Pregenerated sensors for EDN3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027524Ensembl transcript IDs: ENSMUST00000029030.9, ENSMUST00000140908.2
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACGTGGTGCCCTTGGAACATGCCCAAAGACAGGTTCTCATTGCTATaGGGCCTGGTGGGGAGGTGGGCAGACTCTCCCAGCTGGGCCTGC | + |
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Preference number: 1 (lower is better) Translates to: TWCPWNMPKDRFSLL*GLVGRWADSPSWAC Trigger: GCAGGCCCAGCTGGGAGAGTCTGCCCACCTCCCCACCAGGCCTCATAGCAATGAGAACCTGTCTTTGGGCATGTTCCAAGGGCACCACGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR GCA 90 bp | TCTCCACGTGGTGCCCTTGGAACATGCCCAAAGACAGGTTCTCATTaGTATGAGGCCTGGTGGGGAGGTGGGCAGACTCTCCCAGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: SPRGALGTCPKTGSH*YEAWWGGGQTLPAG Trigger: CCCAGCTGGGAGAGTCTGCCCACCTCCCCACCAGGCCTCATAGCAATGAGAACCTGTCTTTGGGCATGTTCCAAGGGCACCACGTGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR TCA 90 bp | CCCAGCTGGGCCTGCAGAGTAGAGTTTACATGGGAACTCACAGTCTaGTCCCACCCCCACCCCCATACTCACCACGGACACAGAAGAAAG | + |
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Preference number: 1 (lower is better) Translates to: PSWACRVEFTWELTV*SHPHPHTHHGHRRK Trigger: CTTTCTTCTGTGTCCGTGGTGAGTATGGGGGTGGGGGTGGGATCAGACTGTGAGTTCCCATGTAAACTCTACTCTGCAGGCCCAGCTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR CCA 90 bp | GAAGGCCTGCTCCGGCCACATGGGTGTCCTGAATCTTCTAGGAGATaGATGTGTGTTTACTTTTGTAAAGAGCCAGCCTGGTGTCCACTT | + |
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Preference number: 1 (lower is better) Translates to: EGLLRPHGCPESSRR*MCVYFCKEPAWCPL Trigger: AAGTGGACACCAGGCTGGCTCTTTACAAAAGTAAACACACATCCATCTCCTAGAAGATTCAGGACACCCATGTGGCCGGAGCAGGCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR CCA 90 bp | ACCTCCTTCTTCTTTTCCAGACACTTTGATGTTTATCTTCTCAAATaGTCCCCAAACTCCTCTCCTCCCAATAGCTGCCCACCCGCCTTG | + |
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Preference number: 1 (lower is better) Translates to: TSFFFSRHFDVYLLK*SPNSSPPNSCPPAL Trigger: CAAGGCGGGTGGGCAGCTATTGGGAGGAGAGGAGTTTGGGGACCATTTGAGAAGATAAACATCAAAGTGTCTGGAAAAGAAGAAGGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR CCA 90 bp | TTTCATTTTTGCCTCAGGCCAATTCCCAACTTGTCGCTAAAGAGGTaGAAATTCAAACTCTGTATGCACAAGCTCCAAGGCTCTTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: FHFCLRPIPNLSLKR*KFKLCMHKLQGSFL Trigger: CAGGAAAGAGCCTTGGAGCTTGTGCATACAGAGTTTGAATTTCCACCTCTTTAGCGACAAGTTGGGAATTGGCCTGAGGCAAAAATGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR TCA 90 bp | AGTCACCAACTTCATCCAAACCTCCTTCTTCTTTTCCAGACACTTTaGTGTTTATCTTCTCAAATGGTCCCCAAACTCCTCTCCTCCCAA | + |
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Preference number: 1 (lower is better) Translates to: SHQLHPNLLLLFQTL*CLSSQMVPKLLSSQ Trigger: TTGGGAGGAGAGGAGTTTGGGGACCATTTGAGAAGATAAACATCAAAGTGTCTGGAAAAGAAGAAGGAGGTTTGGATGAAGTTGGTGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR TCA 90 bp | TTTGACTTATCTCCTGAGTGTTCTCACAGTGAGTGGATTTGTTTTTaGAATACAATCTGGCCACTGTGCCAAATAGTGCTTATGAGATTT | + |
|
Preference number: 1 (lower is better) Translates to: FDLSPECSHSEWICF*NTIWPLCQIVLMRF Trigger: AAATCTCATAAGCACTATTTGGCACAGTGGCCAGATTGTATTTCAAAAACAAATCCACTCACTGTGAGAACACTCAGGAGATAAGTCAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR CAA 90 bp | GCCCAGCTAGGATCCAGGTCTCAAGCACACAGATGCCTCGCTAACTaGCTCAGGCCACGCAGGCTGCAGAAGAAGGCCTGCTCCGGCCAC | + |
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Preference number: 2 (lower is better) Translates to: AQLGSRSQAHRCLAN*LRPRRLQKKACSGH Trigger: GTGGCCGGAGCAGGCCTTCTTCTGCAGCCTGCGTGGCCTGAGCAAGTTAGCGAGGCATCTGTGTGCTTGAGACCTGGATCCTAGCTGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR CAA 90 bp | CTTGAGCTGAAGCTGCCCCTCAGGGCAGCTTACTGCAAGGCAGGGTaGGGAGCTCTGCCACAGAGGCCATCGCAGAACCCCCAGCTCTTT | + |
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Preference number: 2 (lower is better) Translates to: LELKLPLRAAYCKAG*GALPQRPSQNPQLF Trigger: AAAGAGCTGGGGGTTCTGCGATGGCCTCTGTGGCAGAGCTCCCAACCCTGCCTTGCAGTAAGCTGCCCTGAGGGGCAGCTTCAGCTCAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR-3UTR TCA 90 bp | TACCATCTGGTTAAGGCTCCACTTCACACAATAGCTAAAGTGTCTCCACGTGGTTGGGAACTCACAGTCTaGTCCCACCCCCACCCCCAT | + |
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Preference number: 2 (lower is better) Translates to: YHLVKAPLHTIAKVSPRGWELTV*SHPHPH Trigger: ATGGGGGTGGGGGTGGGATCAGACTGTGAGTTCCCA...ACCACGTGGAGACACTTTAGCTATTGTGTGAAGTGGAGCCTTAACCAGATGGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR-3UTR CCA 90 bp | AGATGGATGTGTGTTTACTTTTGTAAAGAGCCAGCCTGGTGTCCACTTACTCTCTCTTTCCTGGAAGAGTaGGCAGGCAGGGAGAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: RWMCVYFCKEPAWCPLTLSFLEE*AGRESR Trigger: CCTGCTCTCCCTGCCTGCCCACTCTTCCAGGAAAGA...GAGAGTAAGTGGACACCAGGCTGGCTCTTTACAAAAGTAAACACACATCCATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR-3UTR CCA 90 bp | TCCACTTACTCTCCAAGAGGAGTCATGCCAAGGCCAGTAAGTAGCTTTCTGACTGAAACTGGGGTCTTTTaGACTTGGGCATTCTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: STYSPRGVMPRPVSSFLTETGVF*TWAFLG Trigger: CCCCAAGAATGCCCAAGTCCAAAAGACCCCAGTTTC...AGTCAGAAAGCTACTTACTGGCCTTGGCATGACTCCTCTTGGAGAGTAAGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR-3UTR TCA 90 bp | ATGTGTAACTGTGTGCAAGGAAAAGCCTGCAAGCCAGAGCAAACTTTTAGATTTAGGTTCTCATTGCTATaGGGCCTGGTGGGGAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: MCNCVQGKACKPEQTFRFRFSLL*GLVGRW Trigger: CCACCTCCCCACCAGGCCTCATAGCAATGAGAACCT...AAATCTAAAAGTTTGCTCTGGCTTGCAGGCTTTTCCTTGCACACAGTTACACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR-3UTR GCA 90 bp | TTCTTCTTTTCCAGACACTTTGATGTTTATCTTCTCAAATGGTCCCCAAACTCCGATGCCTCGCTAACTTaGTCAGGCCACGCAGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: FFFSRHFDVYLLKWSPNSDASLT*SGHAGC Trigger: GCAGCCTGCGTGGCCTGAGCAAGTTAGCGAGGCATC...GGAGTTTGGGGACCATTTGAGAAGATAAACATCAAAGTGTCTGGAAAAGAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR-3UTR CCA 90 bp | ATGTGTAACTGTGTGCAAGGAAAAGCCTGCAAGCCAGAGCAAACTTTTAGATTTTCCAAGGCTCTTTCCTaGAAGAGTGGGCAGGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: MCNCVQGKACKPEQTFRFSKALS*KSGQAG Trigger: CCCTGCCTGCCCACTCTTCCAGGAAAGAGCCTTGGA...AAATCTAAAAGTTTGCTCTGGCTTGCAGGCTTTTCCTTGCACACAGTTACACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR-3UTR TCA 90 bp | ATGCATTTGACTTATCTCCTGAGTGTTCTCACAGTGAGTGGATTTGTTTTTGAAGGCAGGGAGAGCAGGTaGAGTCCACTGCAGGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: MHLTYLLSVLTVSGFVFEGRESR*SPLQEA Trigger: TGCTTCCTGCAGTGGACTTCACCTGCTCTCCCTGCC...TTCAAAAACAAATCCACTCACTGTGAGAACACTCAGGAGATAAGTCAAATGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR-3UTR GCA 90 bp | AGATGGATGTGTGTTTACTTTTGTAAAGAGCCAGCCTGGTGTCCACTTACTCTCGCAGGTGAAGTCCACTaGAGGAAGCAAGAAGCATCA | + |
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Preference number: 2 (lower is better) Translates to: RWMCVYFCKEPAWCPLTLAGEVH*RKQEAS Trigger: TGATGCTTCTTGCTTCCTGCAGTGGACTTCACCTGC...GAGAGTAAGTGGACACCAGGCTGGCTCTTTACAAAAGTAAACACACATCCATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR CAA 90 bp | TGTACAGGTAAGCATGGGCTCTTTGGATGGGTCATTCTTTCATTTTaGCCTCAGGCCAATTCCCAACTTGTCGCTAAAGAGGTGGAAATT | + |
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Preference number: 2 (lower is better) Translates to: CTGKHGLFGWVILSF*PQANSQLVAKEVEI Trigger: AATTTCCACCTCTTTAGCGACAAGTTGGGAATTGGCCTGAGGCAAAAATGAAAGAATGACCCATCCAAAGAGCCCATGCTTACCTGTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR-3UTR TCA 90 bp | AAGAGCAGGCATTCCAAGGAAGTCACCAACTTCATCCAAACCTCCTTCTTCTTTCAAACAATTTCCTTGTaGAACTGGAGCCTCAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: KSRHSKEVTNFIQTSFFFQTISL*NWSLRH Trigger: ATGCCTGAGGCTCCAGTTTCACAAGGAAATTGTTTG...AAAGAAGAAGGAGGTTTGGATGAAGTTGGTGACTTCCTTGGAATGCCTGCTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR-3UTR GCA 90 bp | TCCACTTACTCTCCAAGAGGAGTCATGCCAAGGCCAGTAAGTAGCTTTCTGACTTCATTCTTTCATTTTTaGCTCAGGCCAATTCCCAAC | + |
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Preference number: 2 (lower is better) Translates to: STYSPRGVMPRPVSSFLTSFFHF*LRPIPN Trigger: GTTGGGAATTGGCCTGAGGCAAAAATGAAAGAATGA...AGTCAGAAAGCTACTTACTGGCCTTGGCATGACTCCTCTTGGAGAGTAAGTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR-3UTR CCA 90 bp | TTCTTCTTTTCCAGACACTTTGATGTTTATCTTCTCAAATGGTCCCCAAACTCCGCTGCCCACCCGCCTTaGTCTATACTTTCCTCTCTA | + |
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Preference number: 2 (lower is better) Translates to: FFFSRHFDVYLLKWSPNSAAHPP*SILSSL Trigger: TAGAGAGGAAAGTATAGACCAAGGCGGGTGGGCAGC...GGAGTTTGGGGACCATTTGAGAAGATAAACATCAAAGTGTCTGGAAAAGAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR CAA 90 bp | TTGGATGGGTCATTCTTTCATTTTTGCCTCAGGCCAATTCCCAACTaGTCGCTAAAGAGGTGGAAATTCAAACTCTGTATGCACAAGCTC | + |
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Preference number: 2 (lower is better) Translates to: LDGSFFHFCLRPIPN*SLKRWKFKLCMHKL Trigger: GAGCTTGTGCATACAGAGTTTGAATTTCCACCTCTTTAGCGACAAGTTGGGAATTGGCCTGAGGCAAAAATGAAAGAATGACCCATCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR-3UTR CCA 90 bp | TCCACTTACTCTCCAAGAGGAGTCATGCCAAGGCCAGTAAGTAGCTTTCTGACTTTGTCGCTAAAGAGGTaGAAATTCAAACTCTGTATG | + |
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Preference number: 2 (lower is better) Translates to: STYSPRGVMPRPVSSFLTLSLKR*KFKLCM Trigger: CATACAGAGTTTGAATTTCCACCTCTTTAGCGACAA...AGTCAGAAAGCTACTTACTGGCCTTGGCATGACTCCTCTTGGAGAGTAAGTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR-3UTR CCA 90 bp | ATGTGTAACTGTGTGCAAGGAAAAGCCTGCAAGCCAGAGCAAACTTTTAGATTTCATGGGCTCTTTGGATaGGTCATTCTTTCATTTTTG | + |
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Preference number: 2 (lower is better) Translates to: MCNCVQGKACKPEQTFRFHGLFG*VILSFL Trigger: CAAAAATGAAAGAATGACCCATCCAAAGAGCCCATG...AAATCTAAAAGTTTGCTCTGGCTTGCAGGCTTTTCCTTGCACACAGTTACACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR-3UTR TCA 90 bp | ATGTGTAACTGTGTGCAAGGAAAAGCCTGCAAGCCAGAGCAAACTTTTAGATTTATCCACATTTATTCATaGAAGCAGATATCCAGACCA | + |
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Preference number: 2 (lower is better) Translates to: MCNCVQGKACKPEQTFRFIHIYS*KQISRP Trigger: TGGTCTGGATATCTGCTTTCATGAATAAATGTGGAT...AAATCTAAAAGTTTGCTCTGGCTTGCAGGCTTTTCCTTGCACACAGTTACACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR-3UTR GCA 90 bp | ATGCATTTGACTTATCTCCTGAGTGTTCTCACAGTGAGTGGATTTGTTTTTGAAAATTCAAACTCTGTATaGACAAGCTCCAAGGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: MHLTYLLSVLTVSGFVFENSNSV*TSSKAL Trigger: AAGAGCCTTGGAGCTTGTGCATACAGAGTTTGAATT...TTCAAAAACAAATCCACTCACTGTGAGAACACTCAGGAGATAAGTCAAATGCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR GCA 72 bp | AGCCTTGAGCTGAAGCTGCCCCTCAGGGCAGCTTACTaGAAGGCAGGGTTGGGAGCTCTGCCACAGAGGCCA | + |
