGCATTATATATGTGC | + |
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Preference number: 3 (lower is better) Translates to: ESLVASHHCRRN*ESQRKHALYMC Trigger: GCACATATATAATGCATGTTTCCTTTGACTCTCTCAGTTTCTCCTACAGTGATGACTGGCTACCAGGCTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| 3UTR CCA 72 bp | TTTGAAATAGTGACCACTGAGGAGTTGGGGACAGGATaGAAATTTAAGTTTGTCTCACAATCAGAGAGGAGC | + |
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Preference number: 3 (lower is better) Translates to: FEIVTTEELGTG*KFKFVSQSERS Trigger: GCTCCTCTCTGATTGTGAGACAAACTTAAATTTCCATCCTGTCCCCAACTCCTCAGTGGTCACTATTTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| 3UTR-3UTR CAA 90 bp | GTCTCACAATCAGAGAGGAGCAAAGAGTTAAAGGTTCATGGCAAGTGTAACTACTCTAATTTTCAAGTGTaGGAAATGACATGCGCGGTA | + |
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Preference number: 3 (lower is better) Translates to: VSQSERSKELKVHGKCNYSNFQV*EMTCAV Trigger: TACCGCGCATGTCATTTCCAACACTTGAAAATTAGA...GTAGTTACACTTGCCATGAACCTTTAACTCTTTGCTCCTCTCTGATTGTGAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| 3UTR GCA 72 bp | TCTAATTTTCAAGTGTTGGAAATGACATGCGCGGTATaGAAATCATATACAGTACTCAGGAAAGACCCATTG | + |
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Preference number: 3 (lower is better) Translates to: SNFQVLEMTCAV*KSYTVLRKDPL Trigger: CAATGGGTCTTTCCTGAGTACTGTATATGATTTGCATACCGCGCATGTCATTTCCAACACTTGAAAATTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| 3UTR GCA 72 bp | TTGAAAGAAGATGAAACGATCATTTCTAGGGTACCATaGAGTTATAAAGTACCAACACTCGGTGACATTTCC | + |
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Preference number: 3 (lower is better) Translates to: LKEDETIISRVP*SYKVPTLGDIS Trigger: GGAAATGTCACCGAGTGTTGGTACTTTATAACTGCATGGTACCCTAGAAATGATCGTTTCATCTTCTTTCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| CDS-3UTR TCA 90 bp | CCCATTGGCTATAGCTGGGACCGGTCCACCACGTGCTGTTGGGAGGGCAGGAGAAAAATGCGGCTTAAGTaGAGAGGGAACCAGCACAGG | + |
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Preference number: 4 (lower is better) Translates to: PIGYSWDRSTTCCWEGRRKMRLK*RGNQHR Trigger: CCTGTGCTGGTTCCCTCTTCACTTAAGCCGCATTTT...TCTCCTGCCCTCCCAACAGCACGTGGTGGACCGGTCCCAGCTATAGCCAATGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| CDS-3UTR TCA 90 bp | TATAGCTGGGACCGGTCCACCACGTGCTGTTGGGAGGGCAGGAGAGCTTTTCCTATTCGAAGGGTACCATaGCGAAGCCGATTGCTTCCG | + |
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Preference number: 4 (lower is better) Translates to: YSWDRSTTCCWEGRRAFPIRRVP*RSRLLP Trigger: CGGAAGCAATCGGCTTCGTCATGGTACCCTTCGAAT...AGGAAAAGCTCTCCTGCCCTCCCAACAGCACGTGGTGGACCGGTCCCAGCTATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| CDS-3UTR GCA 90 bp | CCCATTGGCTATAGCTGGGACCGGTCCACCACGTGCTGTTGGGAGGGCAGGAGAGCAGAAGACAGTCTTTaGCACTTCTCGACGCTGTTT | + |
