Pregenerated sensors for EDN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028635Ensembl transcript IDs: ENSMUST00000030384.5
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACTGTTCAGTCTCCAGGTGTGGCTTAGGTAATTGTGTCCTGCTGTaGGATTGCTCCTGGATTTCAGTCCAGCAAACAGGACATTCCGTA | + |
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Preference number: 1 (lower is better) Translates to: DCSVSRCGLGNCVLL*DCSWISVQQTGHSV Trigger: TACGGAATGTCCTGTTTGCTGGACTGAAATCCAGGAGCAATCCCACAGCAGGACACAATTACCTAAGCCACACCTGGAGACTGAACAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| 3UTR GCA 90 bp | TCAGTCTCCAGGTGTGGCTTAGGTAATTGTGTCCTGCTGTGGGATTaGTCCTGGATTTCAGTCCAGCAAACAGGACATTCCGTAAGATAC | + |
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Preference number: 1 (lower is better) Translates to: SVSRCGLGNCVLLWD*SWISVQQTGHSVRY Trigger: GTATCTTACGGAATGTCCTGTTTGCTGGACTGAAATCCAGGAGCAATCCCACAGCAGGACACAATTACCTAAGCCACACCTGGAGACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| 3UTR GCA 90 bp | AAGCAAATAAGTTATATACAGATGAGCGAAGTACAGCAGGTTCTGTaGTCCCAAAAGTGTCCCAAGAGAACAGTTTGTAAGACCTCTAGG | + |
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Preference number: 1 (lower is better) Translates to: KQISYIQMSEVQQVL*SQKCPKRTVCKTSR Trigger: CCTAGAGGTCTTACAAACTGTTCTCTTGGGACACTTTTGGGAGCACAGAACCTGCTGTACTTCGCTCATCTGTATATAACTTATTTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| 3UTR-3UTR GCA 90 bp | TGGATTTCAGTCCAGCAAACAGGACATTCCGTAAGATACAGTCAGCATGTTCATCCAGCACTGGCAGGCTaGACTGCTGTCCAGGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: WISVQQTGHSVRYSQHVHPALAG*TAVQGL Trigger: CAGCCCCTGGACAGCAGTGCAGCCTGCCAGTGCTGG...ATGAACATGCTGACTGTATCTTACGGAATGTCCTGTTTGCTGGACTGAAATCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| 3UTR-3UTR TCA 90 bp | CAGATGAGCGAAGTACAGCAGGTTCTGTGCTCCCAAAAGTGTCCCAAGAGAACATGTCAGTCATTAGGATaGCTGTTCAGTCTCCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: QMSEVQQVLCSQKCPKRTCQSLG*LFSLQV Trigger: CACCTGGAGACTGAACAGTCATCCTAATGACTGACA...TGTTCTCTTGGGACACTTTTGGGAGCACAGAACCTGCTGTACTTCGCTCATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| 3UTR-3UTR CCA 90 bp | CAGATGAGCGAAGTACAGCAGGTTCTGTGCTCCCAAAAGTGTCCCAAGAGAACACTGTGGGATTGCTCCTaGATTTCAGTCCAGCAAACA | + |
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Preference number: 2 (lower is better) Translates to: QMSEVQQVLCSQKCPKRTLWDCS*ISVQQT Trigger: TGTTTGCTGGACTGAAATCCAGGAGCAATCCCACAG...TGTTCTCTTGGGACACTTTTGGGAGCACAGAACCTGCTGTACTTCGCTCATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| 3UTR TCA 72 bp | TCTCCCAGCAGCTGCCCGTTTCCTCCTGTCTCCACGTaGGCTTCTTTTTCAATGGTCCTGCAGCTCATGGTG | + |
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Preference number: 3 (lower is better) Translates to: SPSSCPFPPVST*ASFSMVLQLMV Trigger: CACCATGAGCTGCAGGACCATTGAAAAAGAAGCTCACGTGGAGACAGGAGGAAACGGGCAGCTGCTGGGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| 3UTR CCA 72 bp | GTCTCCAGGTGTGGCTTAGGTAATTGTGTCCTGCTGTaGGATTGCTCCTGGATTTCAGTCCAGCAAACAGGA | + |
