Pregenerated sensors for EDEM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030104Ensembl transcript IDs: ENSMUST00000089162.5, ENSMUST00000204804.3
Found 258 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCAGGAACAGAAAGGCAAAGATCAGCACCTTCTTCCCAAGTCCCTaGTCGGCCACTCTGCGCGTGCGCCTGAGGTGGCCCAGCCCTACC | + |
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Preference number: 1 (lower is better) Translates to: ARNRKAKISTFFPSP*SATLRVRLRWPSPT Trigger: GGTAGGGCTGGGCCACCTCAGGCGCACGCGCAGAGTGGCCGAGCAGGGACTTGGGAAGAAGGTGCTGATCTTTGCCTTTCTGTTCCTGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR GCA 90 bp | GGCCTGTCCCAGTGCAAGGAGGCCAAGCCAGGGCAGGCCCAGCTCTaGCTTTTAGGAACAGTTTGTGCAAACTTCCCATGTGCAGAGCTT | + |
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Preference number: 1 (lower is better) Translates to: GLSQCKEAKPGQAQL*LLGTVCANFPCAEL Trigger: AAGCTCTGCACATGGGAAGTTTGCACAAACTGTTCCTAAAAGGCAGAGCTGGGCCTGCCCTGGCTTGGCCTCCTTGCACTGGGACAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR GCA 90 bp | GGCCAAGCCAGGGCAGGCCCAGCTCTGCCTTTTAGGAACAGTTTGTaGAAACTTCCCATGTGCAGAGCTTCCCATTTCACCTACAGAACA | + |
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Preference number: 1 (lower is better) Translates to: GQARAGPALPFRNSL*KLPMCRASHFTYRT Trigger: TGTTCTGTAGGTGAAATGGGAAGCTCTGCACATGGGAAGTTTGCACAAACTGTTCCTAAAAGGCAGAGCTGGGCCTGCCCTGGCTTGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR CCA 90 bp | TTGAACCAGCTTTCTCATAAACTTCTACCCTTTGCCTTTGGTATTTaGCCTGTCCCAGTGCAAGGAGGCCAAGCCAGGGCAGGCCCAGCT | + |
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Preference number: 1 (lower is better) Translates to: LNQLSHKLLPFAFGI*PVPVQGGQARAGPA Trigger: AGCTGGGCCTGCCCTGGCTTGGCCTCCTTGCACTGGGACAGGCCAAATACCAAAGGCAAAGGGTAGAAGTTTATGAGAAAGCTGGTTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR CCA 90 bp | CTAAAAAGCACTAAGTGCAAGATTCAACCAGAGGTGAGTAAGAGCTaGACAGAAACTTCGACAGCATCACAGATGGGCAGGCTCCACCGC | + |
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Preference number: 1 (lower is better) Translates to: LKSTKCKIQPEVSKS*TETSTASQMGRLHR Trigger: GCGGTGGAGCCTGCCCATCTGTGATGCTGTCGAAGTTTCTGTCCAGCTCTTACTCACCTCTGGTTGAATCTTGCACTTAGTGCTTTTTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR CCA 90 bp | AAGTACGCTCCAGTAGAAGAGCAGGAAGAAACTCAAGGGAGGCTCTaGGAAACAAGCCTGGTTTCCACAGCTACCAAAGCAATCCGAAAG | + |
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Preference number: 1 (lower is better) Translates to: KYAPVEEQEETQGRL*ETSLVSTATKAIRK Trigger: CTTTCGGATTGCTTTGGTAGCTGTGGAAACCAGGCTTGTTTCCCAGAGCCTCCCTTGAGTTTCTTCCTGCTCTTCTACTGGAGCGTACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR TCA 90 bp | TCAGCACAGCAACGGGGGCAAAGCAAGGAGACTGGGTGCTATGTGTaGAGCTGGAAGAAGAATCCAAAGAGGCTAATATCCATTGTGCTT | + |
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Preference number: 1 (lower is better) Translates to: SAQQRGQSKETGCYV*SWKKNPKRLISIVL Trigger: AAGCACAATGGATATTAGCCTCTTTGGATTCTTCTTCCAGCTTCACACATAGCACCCAGTCTCCTTGCTTTGCCCCCGTTGCTGTGCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR TCA 90 bp | TCAGAAGAAAAGGGATGTCCAGTGCAGAGTCTACAGGATCCAAAGTaGAGAACTGCAGTGGACACTCATTCACTGAGCTGGTGGGGAGAT | + |
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Preference number: 1 (lower is better) Translates to: SEEKGCPVQSLQDPK*RTAVDTHSLSWWGD Trigger: ATCTCCCCACCAGCTCAGTGAATGAGTGTCCACTGCAGTTCTTCACTTTGGATCCTGTAGACTCTGCACTGGACATCCCTTTTCTTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR TCA 90 bp | AGGAGATTTTGGTACACTTGGGTTTGGTTTAAGTTCTGGCCACATTaGGGTGAGCAGGTCAAATCAAGCCAACCATCTGGTCGATCTGGC | + |
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Preference number: 1 (lower is better) Translates to: RRFWYTWVWFKFWPH*GEQVKSSQPSGRSG Trigger: GCCAGATCGACCAGATGGTTGGCTTGATTTGACCTGCTCACCTCAATGTGGCCAGAACTTAAACCAAACCCAAGTGTACCAAAATCTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204804.3 |
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| 3UTR GCA 90 bp | TCAAGAGAACAAGATCTCAGAGCTCAGAAGAAAAGGGATGTCCAGTaGAGAGTCTACAGGATCCAAAGTGAAGAACTGCAGTGGACACTC | + |
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Preference number: 1 (lower is better) Translates to: SREQDLRAQKKRDVQ*RVYRIQSEELQWTL Trigger: GAGTGTCCACTGCAGTTCTTCACTTTGGATCCTGTAGACTCTGCACTGGACATCCCTTTTCTTCTGAGCTCTGAGATCTTGTTCTCTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR TCA 90 bp | CAGAGAGAAAAGGGATGGCGCTTTGATTTCAGTAGTGATGCCAAGTaGACTTCAGGACCTTTGCACAGGAATTGCATTCCTGATCCTCTA | + |
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Preference number: 1 (lower is better) Translates to: QREKGWRFDFSSDAK*TSGPLHRNCIPDPL Trigger: TAGAGGATCAGGAATGCAATTCCTGTGCAAAGGTCCTGAAGTTCACTTGGCATCACTACTGAAATCAAAGCGCCATCCCTTTTCTCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR TCA 90 bp | GGAACACGATTACAATTAGAACTGGAGTTAATGACTCTGAGCTCCTaGGACTTAGGTCTGTGTACAAACTTTTCCTCTTGGTCCCGCTCC | + |
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Preference number: 1 (lower is better) Translates to: GTRLQLELELMTLSS*DLGLCTNFSSWSRS Trigger: GGAGCGGGACCAAGAGGAAAAGTTTGTACACAGACCTAAGTCTCAGGAGCTCAGAGTCATTAACTCCAGTTCTAATTGTAATCGTGTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204804.3 |
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| 3UTR GCA 90 bp | GGCCCAGCTCTGCCTTTTAGGAACAGTTTGTGCAAACTTCCCATGTaGAGAGCTTCCCATTTCACCTACAGAACAACAAAAGCAATTTCT | + |
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Preference number: 1 (lower is better) Translates to: GPALPFRNSLCKLPM*RASHFTYRTTKAIS Trigger: AGAAATTGCTTTTGTTGTTCTGTAGGTGAAATGGGAAGCTCTGCACATGGGAAGTTTGCACAAACTGTTCCTAAAAGGCAGAGCTGGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR CCA 90 bp | GGCAGTAGACAGTGTTCTTCATCTAGCCCCACAAATCACTGGCTTTaGTCTCAGCAGTCTAGAAACTCAATGGTAAGATTTACAGGCATT | + |
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Preference number: 1 (lower is better) Translates to: GSRQCSSSSPTNHWL*SQQSRNSMVRFTGI Trigger: AATGCCTGTAAATCTTACCATTGAGTTTCTAGACTGCTGAGACCAAAGCCAGTGATTTGTGGGGCTAGATGAAGAACACTGTCTACTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR GCA 90 bp | TCTATGGCGGCCAAGCATATTGCACATCACAGAGAGAAACATTTGTaGATCTCAGCAAGTTTTCCCAGAGTTTCCAACTCTAGACTTTGT | + |
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Preference number: 1 (lower is better) Translates to: SMAAKHIAHHREKHL*ISASFPRVSNSRLC Trigger: ACAAAGTCTAGAGTTGGAAACTCTGGGAAAACTTGCTGAGATGCACAAATGTTTCTCTCTGTGATGTGCAATATGCTTGGCCGCCATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR CCA 90 bp | ATGTCTGGCAGTAGACAGTGTTCTTCATCTAGCCCCACAAATCACTaGCTTTGGTCTCAGCAGTCTAGAAACTCAATGGTAAGATTTACA | + |
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Preference number: 1 (lower is better) Translates to: MSGSRQCSSSSPTNH*LWSQQSRNSMVRFT Trigger: TGTAAATCTTACCATTGAGTTTCTAGACTGCTGAGACCAAAGCCAGTGATTTGTGGGGCTAGATGAAGAACACTGTCTACTGCCAGACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR CCA 90 bp | TACGTAGTTTGCAACTTTTCACATGTTGGCCAAACTGGACACTACTaGCTACTCCTGGGAACACAAGCATGGTTACAAACATCCATGAAA | + |
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Preference number: 1 (lower is better) Translates to: YVVCNFSHVGQTGHY*LLLGTQAWLQTSMK Trigger: TTTCATGGATGTTTGTAACCATGCTTGTGTTCCCAGGAGTAGCCAGTAGTGTCCAGTTTGGCCAACATGTGAAAAGTTGCAAACTACGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR TCA 90 bp | GGCACTACCCTCACATGCTTTCACTTCAACACACAGAAAAGTATTTaGATGTCATGTGCAGAGTCTACAATCCAAGACAAGGAAAGTCCA | + |
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Preference number: 1 (lower is better) Translates to: GTTLTCFHFNTQKSI*MSCAESTIQDKESP Trigger: TGGACTTTCCTTGTCTTGGATTGTAGACTCTGCACATGACATTCAAATACTTTTCTGTGTGTTGAAGTGAAAGCATGTGAGGGTAGTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR GCA 90 bp | CACATGCTTTCACTTCAACACACAGAAAAGTATTTGAATGTCATGTaGAGAGTCTACAATCCAAGACAAGGAAAGTCCAGACATCAGAAC | + |
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Preference number: 1 (lower is better) Translates to: HMLSLQHTEKYLNVM*RVYNPRQGKSRHQN Trigger: GTTCTGATGTCTGGACTTTCCTTGTCTTGGATTGTAGACTCTGCACATGACATTCAAATACTTTTCTGTGTGTTGAAGTGAAAGCATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR CCA 90 bp | TTAAATACAGTTCTTATTTACAGATTAAACATGAAGTACCATCTATaGCGGCCAAGCATATTGCACATCACAGAGAGAAACATTTGTGCA | + |
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Preference number: 1 (lower is better) Translates to: LNTVLIYRLNMKYHL*RPSILHITERNICA Trigger: TGCACAAATGTTTCTCTCTGTGATGTGCAATATGCTTGGCCGCCATAGATGGTACTTCATGTTTAATCTGTAAATAAGAACTGTATTTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR-3UTR TCA 90 bp | GGCTCTGATTCACACGGGGTCCCTGCCTTGCAGGGAAGAGGCACTAGAGCAGGTCTCTGCGCGTGCGCCTaGGGTGGCCCAGCCCTACCC | + |
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Preference number: 2 (lower is better) Translates to: GSDSHGVPALQGRGTRAGLCACA*GGPALP Trigger: GGGTAGGGCTGGGCCACCTCAGGCGCACGCGCAGAG...ACCTGCTCTAGTGCCTCTTCCCTGCAAGGCAGGGACCCCGTGTGAATCAGAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR-3UTR GCA 90 bp | CACCTTCTTCCCAAGTCCCTGCTCGGCCACTCTGCGCGTGCGCCTGAGGTGGCCTTTGGCCTGTCCCAGTaGAAGGAGGCCAAGCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: HLLPKSLLGHSARAPEVAFGLSQ*KEAKPG Trigger: CCCTGGCTTGGCCTCCTTGCACTGGGACAGGCCAAA...GGCCACCTCAGGCGCACGCGCAGAGTGGCCGAGCAGGGACTTGGGAAGAAGGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR-3UTR TCA 90 bp | GGCTCTGATTCACACGGGGTCCCTGCCTTGCAGGGAAGAGGCACTAGAGCAGGTGAGGGATATTTTCCTTaGGAGAGAAGGGAAGACAGG | + |