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Preference number: 3 (lower is better) Translates to: SLELKLPLRAAY*KAGLGALPQRP Trigger: TGGCCTCTGTGGCAGAGCTCCCAACCCTGCCTTGCAGTAAGCTGCCCTGAGGGGCAGCTTCAGCTCAAGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR CCA 72 bp | TGCCCAAAGACAGGTTCTCATTGCTATGAGGCCTGGTaGGGAGGTGGGCAGACTCTCCCAGCTGGGCCTGCA | + |
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Preference number: 3 (lower is better) Translates to: CPKTGSHCYEAW*GGGQTLPAGPA Trigger: TGCAGGCCCAGCTGGGAGAGTCTGCCCACCTCCCCACCAGGCCTCATAGCAATGAGAACCTGTCTTTGGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR GCA 72 bp | ACTGCCCAGCTAGGATCCAGGTCTCAAGCACACAGATaGCTCGCTAACTTGCTCAGGCCACGCAGGCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: TAQLGSRSQAHR*LANLLRPRRLQ Trigger: CTGCAGCCTGCGTGGCCTGAGCAAGTTAGCGAGGCATCTGTGTGCTTGAGACCTGGATCCTAGCTGGGCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR CCA 72 bp | ACATGCCCAAAGACAGGTTCTCATTGCTATGAGGCCTaGTGGGGAGGTGGGCAGACTCTCCCAGCTGGGCCT | + |
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Preference number: 3 (lower is better) Translates to: TCPKTGSHCYEA*WGGGQTLPAGP Trigger: AGGCCCAGCTGGGAGAGTCTGCCCACCTCCCCACCAGGCCTCATAGCAATGAGAACCTGTCTTTGGGCATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR TCA 72 bp | CCTTGGAACATGCCCAAAGACAGGTTCTCATTGCTATaGGGCCTGGTGGGGAGGTGGGCAGACTCTCCCAGC | + |
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Preference number: 3 (lower is better) Translates to: PWNMPKDRFSLL*GLVGRWADSPS Trigger: GCTGGGAGAGTCTGCCCACCTCCCCACCAGGCCTCATAGCAATGAGAACCTGTCTTTGGGCATGTTCCAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR GCA 72 bp | AACTTGCTCAGGCCACGCAGGCTGCAGAAGAAGGCCTaGTCCGGCCACATGGGTGTCCTGAATCTTCTAGGA | + |
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Preference number: 3 (lower is better) Translates to: NLLRPRRLQKKA*SGHMGVLNLLG Trigger: TCCTAGAAGATTCAGGACACCCATGTGGCCGGAGCAGGCCTTCTTCTGCAGCCTGCGTGGCCTGAGCAAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR GCA 72 bp | GATCCAGGTCTCAAGCACACAGATGCCTCGCTAACTTaGTCAGGCCACGCAGGCTGCAGAAGAAGGCCTGCT | + |
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Preference number: 3 (lower is better) Translates to: DPGLKHTDASLT*SGHAGCRRRPA Trigger: AGCAGGCCTTCTTCTGCAGCCTGCGTGGCCTGAGCAAGTTAGCGAGGCATCTGTGTGCTTGAGACCTGGATC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR GCA 72 bp | GGTGCCCTTGGAACATGCCCAAAGACAGGTTCTCATTaGTATGAGGCCTGGTGGGGAGGTGGGCAGACTCTC | + |
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Preference number: 3 (lower is better) Translates to: GALGTCPKTGSH*YEAWWGGGQTL Trigger: GAGAGTCTGCCCACCTCCCCACCAGGCCTCATAGCAATGAGAACCTGTCTTTGGGCATGTTCCAAGGGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR GCA 72 bp | CTCAAATGGTCCCCAAACTCCTCTCCTCCCAATAGCTaGCCACCCGCCTTGGTCTATACTTTCCTCTCTAGA | + |
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Preference number: 3 (lower is better) Translates to: LKWSPNSSPPNS*PPALVYTFLSR Trigger: TCTAGAGAGGAAAGTATAGACCAAGGCGGGTGGGCAGCTATTGGGAGGAGAGGAGTTTGGGGACCATTTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR TCA 72 bp | TGCCCACCCGCCTTGGTCTATACTTTCCTCTCTAGATaGATCCTACATCCAGAACTCTGGCTCTGTCCTGTC | + |
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Preference number: 3 (lower is better) Translates to: CPPALVYTFLSR*ILHPELWLCPV Trigger: GACAGGACAGAGCCAGAGTTCTGGATGTAGGATTCATCTAGAGAGGAAAGTATAGACCAAGGCGGGTGGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR CCA 72 bp | CTCCGGCCACATGGGTGTCCTGAATCTTCTAGGAGATaGATGTGTGTTTACTTTTGTAAAGAGCCAGCCTGG | + |
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Preference number: 3 (lower is better) Translates to: LRPHGCPESSRR*MCVYFCKEPAW Trigger: CCAGGCTGGCTCTTTACAAAAGTAAACACACATCCATCTCCTAGAAGATTCAGGACACCCATGTGGCCGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR CCA 72 bp | CAAACTCCTCTCCTCCCAATAGCTGCCCACCCGCCTTaGTCTATACTTTCCTCTCTAGATGAATCCTACATC | + |
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Preference number: 3 (lower is better) Translates to: QTPLLPIAAHPP*SILSSLDESYI Trigger: GATGTAGGATTCATCTAGAGAGGAAAGTATAGACCAAGGCGGGTGGGCAGCTATTGGGAGGAGAGGAGTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR-3UTR CAA 90 bp | ATGTGTAACTGTGTGCAAGGAAAAGCCTGCAAGCCAGAGCAAACTTTTAGATTTAGAACCCCCAGCTCTTaGCCGAGTGCCCCAGAGTTC | + |
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Preference number: 3 (lower is better) Translates to: MCNCVQGKACKPEQTFRFRTPSS*PSAPEF Trigger: GAACTCTGGGGCACTCGGCAAAGAGCTGGGGGTTCT...AAATCTAAAAGTTTGCTCTGGCTTGCAGGCTTTTCCTTGCACACAGTTACACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR-3UTR CAA 90 bp | ATGTGTAACTGTGTGCAAGGAAAAGCCTGCAAGCCAGAGCAAACTTTTAGATTTTACTGCAAGGCAGGGTaGGGAGCTCTGCCACAGAGG | + |
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Preference number: 3 (lower is better) Translates to: MCNCVQGKACKPEQTFRFYCKAG*GALPQR Trigger: CCTCTGTGGCAGAGCTCCCAACCCTGCCTTGCAGTA...AAATCTAAAAGTTTGCTCTGGCTTGCAGGCTTTTCCTTGCACACAGTTACACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR CCA 72 bp | TGCCTCAGGCCAATTCCCAACTTGTCGCTAAAGAGGTaGAAATTCAAACTCTGTATGCACAAGCTCCAAGGC | + |