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Preference number: 4 (lower is better) Translates to: PIGYSWDRSTTCCWEGRRAEDSL*HFSTLF Trigger: AAACAGCGTCGAGAAGTGGCAAAGACTGTCTTCTGC...TCTCCTGCCCTCCCAACAGCACGTGGTGGACCGGTCCCAGCTATAGCCAATGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| CDS-3UTR CCA 90 bp | TATAGCTGGGACCGGTCCACCACGTGCTGTTGGGAGGGCAGGAGAGCTTTTCCTCTCCGTTCCGTGTTGTaGTTGTTCTGCTCTTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: YSWDRSTTCCWEGRRAFPLRSVL*LFCSWF Trigger: GAACCAAGAGCAGAACAACCACAACACGGAACGGAG...AGGAAAAGCTCTCCTGCCCTCCCAACAGCACGTGGTGGACCGGTCCCAGCTATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| CDS-3UTR GCA 90 bp | TGGGAGGGCAGGAGAGCTTTTCCTAGGATGGACTTAGAAAAGGAGCATGGGAGACCCACGGAGGACTTCTaGAGGAAGGGGAACAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: WEGRRAFPRMDLEKEHGRPTEDF*RKGNSL Trigger: CAAGCTGTTCCCCTTCCTGCAGAAGTCCTCCGTGGG...TCTCCCATGCTCCTTTTCTAAGTCCATCCTAGGAAAAGCTCTCCTGCCCTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| CDS-3UTR GCA 90 bp | TATAGCTGGGACCGGTCCACCACGTGCTGTTGGGAGGGCAGGAGAGCTTTTCCTTGCACACCAAGGGCATaGAGAAGTAGAACCCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: YSWDRSTTCCWEGRRAFPCTPRA*RSRTQR Trigger: TCTTTGGGTTCTACTTCTGCATGCCCTTGGTGTGCA...AGGAAAAGCTCTCCTGCCCTCCCAACAGCACGTGGTGGACCGGTCCCAGCTATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| CDS-3UTR GCA 90 bp | CCCATTGGCTATAGCTGGGACCGGTCCACCACGTGCTGTTGGGAGGGCAGGAGAGAGCTATTGGGTTTATaGAAGAATTCATGGTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: PIGYSWDRSTTCCWEGRRELLGL*KNSWLP Trigger: TGGCAACCATGAATTCTTGCATAAACCCAATAGCTC...TCTCCTGCCCTCCCAACAGCACGTGGTGGACCGGTCCCAGCTATAGCCAATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| CDS-3UTR TCA 90 bp | CCCATTGGCTATAGCTGGGACCGGTCCACCACGTGCTGTTGGGAGGGCAGGAGAACTTGTTTTGGTAAATaGTTCGTAGTAGAGTTGCGT | + |
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Preference number: 4 (lower is better) Translates to: PIGYSWDRSTTCCWEGRRTCFGK*FVVELR Trigger: ACGCAACTCTACTACGAATCATTTACCAAAACAAGT...TCTCCTGCCCTCCCAACAGCACGTGGTGGACCGGTCCCAGCTATAGCCAATGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| CDS-3UTR CCA 90 bp | TATAGCTGGGACCGGTCCACCACGTGCTGTTGGGAGGGCAGGAGAGCTTTTCCTTCTTGGTTCTTCCACTaGATACTCGTTCCATTCATG | + |
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Preference number: 4 (lower is better) Translates to: YSWDRSTTCCWEGRRAFPSWFFH*ILVPFM Trigger: CATGAATGGAACGAGTATCCAGTGGAAGAACCAAGA...AGGAAAAGCTCTCCTGCCCTCCCAACAGCACGTGGTGGACCGGTCCCAGCTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| CDS-3UTR TCA 90 bp | TCATGGGCCATGAAACGCAACAGAATTTCTAGGGCAGTGGTTCTCAACTTGTGGAGAGGTTCAAGACGGTaGTGCCCACGGAGGACTTCT | + |
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Preference number: 4 (lower is better) Translates to: SWAMKRNRISRAVVLNLWRGSRR*CPRRTS Trigger: AGAAGTCCTCCGTGGGCATCACCGTCTTGAACCTCT...CCACAAGTTGAGAACCACTGCCCTAGAAATTCTGTTGCGTTTCATGGCCCATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| CDS-3UTR TCA 90 bp | TCTGTGTCTGTGTCTGCAGCAGCTGTGGAAATCATGGTTTCCAAACAAAACAGTGGGATCCCGATTCCTTaGACTCGGCTCCAGGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: SVSVSAAAVEIMVSKQNSGIPIP*TRLQEA Trigger: GGCTTCCTGGAGCCGAGTTCAAGGAATCGGGATCCC...ACTGTTTTGTTTGGAAACCATGATTTCCACAGCTGCTGCAGACACAGACACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| CDS-3UTR