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Preference number: 2 (lower is better) Translates to: GSDSHGVPALQGRGTRAGEGYFP*ERREDR Trigger: CCTGTCTTCCCTTCTCTCTCAAGGAAAATATCCCTC...ACCTGCTCTAGTGCCTCTTCCCTGCAAGGCAGGGACCCCGTGTGAATCAGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR-3UTR GCA 90 bp | GAAACCAGTAAAACATGGGCTCTCAGATACTCCTCTGGGCAGGCACTACCCTCATTTGGCCTGTCCCAGTaGAAGGAGGCCAAGCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: ETSKTWALRYSSGQALPSFGLSQ*KEAKPG Trigger: CCCTGGCTTGGCCTCCTTGCACTGGGACAGGCCAAA...TGAGGGTAGTGCCTGCCCAGAGGAGTATCTGAGAGCCCATGTTTTACTGGTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR CAA 90 bp | GGAGGCCAAGCCAGGGCAGGCCCAGCTCTGCCTTTTAGGAACAGTTaGTGCAAACTTCCCATGTGCAGAGCTTCCCATTTCACCTACAGA | + |
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Preference number: 2 (lower is better) Translates to: GGQARAGPALPFRNS*CKLPMCRASHFTYR Trigger: TCTGTAGGTGAAATGGGAAGCTCTGCACATGGGAAGTTTGCACAAACTGTTCCTAAAAGGCAGAGCTGGGCCTGCCCTGGCTTGGCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR-3UTR CCA 90 bp | GGAACAGAAAGGCAAAGATCAGCACCTTCTTCCCAAGTCCCTGCTCGGCCACTCCATTCACTGAGCTGGTaGGGAGATGCTAAGAGGGAT | + |
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Preference number: 2 (lower is better) Translates to: GTERQRSAPSSQVPARPLHSLSW*GDAKRD Trigger: ATCCCTCTTAGCATCTCCCCACCAGCTCAGTGAATG...GAGTGGCCGAGCAGGGACTTGGGAAGAAGGTGCTGATCTTTGCCTTTCTGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR-3UTR TCA 90 bp | ACAGAAAGGCAAAGATCAGCACCTTCTTCCCAAGTCCCTGCTCGGCCACTCTGCCTACAGGATCCAAAGTaGAGAACTGCAGTGGACACT | + |
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Preference number: 2 (lower is better) Translates to: TERQRSAPSSQVPARPLCLQDPK*RTAVDT Trigger: AGTGTCCACTGCAGTTCTTCACTTTGGATCCTGTAG...GCAGAGTGGCCGAGCAGGGACTTGGGAAGAAGGTGCTGATCTTTGCCTTTCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR-3UTR CCA 90 bp | AAACGAGCTGTCTGTAGCAGTGGTTGTGACAGCCCATGGCCCAAACAAAACCCATCCCTAGAAGGCACCTaGTTCTGGAACCATGGGAGT | + |
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Preference number: 2 (lower is better) Translates to: KRAVCSSGCDSPWPKQNPSLEGT*FWNHGS Trigger: ACTCCCATGGTTCCAGAACCAGGTGCCTTCTAGGGA...TGGGTTTTGTTTGGGCCATGGGCTGTCACAACCACTGCTACAGACAGCTCGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR-3UTR CCA 90 bp | ACAGAAAGGCAAAGATCAGCACCTTCTTCCCAAGTCCCTGCTCGGCCACTCTGCACTACTGGCTACTCCTaGGAACACAAGCATGGTTAC | + |
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Preference number: 2 (lower is better) Translates to: TERQRSAPSSQVPARPLCTTGYS*EHKHGY Trigger: GTAACCATGCTTGTGTTCCCAGGAGTAGCCAGTAGT...GCAGAGTGGCCGAGCAGGGACTTGGGAAGAAGGTGCTGATCTTTGCCTTTCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR-3UTR GCA 90 bp | GGAACAGAAAGGCAAAGATCAGCACCTTCTTCCCAAGTCCCTGCTCGGCCACTCGAACTTCAGGACCTTTaGACAGGAATTGCATTCCTG | + |
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Preference number: 2 (lower is better) Translates to: GTERQRSAPSSQVPARPLELQDL*TGIAFL Trigger: CAGGAATGCAATTCCTGTGCAAAGGTCCTGAAGTTC...GAGTGGCCGAGCAGGGACTTGGGAAGAAGGTGCTGATCTTTGCCTTTCTGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR-3UTR GCA 90 bp | TTGAAACCAGTAAAACATGGGCTCTCAGATACTCCTCTGGGCAGGCACTACCCTGGGCAGGCCCAGCTCTaGCTTTTAGGAACAGTTTGT | + |
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Preference number: 2 (lower is better) Translates to: LKPVKHGLSDTPLGRHYPGQAQL*LLGTVC Trigger: ACAAACTGTTCCTAAAAGGCAGAGCTGGGCCTGCCC...AGGGTAGTGCCTGCCCAGAGGAGTATCTGAGAGCCCATGTTTTACTGGTTTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR CAA 90 bp | GGTTTCCACAGCTACCAAAGCAATCCGAAAGCCACCAAACATTCCTaGGTCACCTCCTCTTCCAGGAGAATGGAGTTACCCTGTCACAGT | + |
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Preference number: 2 (lower is better) Translates to: GFHSYQSNPKATKHS*VTSSSRRMELPCHS Trigger: ACTGTGACAGGGTAACTCCATTCTCCTGGAAGAGGAGGTGACCAAGGAATGTTTGGTGGCTTTCGGATTGCTTTGGTAGCTGTGGAAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR-3UTR TCA 90 bp | AGACGACTGCATTTATTGAAACCAGTAAAACATGGGCTCTCAGATACTCCTCTGGTCTGCCTGTACCCCTaGGACCCACTGGTAGCACTC | + |
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Preference number: 2 (lower is better) Translates to: RRLHLLKPVKHGLSDTPLVCLYP*DPLVAL Trigger: GAGTGCTACCAGTGGGTCTCAGGGGTACAGGCAGAC...CAGAGGAGTATCTGAGAGCCCATGTTTTACTGGTTTCAATAAATGCAGTCGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR-3UTR GCA 90 bp | ATTTGTTTACCTCTCAGAAGGAGAAGAGCAGTGAAGCAGAGTTTCACAGGTACTACGGGGTCCCTGCCTTaGAGGGAAGAGGCACTAGAG | + |
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Preference number: 2 (lower is better) Translates to: ICLPLRRRRAVKQSFTGTTGSLP*REEALE Trigger: CTCTAGTGCCTCTTCCCTGCAAGGCAGGGACCCCGT...AGTACCTGTGAAACTCTGCTTCACTGCTCTTCTCCTTCTGAGAGGTAAACAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR-3UTR CCA 90 bp | GTACCCCTGAGACCCACTGGTAGCACTCAAGGCACCATGGTACTTCCAGACACATGGTACACTTGGGTTTaGTTTAAGTTCTGGCCACAT | + |
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Preference number: 2 (lower is better) Translates to: VPLRPTGSTQGTMVLPDTWYTWV*FKFWPH Trigger: ATGTGGCCAGAACTTAAACCAAACCCAAGTGTACCA...TGTGTCTGGAAGTACCATGGTGCCTTGAGTGCTACCAGTGGGTCTCAGGGGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR-3UTR CCA 90 bp | GGAACAGAAAGGCAAAGATCAGCACCTTCTTCCCAAGTCCCTGCTCGGCCACTCGCCTGTGCATGCATGTaGTTAATACTTTTACGGAGT | + |
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Preference number: 2 (lower is better) Translates to: GTERQRSAPSSQVPARPLACACM*LILLRS Trigger: ACTCCGTAAAAGTATTAACCACATGCATGCACAGGC...GAGTGGCCGAGCAGGGACTTGGGAAGAAGGTGCTGATCTTTGCCTTTCTGTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR-3UTR CCA 90 bp | TTGAAACCAGTAAAACATGGGCTCTCAGATACTCCTCTGGGCAGGCACTACCCTATGAGAGAGAACTGCTaGGTGCCAACATACACCGCT | + |
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Preference number: 2 (lower is better) Translates to: LKPVKHGLSDTPLGRHYPMRENC*VPTYTA Trigger: AGCGGTGTATGTTGGCACCCAGCAGTTCTCTCTCAT...AGGGTAGTGCCTGCCCAGAGGAGTATCTGAGAGCCCATGTTTTACTGGTTTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR CAA 90 bp | GACTCTGAGCTCCTGAGACTTAGGTCTGTGTACAAACTTTTCCTCTaGGTCCCGCTCCCCATCTTCAGAGAAGAATTCCTTCCAAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: DSELLRLRSVYKLFL*VPLPIFREEFLPRQ Trigger: TTGCCTTGGAAGGAATTCTTCTCTGAAGATGGGGAGCGGGACCAAGAGGAAAAGTTTGTACACAGACCTAAGTCTCAGGAGCTCAGAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204804.3 |
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| 3UTR-3UTR CCA 90 bp | CAGTGTTCTTCATCTAGCCCCACAAATCACTGGCTTTGGTCTCAGCAGTCTAGAGCACTCAAGGCACCATaGTACTTCCAGACACAGATC | + |
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Preference number: 2 (lower is better) Translates to: QCSSSSPTNHWLWSQQSRALKAP*YFQTQI Trigger: GATCTGTGTCTGGAAGTACCATGGTGCCTTGAGTGC...TCTAGACTGCTGAGACCAAAGCCAGTGATTTGTGGGGCTAGATGAAGAACACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR-3UTR TCA 90 bp | CCAGACACAGATCACCATTCCAAGAGCACAGGAGCAAGAAGCAACCCAAGCTTAAGATTCAACCAGAGGTaGGTAAGAGCTGGACAGAAA | + |
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Preference number: 2 (lower is better) Translates to: PDTDHHSKSTGARSNPSLRFNQR*VRAGQK Trigger: TTTCTGTCCAGCTCTTACTCACCTCTGGTTGAATCT...TAAGCTTGGGTTGCTTCTTGCTCCTGTGCTCTTGGAATGGTGATCTGTGTCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR-3UTR TCA 90 bp | ACAGAAAGGCAAAGATCAGCACCTTCTTCCCAAGTCCCTGCTCGGCCACTCTGCGTTCTTCAGGTAAGGTaGTGCTCAAAATATATGCTA | + |
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Preference number: 2 (lower is better) Translates to: TERQRSAPSSQVPARPLCVLQVR*CSKYML Trigger: TAGCATATATTTTGAGCATCACCTTACCTGAAGAAC...GCAGAGTGGCCGAGCAGGGACTTGGGAAGAAGGTGCTGATCTTTGCCTTTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR-3UTR TCA 90 bp | CCAGACACAGATCACCATTCCAAGAGCACAGGAGCAAGAAGCAACCCAAGCTTAATGCAACGATTCAGATaGGGCTTTTCCCTGGCTATA | + |
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Preference number: 2 (lower is better) Translates to: PDTDHHSKSTGARSNPSLMQRFR*GFSLAI Trigger: TATAGCCAGGGAAAAGCCTCATCTGAATCGTTGCAT...TAAGCTTGGGTTGCTTCTTGCTCCTGTGCTCTTGGAATGGTGATCTGTGTCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR-3UTR CCA 90 bp | GTACCCCTGAGACCCACTGGTAGCACTCAAGGCACCATGGTACTTCCAGACACAATTGGTCCCATCATATaGCAATATAAAACGAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: VPLRPTGSTQGTMVLPDTIGPII*QYKTSC Trigger: ACAGCTCGTTTTATATTGCCATATGATGGGACCAAT...TGTGTCTGGAAGTACCATGGTGCCTTGAGTGCTACCAGTGGGTCTCAGGGGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR-3UTR CCA 90 bp | GGAACAGAAAGGCAAAGATCAGCACCTTCTTCCCAAGTCCCTGCTCGGCCACTCCTGGCTATAGGAGAATaGAATGAAATACTCTCAAGT | + |
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Preference number: 2 (lower is better) Translates to: GTERQRSAPSSQVPARPLLAIGE*NEILSS Trigger: ACTTGAGAGTATTTCATTCCATTCTCCTATAGCCAG...GAGTGGCCGAGCAGGGACTTGGGAAGAAGGTGCTGATCTTTGCCTTTCTGTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| 3UTR-3UTR CCA 90 bp | CAGTGTTCTTCATCTAGCCCCACAAATCACTGGCTTTGGTCTCAGCAGTCTAGAACTACTGGCTACTCCTaGGAACACAAGCATGGTTAC | + |
|