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Preference number: 3 (lower is better) Translates to: VSRCGLGNCVLL*DCSWISVQQTG Trigger: TCCTGTTTGCTGGACTGAAATCCAGGAGCAATCCCACAGCAGGACACAATTACCTAAGCCACACCTGGAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| 3UTR GCA 72 bp | AGGTGTGGCTTAGGTAATTGTGTCCTGCTGTGGGATTaGTCCTGGATTTCAGTCCAGCAAACAGGACATTCC | + |
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Preference number: 3 (lower is better) Translates to: RCGLGNCVLLWD*SWISVQQTGHS Trigger: GGAATGTCCTGTTTGCTGGACTGAAATCCAGGAGCAATCCCACAGCAGGACACAATTACCTAAGCCACACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| 3UTR GCA 72 bp | AGTTATATACAGATGAGCGAAGTACAGCAGGTTCTGTaGTCCCAAAAGTGTCCCAAGAGAACAGTTTGTAAG | + |
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Preference number: 3 (lower is better) Translates to: SYIQMSEVQQVL*SQKCPKRTVCK Trigger: CTTACAAACTGTTCTCTTGGGACACTTTTGGGAGCACAGAACCTGCTGTACTTCGCTCATCTGTATATAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| CDS-3UTR CCA 90 bp | TGTCCAGGGGCTGATGGTGGCTCTGGCAGTGTTAAGGCACAGAGCTGCTGTAAGCCTCTGGCTGTAGCCTaGCAAAGCGGAGCTTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: CPGADGGSGSVKAQSCCKPLAVA*QSGAWW Trigger: CCACCAAGCTCCGCTTTGCCAGGCTACAGCCAGAGG...CTTACAGCAGCTCTGTGCCTTAACACTGCCAGAGCCACCATCAGCCCCTGGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| CDS-3UTR GCA 90 bp | CTGTGCTCCCAAAAGTGTCCCAAGAGAACAGTTTGTAAGACCTCTAGGGAAGGGCTCCAGGGTGGCAGCTaGCTGGCCCTTCCCTTCATG | + |
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Preference number: 4 (lower is better) Translates to: LCSQKCPKRTVCKTSREGLQGGS*LALPFM Trigger: CATGAAGGGAAGGGCCAGGCAGCTGCCACCCTGGAG...CCCTTCCCTAGAGGTCTTACAAACTGTTCTCTTGGGACACTTTTGGGAGCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| CDS-3UTR GCA 90 bp | CAGATGAGCGAAGTACAGCAGGTTCTGTGCTCCCAAAAGTGTCCCAAGAGAACACAGCAGGAGCCTGGCTaGTTGGGGCGACCACAGCTT | + |
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Preference number: 4 (lower is better) Translates to: QMSEVQQVLCSQKCPKRTQQEPG*LGRPQL Trigger: AAGCTGTGGTCGCCCCAAGCAGCCAGGCTCCTGCTG...TGTTCTCTTGGGACACTTTTGGGAGCACAGAACCTGCTGTACTTCGCTCATCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| CDS-3UTR CCA 90 bp | ATTTCAGTCCAGCAAACAGGACATTCCGTAAGATACAGTCAGCATGTTCATTTGGCGGCGCCGGCGCCTTaGCGGGTTTCCCAGGCCGTA | + |
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Preference number: 4 (lower is better) Translates to: ISVQQTGHSVRYSQHVHLAAPAP*RVSQAV Trigger: TACGGCCTGGGAAACCCGCCAAGGCGCCGGCGCCGC...CAAATGAACATGCTGACTGTATCTTACGGAATGTCCTGTTTGCTGGACTGAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| CDS-3UTR CCA 90 bp | TGGATTTCAGTCCAGCAAACAGGACATTCCGTAAGATACAGTCAGCATGTTCATGCACTCACAACGCTTTaGCAGGGAGCGGCGCCGGCG | + |
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Preference number: 4 (lower is better) Translates to: WISVQQTGHSVRYSQHVHALTTL*QGAAPA Trigger: CGCCGGCGCCGCTCCCTGCCAAAGCGTTGTGAGTGC...ATGAACATGCTGACTGTATCTTACGGAATGTCCTGTTTGCTGGACTGAAATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| CDS-3UTR GCA 90 bp | AGATACAGTCAGCATGTTCATTTGTCCTCACATAGCTCCTCCAAGCAGGTACAGTGGCCCTTCCCTTCATaGAGGGCCAAAAGCAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: RYSQHVHLSSHSSSKQVQWPFPS*RAKSRA Trigger: GGCCCTGCTTTTGGCCCTGCATGAAGGGAAGGGCCA...CTGTACCTGCTTGGAGGAGCTATGTGAGGACAAATGAACATGCTGACTGTATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| CDS GCA 90 bp | CGAAAACGCAGGTGGGGGCCTCGGCCCTTGGGTGCCGAGGCCGGCTaGTCCAGGGTGGCAGCTGCCTGGCCCTTCCCTTCATGCAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: RKRRWGPRPLGAEAG*SRVAAAWPFPSCRA Trigger: GGCCCTGCATGAAGGGAAGGGCCAGGCAGCTGCCACCCTGGAGCAGCCGGCCTCGGCACCCAAGGGCCGAGGCCCCCACCTGCGTTTTCG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| CDS GCA 90 bp | GCAGGAGCATCGACGAAAACGCAGGTGGGGGCCTCGGCCCTTGGGTaGCGAGGCCGGCTGCTCCAGGGTGGCAGCTGCCTGGCCCTTCCC | + |
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Preference number: 5 (lower is better) Translates to: AGASTKTQVGASALG*RGRLLQGGSCLALP Trigger: GGGAAGGGCCAGGCAGCTGCCACCCTGGAGCAGCCGGCCTCGGCACCCAAGGGCCGAGGCCCCCACCTGCGTTTTCGTCGATGCTCCTGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| CDS GCA 90 bp | GAGGCCGGCTGCTCCAGGGTGGCAGCTGCCTGGCCCTTCCCTTCATaGAGGGCCAAAAGCAGGGCCAGAGCGATGGAACACCAGGCGGAG | + |
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Preference number: 5 (lower is better) Translates to: EAGCSRVAAAWPFPS*RAKSRARAMEHQAE Trigger: CTCCGCCTGGTGTTCCATCGCTCTGGCCCTGCTTTTGGCCCTGCATGAAGGGAAGGGCCAGGCAGCTGCCACCCTGGAGCAGCCGGCCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| CDS CCA 90 bp | GGTAGCACAGGCAGAGTCCCCCGCAGTAGAGCACTCACAACGCTTTaGCAGGGAGCGGCGCCGGCGCCTTGGCGGGTTTCCCAGGCCGTA | + |
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Preference number: 5 (lower is better) Translates to: GSTGRVPRSRALTTL*QGAAPAPWRVSQAV Trigger: TACGGCCTGGGAAACCCGCCAAGGCGCCGGCGCCGCTCCCTGCCAAAGCGTTGTGAGTGCTCTACTGCGGGGGACTCTGCCTGTGCTACC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| CDS CCA 90 bp | TCCTTGTCAAGCCAGGAGTTGCAGGAGCATCGACGAAAACGCAGGTaGGGGCCTCGGCCCTTGGGTGCCGAGGCCGGCTGCTCCAGGGTG | + |
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Preference number: 5 (lower is better) Translates to: SLSSQELQEHRRKRR*GPRPLGAEAGCSRV Trigger: CACCCTGGAGCAGCCGGCCTCGGCACCCAAGGGCCGAGGCCCCCACCTGCGTTTTCGTCGATGCTCCTGCAACTCCTGGCTTGACAAGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| CDS CCA 90 bp | AGTAGAGCACTCACAACGCTTTGGCAGGGAGCGGCGCCGGCGCCTTaGCGGGTTTCCCAGGCCGTAGGGAGCTGTCTGTCCCGCAGTGTT | + |
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Preference number: 5 (lower is better) Translates to: SRALTTLWQGAAPAP*RVSQAVGSCLSRSV Trigger: AACACTGCGGGACAGACAGCTCCCTACGGCCTGGGAAACCCGCCAAGGCGCCGGCGCCGCTCCCTGCCAAAGCGTTGTGAGTGCTCTACT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| CDS-3UTR CAA 90 bp | TGTGGCTTAGGTAATTGTGTCCTGCTGTGGGATTGCTCCTGGATTTCAGTCCAGAGCGGCGCCGGCGCCTaGGCGGGTTTCCCAGGCCGT | + |
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Preference number: 5 (lower is better) Translates to: CGLGNCVLLWDCSWISVQSGAGA*AGFPGR Trigger: ACGGCCTGGGAAACCCGCCAAGGCGCCGGCGCCGCT...CTGGACTGAAATCCAGGAGCAATCCCACAGCAGGACACAATTACCTAAGCCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| CDS GCA 90 bp | TATCCCTCAGCTTTCGGAGGAGGTCTCCCTCAGCAGTCCACATCTTaGCAGTCTTTAACACAGCAGCAGGAGCCTGGCTGCTTGGGGCGA | + |