TCA 90 bp | TCTGTGTCTGTGTCTGCAGCAGCTGTGGAAATCATGGTTTCCAAACAAAACAGTTGGGGACCGAGGTCATaGGGCTTTTGGACTGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: SVSVSAAAVEIMVSKQNSWGPRS*GFWTGD Trigger: GTCACCAGTCCAAAAGCCTCATGACCTCGGTCCCCA...ACTGTTTTGTTTGGAAACCATGATTTCCACAGCTGCTGCAGACACAGACACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| CDS-3UTR CCA 90 bp | TCATGGGCCATGAAACGCAACAGAATTTCTAGGGCAGTGGTTCTCAACTTGTGGTTCATGCTGTCCTTGTaGCTGCTCCGTTCCGTGTTG | + |
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Preference number: 4 (lower is better) Translates to: SWAMKRNRISRAVVLNLWFMLSL*LLRSVL Trigger: CAACACGGAACGGAGCAGCCACAAGGACAGCATGAA...CCACAAGTTGAGAACCACTGCCCTAGAAATTCTGTTGCGTTTCATGGCCCATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| 3UTR CAA 72 bp | GTATGCAAATCATATACAGTACTCAGGAAAGACCCATaGGCTATAGCTGGGACCGGTCCACCACGTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VCKSYTVLRKDP*AIAGTGPPRAV Trigger: AACAGCACGTGGTGGACCGGTCCCAGCTATAGCCAATGGGTCTTTCCTGAGTACTGTATATGATTTGCATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| 3UTR CAA 72 bp | AGCACAGTGCTATCTCGCCCAAGTATTATTAGTACTTaGGGAGGCAGAAGCAGGAGGATCTCTGCGAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: STVLSRPSIIST*GGRSRRISASS Trigger: TGAACTCGCAGAGATCCTCCTGCTTCTGCCTCCCAAAGTACTAATAATACTTGGGCGAGATAGCACTGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS-3UTR GCA 90 bp | TCATGGGCCATGAAACGCAACAGAATTTCTAGGGCAGTGGTTCTCAACTTGTGGTGTAGAAGATTGCTGTaGACACCAAGGGCATGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SWAMKRNRISRAVVLNLWCRRLL*TPRACR Trigger: TCTGCATGCCCTTGGTGTGCACAGCAATCTTCTACA...CCACAAGTTGAGAACCACTGCCCTAGAAATTCTGTTGCGTTTCATGGCCCATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTGTCTGTGTCTGCAGCAGCTGTGGAAATCATGGTTTCCAAACAAAACAGTTTACGCCTCCCACCATaGTCAGCCAAAAGTATGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SVSVSAAAVEIMVSKQNSLRLPP*SAKSMP Trigger: CGGCATACTTTTGGCTGACCATGGTGGGAGGCGTAA...ACTGTTTTGTTTGGAAACCATGATTTCCACAGCTGCTGCAGACACAGACACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS-3UTR TCA 90 bp | GTCTCACAATCAGAGAGGAGCAAAGAGTTAAAGGTTCATGGCAAGTGTAACTACCCGGGATGGCCAAGATaGAGGAAAGAATCCAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: VSQSERSKELKVHGKCNYPGWPR*RKESRW Trigger: CCATCTGGATTCTTTCCTTCATCTTGGCCATCCCGG...GTAGTTACACTTGCCATGAACCTTTAACTCTTTGCTCCTCTCTGATTGTGAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS-3UTR TCA 90 bp | TCTGTGTCTGTGTCTGCAGCAGCTGTGGAAATCATGGTTTCCAAACAAAACAGTGCATCTCACAGGTCATaGGGGTGTAGAAGATTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVSVSAAAVEIMVSKQNSASHRS*GCRRLL Trigger: CAGCAATCTTCTACACCCTCATGACCTGTGAGATGC...ACTGTTTTGTTTGGAAACCATGATTTCCACAGCTGCTGCAGACACAGACACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS-3UTR TCA 90 bp | GTCTCACAATCAGAGAGGAGCAAAGAGTTAAAGGTTCATGGCAAGTGTAACTACTGTACCTGTCCACACTaGGAGCACAGAGGTTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VSQSERSKELKVHGKCNYCTCPH*EHRGSR Trigger: TCTTGAACCTCTGTGCTCTCAGTGTGGACAGGTACA...GTAGTTACACTTGCCATGAACCTTTAACTCTTTGCTCCTCTCTGATTGTGAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS-3UTR