Preference number: 2 (lower is better) Translates to: QCSSSSPTNHWLWSQQSRTTGYS*EHKHGY Trigger: GTAACCATGCTTGTGTTCCCAGGAGTAGCCAGTAGT...TCTAGACTGCTGAGACCAAAGCCAGTGATTTGTGGGGCTAGATGAAGAACACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR TCA 90 bp | CACCATTCCAAGAGCACAGGAGCAAGAAGCAACCCAAGCTTAATCAAGAGCAACCCTGGACCAAAGCAGTaGGTTAGAAATTTTCTACCC | + |
|
Preference number: 2 (lower is better) Translates to: HHSKSTGARSNPSLIKSNPGPKQ*VRNFLP Trigger: GGGTAGAAAATTTCTAACTCACTGCTTTGGTCCAGG...GTTGCTCTTGATTAAGCTTGGGTTGCTTCTTGCTCCTGTGCTCTTGGAATGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR CCA 90 bp | CCCACAAATCACTGGCTTTGGTCTCAGCAGTCTAGAAACTCAATGGTAAGATTTTCCCTAGAAGGCACCTaGTTCTGGAACCATGGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: PTNHWLWSQQSRNSMVRFSLEGT*FWNHGS Trigger: ACTCCCATGGTTCCAGAACCAGGTGCCTTCTAGGGA...AAATCTTACCATTGAGTTTCTAGACTGCTGAGACCAAAGCCAGTGATTTGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR CCA 90 bp | TCTGACCAGCACTATGTTTGTCCACATCAAGAGAACAAGATCTCAGAGCTCAGAGCACTCAAGGCACCATaGTACTTCCAGACACAGATC | + |
|
Preference number: 2 (lower is better) Translates to: SDQHYVCPHQENKISELRALKAP*YFQTQI Trigger: GATCTGTGTCTGGAAGTACCATGGTGCCTTGAGTGC...TCTGAGCTCTGAGATCTTGTTCTCTTGATGTGGACAAACATAGTGCTGGTCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR GCA 90 bp | TACCCTCTGACCAGCACTATGTTTGTCCACATCAAGAGAACAAGATCTCAGAGCGAACTTCAGGACCTTTaGACAGGAATTGCATTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: YPLTSTMFVHIKRTRSQSELQDL*TGIAFL Trigger: CAGGAATGCAATTCCTGTGCAAAGGTCCTGAAGTTC...GCTCTGAGATCTTGTTCTCTTGATGTGGACAAACATAGTGCTGGTCAGAGGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR GCA 90 bp | TTGAAACCAGTAAAACATGGGCTCTCAGATACTCCTCTGGGCAGGCACTACCCTTTTAGGAACAGTTTGTaGAAACTTCCCATGTGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: LKPVKHGLSDTPLGRHYPFRNSL*KLPMCR Trigger: TCTGCACATGGGAAGTTTGCACAAACTGTTCCTAAA...AGGGTAGTGCCTGCCCAGAGGAGTATCTGAGAGCCCATGTTTTACTGGTTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR GCA 90 bp | GGAACACAAGCATGGTTACAAACATCCATGAAATTCTTCTGTTCACATTCCTGGGGGCAGGCCCAGCTCTaGCTTTTAGGAACAGTTTGT | + |
|
Preference number: 2 (lower is better) Translates to: GTQAWLQTSMKFFCSHSWGQAQL*LLGTVC Trigger: ACAAACTGTTCCTAAAAGGCAGAGCTGGGCCTGCCC...CCAGGAATGTGAACAGAAGAATTTCATGGATGTTTGTAACCATGCTTGTGTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR CCA 90 bp | AGACGACTGCATTTATTGAAACCAGTAAAACATGGGCTCTCAGATACTCCTCTGCCACCAAACATTCCTTaGTCACCTCCTCTTCCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: RRLHLLKPVKHGLSDTPLPPNIP*SPPLPG Trigger: TCCTGGAAGAGGAGGTGACCAAGGAATGTTTGGTGG...CAGAGGAGTATCTGAGAGCCCATGTTTTACTGGTTTCAATAAATGCAGTCGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR CCA 90 bp | TTGAAACCAGTAAAACATGGGCTCTCAGATACTCCTCTGGGCAGGCACTACCCTTCCACAGATATGATATaGCCCTCAGTTGTAAACATG | + |
|
Preference number: 2 (lower is better) Translates to: LKPVKHGLSDTPLGRHYPSTDMI*PSVVNM Trigger: CATGTTTACAACTGAGGGCCATATCATATCTGTGGA...AGGGTAGTGCCTGCCCAGAGGAGTATCTGAGAGCCCATGTTTTACTGGTTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204804.3 |
||
| 3UTR-3UTR TCA 90 bp | AGTTACCCTGTCACAGTATTTAGAGCAGCTAAGGCAAGCCTGTTGGTTGTAGAAAGATTCAACCAGAGGTaGGTAAGAGCTGGACAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: SYPVTVFRAAKASLLVVERFNQR*VRAGQK Trigger: TTTCTGTCCAGCTCTTACTCACCTCTGGTTGAATCT...TTCTACAACCAACAGGCTTGCCTTAGCTGCTCTAAATACTGTGACAGGGTAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR TCA 90 bp | CCAGACACAGATCACCATTCCAAGAGCACAGGAGCAAGAAGCAACCCAAGCTTAGTTCTTCAGGTAAGGTaGTGCTCAAAATATATGCTA | + |
|
Preference number: 2 (lower is better) Translates to: PDTDHHSKSTGARSNPSLVLQVR*CSKYML Trigger: TAGCATATATTTTGAGCATCACCTTACCTGAAGAAC...TAAGCTTGGGTTGCTTCTTGCTCCTGTGCTCTTGGAATGGTGATCTGTGTCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR TCA 90 bp | TTGAAACCAGTAAAACATGGGCTCTCAGATACTCCTCTGGGCAGGCACTACCCTGATGATAGTTACTACTaGAACCCCCTTTCTAAACAT | + |
|
Preference number: 2 (lower is better) Translates to: LKPVKHGLSDTPLGRHYPDDSYY*NPLSKH Trigger: ATGTTTAGAAAGGGGGTTTCAGTAGTAACTATCATC...AGGGTAGTGCCTGCCCAGAGGAGTATCTGAGAGCCCATGTTTTACTGGTTTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR GCA 90 bp | CCCACAAATCACTGGCTTTGGTCTCAGCAGTCTAGAAACTCAATGGTAAGATTTTGCAAACTTCCCATGTaGAGAGCTTCCCATTTCACC | + |
|
Preference number: 2 (lower is better) Translates to: PTNHWLWSQQSRNSMVRFCKLPM*RASHFT Trigger: GGTGAAATGGGAAGCTCTGCACATGGGAAGTTTGCA...AAATCTTACCATTGAGTTTCTAGACTGCTGAGACCAAAGCCAGTGATTTGTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR GCA 90 bp | CAGTGTTCTTCATCTAGCCCCACAAATCACTGGCTTTGGTCTCAGCAGTCTAGATTTAGGAACAGTTTGTaGAAACTTCCCATGTGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: QCSSSSPTNHWLWSQQSRFRNSL*KLPMCR Trigger: TCTGCACATGGGAAGTTTGCACAAACTGTTCCTAAA...TCTAGACTGCTGAGACCAAAGCCAGTGATTTGTGGGGCTAGATGAAGAACACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR GCA 90 bp | CTTTATATGTCTGGCAGTAGACAGTGTTCTTCATCTAGCCCCACAAATCACTGGACACACACAGGCCTGTaGATGCATGTGGTTAATACT | + |
|
Preference number: 2 (lower is better) Translates to: LYMSGSRQCSSSSPTNHWTHTGL*MHVVNT Trigger: AGTATTAACCACATGCATGCACAGGCCTGTGTGTGT...CCAGTGATTTGTGGGGCTAGATGAAGAACACTGTCTACTGCCAGACATATAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR CCA 90 bp | TACCCTCTGACCAGCACTATGTTTGTCCACATCAAGAGAACAAGATCTCAGAGCCAGAGAGAAAAGGGATaGCGCTTTGATTTCAGTAGT | + |
|
Preference number: 2 (lower is better) Translates to: YPLTSTMFVHIKRTRSQSQREKG*RFDFSS Trigger: ACTACTGAAATCAAAGCGCCATCCCTTTTCTCTCTG...GCTCTGAGATCTTGTTCTCTTGATGTGGACAAACATAGTGCTGGTCAGAGGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR CCA 90 bp | TTGAAACCAGTAAAACATGGGCTCTCAGATACTCCTCTGGGCAGGCACTACCCTTGCCTGTCAGATTTCTaGCTAGACATTACACTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: LKPVKHGLSDTPLGRHYPCLSDF*LDITLK Trigger: TTTTAGTGTAATGTCTAGCCAGAAATCTGACAGGCA...AGGGTAGTGCCTGCCCAGAGGAGTATCTGAGAGCCCATGTTTTACTGGTTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR CAA 90 bp | CCATCTTCAGAGAAGAATTCCTTCCAAGGCAATTCCCGAAGACGTTaGTCCACAGATATGATATGGCCCTCAGTTGTAAACATGTATCTG | + |
|
Preference number: 2 (lower is better) Translates to: PSSEKNSFQGNSRRR*STDMIWPSVVNMYL Trigger: CAGATACATGTTTACAACTGAGGGCCATATCATATCTGTGGACAAACGTCTTCGGGAATTGCCTTGGAAGGAATTCTTCTCTGAAGATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204804.3 |
||
| 3UTR-3UTR GCA 90 bp | CCCACAAATCACTGGCTTTGGTCTCAGCAGTCTAGAAACTCAATGGTAAGATTTCCTTTGCACAGGAATTaGATTCCTGATCCTCTAGCA | + |
|
Preference number: 2 (lower is better) Translates to: PTNHWLWSQQSRNSMVRFPLHRN*IPDPLA Trigger: TGCTAGAGGATCAGGAATGCAATTCCTGTGCAAAGG...AAATCTTACCATTGAGTTTCTAGACTGCTGAGACCAAAGCCAGTGATTTGTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR GCA 90 bp | TTTACCTCTCAGAAGGAGAAGAGCAGTGAAGCAGAGTTTCACAGGTACTTGATAACACACACAGGCCTGTaGATGCATGTGGTTAATACT | + |
|
Preference number: 2 (lower is better) Translates to: FTSQKEKSSEAEFHRYLITHTGL*MHVVNT Trigger: AGTATTAACCACATGCATGCACAGGCCTGTGTGTGT...TATCAAGTACCTGTGAAACTCTGCTTCACTGCTCTTCTCCTTCTGAGAGGTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR CCA 90 bp | CAGTGTTCTTCATCTAGCCCCACAAATCACTGGCTTTGGTCTCAGCAGTCTAGAAGATTTTGGTACACTTaGGTTTGGTTTAAGTTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: QCSSSSPTNHWLWSQQSRRFWYT*VWFKFW Trigger: CCAGAACTTAAACCAAACCCAAGTGTACCAAAATCT...TCTAGACTGCTGAGACCAAAGCCAGTGATTTGTGGGGCTAGATGAAGAACACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR CCA 90 bp | AGTTACCCTGTCACAGTATTTAGAGCAGCTAAGGCAAGCCTGTTGGTTGTAGAAGAAACCAGTAAAACATaGGCTCTCAGATACTCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: SYPVTVFRAAKASLLVVEETSKT*ALRYSS Trigger: AGAGGAGTATCTGAGAGCCCATGTTTTACTGGTTTC...TTCTACAACCAACAGGCTTGCCTTAGCTGCTCTAAATACTGTGACAGGGTAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR TCA 90 bp | CCCACAAATCACTGGCTTTGGTCTCAGCAGTCTAGAAACTCAATGGTAAGATTTAGCCTTGTCAACAGCTaGAAAATCTGGTACCCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: PTNHWLWSQQSRNSMVRFSLVNS*KIWYPK Trigger: TTTTGGGTACCAGATTTTTCAGCTGTTGACAAGGCT...AAATCTTACCATTGAGTTTCTAGACTGCTGAGACCAAAGCCAGTGATTTGTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR GCA 90 bp | TCTGACCAGCACTATGTTTGTCCACATCAAGAGAACAAGATCTCAGAGCTCAGAAGAGAGAAACATTTGTaGATCTCAGCAAGTTTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: SDQHYVCPHQENKISELRREKHL*ISASFP Trigger: GGGAAAACTTGCTGAGATGCACAAATGTTTCTCTCT...TCTGAGCTCTGAGATCTTGTTCTCTTGATGTGGACAAACATAGTGCTGGTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR CAA 90 bp | CAAACTAGTTTTCCAGAATCTTCCTCACATACACCCTGTTCCTTATaGGTCCCATCATATGGCAATATAAAACGAGCTGTCTGTAGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: QTSFPESSSHTPCSL*VPSYGNIKRAVCSS Trigger: ACTGCTACAGACAGCTCGTTTTATATTGCCATATGATGGGACCAATAAGGAACAGGGTGTATGTGAGGAAGATTCTGGAAAACTAGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR GCA 90 bp | AGACGACTGCATTTATTGAAACCAGTAAAACATGGGCTCTCAGATACTCCTCTGCTTAGCTTTAAAGGTTaGCTGTCAGATTTCTGGCTA | + |
|
Preference number: 2 (lower is better) Translates to: RRLHLLKPVKHGLSDTPLLSFKG*LSDFWL Trigger: TAGCCAGAAATCTGACAGGCAACCTTTAAAGCTAAG...CAGAGGAGTATCTGAGAGCCCATGTTTTACTGGTTTCAATAAATGCAGTCGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR GCA 90 bp | CCCACAAATCACTGGCTTTGGTCTCAGCAGTCTAGAAACTCAATGGTAAGATTTACACAGGCCTGTGCATaGATGTGGTTAATACTTTTA | + |
|