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Preference number: 3 (lower is better) Translates to: CLRPIPNLSLKR*KFKLCMHKLQG Trigger: GCCTTGGAGCTTGTGCATACAGAGTTTGAATTTCCACCTCTTTAGCGACAAGTTGGGAATTGGCCTGAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR GCA 72 bp | CTCCAGAGGCCTGTGAAGAGTGAATGTGTAACTGTGTaGAAGGAAAAGCCTGCAAGCCAGAGCAAACTTTTA | + |
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Preference number: 3 (lower is better) Translates to: LQRPVKSECVTV*KEKPASQSKLL Trigger: TAAAAGTTTGCTCTGGCTTGCAGGCTTTTCCTTGCACACAGTTACACATTCACTCTTCACAGGCCTCTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR-3UTR CAA 90 bp | TCCACTTACTCTCCAAGAGGAGTCATGCCAAGGCCAGTAAGTAGCTTTCTGACTGTCATTCTTTCATTTTaGCCTCAGGCCAATTCCCAA | + |
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Preference number: 3 (lower is better) Translates to: STYSPRGVMPRPVSSFLTVILSF*PQANSQ Trigger: TTGGGAATTGGCCTGAGGCAAAAATGAAAGAATGAC...AGTCAGAAAGCTACTTACTGGCCTTGGCATGACTCCTCTTGGAGAGTAAGTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR CCA 72 bp | AGATGGATGTGTGTTTACTTTTGTAAAGAGCCAGCCTaGTGTCCACTTACTCTCCAAGAGGAGTCATGCCAA | + |
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Preference number: 3 (lower is better) Translates to: RWMCVYFCKEPA*CPLTLQEESCQ Trigger: TTGGCATGACTCCTCTTGGAGAGTAAGTGGACACCAGGCTGGCTCTTTACAAAAGTAAACACACATCCATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR-3UTR CAA 90 bp | TTCTTCTTTTCCAGACACTTTGATGTTTATCTTCTCAAATGGTCCCCAAACTCCGGAAACTGGGGTCTTTaGGACTTGGGCATTCTTGGG | + |
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Preference number: 3 (lower is better) Translates to: FFFSRHFDVYLLKWSPNSGNWGL*DLGILG Trigger: CCCAAGAATGCCCAAGTCCAAAAGACCCCAGTTTCC...GGAGTTTGGGGACCATTTGAGAAGATAAACATCAAAGTGTCTGGAAAAGAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR TCA 72 bp | CCATTTGCTTTTATGTCCTGTGTGGCCTTGCTACTGTaGTCACTTCTGGAGATAATTCTCAGATGCTTTGAG | + |
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Preference number: 3 (lower is better) Translates to: PFAFMSCVALLL*SLLEIILRCFE Trigger: CTCAAAGCATCTGAGAATTATCTCCAGAAGTGATCACAGTAGCAAGGCCACACAGGACATAAAAGCAAATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| 3UTR TCA 72 bp | TCTCCTGAGTGTTCTCACAGTGAGTGGATTTGTTTTTaGAATACAATCTGGCCACTGTGCCAAATAGTGCTT | + |
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Preference number: 3 (lower is better) Translates to: SPECSHSEWICF*NTIWPLCQIVL Trigger: AAGCACTATTTGGCACAGTGGCCAGATTGTATTTCAAAAACAAATCCACTCACTGTGAGAACACTCAGGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
||
| 3UTR GCA 72 bp | TTTCTAAGTCCTATGAAATTCAATTTCATAGACTACTaGCCAGCTAGGATCCAGGTCTCAAGCACACAGATG | + |
|
Preference number: 3 (lower is better) Translates to: FLSPMKFNFIDY*PARIQVSSTQM Trigger: CATCTGTGTGCTTGAGACCTGGATCCTAGCTGGGCAGTAGTCTATGAAATTGAATTTCATAGGACTTAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
||
| CDS-3UTR CCA 90 bp | ACTGCAAGGCAGGGTTGGGAGCTCTGCCACAGAGGCCATCGCAGAACCCCCAGCGCTTCAGGGGGACCCTaGGACACACTGGCTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TARQGWELCHRGHRRTPSASGGP*DTLALP Trigger: TGGCAGAGCCAGTGTGTCCCAGGGTCCCCCTGAAGC...GCTGGGGGTTCTGCGATGGCCTCTGTGGCAGAGCTCCCAACCCTGCCTTGCAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
||
| CDS-3UTR CCA 90 bp | ACTGCAAGGCAGGGTTGGGAGCTCTGCCACAGAGGCCATCGCAGAACCCCCAGCTTTCCCAGACCTGCCTaGTGCCCGTTCCTGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TARQGWELCHRGHRRTPSFPRPA*CPFLPS Trigger: GCTGGGCAGGAACGGGCACCAGGCAGGTCTGGGAAA...GCTGGGGGTTCTGCGATGGCCTCTGTGGCAGAGCTCCCAACCCTGCCTTGCAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
||
| 3UTR CAA 72 bp | AAGCTGCCCCTCAGGGCAGCTTACTGCAAGGCAGGGTaGGGAGCTCTGCCACAGAGGCCATCGCAGAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: KLPLRAAYCKAG*GALPQRPSQNP Trigger: GGGGTTCTGCGATGGCCTCTGTGGCAGAGCTCCCAACCCTGCCTTGCAGTAAGCTGCCCTGAGGGGCAGCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
||
| CDS-3UTR TCA 90 bp | ACTGCAAGGCAGGGTTGGGAGCTCTGCCACAGAGGCCATCGCAGAACCCCCAGCCCTTGTCCTTGTAAGTaGAGCACGTGCAGCGGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: TARQGWELCHRGHRRTPSPCPCK*STCSGE Trigger: CTCGCCGCTGCACGTGCTTCACTTACAAGGACAAGG...GCTGGGGGTTCTGCGATGGCCTCTGTGGCAGAGCTCCCAACCCTGCCTTGCAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
||
| CDS-3UTR CCA 90 bp | GAGCTGAAGCTGCCCCTCAGGGCAGCTTACTGCAAGGCAGGGTTGGGAGCTCTGGGAGCTTTCTGGAACTaGCCCCAAGGACCTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ELKLPLRAAYCKAGLGALGAFWN*PQGPLS Trigger: GGAAAGAGGTCCTTGGGGCCAGTTCCAGAAAGCTCC...CAGAGCTCCCAACCCTGCCTTGCAGTAAGCTGCCCTGAGGGGCAGCTTCAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
||
| 3UTR CAA 72 bp | GGATCCAGGTCTCAAGCACACAGATGCCTCGCTAACTaGCTCAGGCCACGCAGGCTGCAGAAGAAGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GSRSQAHRCLAN*LRPRRLQKKAC Trigger: GCAGGCCTTCTTCTGCAGCCTGCGTGGCCTGAGCAAGTTAGCGAGGCATCTGTGTGCTTGAGACCTGGATCC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
||
| CDS-3UTR TCA 90 bp | TCCACTTACTCTCCAAGAGGAGTCATGCCAAGGCCAGTAAGTAGCTTTCTGACTCAGCGGAGGTCACTGTaGGCCCGAGAAGGAGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: STYSPRGVMPRPVSSFLTQRRSL*AREGAT Trigger: TGTGGCTCCTTCTCGGGCTCACAGTGACCTCCGCTG...AGTCAGAAAGCTACTTACTGGCCTTGGCATGACTCCTCTTGGAGAGTAAGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
||
| CDS-3UTR GCA 90 bp | AAGAGCAGGCATTCCAAGGAAGTCACCAACTTCATCCAAACCTCCTTCTTCTTTGCGAGGGCGGTGGTGTaGAGGCAGCCCCTTGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KSRHSKEVTNFIQTSFFFARAVV*RQPLVL Trigger: GAGGACAAGGGGCTGCCTGCACACCACCGCCCTCGC...AAAGAAGAAGGAGGTTTGGATGAAGTTGGTGACTTCCTTGGAATGCCTGCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