GCA 90 bp | GTCTCACAATCAGAGAGGAGCAAAGAGTTAAAGGTTCATGGCAAGTGTAACTACGAGGGTGTAGAAGATTaGTGTGCACACCAAGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VSQSERSKELKVHGKCNYEGVED*CAHQGH Trigger: ATGCCCTTGGTGTGCACAGCAATCTTCTACACCCTC...GTAGTTACACTTGCCATGAACCTTTAACTCTTTGCTCCTCTCTGATTGTGAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS-3UTR GCA 90 bp | TCATGGGCCATGAAACGCAACAGAATTTCTAGGGCAGTGGTTCTCAACTTGTGGGCAAGAATTCATGGTTaGCAGGTTAATGCCGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: SWAMKRNRISRAVVLNLWARIHG*QVNADV Trigger: TACATCGGCATTAACCTGGCAACCATGAATTCTTGC...CCACAAGTTGAGAACCACTGCCCTAGAAATTCTGTTGCGTTTCATGGCCCATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTGTCTGTGTCTGCAGCAGCTGTGGAAATCATGGTTTCCAAACAAAACAGTACTCCAAAATCATTGTaGTCGAAAGGCCAGCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SVSVSAAAVEIMVSKQNSTPKSL*SKGQRP Trigger: AGGACGCTGGCCTTTCGACCACAATGATTTTGGAGT...ACTGTTTTGTTTGGAAACCATGATTTCCACAGCTGCTGCAGACACAGACACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS-3UTR GCA 90 bp | TCTGTGTCTGTGTCTGCAGCAGCTGTGGAAATCATGGTTTCCAAACAAAACAGTGGAAGGGGAACAGCTTaGAGAGAAACACTCCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SVSVSAAAVEIMVSKQNSGRGTA*RETLQN Trigger: ATTTTGGAGTGTTTCTCTGCAAGCTGTTCCCCTTCC...ACTGTTTTGTTTGGAAACCATGATTTCCACAGCTGCTGCAGACACAGACACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS-3UTR CCA 90 bp | GTCTCACAATCAGAGAGGAGCAAAGAGTTAAAGGTTCATGGCAAGTGTAACTACAGGAAAGAATCCAGATaGAGACGATTTCAATGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VSQSERSKELKVHGKCNYRKESR*RRFQWR Trigger: CCGCCATTGAAATCGTCTCCATCTGGATTCTTTCCT...GTAGTTACACTTGCCATGAACCTTTAACTCTTTGCTCCTCTCTGATTGTGAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS-3UTR TCA 90 bp | GTCTCACAATCAGAGAGGAGCAAAGAGTTAAAGGTTCATGGCAAGTGTAACTACCAACAGAGGCAGGACTaGAAACAATTTTTGAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSQSERSKELKVHGKCNYQQRQD*KQFLNF Trigger: GAAATTCAAAAATTGTTTTCAGTCCTGCCTCTGTTG...GTAGTTACACTTGCCATGAACCTTTAACTCTTTGCTCCTCTCTGATTGTGAGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| 3UTR CAA 72 bp | AGTGTAACTACATCTCACTTAACACAATCAGCTCATTaGGCCACTTTGACATTGTTTCCTGCCAGGAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SVTTSHLTQSAH*ATLTLFPARKK Trigger: CTTTTTCCTGGCAGGAAACAATGTCAAAGTGGCCAAATGAGCTGATTGTGTTAAGTGAGATGTAGTTACACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS-3UTR CAA 90 bp | CCCATTGGCTATAGCTGGGACCGGTCCACCACGTGCTGTTGGGAGGGCAGGAGACTGGCTATGAGCGCATaGGGGCCGTTCCTCATACAC | + |
|
Preference number: 5 (lower is better) Translates to: PIGYSWDRSTTCCWEGRRLAMSA*GPFLIH Trigger: GTGTATGAGGAACGGCCCCAATGCGCTCATAGCCAG...TCTCCTGCCCTCCCAACAGCACGTGGTGGACCGGTCCCAGCTATAGCCAATGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS-3UTR CAA 90 bp | CCCATTGGCTATAGCTGGGACCGGTCCACCACGTGCTGTTGGGAGGGCAGGAGACCGTGCATTGAGCCATaGCTAGGCAGGGCCAAATTA | + |
|