Preference number: 2 (lower is better) Translates to: PTNHWLWSQQSRNSMVRFTQACA*MWLILL Trigger: TAAAAGTATTAACCACATGCATGCACAGGCCTGTGT...AAATCTTACCATTGAGTTTCTAGACTGCTGAGACCAAAGCCAGTGATTTGTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR CCA 90 bp | AGACGACTGCATTTATTGAAACCAGTAAAACATGGGCTCTCAGATACTCCTCTGTATCACACAGAGAAATaGCTCAAGGATGTCAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: RRLHLLKPVKHGLSDTPLYHTEK*LKDVRK Trigger: CTTTCTGACATCCTTGAGCCATTTCTCTGTGTGATA...CAGAGGAGTATCTGAGAGCCCATGTTTTACTGGTTTCAATAAATGCAGTCGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR CCA 90 bp | TCTGACCAGCACTATGTTTGTCCACATCAAGAGAACAAGATCTCAGAGCTCAGAATTGGTCCCATCATATaGCAATATAAAACGAGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: SDQHYVCPHQENKISELRIGPII*QYKTSC Trigger: ACAGCTCGTTTTATATTGCCATATGATGGGACCAAT...TCTGAGCTCTGAGATCTTGTTCTCTTGATGTGGACAAACATAGTGCTGGTCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR CCA 90 bp | TCTGACCAGCACTATGTTTGTCCACATCAAGAGAACAAGATCTCAGAGCTCAGACTGGCTATAGGAGAATaGAATGAAATACTCTCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: SDQHYVCPHQENKISELRLAIGE*NEILSS Trigger: ACTTGAGAGTATTTCATTCCATTCTCCTATAGCCAG...TCTGAGCTCTGAGATCTTGTTCTCTTGATGTGGACAAACATAGTGCTGGTCAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR CCA 90 bp | TCTGACCAGCACTATGTTTGTCCACATCAAGAGAACAAGATCTCAGAGCTCAGATTTCAGCACACAGGTTaGAAGGAACAGCAAATATAT | + |
|
Preference number: 2 (lower is better) Translates to: SDQHYVCPHQENKISELRFQHTG*KEQQIY Trigger: ATATATTTGCTGTTCCTTCCAACCTGTGTGCTGAAA...TCTGAGCTCTGAGATCTTGTTCTCTTGATGTGGACAAACATAGTGCTGGTCAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR CCA 90 bp | AGACGACTGCATTTATTGAAACCAGTAAAACATGGGCTCTCAGATACTCCTCTGCTGGGAACACAAGCATaGTTACAAACATCCATGAAA | + |
|
Preference number: 2 (lower is better) Translates to: RRLHLLKPVKHGLSDTPLLGTQA*LQTSMK Trigger: TTTCATGGATGTTTGTAACCATGCTTGTGTTCCCAG...CAGAGGAGTATCTGAGAGCCCATGTTTTACTGGTTTCAATAAATGCAGTCGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR TCA 90 bp | AGACGACTGCATTTATTGAAACCAGTAAAACATGGGCTCTCAGATACTCCTCTGGATGATAGTTACTACTaGAACCCCCTTTCTAAACAT | + |
|
Preference number: 2 (lower is better) Translates to: RRLHLLKPVKHGLSDTPLDDSYY*NPLSKH Trigger: ATGTTTAGAAAGGGGGTTTCAGTAGTAACTATCATC...CAGAGGAGTATCTGAGAGCCCATGTTTTACTGGTTTCAATAAATGCAGTCGTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR TCA 90 bp | AATGGTAAGATTTACAGGCATTATCTTATTTACCCTCAGCCTTGTCAACAGCTGAGCCTTGTCAACAGCTaGAAAATCTGGTACCCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: NGKIYRHYLIYPQPCQQLSLVNS*KIWYPK Trigger: TTTTGGGTACCAGATTTTTCAGCTGTTGACAAGGCT...CAGCTGTTGACAAGGCTGAGGGTAAATAAGATAATGCCTGTAAATCTTACCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR GCA 90 bp | TTTACCTCTCAGAAGGAGAAGAGCAGTGAAGCAGAGTTTCACAGGTACTTGATACTTAATAAAATACATTaGATGTCTGCCTGTACCCCT | + |
|
Preference number: 2 (lower is better) Translates to: FTSQKEKSSEAEFHRYLILNKIH*MSACTP Trigger: AGGGGTACAGGCAGACATGCAATGTATTTTATTAAG...TATCAAGTACCTGTGAAACTCTGCTTCACTGCTCTTCTCCTTCTGAGAGGTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR CCA 90 bp | AATGGTAAGATTTACAGGCATTATCTTATTTACCCTCAGCCTTGTCAACAGCTGTGGTACACTTGGGTTTaGTTTAAGTTCTGGCCACAT | + |
|
Preference number: 2 (lower is better) Translates to: NGKIYRHYLIYPQPCQQLWYTWV*FKFWPH Trigger: ATGTGGCCAGAACTTAAACCAAACCCAAGTGTACCA...CAGCTGTTGACAAGGCTGAGGGTAAATAAGATAATGCCTGTAAATCTTACCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR CAA 90 bp | ATTTACAGATTAAACATGAAGTACCATCTATGGCGGCCAAGCATATaGCACATCACAGAGAGAAACATTTGTGCATCTCAGCAAGTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: IYRLNMKYHLWRPSI*HITERNICASQQVF Trigger: GAAAACTTGCTGAGATGCACAAATGTTTCTCTCTGTGATGTGCAATATGCTTGGCCGCCATAGATGGTACTTCATGTTTAATCTGTAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR CCA 90 bp | CAAAGCAGTGAGTTAGAAATTTTCTACCCATATTTCAGCACACAGGTTGGAAGGTGCCTGTCAGATTTCTaGCTAGACATTACACTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: QSSELEIFYPYFSTQVGRCLSDF*LDITLK Trigger: TTTTAGTGTAATGTCTAGCCAGAAATCTGACAGGCA...CCTTCCAACCTGTGTGCTGAAATATGGGTAGAAAATTTCTAACTCACTGCTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR CCA 90 bp | AAGAAGAATCCAAAGAGGCTAATATCCATTGTGCTTAACAACATCAGCATAGCGAGATTTTGGTACACTTaGGTTTGGTTTAAGTTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: KKNPKRLISIVLNNISIARFWYT*VWFKFW Trigger: CCAGAACTTAAACCAAACCCAAGTGTACCAAAATCT...CGCTATGCTGATGTTGTTAAGCACAATGGATATTAGCCTCTTTGGATTCTTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR CCA 90 bp | CAGATAATCTGCTTAAAGAAAGTTTTCTATACAGTAGACGAGACACTGTGGATACCTCAGAGGAGATTTTaGTACACTTGGGTTTGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: QIICLKKVFYTVDETLWIPQRRF*YTWVWF Trigger: AAACCAAACCCAAGTGTACCAAAATCTCCTCTGAGG...TATCCACAGTGTCTCGTCTACTGTATAGAAAACTTTCTTTAAGCAGATTATCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR CAA 90 bp | GATATGATATGGCCCTCAGTTGTAAACATGTATCTGGTTCCAGATTaGTGTACTGGATTCTCTTCATCAAATAGCAGATACAAGTATTTG | + |
|
Preference number: 2 (lower is better) Translates to: DMIWPSVVNMYLVPD*CTGFSSSNSRYKYL Trigger: CAAATACTTGTATCTGCTATTTGATGAAGAGAATCCAGTACACAAATCTGGAACCAGATACATGTTTACAACTGAGGGCCATATCATATC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204804.3 |
||
| 3UTR TCA 72 bp | AGTAGCGGCCACAAGGCCCACACGCATCACCGGCTCTaGTTCACACGGGGTCCCTGCCTTGCAGGGAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SSGHKAHTHHRL*FTRGPCLAGKR Trigger: CCTCTTCCCTGCAAGGCAGGGACCCCGTGTGAATCAGAGCCGGTGATGCGTGTGGGCCTTGTGGCCGCTACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR GCA 72 bp | AGAAAGGCAAAGATCAGCACCTTCTTCCCAAGTCCCTaGTCGGCCACTCTGCGCGTGCGCCTGAGGTGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: RKAKISTFFPSP*SATLRVRLRWP Trigger: GGGCCACCTCAGGCGCACGCGCAGAGTGGCCGAGCAGGGACTTGGGAAGAAGGTGCTGATCTTTGCCTTTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR CAA 90 bp | CACCTTCTTCCCAAGTCCCTGCTCGGCCACTCTGCGCGTGCGCCTGAGGTGGCCTTCTACCCTTTGCCTTaGGTATTTGGCCTGTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: HLLPKSLLGHSARAPEVAFYPLP*VFGLSQ Trigger: CTGGGACAGGCCAAATACCAAAGGCAAAGGGTAGAA...GGCCACCTCAGGCGCACGCGCAGAGTGGCCGAGCAGGGACTTGGGAAGAAGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR TCA 72 bp | CTGCGCGTGCGCCTGAGGTGGCCCAGCCCTACCCTCTaGCCAGCACTATGTTTGTCCACATCAAGAGAACAA | + |
|
Preference number: 3 (lower is better) Translates to: LRVRLRWPSPTL*PALCLSTSREQ Trigger: TTGTTCTCTTGATGTGGACAAACATAGTGCTGGTCAGAGGGTAGGGCTGGGCCACCTCAGGCGCACGCGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR CAA 90 bp | CACCTTCTTCCCAAGTCCCTGCTCGGCCACTCTGCGCGTGCGCCTGAGGTGGCCTATCTGGTTCCAGATTaGTGTACTGGATTCTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: HLLPKSLLGHSARAPEVAYLVPD*CTGFSS Trigger: TGAAGAGAATCCAGTACACAAATCTGGAACCAGATA...GGCCACCTCAGGCGCACGCGCAGAGTGGCCGAGCAGGGACTTGGGAAGAAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204804.3 |
||
| 3UTR-3UTR CAA 90 bp | CACCTTCTTCCCAAGTCCCTGCTCGGCCACTCTGCGCGTGCGCCTGAGGTGGCCAGATATACATTGCAGTaGCTGACATTCAGAAAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: HLLPKSLLGHSARAPEVARYTLQ*LTFRKQ Trigger: TTGCTTTCTGAATGTCAGCAACTGCAATGTATATCT...GGCCACCTCAGGCGCACGCGCAGAGTGGCCGAGCAGGGACTTGGGAAGAAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR GCA 72 bp | CAGTGCAAGGAGGCCAAGCCAGGGCAGGCCCAGCTCTaGCTTTTAGGAACAGTTTGTGCAAACTTCCCATGT | + |
|
Preference number: 3 (lower is better) Translates to: QCKEAKPGQAQL*LLGTVCANFPC Trigger: ACATGGGAAGTTTGCACAAACTGTTCCTAAAAGGCAGAGCTGGGCCTGCCCTGGCTTGGCCTCCTTGCACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR CAA 90 bp | GGCTCTGATTCACACGGGGTCCCTGCCTTGCAGGGAAGAGGCACTAGAGCAGGTAAAAGGGATGGCGCTTaGATTTCAGTAGTGATGCCA | + |
|
Preference number: 3 (lower is better) Translates to: GSDSHGVPALQGRGTRAGKRDGA*ISVVMP Trigger: TGGCATCACTACTGAAATCAAAGCGCCATCCCTTTT...ACCTGCTCTAGTGCCTCTTCCCTGCAAGGCAGGGACCCCGTGTGAATCAGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR CAA 90 bp | GGCTCTGATTCACACGGGGTCCCTGCCTTGCAGGGAAGAGGCACTAGAGCAGGTAGAGGGATATTTTCCTaGAGAGAGAAGGGAAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: GSDSHGVPALQGRGTRAGRGIFS*REKGRQ Trigger: CTGTCTTCCCTTCTCTCTCAAGGAAAATATCCCTCT...ACCTGCTCTAGTGCCTCTTCCCTGCAAGGCAGGGACCCCGTGTGAATCAGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR TCA 72 bp | AACCCAGTGACAGTGGGCACTGTGCATCCTTGGTTATaGAGCAGGAGGGTGGAAGCTCACAATCCTAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: NPVTVGTVHPWL*SRRVEAHNPRA Trigger: AGCCCTAGGATTGTGAGCTTCCACCCTCCTGCTTCATAACCAAGGATGCACAGTGCCCACTGTCACTGGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR CCA 72 bp | GTAAGAGCTGGACAGAAACTTCGACAGCATCACAGATaGGCAGGCTCCACCGCTTCCACCTCAGAGGAGATT | + |
|
Preference number: 3 (lower is better) Translates to: VRAGQKLRQHHR*AGSTASTSEEI Trigger: AATCTCCTCTGAGGTGGAAGCGGTGGAGCCTGCCCATCTGTGATGCTGTCGAAGTTTCTGTCCAGCTCTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR CCA 72 bp | CCTAGGGCTTTCCTCTCCCTAGAAGGCACCTGGTTCTaGAACCATGGGAGTTCTTCAGGTAAGGTGATGCTC | + |
|
Preference number: 3 (lower is better) Translates to: PRAFLSLEGTWF*NHGSSSGKVML Trigger: GAGCATCACCTTACCTGAAGAACTCCCATGGTTCCAGAACCAGGTGCCTTCTAGGGAGAGGAAAGCCCTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR GCA 72 bp | AGGGCAGGCCCAGCTCTGCCTTTTAGGAACAGTTTGTaGAAACTTCCCATGTGCAGAGCTTCCCATTTCACC | + |
|
Preference number: 3 (lower is better) Translates to: RAGPALPFRNSL*KLPMCRASHFT Trigger: GGTGAAATGGGAAGCTCTGCACATGGGAAGTTTGCACAAACTGTTCCTAAAAGGCAGAGCTGGGCCTGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR CCA 72 bp | GGGCAGGCTCCACCGCTTCCACCTCAGAGGAGATTTTaGTACACTTGGGTTTGGTTTAAGTTCTGGCCACAT | + |