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Preference number: 5 (lower is better) Translates to: YPSAFGGGLPQQSTS*QSLTQQQEPGCLGR Trigger: TCGCCCCAAGCAGCCAGGCTCCTGCTGCTGTGTTAAAGACTGGCAAGATGTGGACTGCTGAGGGAGACCTCCTCCGAAAGCTGAGGGATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| CDS-3UTR CAA 90 bp | GAGATAGGCATAGGGGTCTCCCAGCAGCTGCCCGTTTCCTCCTGTCTCCACGTGTTGTCAAGCCAGGAGTaGCAGGAGCATCGACGAAAA | + |
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Preference number: 5 (lower is better) Translates to: EIGIGVSQQLPVSSCLHVLSSQE*QEHRRK Trigger: TTTTCGTCGATGCTCCTGCAACTCCTGGCTTGACAA...CACGTGGAGACAGGAGGAAACGGGCAGCTGCTGGGAGACCCCTATGCCTATCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| CDS-3UTR CAA 90 bp | TGGGATTGCTCCTGGATTTCAGTCCAGCAAACAGGACATTCCGTAAGATACAGTAGCACTCACAACGCTTaGGCAGGGAGCGGCGCCGGC | + |
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Preference number: 5 (lower is better) Translates to: WDCSWISVQQTGHSVRYSSTHNA*AGSGAG Trigger: GCCGGCGCCGCTCCCTGCCAAAGCGTTGTGAGTGCT...ACTGTATCTTACGGAATGTCCTGTTTGCTGGACTGAAATCCAGGAGCAATCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| CDS-3UTR CAA 90 bp | ATAAGTTATATACAGATGAGCGAAGTACAGCAGGTTCTGTGCTCCCAAAAGTGTCAGGGATGGCCTTTCTaGTCACCTCTGGCTGTAGCC | + |
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Preference number: 5 (lower is better) Translates to: ISYIQMSEVQQVLCSQKCQGWPF*SPLAVA Trigger: GGCTACAGCCAGAGGTGACAAGAAAGGCCATCCCTG...ACACTTTTGGGAGCACAGAACCTGCTGTACTTCGCTCATCTGTATATAACTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| CDS-3UTR CAA 90 bp | TTATATACAGATGAGCGAAGTACAGCAGGTTCTGTGCTCCCAAAAGTGTCCCAAAAGTACACACATTCCTaGTCAAGCCAGGAGTTGCAG | + |
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Preference number: 5 (lower is better) Translates to: LYTDERSTAGSVLPKVSQKYTHS*SSQELQ Trigger: CTGCAACTCCTGGCTTGACAAGGAATGTGTGTACTT...TTGGGACACTTTTGGGAGCACAGAACCTGCTGTACTTCGCTCATCTGTATATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| CDS CAA 90 bp | GAGTTGCAGGAGCATCGACGAAAACGCAGGTGGGGGCCTCGGCCCTaGGGTGCCGAGGCCGGCTGCTCCAGGGTGGCAGCTGCCTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: ELQEHRRKRRWGPRP*GAEAGCSRVAAAWP Trigger: GGGCCAGGCAGCTGCCACCCTGGAGCAGCCGGCCTCGGCACCCAAGGGCCGAGGCCCCCACCTGCGTTTTCGTCGATGCTCCTGCAACTC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| CDS CAA 72 bp | GAGCATCGACGAAAACGCAGGTGGGGGCCTCGGCCCTaGGGTGCCGAGGCCGGCTGCTCCAGGGTGGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: EHRRKRRWGPRP*GAEAGCSRVAA Trigger: AGCTGCCACCCTGGAGCAGCCGGCCTCGGCACCCAAGGGCCGAGGCCCCCACCTGCGTTTTCGTCGATGCTC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| CDS CCA 72 bp | CTCACAACGCTTTGGCAGGGAGCGGCGCCGGCGCCTTaGCGGGTTTCCCAGGCCGTAGGGAGCTGTCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: LTTLWQGAAPAP*RVSQAVGSCLS Trigger: GGACAGACAGCTCCCTACGGCCTGGGAAACCCGCCAAGGCGCCGGCGCCGCTCCCTGCCAAAGCGTTGTGAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| CDS CCA 72 bp | GGCAGAGTCCCCCGCAGTAGAGCACTCACAACGCTTTaGCAGGGAGCGGCGCCGGCGCCTTGGCGGGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: GRVPRSRALTTL*QGAAPAPWRVS Trigger: GGAAACCCGCCAAGGCGCCGGCGCCGCTCCCTGCCAAAGCGTTGTGAGTGCTCTACTGCGGGGGACTCTGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| CDS CCA 72 bp | CTTGGGGCGACCACAGCTTCAGGCCAGTGTCTTCGATaGCAGAAGGTAGCACAGGCAGAGTCCCCCGCAGTA | + |