Preference number: 5 (lower is better) Translates to: PIGYSWDRSTTCCWEGRRPCIEP*LGRAKL Trigger: TAATTTGGCCCTGCCTAGCAATGGCTCAATGCACGG...TCTCCTGCCCTCCCAACAGCACGTGGTGGACCGGTCCCAGCTATAGCCAATGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS-3UTR CAA 90 bp | CCCATTGGCTATAGCTGGGACCGGTCCACCACGTGCTGTTGGGAGGGCAGGAGACGTTCCGTGTTGTGGTaGTTCTGCTCTTGGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PIGYSWDRSTTCCWEGRRRSVLW*FCSWFF Trigger: GAAGAACCAAGAGCAGAACAACCACAACACGGAACG...TCTCCTGCCCTCCCAACAGCACGTGGTGGACCGGTCCCAGCTATAGCCAATGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS GCA 90 bp | ACCAAGCAGAAGACAGTCTTTGCCACTTCTCGACGCTGTTTGAGGTaGTCACTAAGGGCGATCCGCAAGCTGCCGTTCCTCCTGTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TKQKTVFATSRRCLR*SLRAIRKLPFLLLS Trigger: GCTCAACAGGAGGAACGGCAGCTTGCGGATCGCCCTTAGTGAGCACCTCAAACAGCGTCGAGAAGTGGCAAAGACTGTCTTCTGCTTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS GCA 90 bp | AATCAAGGGGATCCCGATTCCTTGAACTCGGCTCCAGGAAGCCACTaGTCTGTACCTGTCCACACTGAGAGCACAGAGGTTCAAGACGGT | + |
|
Preference number: 5 (lower is better) Translates to: NQGDPDSLNSAPGSH*SVPVHTESTEVQDG Trigger: ACCGTCTTGAACCTCTGTGCTCTCAGTGTGGACAGGTACAGAGCAGTGGCTTCCTGGAGCCGAGTTCAAGGAATCGGGATCCCCTTGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS GCA 90 bp | GAACCAGCACAGGGCGAAGATGACAACCAAGCAGAAGACAGTCTTTaGCACTTCTCGACGCTGTTTGAGGTGCTCACTAAGGGCGATCCG | + |
|
Preference number: 5 (lower is better) Translates to: EPAQGEDDNQAEDSL*HFSTLFEVLTKGDP Trigger: CGGATCGCCCTTAGTGAGCACCTCAAACAGCGTCGAGAAGTGGCAAAGACTGTCTTCTGCTTGGTTGTCATCTTCGCCCTGTGCTGGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS CCA 90 bp | CTGTCCTTGTGGCTGCTCCGTTCCGTGTTGTGGTTGTTCTGCTCTTaGTTCTTCCACTGGATACTCGTTCCATTCATGGGGACCGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LSLWLLRSVLWLFCS*FFHWILVPFMGTEV Trigger: GACCTCGGTCCCCATGAATGGAACGAGTATCCAGTGGAAGAACCAAGAGCAGAACAACCACAACACGGAACGGAGCAGCCACAAGGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS TCA 90 bp | GAAAGCTGTCGTGATTTTAGTCTGCTGTGGGCAATAGCCGTGCATTaGGCCATTGCTAGGCAGGGCCAAATTAGGGGGTCGATGGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: ESCRDFSLLWAIAVH*AIARQGQIRGSMGG Trigger: ACCACCCATCGACCCCCTAATTTGGCCCTGCCTAGCAATGGCTCAATGCACGGCTATTGCCCACAGCAGACTAAAATCACGACAGCTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS TCA 90 bp | ATGGAGACGATTTCAATGGCGGTAATCAAGGGGATCCCGATTCCTTaGACTCGGCTCCAGGAAGCCACTGCTCTGTACCTGTCCACACTG | + |
|
Preference number: 5 (lower is better) Translates to: METISMAVIKGIPIP*TRLQEATALYLSTL Trigger: CAGTGTGGACAGGTACAGAGCAGTGGCTTCCTGGAGCCGAGTTCAAGGAATCGGGATCCCCTTGATTACCGCCATTGAAATCGTCTCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS CCA 90 bp | CTGCTCCGTTCCGTGTTGTGGTTGTTCTGCTCTTGGTTCTTCCACTaGATACTCGTTCCATTCATGGGGACCGAGGTCATGAGGCTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLRSVLWLFCSWFFH*ILVPFMGTEVMRLL Trigger: CAAAAGCCTCATGACCTCGGTCCCCATGAATGGAACGAGTATCCAGTGGAAGAACCAAGAGCAGAACAACCACAACACGGAACGGAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS CCA 90 bp | TGCAGGAAGGGGAACAGCTTGCAGAGAAACACTCCAAAATCATTGTaGTCGAAAGGCCAGCGTCCTGCCAAGAGCTTAAACACGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: CRKGNSLQRNTPKSL*SKGQRPAKSLNTLM Trigger: CATCAACGTGTTTAAGCTCTTGGCAGGACGCTGGCCTTTCGACCACAATGATTTTGGAGTGTTTCTCTGCAAGCTGTTCCCCTTCCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS-3UTR CAA 90 bp | TGGGAGGGCAGGAGAGCTTTTCCTAGGATGGACTTAGAAAAGGAGCATGGGAGAAACACTCCAAAATCATaGTGGTCGAAAGGCCAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: WEGRRAFPRMDLEKEHGRNTPKS*WSKGQR Trigger: ACGCTGGCCTTTCGACCACAATGATTTTGGAGTGTT...TCTCCCATGCTCCTTTTCTAAGTCCATCCTAGGAAAAGCTCTCCTGCCCTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS-3UTR CAA 90 bp | TCATGGGCCATGAAACGCAACAGAATTTCTAGGGCAGTGGTTCTCAACTTGTGGAGGAAGGGGAACAGCTaGCAGAGAAACACTCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SWAMKRNRISRAVVLNLWRKGNS*QRNTPK Trigger: TTTTGGAGTGTTTCTCTGCAAGCTGTTCCCCTTCCT...CCACAAGTTGAGAACCACTGCCCTAGAAATTCTGTTGCGTTTCATGGCCCATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS-3UTR CAA 90 bp | TCTGTGTCTGTGTCTGCAGCAGCTGTGGAAATCATGGTTTCCAAACAAAACAGTAGCAGAAGACAGTCTTaGCCACTTCTCGACGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SVSVSAAAVEIMVSKQNSSRRQS*PLLDAV Trigger: AACAGCGTCGAGAAGTGGCAAAGACTGTCTTCTGCT...ACTGTTTTGTTTGGAAACCATGATTTCCACAGCTGCTGCAGACACAGACACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS CCA 72 bp | GAGCCATTGCTAGGCAGGGCCAAATTAGGGGGTCGATaGGTGGTGCCCAGAAAGTTGATCTCCGTCCCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: EPLLGRAKLGGR*VVPRKLISVPG Trigger: TCCGGGGACGGAGATCAACTTTCTGGGCACCACCCATCGACCCCCTAATTTGGCCCTGCCTAGCAATGGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS CAA 90 bp | AACTTGGACGTGGCGTTGAGCATGCAGGTCCTATGCAGCTCGCCCTaGTATTCGAAGGGTACCATGACGAAGCCGATTGCTTCCGGGATG | + |
|
Preference number: 6 (lower is better) Translates to: NLDVALSMQVLCSSP*YSKGTMTKPIASGM Trigger: CATCCCGGAAGCAATCGGCTTCGTCATGGTACCCTTCGAATACAAGGGCGAGCTGCATAGGACCTGCATGCTCAACGCCACGTCCAAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS GCA 72 bp | GATCCCGATTCCTTGAACTCGGCTCCAGGAAGCCACTaGTCTGTACCTGTCCACACTGAGAGCACAGAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: DPDSLNSAPGSH*SVPVHTESTEV Trigger: AACCTCTGTGCTCTCAGTGTGGACAGGTACAGAGCAGTGGCTTCCTGGAGCCGAGTTCAAGGAATCGGGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS GCA 72 bp | AAGACAGTCTTTGCCACTTCTCGACGCTGTTTGAGGTaGTCACTAAGGGCGATCCGCAAGCTGCCGTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: KTVFATSRRCLR*SLRAIRKLPFL Trigger: GAGGAACGGCAGCTTGCGGATCGCCCTTAGTGAGCACCTCAAACAGCGTCGAGAAGTGGCAAAGACTGTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS CAA 72 bp | GTGGCGTTGAGCATGCAGGTCCTATGCAGCTCGCCCTaGTATTCGAAGGGTACCATGACGAAGCCGATTGCT | + |
|
Preference number: 6 (lower is better) Translates to: VALSMQVLCSSP*YSKGTMTKPIA Trigger: AGCAATCGGCTTCGTCATGGTACCCTTCGAATACAAGGGCGAGCTGCATAGGACCTGCATGCTCAACGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS CAA 72 bp | AAGCAGAAGACAGTCTTTGCCACTTCTCGACGCTGTTaGAGGTGCTCACTAAGGGCGATCCGCAAGCTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: KQKTVFATSRRC*RCSLRAIRKLP Trigger: CGGCAGCTTGCGGATCGCCCTTAGTGAGCACCTCAAACAGCGTCGAGAAGTGGCAAAGACTGTCTTCTGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS CAA 90 bp | ATGACAACCAAGCAGAAGACAGTCTTTGCCACTTCTCGACGCTGTTaGAGGTGCTCACTAAGGGCGATCCGCAAGCTGCCGTTCCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: MTTKQKTVFATSRRC*RCSLRAIRKLPFLL Trigger: CAGGAGGAACGGCAGCTTGCGGATCGCCCTTAGTGAGCACCTCAAACAGCGTCGAGAAGTGGCAAAGACTGTCTTCTGCTTGGTTGTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS CAA 90 bp | GCTGTCCTTGTGGCTGCTCCGTTCCGTGTTGTGGTTGTTCTGCTCTaGGTTCTTCCACTGGATACTCGTTCCATTCATGGGGACCGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: AVLVAAPFRVVVVLL*VLPLDTRSIHGDRG Trigger: ACCTCGGTCCCCATGAATGGAACGAGTATCCAGTGGAAGAACCAAGAGCAGAACAACCACAACACGGAACGGAGCAGCCACAAGGACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS TCA 72 bp | CGTGATTTTAGTCTGCTGTGGGCAATAGCCGTGCATTaGGCCATTGCTAGGCAGGGCCAAATTAGGGGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: RDFSLLWAIAVH*AIARQGQIRGS Trigger: CGACCCCCTAATTTGGCCCTGCCTAGCAATGGCTCAATGCACGGCTATTGCCCACAGCAGACTAAAATCACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS GCA 72 bp | ATGAACTTGGACGTGGCGTTGAGCATGCAGGTCCTATaGAGCTCGCCCTTGTATTCGAAGGGTACCATGACG | + |
|
Preference number: 6 (lower is better) Translates to: MNLDVALSMQVL*SSPLYSKGTMT Trigger: CGTCATGGTACCCTTCGAATACAAGGGCGAGCTGCATAGGACCTGCATGCTCAACGCCACGTCCAAGTTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS CAA 90 bp | GATGGAGACGATTTCAATGGCGGTAATCAAGGGGATCCCGATTCCTaGAACTCGGCTCCAGGAAGCCACTGCTCTGTACCTGTCCACACT | + |
|
Preference number: 6 (lower is better) Translates to: DGDDFNGGNQGDPDS*NSAPGSHCSVPVHT Trigger: AGTGTGGACAGGTACAGAGCAGTGGCTTCCTGGAGCCGAGTTCAAGGAATCGGGATCCCCTTGATTACCGCCATTGAAATCGTCTCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS CCA 72 bp | TGGCTGCTCCGTTCCGTGTTGTGGTTGTTCTGCTCTTaGTTCTTCCACTGGATACTCGTTCCATTCATGGGG | + |
|
Preference number: 6 (lower is better) Translates to: WLLRSVLWLFCS*FFHWILVPFMG Trigger: CCCCATGAATGGAACGAGTATCCAGTGGAAGAACCAAGAGCAGAACAACCACAACACGGAACGGAGCAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS CAA 72 bp | ATGTGGCTGCTTAGATTAGCGCTGTATCTCTCCGGATaGTCAGCCATTACGCCTCCCACCATGGTCAGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: MWLLRLALYLSG*SAITPPTMVSQ Trigger: TTGGCTGACCATGGTGGGAGGCGTAATGGCTGACAATCCGGAGAGATACAGCGCTAATCTAAGCAGCCACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS CAA 90 bp | AAGTCTTCCATGTGGCTGCTTAGATTAGCGCTGTATCTCTCCGGATaGTCAGCCATTACGCCTCCCACCATGGTCAGCCAAAAGTATGCC | + |
|
Preference number: 6 (lower is better) Translates to: KSSMWLLRLALYLSG*SAITPPTMVSQKYA Trigger: GGCATACTTTTGGCTGACCATGGTGGGAGGCGTAATGGCTGACAATCCGGAGAGATACAGCGCTAATCTAAGCAGCCACATGGAAGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS CAA 90 bp | GGGCATGCAGAAGTAGAACCCAAAGAGCCACCAGTCCTTCACATCTaGGTAAAACTCCATGAACTTGGACGTGGCGTTGAGCATGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: GHAEVEPKEPPVLHI*VKLHELGRGVEHAG Trigger: ACCTGCATGCTCAACGCCACGTCCAAGTTCATGGAGTTTTACCAAGATGTGAAGGACTGGTGGCTCTTTGGGTTCTACTTCTGCATGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS GCA 72 bp | GCCCTTGTATTCGAAGGGTACCATGACGAAGCCGATTaGTTCCGGGATGGCCAAGATGAAGGAAAGAATCCA | + |
|