|
Preference number: 3 (lower is better) Translates to: GQAPPLPPQRRF*YTWVWFKFWPH Trigger: ATGTGGCCAGAACTTAAACCAAACCCAAGTGTACCAAAATCTCCTCTGAGGTGGAAGCGGTGGAGCCTGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR CCA 72 bp | CACAATCCTAGGGCTTTCCTCTCCCTAGAAGGCACCTaGTTCTGGAACCATGGGAGTTCTTCAGGTAAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: HNPRAFLSLEGT*FWNHGSSSGKV Trigger: CACCTTACCTGAAGAACTCCCATGGTTCCAGAACCAGGTGCCTTCTAGGGAGAGGAAAGCCCTAGGATTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR CCA 72 bp | AGGAAGAAACTCAAGGGAGGCTCTGGGAAACAAGCCTaGTTTCCACAGCTACCAAAGCAATCCGAAAGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: RKKLKGGSGKQA*FPQLPKQSESH Trigger: GTGGCTTTCGGATTGCTTTGGTAGCTGTGGAAACCAGGCTTGTTTCCCAGAGCCTCCCTTGAGTTTCTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR CCA 72 bp | CCAGTAGAAGAGCAGGAAGAAACTCAAGGGAGGCTCTaGGAAACAAGCCTGGTTTCCACAGCTACCAAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: PVEEQEETQGRL*ETSLVSTATKA Trigger: TGCTTTGGTAGCTGTGGAAACCAGGCTTGTTTCCCAGAGCCTCCCTTGAGTTTCTTCCTGCTCTTCTACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR CAA 90 bp | ACAGAAAGGCAAAGATCAGCACCTTCTTCCCAAGTCCCTGCTCGGCCACTCTGCAGCAGATACAAGTATTaGCAAGTCTCGCTGAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: TERQRSAPSSQVPARPLCSRYKY*QVSLRK Trigger: CTTTCTCAGCGAGACTTGCAAATACTTGTATCTGCT...GCAGAGTGGCCGAGCAGGGACTTGGGAAGAAGGTGCTGATCTTTGCCTTTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204804.3 |
||
| 3UTR CCA 72 bp | GCTACCAAAGCAATCCGAAAGCCACCAAACATTCCTTaGTCACCTCCTCTTCCAGGAGAATGGAGTTACCCT | + |
|
Preference number: 3 (lower is better) Translates to: ATKAIRKPPNIP*SPPLPGEWSYP Trigger: AGGGTAACTCCATTCTCCTGGAAGAGGAGGTGACCAAGGAATGTTTGGTGGCTTTCGGATTGCTTTGGTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR CCA 72 bp | TTTAGAGCAGCTAAGGCAAGCCTGTTGGTTGTAGAATaGGACTCCACCATACCTAACCATAAGACAGCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: FRAAKASLLVVE*DSTIPNHKTAC Trigger: GCAGGCTGTCTTATGGTTAGGTATGGTGGAGTCCCATTCTACAACCAACAGGCTTGCCTTAGCTGCTCTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR CAA 90 bp | GGAACAGAAAGGCAAAGATCAGCACCTTCTTCCCAAGTCCCTGCTCGGCCACTCAGATATACATTGCAGTaGCTGACATTCAGAAAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: GTERQRSAPSSQVPARPLRYTLQ*LTFRKQ Trigger: TTGCTTTCTGAATGTCAGCAACTGCAATGTATATCT...GAGTGGCCGAGCAGGGACTTGGGAAGAAGGTGCTGATCTTTGCCTTTCTGTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCTTGTCAACAGCTGAAAAATCTGGTACCCAAAAGTCAAGAGGGTTTAAGAGCCACCAAACATTCCTaGGTCACCTCCTCTTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: QPCQQLKNLVPKSQEGLRATKHS*VTSSSR Trigger: CCTGGAAGAGGAGGTGACCAAGGAATGTTTGGTGGC...TCTTAAACCCTCTTGACTTTTGGGTACCAGATTTTTCAGCTGTTGACAAGGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR CAA 90 bp | CCAGACACAGATCACCATTCCAAGAGCACAGGAGCAAGAAGCAACCCAAGCTTAATAAACTTCTACCCTTaGCCTTTGGTATTTGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: PDTDHHSKSTGARSNPSLINFYP*PLVFGL Trigger: CAGGCCAAATACCAAAGGCAAAGGGTAGAAGTTTAT...TAAGCTTGGGTTGCTTCTTGCTCCTGTGCTCTTGGAATGGTGATCTGTGTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR TCA 72 bp | ATCCAAAGTGAAGAACTGCAGTGGACACTCATTCACTaGGCTGGTGGGGAGATGCTAAGAGGGATATTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: IQSEELQWTLIH*AGGEMLRGIFS Trigger: GGAAAATATCCCTCTTAGCATCTCCCCACCAGCTCAGTGAATGAGTGTCCACTGCAGTTCTTCACTTTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR TCA 72 bp | TGGTACACTTGGGTTTGGTTTAAGTTCTGGCCACATTaGGGTGAGCAGGTCAAATCAAGCCAACCATCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: WYTWVWFKFWPH*GEQVKSSQPSG Trigger: ACCAGATGGTTGGCTTGATTTGACCTGCTCACCTCAATGTGGCCAGAACTTAAACCAAACCCAAGTGTACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204804.3 |
||
| 3UTR CCA 72 bp | CTACGTAGTTTGCAACTTTTCACATGTTGGCCAAACTaGACACTACTGGCTACTCCTGGGAACACAAGCATG | + |
|
Preference number: 3 (lower is better) Translates to: LRSLQLFTCWPN*TLLATPGNTSM Trigger: CATGCTTGTGTTCCCAGGAGTAGCCAGTAGTGTCCAGTTTGGCCAACATGTGAAAAGTTGCAAACTACGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR CAA 90 bp | AGACGACTGCATTTATTGAAACCAGTAAAACATGGGCTCTCAGATACTCCTCTGTTCTACCCTTTGCCTTaGGTATTTGGCCTGTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: RRLHLLKPVKHGLSDTPLFYPLP*VFGLSQ Trigger: CTGGGACAGGCCAAATACCAAAGGCAAAGGGTAGAA...CAGAGGAGTATCTGAGAGCCCATGTTTTACTGGTTTCAATAAATGCAGTCGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR CAA 90 bp | GGAACACAAGCATGGTTACAAACATCCATGAAATTCTTCTGTTCACATTCCTGGGCTAAGGCAAGCCTGTaGGTTGTAGAATGGGACTCC | + |
|
Preference number: 3 (lower is better) Translates to: GTQAWLQTSMKFFCSHSWAKASL*VVEWDS Trigger: GGAGTCCCATTCTACAACCAACAGGCTTGCCTTAGC...CCAGGAATGTGAACAGAAGAATTTCATGGATGTTTGTAACCATGCTTGTGTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR TCA 72 bp | AAGGGATGGCGCTTTGATTTCAGTAGTGATGCCAAGTaGACTTCAGGACCTTTGCACAGGAATTGCATTCCT | + |
|
Preference number: 3 (lower is better) Translates to: KGWRFDFSSDAK*TSGPLHRNCIP Trigger: AGGAATGCAATTCCTGTGCAAAGGTCCTGAAGTTCACTTGGCATCACTACTGAAATCAAAGCGCCATCCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR CCA 72 bp | TGCAACTTTTCACATGTTGGCCAAACTGGACACTACTaGCTACTCCTGGGAACACAAGCATGGTTACAAACA | + |
|
Preference number: 3 (lower is better) Translates to: CNFSHVGQTGHY*LLLGTQAWLQT Trigger: TGTTTGTAACCATGCTTGTGTTCCCAGGAGTAGCCAGTAGTGTCCAGTTTGGCCAACATGTGAAAAGTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTTATATGTCTGGCAGTAGACAGTGTTCTTCATCTAGCCCCACAAATCACTGGAAAAGGGATGGCGCTTaGATTTCAGTAGTGATGCCA | + |
|
Preference number: 3 (lower is better) Translates to: LYMSGSRQCSSSSPTNHWKRDGA*ISVVMP Trigger: TGGCATCACTACTGAAATCAAAGCGCCATCCCTTTT...CCAGTGATTTGTGGGGCTAGATGAAGAACACTGTCTACTGCCAGACATATAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR GCA 72 bp | ACCATACCTAACCATAAGACAGCCTGCTACGTAGTTTaGAACTTTTCACATGTTGGCCAAACTGGACACTAC | + |
|
Preference number: 3 (lower is better) Translates to: TIPNHKTACYVV*NFSHVGQTGHY Trigger: GTAGTGTCCAGTTTGGCCAACATGTGAAAAGTTGCAAACTACGTAGCAGGCTGTCTTATGGTTAGGTATGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR CCA 72 bp | AGTAGACAGTGTTCTTCATCTAGCCCCACAAATCACTaGCTTTGGTCTCAGCAGTCTAGAAACTCAATGGTA | + |
|
Preference number: 3 (lower is better) Translates to: SRQCSSSSPTNH*LWSQQSRNSMV Trigger: TACCATTGAGTTTCTAGACTGCTGAGACCAAAGCCAGTGATTTGTGGGGCTAGATGAAGAACACTGTCTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR CAA 90 bp | CAGATAATCTGCTTAAAGAAAGTTTTCTATACAGTAGACGAGACACTGTGGATAGGGCACTGTGCATCCTaGGTTATGAAGCAGGAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: QIICLKKVFYTVDETLWIGHCAS*VMKQEG Trigger: ACCCTCCTGCTTCATAACCAAGGATGCACAGTGCCC...TATCCACAGTGTCTCGTCTACTGTATAGAAAACTTTCTTTAAGCAGATTATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR TCA 72 bp | TACTCCTGGGAACACAAGCATGGTTACAAACATCCATaGAATTCTTCTGTTCACATTCCTGGACCAAAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: YSWEHKHGYKHP*NSSVHIPGPKQ Trigger: CTGCTTTGGTCCAGGAATGTGAACAGAAGAATTTCATGGATGTTTGTAACCATGCTTGTGTTCCCAGGAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR GCA 72 bp | CTGCCTTTTAGGAACAGTTTGTGCAAACTTCCCATGTaGAGAGCTTCCCATTTCACCTACAGAACAACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LPFRNSLCKLPM*RASHFTYRTTK Trigger: TTTTGTTGTTCTGTAGGTGAAATGGGAAGCTCTGCACATGGGAAGTTTGCACAAACTGTTCCTAAAAGGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR GCA 72 bp | GCCAAGCATATTGCACATCACAGAGAGAAACATTTGTaGATCTCAGCAAGTTTTCCCAGAGTTTCCAACTCT | + |
|
Preference number: 3 (lower is better) Translates to: AKHIAHHREKHL*ISASFPRVSNS Trigger: AGAGTTGGAAACTCTGGGAAAACTTGCTGAGATGCACAAATGTTTCTCTCTGTGATGTGCAATATGCTTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR CCA 72 bp | CAGTGTTCTTCATCTAGCCCCACAAATCACTGGCTTTaGTCTCAGCAGTCTAGAAACTCAATGGTAAGATTT | + |
|
Preference number: 3 (lower is better) Translates to: QCSSSSPTNHWL*SQQSRNSMVRF Trigger: AAATCTTACCATTGAGTTTCTAGACTGCTGAGACCAAAGCCAGTGATTTGTGGGGCTAGATGAAGAACACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR CAA 90 bp | AGTTACCCTGTCACAGTATTTAGAGCAGCTAAGGCAAGCCTGTTGGTTGTAGAACACACAGAAAAGTATTaGAATGTCATGTGCAGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: SYPVTVFRAAKASLLVVEHTEKY*NVMCRV Trigger: GACTCTGCACATGACATTCAAATACTTTTCTGTGTG...TTCTACAACCAACAGGCTTGCCTTAGCTGCTCTAAATACTGTGACAGGGTAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTACCTCTCAGAAGGAGAAGAGCAGTGAAGCAGAGTTTCACAGGTACTTGATAAGACGACTGCATTTATaGAAACCAGTAAAACATGGG | + |
|
Preference number: 3 (lower is better) Translates to: FTSQKEKSSEAEFHRYLIRRLHL*KPVKHG Trigger: CCCATGTTTTACTGGTTTCAATAAATGCAGTCGTCT...TATCAAGTACCTGTGAAACTCTGCTTCACTGCTCTTCTCCTTCTGAGAGGTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR TCA 72 bp | TTACAATTAGAACTGGAGTTAATGACTCTGAGCTCCTaGGACTTAGGTCTGTGTACAAACTTTTCCTCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: LQLELELMTLSS*DLGLCTNFSSW Trigger: CCAAGAGGAAAAGTTTGTACACAGACCTAAGTCTCAGGAGCTCAGAGTCATTAACTCCAGTTCTAATTGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204804.3 |
||