||
| CDS-3UTR TCA 90 bp | TCCACTTACTCTCCAAGAGGAGTCATGCCAAGGCCAGTAAGTAGCTTTCTGACTTTCACAGCCCCTCTCTaGTCCAGCTTCAGGGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: STYSPRGVMPRPVSSFLTFTAPL*SSFRGT Trigger: GGTCCCCCTGAAGCTGGATCAGAGAGGGGCTGTGAA...AGTCAGAAAGCTACTTACTGGCCTTGGCATGACTCCTCTTGGAGAGTAAGTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
||
| CDS-3UTR GCA 90 bp | CTGAATCTTCTAGGAGATGGATGTGTGTTTACTTTTGTAAAGAGCCAGCCTGGTCCCAGACCTGCCTGGTaGCCGTTCCTGCCCAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LNLLGDGCVFTFVKSQPGPRPAW*PFLPSA Trigger: AGCGCTGGGCAGGAACGGGCACCAGGCAGGTCTGGG...ACCAGGCTGGCTCTTTACAAAAGTAAACACACATCCATCTCCTAGAAGATTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
||
| CDS-3UTR CCA 90 bp | TACCATCTGGTTAAGGCTCCACTTCACACAATAGCTAAAGTGTCTCCACGTGGTGACCCTGGGACACACTaGCTCTGCCAGAGTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YHLVKAPLHTIAKVSPRGDPGTH*LCQSPQ Trigger: CTGGGGACTCTGGCAGAGCCAGTGTGTCCCAGGGTC...ACCACGTGGAGACACTTTAGCTATTGTGTGAAGTGGAGCCTTAACCAGATGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
||
| CDS-3UTR GCA 90 bp | TTGGATGGGTCATTCTTTCATTTTTGCCTCAGGCCAATTCCCAACTTGTCGCTAGGGACACACTGGCTCTaGCAGAGTCCCCAGACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LDGSFFHFCLRPIPNLSLGTHWL*QSPQTG Trigger: CCCAGTCTGGGGACTCTGGCAGAGCCAGTGTGTCCC...TAGCGACAAGTTGGGAATTGGCCTGAGGCAAAAATGAAAGAATGACCCATCCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
||
| CDS-3UTR CCA 90 bp | AAGAGCAGGCATTCCAAGGAAGTCACCAACTTCATCCAAACCTCCTTCTTCTTTAGGCTGGGAGCTTTCTaGAACTGGCCCCAAGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: KSRHSKEVTNFIQTSFFFRLGAF*NWPQGP Trigger: AGGTCCTTGGGGCCAGTTCCAGAAAGCTCCCAGCCT...AAAGAAGAAGGAGGTTTGGATGAAGTTGGTGACTTCCTTGGAATGCCTGCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
||
| CDS-3UTR GCA 90 bp | ATGTGTAACTGTGTGCAAGGAAAAGCCTGCAAGCCAGAGCAAACTTTTAGATTTCTTGTTTCCCAGACCTaGCTGGTGCCCGTTCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: MCNCVQGKACKPEQTFRFLVSQT*LVPVPA Trigger: GGCAGGAACGGGCACCAGGCAGGTCTGGGAAACAAG...AAATCTAAAAGTTTGCTCTGGCTTGCAGGCTTTTCCTTGCACACAGTTACACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
||
| 3UTR CAA 72 bp | TCTTGGGGTAAGGGTGTACAGGTAAGCATGGGCTCTTaGGATGGGTCATTCTTTCATTTTTGCCTCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SWGKGVQVSMGS*DGSFFHFCLRP Trigger: TGGCCTGAGGCAAAAATGAAAGAATGACCCATCCAAAGAGCCCATGCTTACCTGTACACCCTTACCCCAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
||
| 3UTR CAA 72 bp | TTGAGCAATAGGCCCATGGTTGTCTCCCTGAAAAGGTaGTGTAGAAGAGCAGGCATTCCAAGGAAGTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LSNRPMVVSLKR*CRRAGIPRKSP Trigger: TGGTGACTTCCTTGGAATGCCTGCTCTTCTACACAACCTTTTCAGGGAGACAACCATGGGCCTATTGCTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
||
| CDS-3UTR GCA 90 bp | CTGAATCTTCTAGGAGATGGATGTGTGTTTACTTTTGTAAAGAGCCAGCCTGGTCTCCCGCATCTCTTCTaGAGCTGGCCTTTCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LNLLGDGCVFTFVKSQPGLPHLF*SWPFCS Trigger: AGAGCAGAAAGGCCAGCTGCAGAAGAGATGCGGGAG...ACCAGGCTGGCTCTTTACAAAAGTAAACACACATCCATCTCCTAGAAGATTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
||
| CDS-3UTR CCA 90 bp | AGATGGATGTGTGTTTACTTTTGTAAAGAGCCAGCCTGGTGTCCACTTACTCTCGGCTTTCTCTGTAGTTaGACAGTCCATAGGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RWMCVYFCKEPAWCPLTLGFLCS*TVHRAQ Trigger: CTGTGCCCTATGGACTGTCCAACTACAGAGAAAGCC...GAGAGTAAGTGGACACCAGGCTGGCTCTTTACAAAAGTAAACACACATCCATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
||
| 3UTR CAA 72 bp | CCCTCTCCCTCTTTTATCAAACAGCCTCCCTTCCATTaGCTTTTATGTCCTGTGTGGCCTTGCTACTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PSPSFIKQPPFH*LLCPVWPCYCD Trigger: ATCACAGTAGCAAGGCCACACAGGACATAAAAGCAAATGGAAGGGAGGCTGTTTGATAAAAGAGGGAGAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
||
| CDS-3UTR GCA 90 bp | ATGTGTAACTGTGTGCAAGGAAAAGCCTGCAAGCCAGAGCAAACTTTTAGATTTAGGCTGTGCAGGCAGTaGAACTGTTGGGGACACAAT | + |
|
Preference number: 4 (lower is better) Translates to: MCNCVQGKACKPEQTFRFRLCRQ*NCWGHN Trigger: ATTGTGTCCCCAACAGTTGCACTGCCTGCACAGCCT...AAATCTAAAAGTTTGCTCTGGCTTGCAGGCTTTTCCTTGCACACAGTTACACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
||
| 3UTR CAA 72 bp | AAGCATGGGCTCTTTGGATGGGTCATTCTTTCATTTTaGCCTCAGGCCAATTCCCAACTTGTCGCTAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KHGLFGWVILSF*PQANSQLVAKE Trigger: CTCTTTAGCGACAAGTTGGGAATTGGCCTGAGGCAAAAATGAAAGAATGACCCATCCAAAGAGCCCATGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
||
| 3UTR CAA 72 bp | TCATTCTTTCATTTTTGCCTCAGGCCAATTCCCAACTaGTCGCTAAAGAGGTGGAAATTCAAACTCTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: SFFHFCLRPIPN*SLKRWKFKLCM Trigger: CATACAGAGTTTGAATTTCCACCTCTTTAGCGACAAGTTGGGAATTGGCCTGAGGCAAAAATGAAAGAATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
||
| 3UTR CAA 72 bp | CATAATGTACAAAGAGTTTGTGTTTTTGGGCTTATTTaGAAGCCACTCCCCAAGGATCCACATTTATTCATG | + |
|
Preference number: 4 (lower is better) Translates to: HNVQRVCVFGLI*KPLPKDPHLFM Trigger: CATGAATAAATGTGGATCCTTGGGGAGTGGCTTCAAAATAAGCCCAAAAACACAAACTCTTTGTACATTATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
||