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Preference number: 6 (lower is better) Translates to: LGATTASGQCLR*QKVAQAESPAV Trigger: TACTGCGGGGGACTCTGCCTGTGCTACCTTCTGCCATCGAAGACACTGGCCTGAAGCTGTGGTCGCCCCAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| CDS CAA 90 bp | TCCACATCTTGCCAGTCTTTAACACAGCAGCAGGAGCCTGGCTGCTaGGGGCGACCACAGCTTCAGGCCAGTGTCTTCGATGGCAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: STSCQSLTQQQEPGC*GRPQLQASVFDGRR Trigger: CCTTCTGCCATCGAAGACACTGGCCTGAAGCTGTGGTCGCCCCAAGCAGCCAGGCTCCTGCTGCTGTGTTAAAGACTGGCAAGATGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| CDS CAA 90 bp | ATATCCCTCAGCTTTCGGAGGAGGTCTCCCTCAGCAGTCCACATCTaGCCAGTCTTTAACACAGCAGCAGGAGCCTGGCTGCTTGGGGCG | + |
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Preference number: 6 (lower is better) Translates to: ISLSFRRRSPSAVHI*PVFNTAAGAWLLGA Trigger: CGCCCCAAGCAGCCAGGCTCCTGCTGCTGTGTTAAAGACTGGCAAGATGTGGACTGCTGAGGGAGACCTCCTCCGAAAGCTGAGGGATAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| CDS GCA 72 bp | TCTTGCCAGTCTTTAACACAGCAGCAGGAGCCTGGCTaGTTGGGGCGACCACAGCTTCAGGCCAGTGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SCQSLTQQQEPG*LGRPQLQASVF Trigger: GAAGACACTGGCCTGAAGCTGTGGTCGCCCCAAGCAGCCAGGCTCCTGCTGCTGTGTTAAAGACTGGCAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| CDS GCA 72 bp | GCTTTCGGAGGAGGTCTCCCTCAGCAGTCCACATCTTaGCAGTCTTTAACACAGCAGCAGGAGCCTGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: AFGGGLPQQSTS*QSLTQQQEPGC Trigger: GCAGCCAGGCTCCTGCTGCTGTGTTAAAGACTGGCAAGATGTGGACTGCTGAGGGAGACCTCCTCCGAAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| CDS CAA 72 bp | TGCCAGTCTTTAACACAGCAGCAGGAGCCTGGCTGCTaGGGGCGACCACAGCTTCAGGCCAGTGTCTTCGAT | + |
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Preference number: 6 (lower is better) Translates to: CQSLTQQQEPGC*GRPQLQASVFD Trigger: ATCGAAGACACTGGCCTGAAGCTGTGGTCGCCCCAAGCAGCCAGGCTCCTGCTGCTGTGTTAAAGACTGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| CDS CAA 72 bp | CTTGTCACCTCTGGCTGTAGCCTGGCAAAGCGGAGCTaGGTGGCTGAGATATCCCTCAGCTTTCGGAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: LVTSGCSLAKRS*VAEISLSFRRR Trigger: CCTCCTCCGAAAGCTGAGGGATATCTCAGCCACCAAGCTCCGCTTTGCCAGGCTACAGCCAGAGGTGACAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| CDS CCA 72 bp | CAGGGATGGCCTTTCTTGTCACCTCTGGCTGTAGCCTaGCAAAGCGGAGCTTGGTGGCTGAGATATCCCTCA | + |
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Preference number: 6 (lower is better) Translates to: QGWPFLSPLAVA*QSGAWWLRYPS Trigger: TGAGGGATATCTCAGCCACCAAGCTCCGCTTTGCCAGGCTACAGCCAGAGGTGACAAGAAAGGCCATCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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| CDS CAA 72 bp | AGCTTTCGGAGGAGGTCTCCCTCAGCAGTCCACATCTaGCCAGTCTTTAACACAGCAGCAGGAGCCTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SFRRRSPSAVHI*PVFNTAAGAWL Trigger: CAGCCAGGCTCCTGCTGCTGTGTTAAAGACTGGCAAGATGTGGACTGCTGAGGGAGACCTCCTCCGAAAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030384.5 |
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