| 3UTR-3UTR CAA 90 bp | CAGATAATCTGCTTAAAGAAAGTTTTCTATACAGTAGACGAGACACTGTGGATAATAAACTTCTACCCTTaGCCTTTGGTATTTGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: QIICLKKVFYTVDETLWIINFYP*PLVFGL Trigger: CAGGCCAAATACCAAAGGCAAAGGGTAGAAGTTTAT...TATCCACAGTGTCTCGTCTACTGTATAGAAAACTTTCTTTAAGCAGATTATCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR CCA 72 bp | TTTCAACTTAGCTTTAAAGGTTGCCTGTCAGATTTCTaGCTAGACATTACACTAAAACAAGTAACAGTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: FQLSFKGCLSDF*LDITLKQVTVN Trigger: ATTCACTGTTACTTGTTTTAGTGTAATGTCTAGCCAGAAATCTGACAGGCAACCTTTAAAGCTAAGTTGAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR GCA 90 bp | CACCTTCTTCCCAAGTCCCTGCTCGGCCACTCTGCGCGTGCGCCTGAGGTGGCCCCAGGGAAGAAAGCCTaGAGCGAGTCAATCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HLLPKSLLGHSARAPEVAPGKKA*SESIQV Trigger: CACCTGGATTGACTCGCTGCAGGCTTTCTTCCCTGG...GGCCACCTCAGGCGCACGCGCAGAGTGGCCGAGCAGGGACTTGGGAAGAAGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR GCA 90 bp | GGCTCTGATTCACACGGGGTCCCTGCCTTGCAGGGAAGAGGCACTAGAGCAGGTGGGTTGAGCTCGTCCTaGGGAAAGGCGTGCGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: GSDSHGVPALQGRGTRAGGLSSS*GKACAM Trigger: CATGGCGCACGCCTTTCCGCAGGACGAGCTCAACCC...ACCTGCTCTAGTGCCTCTTCCCTGCAAGGCAGGGACCCCGTGTGAATCAGAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR GCA 90 bp | ACAGAAAGGCAAAGATCAGCACCTTCTTCCCAAGTCCCTGCTCGGCCACTCTGCGCTGGTAGAAGCCCATaGTGGGCCCCAGCCCGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TERQRSAPSSQVPARPLCAGRSP*WAPARR Trigger: TCTTCGGGCTGGGGCCCAGCATGGGCTTCTACCAGC...GCAGAGTGGCCGAGCAGGGACTTGGGAAGAAGGTGCTGATCTTTGCCTTTCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR GCA 90 bp | GCATCACAGATGGGCAGGCTCCACCGCTTCCACCTCAGAGGAGATTTTGGTACAGGGTTGAGCTCGTCCTaGGGAAAGGCGTGCGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: ASQMGRLHRFHLRGDFGTGLSSS*GKACAM Trigger: CATGGCGCACGCCTTTCCGCAGGACGAGCTCAACCC...TGTACCAAAATCTCCTCTGAGGTGGAAGCGGTGGAGCCTGCCCATCTGTGATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR CCA 90 bp | CACCATTCCAAGAGCACAGGAGCAAGAAGCAACCCAAGCTTAATCAAGAGCAACGCCAGGTCGCGCATCTaGGCACGCAGCTGCGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: HHSKSTGARSNPSLIKSNARSRI*ARSCGG Trigger: CCCGCCGCAGCTGCGTGCCCAGATGCGCGACCTGGC...GTTGCTCTTGATTAAGCTTGGGTTGCTTCTTGCTCCTGTGCTCTTGGAATGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR TCA 90 bp | GGAACAGAAAGGCAAAGATCAGCACCTTCTTCCCAAGTCCCTGCTCGGCCACTCGCTGGAAGCCGAAGCTaGGCGGAAACCGCTGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GTERQRSAPSSQVPARPLAGSRS*AETAGR Trigger: TCTACCAGCGGTTTCCGCTCAGCTTCGGCTTCCAGC...GAGTGGCCGAGCAGGGACTTGGGAAGAAGGTGCTGATCTTTGCCTTTCTGTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR TCA 90 bp | GATGGGCAGGCTCCACCGCTTCCACCTCAGAGGAGATTTTGGTACACTTGGGTTGGCAGTAGATGGGGTTaGGCTCGTCCTGCGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: DGQAPPLPPQRRFWYTWVGSRWG*ARPAER Trigger: CCTTTCCGCAGGACGAGCTCAACCCCATCTACTGCC...AACCCAAGTGTACCAAAATCTCCTCTGAGGTGGAAGCGGTGGAGCCTGCCCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR GCA 90 bp | TACCCTCTGACCAGCACTATGTTTGTCCACATCAAGAGAACAAGATCTCAGAGCATCTGGGCACGCAGCTaGGGCGGGAAGGCGCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YPLTSTMFVHIKRTRSQSIWARS*GGKAPL Trigger: CAGCGGCGCCTTCCCGCCGCAGCTGCGTGCCCAGAT...GCTCTGAGATCTTGTTCTCTTGATGTGGACAAACATAGTGCTGGTCAGAGGGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR CCA 90 bp | GGCTCTGATTCACACGGGGTCCCTGCCTTGCAGGGAAGAGGCACTAGAGCAGGTGGTAGAGGAGATATGTaGACTCCACTAGCTCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GSDSHGVPALQGRGTRAGGRGDM*TPLALV Trigger: GACCAGAGCTAGTGGAGTCCACATATCTCCTCTACC...ACCTGCTCTAGTGCCTCTTCCCTGCAAGGCAGGGACCCCGTGTGAATCAGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR GCA 90 bp | ACAGAAAGGCAAAGATCAGCACCTTCTTCCCAAGTCCCTGCTCGGCCACTCTGCGCACCCAAGCCACTCTaGTTTCCAACCCAATGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TERQRSAPSSQVPARPLCAPKPL*FPTQWP Trigger: AGGCCATTGGGTTGGAAAGCAGAGTGGCTTGGGTGC...GCAGAGTGGCCGAGCAGGGACTTGGGAAGAAGGTGCTGATCTTTGCCTTTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR GCA 90 bp | GGAACAGAAAGGCAAAGATCAGCACCTTCTTCCCAAGTCCCTGCTCGGCCACTCCCAGGGAAGAAAGCCTaGAGCGAGTCAATCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GTERQRSAPSSQVPARPLPGKKA*SESIQV Trigger: CACCTGGATTGACTCGCTGCAGGCTTTCTTCCCTGG...GAGTGGCCGAGCAGGGACTTGGGAAGAAGGTGCTGATCTTTGCCTTTCTGTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR TCA 90 bp | CCAGACACAGATCACCATTCCAAGAGCACAGGAGCAAGAAGCAACCCAAGCTTAGGCAGTAGATGGGGTTaGGCTCGTCCTGCGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PDTDHHSKSTGARSNPSLGSRWG*ARPAER Trigger: CCTTTCCGCAGGACGAGCTCAACCCCATCTACTGCC...TAAGCTTGGGTTGCTTCTTGCTCCTGTGCTCTTGGAATGGTGATCTGTGTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR GCA 90 bp | ATTTGTTTACCTCTCAGAAGGAGAAGAGCAGTGAAGCAGAGTTTCACAGGTACTATCTGGGCACGCAGCTaGGGCGGGAAGGCGCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ICLPLRRRRAVKQSFTGTIWARS*GGKAPL Trigger: CAGCGGCGCCTTCCCGCCGCAGCTGCGTGCCCAGAT...AGTACCTGTGAAACTCTGCTTCACTGCTCTTCTCCTTCTGAGAGGTAAACAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR GCA 90 bp | AAAGAGGTAGCAAGACTTCAGCACAGCAACGGGGGCAAAGCAAGGAGACTGGGTAACCGGCCCCCGCTGTaGAGGTCTCATTATTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KEVARLQHSNGGKARRLGNRPPL*RSHYCC Trigger: ACAGCAATAATGAGACCTGCACAGCGGGGGCCGGTT...ACCCAGTCTCCTTGCTTTGCCCCCGTTGCTGTGCTGAAGTCTTGCTACCTCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR CCA 90 bp | TCAAGAGCAACAGATGAGAACCCAGATGAGAGAGAACTGCTGGGTGCCAACATAGGTAGAAGCCCATGCTaGGCCCCAGCCCGAAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: SRATDENPDERELLGANIGRSPC*APARRP Trigger: TGGTCTTCGGGCTGGGGCCCAGCATGGGCTTCTACC...TATGTTGGCACCCAGCAGTTCTCTCTCATCTGGGTTCTCATCTGTTGCTCTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR CCA 90 bp | CACCATTCCAAGAGCACAGGAGCAAGAAGCAACCCAAGCTTAATCAAGAGCAACGGGTCCCTCAAGCGCTaGAAGCCGAAGCTGAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: HHSKSTGARSNPSLIKSNGSLKR*KPKLSG Trigger: TCCGCTCAGCTTCGGCTTCCAGCGCTTGAGGGACCC...GTTGCTCTTGATTAAGCTTGGGTTGCTTCTTGCTCCTGTGCTCTTGGAATGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR GCA 90 bp | TCTGACCAGCACTATGTTTGTCCACATCAAGAGAACAAGATCTCAGAGCTCAGAAGCCGAAGACGAACATaGCCCGCGCCAGGTCGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SDQHYVCPHQENKISELRSRRRT*PAPGRA Trigger: TGCGCGACCTGGCGCGGGGCATGTTCGTCTTCGGCT...TCTGAGCTCTGAGATCTTGTTCTCTTGATGTGGACAAACATAGTGCTGGTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR GCA 90 bp | AAAGAGGTAGCAAGACTTCAGCACAGCAACGGGGGCAAAGCAAGGAGACTGGGTTCCCCTATCAGAACCTaGAGTCCAGGGAAGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KEVARLQHSNGGKARRLGSPIRT*SPGKKA Trigger: GGCTTTCTTCCCTGGACTGCAGGTTCTGATAGGGGA...ACCCAGTCTCCTTGCTTTGCCCCCGTTGCTGTGCTGAAGTCTTGCTACCTCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR CCA 90 bp | GATGGGCAGGCTCCACCGCTTCCACCTCAGAGGAGATTTTGGTACACTTGGGTTAGGGGATCCCTGTCTTaGTGTTTTCAAAGGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: DGQAPPLPPQRRFWYTWVRGSLS*CFQRLE Trigger: TTCCAGCCTTTGAAAACACCAAGACAGGGATCCCCT...AACCCAAGTGTACCAAAATCTCCTCTGAGGTGGAAGCGGTGGAGCCTGCCCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR CCA 90 bp | AACAAAACCCACCAGAAGTCTAACCCAGTGACAGTGGGCACTGTGCATCCTTGGAGGCGTGTAGGCAGATaGCATCTTCCACATCCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: NKTHQKSNPVTVGTVHPWRRVGR*HLPHPL Trigger: TAGGGGATGTGGAAGATGCCATCTGCCTACACGCCT...CCAAGGATGCACAGTGCCCACTGTCACTGGGTTAGACTTCTGGTGGGTTTTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR TCA 90 bp | AAAGAGGTAGCAAGACTTCAGCACAGCAACGGGGGCAAAGCAAGGAGACTGGGTATGACTCTGAGCTCCTaGGACTTAGGTCTGTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: KEVARLQHSNGGKARRLGMTLSS*DLGLCT Trigger: TGTACACAGACCTAAGTCTCAGGAGCTCAGAGTCAT...ACCCAGTCTCCTTGCTTTGCCCCCGTTGCTGTGCTGAAGTCTTGCTACCTCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089162.5 |
||
| CDS-3UTR GCA 90 bp | CAGTGTTCTTCATCTAGCCCCACAAATCACTGGCTTTGGTCTCAGCAGTCTAGAAACCGGCCCCCGCTGTaGAGGTCTCATTATTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QCSSSSPTNHWLWSQQSRNRPPL*RSHYCC Trigger: ACAGCAATAATGAGACCTGCACAGCGGGGGCCGGTT...TCTAGACTGCTGAGACCAAAGCCAGTGATTTGTGGGGCTAGATGAAGAACACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR GCA 90 bp | AAAGAGGTAGCAAGACTTCAGCACAGCAACGGGGGCAAAGCAAGGAGACTGGGTATAATCCTGTATCGTTaGTCCGCAAGTTCCAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KEVARLQHSNGGKARRLGIILYR*SASSRG Trigger: CCCTCTGGAACTTGCGGAGCAACGATACAGGATTAT...ACCCAGTCTCCTTGCTTTGCCCCCGTTGCTGTGCTGAAGTCTTGCTACCTCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR GCA 90 bp | CACCATTCCAAGAGCACAGGAGCAAGAAGCAACCCAAGCTTAATCAAGAGCAACGCACCCAAGCCACTCTaGTTTCCAACCCAATGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HHSKSTGARSNPSLIKSNAPKPL*FPTQWP Trigger: AGGCCATTGGGTTGGAAAGCAGAGTGGCTTGGGTGC...GTTGCTCTTGATTAAGCTTGGGTTGCTTCTTGCTCCTGTGCTCTTGGAATGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR GCA 90 bp | GTAAAACATGGGCTCTCAGATACTCCTCTGGGCAGGCACTACCCTCACATGCTTCAGGTGTTCATGAGCTaGCCACTGAACATGTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: VKHGLSDTPLGRHYPHMLQVFMS*PLNMFT Trigger: CGTGAACATGTTCAGTGGGCAGCTCATGAACACCTG...AAGCATGTGAGGGTAGTGCCTGCCCAGAGGAGTATCTGAGAGCCCATGTTTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR GCA 90 bp | ACAGAAAGGCAAAGATCAGCACCTTCTTCCCAAGTCCCTGCTCGGCCACTCTGCGAAGGGATTCTTGGTTaGCTGGTAGAGGAGATATGT | + |
|