| CDS GCA 90 bp | TGCCCGTTCCTGCCCAGCGCTTTCAGGCTGTGCAGGCAGTGCAACTaGAGCGGAGGTCACTGTGAGCCCGAGAAGGAGCCACAGCCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: CPFLPSAFRLCRQCN*SGGHCEPEKEPQPR Trigger: CCGGGGCTGTGGCTCCTTCTCGGGCTCACAGTGACCTCCGCTGCAGTTGCACTGCCTGCACAGCCTGAAAGCGCTGGGCAGGAACGGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140908.2 |
||
| CDS GCA 90 bp | GCCTGGTGCCCGTTCCTGCCCAGCGCTTTCAGGCTGTGCAGGCAGTaGAACTGCAGCGGAGGTCACTGTGAGCCCGAGAAGGAGCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: AWCPFLPSAFRLCRQ*NCSGGHCEPEKEPQ Trigger: CTGTGGCTCCTTCTCGGGCTCACAGTGACCTCCGCTGCAGTTGCACTGCCTGCACAGCCTGAAAGCGCTGGGCAGGAACGGGCACCAGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140908.2 |
||
| CDS GCA 90 bp | CCCAGACCTGCCTGGTGCCCGTTCCTGCCCAGCGCTTTCAGGCTGTaGAGGCAGTGCAACTGCAGCGGAGGTCACTGTGAGCCCGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PRPAWCPFLPSAFRL*RQCNCSGGHCEPEK Trigger: CTTCTCGGGCTCACAGTGACCTCCGCTGCAGTTGCACTGCCTGCACAGCCTGAAAGCGCTGGGCAGGAACGGGCACCAGGCAGGTCTGGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140908.2 |
||
| CDS CCA 90 bp | GTGGTGTGCAGGCAGCCCCTTGTCCTCTTGTTTCCCAGACCTGCCTaGTGCCCGTTCCTGCCCAGCGCTTTCAGGCTGTGCAGGCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VVCRQPLVLLFPRPA*CPFLPSAFRLCRQC Trigger: GCACTGCCTGCACAGCCTGAAAGCGCTGGGCAGGAACGGGCACCAGGCAGGTCTGGGAAACAAGAGGACAAGGGGCTGCCTGCACACCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029030.9 ENSMUST00000140908.2 |
||
| CDS GCA 90 bp | AGCCCCTTGTCCTCTTGTTTCCCAGACCTGCCTGGTGCCCGTTCCTaGCCAGCGCTTTCAGGCTGTGCAGGCAGTGCAACTGCAGCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SPLSSCFPDLPGARS*PALSGCAGSATAAE Trigger: CTCCGCTGCAGTTGCACTGCCTGCACAGCCTGAAAGCGCTGGGCAGGAACGGGCACCAGGCAGGTCTGGGAAACAAGAGGACAAGGGGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140908.2 |
||
| CDS GCA 90 bp | AGCCCCTTGTCCTCTTGTTTCCCAGACCTGCCTGGTGCCCGTTCCTaGCCAGCGCTTTCAGGCTGTGCAGGCAGTGCAACTGTTGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SPLSSCFPDLPGARS*PALSGCAGSATVGD Trigger: GTCCCCAACAGTTGCACTGCCTGCACAGCCTGAAAGCGCTGGGCAGGAACGGGCACCAGGCAGGTCTGGGAAACAAGAGGACAAGGGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
||
| CDS-3UTR CAA 90 bp | GAGCTGAAGCTGCCCCTCAGGGCAGCTTACTGCAAGGCAGGGTTGGGAGCTCTGTGTGCAGGCAGCCCCTaGTCCTCTTGTTTCCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: ELKLPLRAAYCKAGLGALCAGSP*SSCFPD Trigger: GTCTGGGAAACAAGAGGACAAGGGGCTGCCTGCACA...CAGAGCTCCCAACCCTGCCTTGCAGTAAGCTGCCCTGAGGGGCAGCTTCAGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
||
| CDS GCA 90 bp | ACGTGGGCCTCCAGTCTCCCGCATCTCTTCTGCAGCTGGCCTTTCTaGTCTGGTGACATCTCTGGTGCGTGCACAGAAGTGTGCACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TWASSLPHLFCSWPF*SGDISGACTEVCTG Trigger: GCCTGTGCACACTTCTGTGCACGCACCAGAGATGTCACCAGAGCAGAAAGGCCAGCTGCAGAAGAGATGCGGGAGACTGGAGGCCCACGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140908.2 |
||
| CDS GCA 90 bp | ACGTGGGCCTCCAGTCTCCCGCATCTCTTCTGCAGCTGGCCTTTCTaGTCTCCCGGAATAACTGGTGACATCTCTGGTGCGTGCACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: TWASSLPHLFCSWPF*SPGITGDISGACTE Trigger: TTCTGTGCACGCACCAGAGATGTCACCAGTTATTCCGGGAGAGCAGAAAGGCCAGCTGCAGAAGAGATGCGGGAGACTGGAGGCCCACGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
||
| CDS CCA 90 bp | CAACCTTTGACGTGGGCCTCCAGTCTCCCGCATCTCTTCTGCAGCTaGCCTTTCTGCTCTGGTGACATCTCTGGTGCGTGCACAGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: QPLTWASSLPHLFCS*PFCSGDISGACTEV Trigger: CACTTCTGTGCACGCACCAGAGATGTCACCAGAGCAGAAAGGCCAGCTGCAGAAGAGATGCGGGAGACTGGAGGCCCACGTCAAAGGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140908.2 |
||
| CDS TCA 90 bp | CTCCAGTCTCCCGCATCTCTTCTGCAGCTGGCCTTTCTGCTCTGGTaGCATCTCTGGTGCGTGCACAGAAGTGTGCACAGGCCTTGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LQSPASLLQLAFLLW*HLWCVHRSVHRPCH Trigger: ATGACAAGGCCTGTGCACACTTCTGTGCACGCACCAGAGATGTCACCAGAGCAGAAAGGCCAGCTGCAGAAGAGATGCGGGAGACTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140908.2 |
||
| CDS GCA 90 bp | TGGCCTTTCTGCTCTGGTGACATCTCTGGTGCGTGCACAGAAGTGTaGACAGGCCTTGTCATCCGCCCCCATACAAGTACAACGCAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: WPFCSGDISGACTEV*TGLVIRPHTSTTQA Trigger: CGCTTGCGTTGTACTTGTATGGGGGCGGATGACAAGGCCTGTGCACACTTCTGTGCACGCACCAGAGATGTCACCAGAGCAGAAAGGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140908.2 |
||
| CDS CCA 90 bp | ACAACGCAAGCGTGTCCACGGAGAAGGCTGGGAGCTTTCTGGAACTaGCCCCAAGGACCTCTTTCCCCGAAGGCTTTCTCTGTAGTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: TTQACPRRRLGAFWN*PQGPLSPKAFSVVG Trigger: TCCAACTACAGAGAAAGCCTTCGGGGAAAGAGGTCCTTGGGGCCAGTTCCAGAAAGCTCCCAGCCTTCTCCGTGGACACGCTTGCGTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029030.9 ENSMUST00000140908.2 |
||
| CDS GCA 90 bp | TCTCCCGGAATAACTGGTGACATCTCTGGTGCGTGCACAGAAGTGTaGACAGGCCTTGTCATCCGCCCCCATACAAGTACAACGCAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: SPGITGDISGACTEV*TGLVIRPHTSTTQA Trigger: CGCTTGCGTTGTACTTGTATGGGGGCGGATGACAAGGCCTGTGCACACTTCTGTGCACGCACCAGAGATGTCACCAGTTATTCCGGGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
||
| CDS-3UTR CAA 90 bp | CTGAATCTTCTAGGAGATGGATGTGTGTTTACTTTTGTAAAGAGCCAGCCTGGTCAGCCCCTTGTCCTCTaGTTTCCCAGACCTGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LNLLGDGCVFTFVKSQPGQPLVL*FPRPAW Trigger: CCAGGCAGGTCTGGGAAACAAGAGGACAAGGGGCTG...ACCAGGCTGGCTCTTTACAAAAGTAAACACACATCCATCTCCTAGAAGATTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
||