Preference number: 6 (lower is better) Translates to: ALVFEGYHDEAD*FRDGQDEGKNP Trigger: TGGATTCTTTCCTTCATCTTGGCCATCCCGGAAGCAATCGGCTTCGTCATGGTACCCTTCGAATACAAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS GCA 72 bp | CAGGGCGAAGATGACAACCAAGCAGAAGACAGTCTTTaGCACTTCTCGACGCTGTTTGAGGTGCTCACTAAG | + |
|
Preference number: 6 (lower is better) Translates to: QGEDDNQAEDSL*HFSTLFEVLTK Trigger: CTTAGTGAGCACCTCAAACAGCGTCGAGAAGTGGCAAAGACTGTCTTCTGCTTGGTTGTCATCTTCGCCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS GCA 72 bp | TCCTTGTGGCTGCTCCGTTCCGTGTTGTGGTTGTTCTaGTCTTGGTTCTTCCACTGGATACTCGTTCCATTC | + |
|
Preference number: 6 (lower is better) Translates to: SLWLLRSVLWLF*SWFFHWILVPF Trigger: GAATGGAACGAGTATCCAGTGGAAGAACCAAGAGCAGAACAACCACAACACGGAACGGAGCAGCCACAAGGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS CCA 72 bp | ATCTCTCCGGATTGTCAGCCATTACGCCTCCCACCATaGTCAGCCAAAAGTATGCCGCAAGGCAAAAGATAC | + |
|
Preference number: 6 (lower is better) Translates to: ISPDCQPLRLPP*SAKSMPQGKRY Trigger: GTATCTTTTGCCTTGCGGCATACTTTTGGCTGACCATGGTGGGAGGCGTAATGGCTGACAATCCGGAGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
||
| CDS CCA 72 bp | TCCGTGTTGTGGTTGTTCTGCTCTTGGTTCTTCCACTaGATACTCGTTCCATTCATGGGGACCGAGGTCATG | + |
|
Preference number: 6 (lower is better) Translates to: SVLWLFCSWFFH*ILVPFMGTEVM Trigger: CATGACCTCGGTCCCCATGAATGGAACGAGTATCCAGTGGAAGAACCAAGAGCAGAACAACCACAACACGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| CDS CAA 90 bp | TTCTGCAGGAAGGGGAACAGCTTGCAGAGAAACACTCCAAAATCATaGTGGTCGAAAGGCCAGCGTCCTGCCAAGAGCTTAAACACGTTG | + |
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Preference number: 6 (lower is better) Translates to: FCRKGNSLQRNTPKS*WSKGQRPAKSLNTL Trigger: CAACGTGTTTAAGCTCTTGGCAGGACGCTGGCCTTTCGACCACAATGATTTTGGAGTGTTTCTCTGCAAGCTGTTCCCCTTCCTGCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| CDS GCA 72 bp | CACTCCAAAATCATTGTGGTCGAAAGGCCAGCGTCCTaGCAAGAGCTTAAACACGTTGATGGGGAGGTCAAT | + |
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Preference number: 6 (lower is better) Translates to: HSKIIVVERPAS*QELKHVDGEVN Trigger: ATTGACCTCCCCATCAACGTGTTTAAGCTCTTGGCAGGACGCTGGCCTTTCGACCACAATGATTTTGGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| CDS CAA 72 bp | AAGGGGAACAGCTTGCAGAGAAACACTCCAAAATCATaGTGGTCGAAAGGCCAGCGTCCTGCCAAGAGCTTA | + |
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Preference number: 6 (lower is better) Translates to: KGNSLQRNTPKS*WSKGQRPAKSL Trigger: TAAGCTCTTGGCAGGACGCTGGCCTTTCGACCACAATGATTTTGGAGTGTTTCTCTGCAAGCTGTTCCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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| CDS CAA 72 bp | GAAGTAGAACCCAAAGAGCCACCAGTCCTTCACATCTaGGTAAAACTCCATGAACTTGGACGTGGCGTTGAG | + |
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Preference number: 6 (lower is better) Translates to: EVEPKEPPVLHI*VKLHELGRGVE Trigger: CTCAACGCCACGTCCAAGTTCATGGAGTTTTACCAAGATGTGAAGGACTGGTGGCTCTTTGGGTTCTACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034029.8 |
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