Preference number: 4 (lower is better) Translates to: TERQRSAPSSQVPARPLCEGILG*LVEEIC Trigger: ACATATCTCCTCTACCAGGCAACCAAGAATCCCTTC...GCAGAGTGGCCGAGCAGGGACTTGGGAAGAAGGTGCTGATCTTTGCCTTTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR CCA 90 bp | TTTACCTCTCAGAAGGAGAAGAGCAGTGAAGCAGAGTTTCACAGGTACTTGATAGGTAGAAGCCCATGCTaGGCCCCAGCCCGAAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: FTSQKEKSSEAEFHRYLIGRSPC*APARRP Trigger: TGGTCTTCGGGCTGGGGCCCAGCATGGGCTTCTACC...TATCAAGTACCTGTGAAACTCTGCTTCACTGCTCTTCTCCTTCTGAGAGGTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR CCA 90 bp | CAGCCTTGTCAACAGCTGAAAAATCTGGTACCCAAAAGTCAAGAGGGTTTAAGAGGGTCCCTCAAGCGCTaGAAGCCGAAGCTGAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: QPCQQLKNLVPKSQEGLRGSLKR*KPKLSG Trigger: TCCGCTCAGCTTCGGCTTCCAGCGCTTGAGGGACCC...TCTTAAACCCTCTTGACTTTTGGGTACCAGATTTTTCAGCTGTTGACAAGGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR GCA 90 bp | GTAAAACATGGGCTCTCAGATACTCCTCTGGGCAGGCACTACCCTCACATGCTTTCTGGCGCATGTAGATaGTCTTTAAGGGCAAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VKHGLSDTPLGRHYPHMLSGACR*SLRARS Trigger: ACTCCTTGCCCTTAAAGAGCATCTACATGCGCCAGA...AAGCATGTGAGGGTAGTGCCTGCCCAGAGGAGTATCTGAGAGCCCATGTTTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089162.5 |
||
| CDS-3UTR CCA 90 bp | AAATCAAGCCAACCATCTGGTCGATCTGGCGCATGTAGATGCTCTTTAAGGGCAGGTGTTTTCAAAGGCTaGAAGGAGCCGCACAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KSSQPSGRSGACRCSLRAGVFKG*KEPHSQ Trigger: TTGGCTGTGCGGCTCCTTCCAGCCTTTGAAAACACC...TGCCCTTAAAGAGCATCTACATGCGCCAGATCGACCAGATGGTTGGCTTGATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204804.3 |
||
| CDS-3UTR CCA 90 bp | GTAAAACATGGGCTCTCAGATACTCCTCTGGGCAGGCACTACCCTCACATGCTTAGGGGATCCCTGTCTTaGTGTTTTCAAAGGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VKHGLSDTPLGRHYPHMLRGSLS*CFQRLE Trigger: TTCCAGCCTTTGAAAACACCAAGACAGGGATCCCCT...AAGCATGTGAGGGTAGTGCCTGCCCAGAGGAGTATCTGAGAGCCCATGTTTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR CCA 90 bp | TTGAAACCAGTAAAACATGGGCTCTCAGATACTCCTCTGGGCAGGCACTACCCTGGTAGAGGAGATATGTaGACTCCACTAGCTCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LKPVKHGLSDTPLGRHYPGRGDM*TPLALV Trigger: GACCAGAGCTAGTGGAGTCCACATATCTCCTCTACC...AGGGTAGTGCCTGCCCAGAGGAGTATCTGAGAGCCCATGTTTTACTGGTTTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR CAA 72 bp | AGCTACCAAAGCAATCCGAAAGCCACCAAACATTCCTaGGTCACCTCCTCTTCCAGGAGAATGGAGTTACCC | + |
|
Preference number: 4 (lower is better) Translates to: SYQSNPKATKHS*VTSSSRRMELP Trigger: GGGTAACTCCATTCTCCTGGAAGAGGAGGTGACCAAGGAATGTTTGGTGGCTTTCGGATTGCTTTGGTAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR TCA 90 bp | GGAACACAAGCATGGTTACAAACATCCATGAAATTCTTCTGTTCACATTCCTGGGCTGGAAGCCGAAGCTaGGCGGAAACCGCTGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GTQAWLQTSMKFFCSHSWAGSRS*AETAGR Trigger: TCTACCAGCGGTTTCCGCTCAGCTTCGGCTTCCAGC...CCAGGAATGTGAACAGAAGAATTTCATGGATGTTTGTAACCATGCTTGTGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR TCA 90 bp | AAAGAGGTAGCAAGACTTCAGCACAGCAACGGGGGCAAAGCAAGGAGACTGGGTCTTCTGGAACTCGGATaGATTTCCCATTATTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KEVARLQHSNGGKARRLGLLELG*ISHYCQ Trigger: TTGGCAATAATGGGAAATTCATCCGAGTTCCAGAAG...ACCCAGTCTCCTTGCTTTGCCCCCGTTGCTGTGCTGAAGTCTTGCTACCTCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR GCA 90 bp | CAAGAACACCAGGTACATACATGGTGCACAAACATACATGCAGATAAAACATTCGCTGGTAGAAGCCCATaGTGGGCCCCAGCCCGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QEHQVHTWCTNIHADKTFAGRSP*WAPARR Trigger: TCTTCGGGCTGGGGCCCAGCATGGGCTTCTACCAGC...GAATGTTTTATCTGCATGTATGTTTGTGCACCATGTATGTACCTGGTGTTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204804.3 |
||
| CDS-3UTR CCA 90 bp | AAACGAGCTGTCTGTAGCAGTGGTTGTGACAGCCCATGGCCCAAACAAAACCCAAACTTGACTGCCTTCTaGAACTCGGATGAATTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KRAVCSSGCDSPWPKQNPNLTAF*NSDEFP Trigger: GGGAAATTCATCCGAGTTCCAGAAGGCAGTCAAGTT...TGGGTTTTGTTTGGGCCATGGGCTGTCACAACCACTGCTACAGACAGCTCGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR CCA 90 bp | CAGTGTTCTTCATCTAGCCCCACAAATCACTGGCTTTGGTCTCAGCAGTCTAGACTTTCACAGCTCGTCTaGCAACCCACTCAAAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QCSSSSPTNHWLWSQQSRLSQLV*QPTQKW Trigger: CCACTTTTGAGTGGGTTGCCAGACGAGCTGTGAAAG...TCTAGACTGCTGAGACCAAAGCCAGTGATTTGTGGGGCTAGATGAAGAACACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR CCA 90 bp | CCAGACACAGATCACCATTCCAAGAGCACAGGAGCAAGAAGCAACCCAAGCTTATGCTTTCCAACCCAATaGCCTGTCTGGATGTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: PDTDHHSKSTGARSNPSLCFPTQ*PVWMFT Trigger: TGTGAACATCCAGACAGGCCATTGGGTTGGAAAGCA...TAAGCTTGGGTTGCTTCTTGCTCCTGTGCTCTTGGAATGGTGATCTGTGTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR CCA 90 bp | GATGGGCAGGCTCCACCGCTTCCACCTCAGAGGAGATTTTGGTACACTTGGGTTTCCACAGATATGATATaGCCCTCAGTTGTAAACATG | + |
|
Preference number: 4 (lower is better) Translates to: DGQAPPLPPQRRFWYTWVSTDMI*PSVVNM Trigger: CATGTTTACAACTGAGGGCCATATCATATCTGTGGA...AACCCAAGTGTACCAAAATCTCCTCTGAGGTGGAAGCGGTGGAGCCTGCCCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089162.5 |
||
| CDS-3UTR GCA 90 bp | TCAAGAGCAACAGATGAGAACCCAGATGAGAGAGAACTGCTGGGTGCCAACATATGCAGGTCTCATTATTaGTGTCAGGAGGAACACCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRATDENPDERELLGANICRSHY*CQEEHL Trigger: CAGGTGTTCCTCCTGACAGCAATAATGAGACCTGCA...TATGTTGGCACCCAGCAGTTCTCTCTCATCTGGGTTCTCATCTGTTGCTCTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR CCA 90 bp | AGTTACCCTGTCACAGTATTTAGAGCAGCTAAGGCAAGCCTGTTGGTTGTAGAAGGTGTTTTCAAAGGCTaGAAGGAGCCGCACAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SYPVTVFRAAKASLLVVEGVFKG*KEPHSQ Trigger: TTGGCTGTGCGGCTCCTTCCAGCCTTTGAAAACACC...TTCTACAACCAACAGGCTTGCCTTAGCTGCTCTAAATACTGTGACAGGGTAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR CCA 90 bp | CCCACAAATCACTGGCTTTGGTCTCAGCAGTCTAGAAACTCAATGGTAAGATTTCAACCCACTCAAAAGTaGAATCCCCCAGCAGTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: PTNHWLWSQQSRNSMVRFQPTQK*NPPAVG Trigger: GCCGACTGCTGGGGGATTCCACTTTTGAGTGGGTTG...AAATCTTACCATTGAGTTTCTAGACTGCTGAGACCAAAGCCAGTGATTTGTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR GCA 90 bp | CATCTTCAGAGAAGAATTCCTTCCAAGGCAATTCCCGAAGACGTTTGTCCACAGTGCAGGTCTCATTATTaGTGTCAGGAGGAACACCTG | + |
|
Preference number: 4 (lower is better) Translates to: HLQRRIPSKAIPEDVCPQCRSHY*CQEEHL Trigger: CAGGTGTTCCTCCTGACAGCAATAATGAGACCTGCA...CTGTGGACAAACGTCTTCGGGAATTGCCTTGGAAGGAATTCTTCTCTGAAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204804.3 |
||
| CDS-3UTR CCA 90 bp | AGTTACCCTGTCACAGTATTTAGAGCAGCTAAGGCAAGCCTGTTGGTTGTAGAACTTTCACAGCTCGTCTaGCAACCCACTCAAAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SYPVTVFRAAKASLLVVELSQLV*QPTQKW Trigger: CCACTTTTGAGTGGGTTGCCAGACGAGCTGTGAAAG...TTCTACAACCAACAGGCTTGCCTTAGCTGCTCTAAATACTGTGACAGGGTAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR CCA 90 bp | CTTTATATGTCTGGCAGTAGACAGTGTTCTTCATCTAGCCCCACAAATCACTGGGTTGACGTAGAGCGGTaGGTCTCCTTCTCCTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: LYMSGSRQCSSSSPTNHWVDVER*VSFSFI Trigger: AATGAAGGAGAAGGAGACCCACCGCTCTACGTCAAC...CCAGTGATTTGTGGGGCTAGATGAAGAACACTGTCTACTGCCAGACATATAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR CAA 72 bp | CCTGTCACAGTATTTAGAGCAGCTAAGGCAAGCCTGTaGGTTGTAGAATGGGACTCCACCATACCTAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: PVTVFRAAKASL*VVEWDSTIPNH Trigger: ATGGTTAGGTATGGTGGAGTCCCATTCTACAACCAACAGGCTTGCCTTAGCTGCTCTAAATACTGTGACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR GCA 90 bp | CTTTATATGTCTGGCAGTAGACAGTGTTCTTCATCTAGCCCCACAAATCACTGGATAATCCTGTATCGTTaGTCCGCAAGTTCCAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LYMSGSRQCSSSSPTNHWIILYR*SASSRG Trigger: CCCTCTGGAACTTGCGGAGCAACGATACAGGATTAT...CCAGTGATTTGTGGGGCTAGATGAAGAACACTGTCTACTGCCAGACATATAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR CCA 90 bp | CTCGCTGAGAAAGAAGCTTTCCATCCGGTCTTCTTTAGACTTGTCTATGACGTGAACTTGACTGCCTTCTaGAACTCGGATGAATTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LAEKEAFHPVFFRLVYDVNLTAF*NSDEFP Trigger: GGGAAATTCATCCGAGTTCCAGAAGGCAGTCAAGTT...CACGTCATAGACAAGTCTAAAGAAGACCGGATGGAAAGCTTCTTTCTCAGCGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204804.3 |
||
| CDS-3UTR CCA 90 bp | GCCTTGTCAACAGCTGAAAAATCTGGTACCCAAAAGTCAAGAGGGTTTAAGACTGTTGACGTAGAGCGGTaGGTCTCCTTCTCCTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: ALSTAEKSGTQKSRGFKTVDVER*VSFSFI Trigger: AATGAAGGAGAAGGAGACCCACCGCTCTACGTCAAC...AGTCTTAAACCCTCTTGACTTTTGGGTACCAGATTTTTCAGCTGTTGACAAGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR CAA 72 bp | CCTAATGATCCCATCAGAGAGAAAAGGGATGGCGCTTaGATTTCAGTAGTGATGCCAAGTGAACTTCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PNDPIREKRDGA*ISVVMPSELQD Trigger: GTCCTGAAGTTCACTTGGCATCACTACTGAAATCAAAGCGCCATCCCTTTTCTCTCTGATGGGATCATTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR GCA 90 bp | GGAACACAAGCATGGTTACAAACATCCATGAAATTCTTCTGTTCACATTCCTGGCAGGTGTTCATGAGCTaGCCACTGAACATGTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: GTQAWLQTSMKFFCSHSWQVFMS*PLNMFT Trigger: CGTGAACATGTTCAGTGGGCAGCTCATGAACACCTG...CCAGGAATGTGAACAGAAGAATTTCATGGATGTTTGTAACCATGCTTGTGTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR CCA 90 bp | CTCAATGGTAAGATTTACAGGCATTATCTTATTTACCCTCAGCCTTGTCAACAGAGGCGTGTAGGCAGATaGCATCTTCCACATCCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LNGKIYRHYLIYPQPCQQRRVGR*HLPHPL Trigger: TAGGGGATGTGGAAGATGCCATCTGCCTACACGCCT...CTGTTGACAAGGCTGAGGGTAAATAAGATAATGCCTGTAAATCTTACCATTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR CCA 90 bp | AGACGACTGCATTTATTGAAACCAGTAAAACATGGGCTCTCAGATACTCCTCTGGGTAGAAGGGATTCTTaGTTGCCTGGTAGAGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RRLHLLKPVKHGLSDTPLGRRDS*LPGRGD Trigger: ATCTCCTCTACCAGGCAACCAAGAATCCCTTCTACC...CAGAGGAGTATCTGAGAGCCCATGTTTTACTGGTTTCAATAAATGCAGTCGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR CAA 72 bp | GAGAAGAATTCCTTCCAAGGCAATTCCCGAAGACGTTaGTCCACAGATATGATATGGCCCTCAGTTGTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: EKNSFQGNSRRR*STDMIWPSVVN Trigger: GTTTACAACTGAGGGCCATATCATATCTGTGGACAAACGTCTTCGGGAATTGCCTTGGAAGGAATTCTTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204804.3 |