| CDS-3UTR CAA 90 bp | TTGGATGGGTCATTCTTTCATTTTTGCCTCAGGCCAATTCCCAACTTGTCGCTACAGGCAGTGCAACTGTaGGGGACACAATCCTCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LDGSFFHFCLRPIPNLSLQAVQL*GTQSSH Trigger: GTGAGAGGATTGTGTCCCCAACAGTTGCACTGCCTG...TAGCGACAAGTTGGGAATTGGCCTGAGGCAAAAATGAAAGAATGACCCATCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
||
| CDS CAA 72 bp | GCGAGGGCGGTGGTGTGCAGGCAGCCCCTTGTCCTCTaGTTTCCCAGACCTGCCTGGTGCCCGTTCCTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: ARAVVCRQPLVL*FPRPAWCPFLP Trigger: GGGCAGGAACGGGCACCAGGCAGGTCTGGGAAACAAGAGGACAAGGGGCTGCCTGCACACCACCGCCCTCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029030.9 ENSMUST00000140908.2 |
||
| CDS CAA 72 bp | GTGCAGCGGCGAGGGCGGTGGTGTGCAGGCAGCCCCTaGTCCTCTTGTTTCCCAGACCTGCCTGGTGCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: VQRRGRWCAGSP*SSCFPDLPGAR Trigger: ACGGGCACCAGGCAGGTCTGGGAAACAAGAGGACAAGGGGCTGCCTGCACACCACCGCCCTCGCCGCTGCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029030.9 ENSMUST00000140908.2 |
||
| CDS CAA 90 bp | GTGAAGCACGTGCAGCGGCGAGGGCGGTGGTGTGCAGGCAGCCCCTaGTCCTCTTGTTTCCCAGACCTGCCTGGTGCCCGTTCCTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: VKHVQRRGRWCAGSP*SSCFPDLPGARSCP Trigger: TGGGCAGGAACGGGCACCAGGCAGGTCTGGGAAACAAGAGGACAAGGGGCTGCCTGCACACCACCGCCCTCGCCGCTGCACGTGCTTCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029030.9 ENSMUST00000140908.2 |
||
| CDS GCA 72 bp | GCCTGGTGCCCGTTCCTGCCCAGCGCTTTCAGGCTGTaGAGGCAGTGCAACTGCAGCGGAGGTCACTGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: AWCPFLPSAFRL*RQCNCSGGHCE Trigger: CTCACAGTGACCTCCGCTGCAGTTGCACTGCCTGCACAGCCTGAAAGCGCTGGGCAGGAACGGGCACCAGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140908.2 |
||
| CDS GCA 72 bp | CAGCCCCTTGTCCTCTTGTTTCCCAGACCTGCCTGGTaGCCGTTCCTGCCCAGCGCTTTCAGGCTGTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: QPLVLLFPRPAW*PFLPSAFRLCR Trigger: CCTGCACAGCCTGAAAGCGCTGGGCAGGAACGGGCACCAGGCAGGTCTGGGAAACAAGAGGACAAGGGGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029030.9 ENSMUST00000140908.2 |
||
| CDS GCA 72 bp | GTGCAGGCAGCCCCTTGTCCTCTTGTTTCCCAGACCTaGCTGGTGCCCGTTCCTGCCCAGCGCTTTCAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: VQAAPCPLVSQT*LVPVPAQRFQA Trigger: AGCCTGAAAGCGCTGGGCAGGAACGGGCACCAGGCAGGTCTGGGAAACAAGAGGACAAGGGGCTGCCTGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029030.9 ENSMUST00000140908.2 |
||
| CDS GCA 72 bp | CTGCCCAGCGCTTTCAGGCTGTGCAGGCAGTGCAACTaGAGCGGAGGTCACTGTGAGCCCGAGAAGGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LPSAFRLCRQCN*SGGHCEPEKEP Trigger: TGGCTCCTTCTCGGGCTCACAGTGACCTCCGCTGCAGTTGCACTGCCTGCACAGCCTGAAAGCGCTGGGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140908.2 |
||
| CDS GCA 72 bp | CCGTTCCTGCCCAGCGCTTTCAGGCTGTGCAGGCAGTaGAACTGCAGCGGAGGTCACTGTGAGCCCGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PFLPSAFRLCRQ*NCSGGHCEPEK Trigger: CTTCTCGGGCTCACAGTGACCTCCGCTGCAGTTGCACTGCCTGCACAGCCTGAAAGCGCTGGGCAGGAACGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140908.2 |
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| CDS CCA 72 bp | AGGCAGCCCCTTGTCCTCTTGTTTCCCAGACCTGCCTaGTGCCCGTTCCTGCCCAGCGCTTTCAGGCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: RQPLVLLFPRPA*CPFLPSAFRLC Trigger: GCACAGCCTGAAAGCGCTGGGCAGGAACGGGCACCAGGCAGGTCTGGGAAACAAGAGGACAAGGGGCTGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029030.9 ENSMUST00000140908.2 |
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| CDS GCA 72 bp | CCGTTCCTGCCCAGCGCTTTCAGGCTGTGCAGGCAGTaGAACTGTTGGGGACACAATCCTCTCACCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: PFLPSAFRLCRQ*NCWGHNPLTRA Trigger: GGCCCTGGTGAGAGGATTGTGTCCCCAACAGTTGCACTGCCTGCACAGCCTGAAAGCGCTGGGCAGGAACGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| CDS CAA 72 bp | GCCCAGCGCTTTCAGGCTGTGCAGGCAGTGCAACTGTaGGGGACACAATCCTCTCACCAGGGCCAGCCACAG | + |
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Preference number: 6 (lower is better) Translates to: AQRFQAVQAVQL*GTQSSHQGQPQ Trigger: CTGTGGCTGGCCCTGGTGAGAGGATTGTGTCCCCAACAGTTGCACTGCCTGCACAGCCTGAAAGCGCTGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| CDS GCA 72 bp | TCCTCTTGTTTCCCAGACCTGCCTGGTGCCCGTTCCTaGCCAGCGCTTTCAGGCTGTGCAGGCAGTGCAACT | + |
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Preference number: 6 (lower is better) Translates to: SSCFPDLPGARS*PALSGCAGSAT Trigger: AGTTGCACTGCCTGCACAGCCTGAAAGCGCTGGGCAGGAACGGGCACCAGGCAGGTCTGGGAAACAAGAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029030.9 ENSMUST00000140908.2 |
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| CDS CCA 72 bp | ACGCAAGCGTGTCCACGGAGAAGGCTGGGAGCTTTCTaGAACTGGCCCCAAGGACCTCTTTCCCCGAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: TQACPRRRLGAF*NWPQGPLSPKA Trigger: AGCCTTCGGGGAAAGAGGTCCTTGGGGCCAGTTCCAGAAAGCTCCCAGCCTTCTCCGTGGACACGCTTGCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029030.9 ENSMUST00000140908.2 |
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| CDS CCA 72 bp | ACGTGGGCCTCCAGTCTCCCGCATCTCTTCTGCAGCTaGCCTTTCTGCTCTGGTGACATCTCTGGTGCGTGC | + |
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Preference number: 6 (lower is better) Translates to: TWASSLPHLFCS*PFCSGDISGAC Trigger: GCACGCACCAGAGATGTCACCAGAGCAGAAAGGCCAGCTGCAGAAGAGATGCGGGAGACTGGAGGCCCACGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140908.2 |
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| CDS TCA 72 bp | GGTGGCAATAGTAGACACACTCCTTGTCCTTGTAAGTaGAGCACGTGCAGCGGCGAGGGCGGTGGTGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: GGNSRHTPCPCK*STCSGEGGGVQ Trigger: CTGCACACCACCGCCCTCGCCGCTGCACGTGCTTCACTTACAAGGACAAGGAGTGTGTCTACTATTGCCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029030.9 ENSMUST00000140908.2 |
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| CDS TCA 72 bp | CCCGCATCTCTTCTGCAGCTGGCCTTTCTGCTCTGGTaGCATCTCTGGTGCGTGCACAGAAGTGTGCACAGG | + |
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Preference number: 6 (lower is better) Translates to: PASLLQLAFLLW*HLWCVHRSVHR Trigger: CCTGTGCACACTTCTGTGCACGCACCAGAGATGTCACCAGAGCAGAAAGGCCAGCTGCAGAAGAGATGCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140908.2 |
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| CDS GCA 72 bp | CCTTTGACGTGGGCCTCCAGTCTCCCGCATCTCTTCTaGAGCTGGCCTTTCTGCTCTCCCGGAATAACTGGT | + |
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Preference number: 6 (lower is better) Translates to: PLTWASSLPHLF*SWPFCSPGITG Trigger: ACCAGTTATTCCGGGAGAGCAGAAAGGCCAGCTGCAGAAGAGATGCGGGAGACTGGAGGCCCACGTCAAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| CDS CCA 72 bp | ACGTGGGCCTCCAGTCTCCCGCATCTCTTCTGCAGCTaGCCTTTCTGCTCTCCCGGAATAACTGGTGACATC | + |
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Preference number: 6 (lower is better) Translates to: TWASSLPHLFCS*PFCSPGITGDI Trigger: GATGTCACCAGTTATTCCGGGAGAGCAGAAAGGCCAGCTGCAGAAGAGATGCGGGAGACTGGAGGCCCACGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| CDS TCA 72 bp | CTGCAGCTGGCCTTTCTGCTCTCCCGGAATAACTGGTaGCATCTCTGGTGCGTGCACAGAAGTGTGCACAGG | + |
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Preference number: 6 (lower is better) Translates to: LQLAFLLSRNNW*HLWCVHRSVHR Trigger: CCTGTGCACACTTCTGTGCACGCACCAGAGATGTCACCAGTTATTCCGGGAGAGCAGAAAGGCCAGCTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| CDS TCA 72 bp | GGCCGGTGGGCTTTATCTGTCCTTGACATCAACCTTTaGCGTGGGCCTCCAGTCTCCCGCATCTCTTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: GRWALSVLDINL*RGPPVSRISSA Trigger: TGCAGAAGAGATGCGGGAGACTGGAGGCCCACGTCAAAGGTTGATGTCAAGGACAGATAAAGCCCACCGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029030.9 ENSMUST00000140908.2 |
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| CDS GCA 72 bp | TCCAGTCTCCCGCATCTCTTCTGCAGCTGGCCTTTCTaGTCTCCCGGAATAACTGGTGACATCTCTGGTGCG | + |
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Preference number: 6 (lower is better) Translates to: SSLPHLFCSWPF*SPGITGDISGA Trigger: CGCACCAGAGATGTCACCAGTTATTCCGGGAGAGCAGAAAGGCCAGCTGCAGAAGAGATGCGGGAGACTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| CDS GCA 72 bp | TCCAGTCTCCCGCATCTCTTCTGCAGCTGGCCTTTCTaGTCTGGTGACATCTCTGGTGCGTGCACAGAAGTG | + |
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Preference number: 6 (lower is better) Translates to: SSLPHLFCSWPF*SGDISGACTEV Trigger: CACTTCTGTGCACGCACCAGAGATGTCACCAGAGCAGAAAGGCCAGCTGCAGAAGAGATGCGGGAGACTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140908.2 |
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| CDS GCA 72 bp | TGCTCTGGTGACATCTCTGGTGCGTGCACAGAAGTGTaGACAGGCCTTGTCATCCGCCCCCATACAAGTACA | + |
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Preference number: 6 (lower is better) Translates to: CSGDISGACTEV*TGLVIRPHTST Trigger: TGTACTTGTATGGGGGCGGATGACAAGGCCTGTGCACACTTCTGTGCACGCACCAGAGATGTCACCAGAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140908.2 |
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| CDS CAA 72 bp | ACATCTCTGGTGCGTGCACAGAAGTGTGCACAGGCCTaGTCATCCGCCCCCATACAAGTACAACGCAAGCGT | + |
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Preference number: 6 (lower is better) Translates to: TSLVRAQKCAQA*SSAPIQVQRKR Trigger: ACGCTTGCGTTGTACTTGTATGGGGGCGGATGACAAGGCCTGTGCACACTTCTGTGCACGCACCAGAGATGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029030.9 ENSMUST00000140908.2 |
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| CDS CCA 72 bp | ATACAAGTACAACGCAAGCGTGTCCACGGAGAAGGCTaGGAGCTTTCTGGAACTGGCCCCAAGGACCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: IQVQRKRVHGEG*ELSGTGPKDLF Trigger: AAAGAGGTCCTTGGGGCCAGTTCCAGAAAGCTCCCAGCCTTCTCCGTGGACACGCTTGCGTTGTACTTGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029030.9 ENSMUST00000140908.2 |
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| CDS GCA 72 bp | ATAACTGGTGACATCTCTGGTGCGTGCACAGAAGTGTaGACAGGCCTTGTCATCCGCCCCCATACAAGTACA | + |
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Preference number: 6 (lower is better) Translates to: ITGDISGACTEV*TGLVIRPHTST Trigger: TGTACTTGTATGGGGGCGGATGACAAGGCCTGTGCACACTTCTGTGCACGCACCAGAGATGTCACCAGTTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029030.9 |
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| CDS CCA 72 bp | CCAAGGACCTCTTTCCCCGAAGGCTTTCTCTGTAGTTaGACAGTCCATAGGGCACAGTCTGTTCAGGAGTGT | + |
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Preference number: 6 (lower is better) Translates to: PRTSFPEGFLCS*TVHRAQSVQEC Trigger: ACACTCCTGAACAGACTGTGCCCTATGGACTGTCCAACTACAGAGAAAGCCTTCGGGGAAAGAGGTCCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029030.9 ENSMUST00000140908.2 |
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