||
| CDS-3UTR CCA 90 bp | TACCCTCTGACCAGCACTATGTTTGTCCACATCAAGAGAACAAGATCTCAGAGCCGAAGACCTGGACTGTaGAATCTTTGTCAAATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: YPLTSTMFVHIKRTRSQSRRPGL*NLCQMK Trigger: TTTCATTTGACAAAGATTCCACAGTCCAGGTCTTCG...GCTCTGAGATCTTGTTCTCTTGATGTGGACAAACATAGTGCTGGTCAGAGGGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR CCA 90 bp | CACCATTCCAAGAGCACAGGAGCAAGAAGCAACCCAAGCTTAATCAAGAGCAACCACCAAAGGGCTGTTTaGAATCAGTTATTATTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HHSKSTGARSNPSLIKSNHQRAV*NQLLFC Trigger: ACAGAATAATAACTGATTCCAAACAGCCCTTTGGTG...GTTGCTCTTGATTAAGCTTGGGTTGCTTCTTGCTCCTGTGCTCTTGGAATGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR CCA 90 bp | CAGATAATCTGCTTAAAGAAAGTTTTCTATACAGTAGACGAGACACTGTGGATACAACCCACTCAAAAGTaGAATCCCCCAGCAGTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: QIICLKKVFYTVDETLWIQPTQK*NPPAVG Trigger: GCCGACTGCTGGGGGATTCCACTTTTGAGTGGGTTG...TATCCACAGTGTCTCGTCTACTGTATAGAAAACTTTCTTTAAGCAGATTATCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR CCA 90 bp | GGAACACAAGCATGGTTACAAACATCCATGAAATTCTTCTGTTCACATTCCTGGACCCAATGGCCTGTCTaGATGTTCACAACATTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GTQAWLQTSMKFFCSHSWTQWPV*MFTTLP Trigger: AGGCAATGTTGTGAACATCCAGACAGGCCATTGGGT...CCAGGAATGTGAACAGAAGAATTTCATGGATGTTTGTAACCATGCTTGTGTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR CCA 90 bp | GGAACACAAGCATGGTTACAAACATCCATGAAATTCTTCTGTTCACATTCCTGGGGTAGAAGGGATTCTTaGTTGCCTGGTAGAGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GTQAWLQTSMKFFCSHSWGRRDS*LPGRGD Trigger: ATCTCCTCTACCAGGCAACCAAGAATCCCTTCTACC...CCAGGAATGTGAACAGAAGAATTTCATGGATGTTTGTAACCATGCTTGTGTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR CCA 90 bp | TCTGACCAGCACTATGTTTGTCCACATCAAGAGAACAAGATCTCAGAGCTCAGACGAAGACCTGGACTGTaGAATCTTTGTCAAATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SDQHYVCPHQENKISELRRRPGL*NLCQMK Trigger: TTTCATTTGACAAAGATTCCACAGTCCAGGTCTTCG...TCTGAGCTCTGAGATCTTGTTCTCTTGATGTGGACAAACATAGTGCTGGTCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR CCA 90 bp | AATGGTAAGATTTACAGGCATTATCTTATTTACCCTCAGCCTTGTCAACAGCTGACCCAATGGCCTGTCTaGATGTTCACAACATTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NGKIYRHYLIYPQPCQQLTQWPV*MFTTLP Trigger: AGGCAATGTTGTGAACATCCAGACAGGCCATTGGGT...CAGCTGTTGACAAGGCTGAGGGTAAATAAGATAATGCCTGTAAATCTTACCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR CCA 90 bp | CTCAATGGTAAGATTTACAGGCATTATCTTATTTACCCTCAGCCTTGTCAACAGTGCTTTCCAACCCAATaGCCTGTCTGGATGTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: LNGKIYRHYLIYPQPCQQCFPTQ*PVWMFT Trigger: TGTGAACATCCAGACAGGCCATTGGGTTGGAAAGCA...CTGTTGACAAGGCTGAGGGTAAATAAGATAATGCCTGTAAATCTTACCATTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR CAA 72 bp | TTTCCAGAATCTTCCTCACATACACCCTGTTCCTTATaGGTCCCATCATATGGCAATATAAAACGAGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FPESSSHTPCSL*VPSYGNIKRAV Trigger: GACAGCTCGTTTTATATTGCCATATGATGGGACCAATAAGGAACAGGGTGTATGTGAGGAAGATTCTGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR GCA 90 bp | TCTGACCAGCACTATGTTTGTCCACATCAAGAGAACAAGATCTCAGAGCTCAGATATTTTTCAAGACTCTaGAGAATGTCCATTCCTACA | + |
|
Preference number: 4 (lower is better) Translates to: SDQHYVCPHQENKISELRYFSRL*RMSIPT Trigger: TGTAGGAATGGACATTCTGCAGAGTCTTGAAAAATA...TCTGAGCTCTGAGATCTTGTTCTCTTGATGTGGACAAACATAGTGCTGGTCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR CAA 72 bp | AAGGAGAAGAGCAGTGAAGCAGAGTTTCACAGGTACTaGATAGCTTTAGGATATTCACATCCAAACTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KEKSSEAEFHRY*IALGYSHPNSR Trigger: TCTTGAGTTTGGATGTGAATATCCTAAAGCTATCAAGTACCTGTGAAACTCTGCTTCACTGCTCTTCTCCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR CAA 72 bp | TGGCCCTCAGTTGTAAACATGTATCTGGTTCCAGATTaGTGTACTGGATTCTCTTCATCAAATAGCAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: WPSVVNMYLVPD*CTGFSSSNSRY Trigger: GTATCTGCTATTTGATGAAGAGAATCCAGTACACAAATCTGGAACCAGATACATGTTTACAACTGAGGGCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204804.3 |
||
| CDS-3UTR GCA 90 bp | CAGATAATCTGCTTAAAGAAAGTTTTCTATACAGTAGACGAGACACTGTGGATAGAAGGGATTCTTGGTTaGCTGGTAGAGGAGATATGT | + |
|
Preference number: 4 (lower is better) Translates to: QIICLKKVFYTVDETLWIEGILG*LVEEIC Trigger: ACATATCTCCTCTACCAGGCAACCAAGAATCCCTTC...TATCCACAGTGTCTCGTCTACTGTATAGAAAACTTTCTTTAAGCAGATTATCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| 3UTR CAA 72 bp | CCTCACATGCTTTCACTTCAACACACAGAAAAGTATTaGAATGTCATGTGCAGAGTCTACAATCCAAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: PHMLSLQHTEKY*NVMCRVYNPRQ Trigger: TTGTCTTGGATTGTAGACTCTGCACATGACATTCAAATACTTTTCTGTGTGTTGAAGTGAAAGCATGTGAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR GCA 90 bp | CAAAGCAGTGAGTTAGAAATTTTCTACCCATATTTCAGCACACAGGTTGGAAGGTATTTTTCAAGACTCTaGAGAATGTCCATTCCTACA | + |
|
Preference number: 4 (lower is better) Translates to: QSSELEIFYPYFSTQVGRYFSRL*RMSIPT Trigger: TGTAGGAATGGACATTCTGCAGAGTCTTGAAAAATA...CCTTCCAACCTGTGTGCTGAAATATGGGTAGAAAATTTCTAACTCACTGCTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR CCA 90 bp | CAGATAATCTGCTTAAAGAAAGTTTTCTATACAGTAGACGAGACACTGTGGATACACCAAAGGGCTGTTTaGAATCAGTTATTATTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QIICLKKVFYTVDETLWIHQRAV*NQLLFC Trigger: ACAGAATAATAACTGATTCCAAACAGCCCTTTGGTG...TATCCACAGTGTCTCGTCTACTGTATAGAAAACTTTCTTTAAGCAGATTATCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS CCA 90 bp | GCGCCTTGGCCGATGAAGCCAGGCCGGGCCTCCGGGCGGACCAACTaGCCCCGAGCCGTCGGGGTCCCTCAAGCGCTGGAAGCCGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: APWPMKPGRASGRTN*PRAVGVPQALEAEA Trigger: AGCTTCGGCTTCCAGCGCTTGAGGGACCCCGACGGCTCGGGGCCAGTTGGTCCGCCCGGAGGCCCGGCCTGGCTTCATCGGCCAAGGCGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS GCA 90 bp | GCGGAAAGGCGTGCGCCATGTAGTTGTCATAGCCGAAGACGAACATaGCCCGCGCCAGGTCGCGCATCTGGGCACGCAGCTGCGGCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: AERRAPCSCHSRRRT*PAPGRASGHAAAAG Trigger: TCCCGCCGCAGCTGCGTGCCCAGATGCGCGACCTGGCGCGGGGCATGTTCGTCTTCGGCTATGACAACTACATGGCGCACGCCTTTCCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS TCA 90 bp | AAGGGTCTCCGCGGTCAGGCCCCCGGCCGCGGCAGTAGATGGGGTTaGGCTCGTCCTGCGGAAAGGCGTGCGCCATGTAGTTGTCATAGC | + |
|
Preference number: 5 (lower is better) Translates to: KGLRGQAPGRGSRWG*ARPAERRAPCSCHS Trigger: GCTATGACAACTACATGGCGCACGCCTTTCCGCAGGACGAGCTCAACCCCATCTACTGCCGCGGCCGGGGGCCTGACCGCGGAGACCCTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS CCA 90 bp | GTTGCCAGTTATAGCGCTCAGGGAGGGCCCCGTACCGCTTCCATATaGCATAGTAGAAGGCGTGTAGGCAGATGGCATCTTCCACATCCC | + |
|
Preference number: 5 (lower is better) Translates to: VASYSAQGGPRTASI*HSRRRVGRWHLPHP Trigger: GGGATGTGGAAGATGCCATCTGCCTACACGCCTTCTACTATGCCATATGGAAGCGGTACGGGGCCCTCCCTGAGCGCTATAACTGGCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| CDS-3UTR CAA 90 bp | GGAACAGAAAGGCAAAGATCAGCACCTTCTTCCCAAGTCCCTGCTCGGCCACTCATCAGGGGCCTGGAGTaGCCAGTTATAGCGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GTERQRSAPSSQVPARPLIRGLE*PVIALR Trigger: CCTGAGCGCTATAACTGGCAACTCCAGGCCCCTGAT...GAGTGGCCGAGCAGGGACTTGGGAAGAAGGTGCTGATCTTTGCCTTTCTGTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| CDS GCA 90 bp | ATTCCACCAGGAGAGAACCGGCCCCCGCTGTGCAGGTCTCATTATTaGTGTCAGGAGGAACACCTGTCTTCAGATTCACCCGAGGATAGG | + |
|
Preference number: 5 (lower is better) Translates to: IPPGENRPPLCRSHY*CQEEHLSSDSPEDR Trigger: CCTATCCTCGGGTGAATCTGAAGACAGGTGTTCCTCCTGACAGCAATAATGAGACCTGCACAGCGGGGGCCGGTTCTCTCCTGGTGGAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS CCA 90 bp | CTGTATCGTTGCTCCGCAAGTTCCAGAGGGCTTTCACAGCTCGTCTaGCAACCCACTCAAAAGTGGAATCCCCCAGCAGTCGGCTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LYRCSASSRGLSQLV*QPTQKWNPPAVGSE Trigger: TTCTGAGCCGACTGCTGGGGGATTCCACTTTTGAGTGGGTTGCCAGACGAGCTGTGAAAGCCCTCTGGAACTTGCGGAGCAACGATACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS CCA 90 bp | GAACACCTGTCTTCAGATTCACCCGAGGATAGGGGATCCCTGTCTTaGTGTTTTCAAAGGCTGGAAGGAGCCGCACAGCCAAGTCATGGG | + |
|
Preference number: 5 (lower is better) Translates to: EHLSSDSPEDRGSLS*CFQRLEGAAQPSHG Trigger: CCCATGACTTGGCTGTGCGGCTCCTTCCAGCCTTTGAAAACACCAAGACAGGGATCCCCTATCCTCGGGTGAATCTGAAGACAGGTGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS CCA 90 bp | CCCCGTACCGCTTCCATATGGCATAGTAGAAGGCGTGTAGGCAGATaGCATCTTCCACATCCCCTATCAGAACCTGCAGTCCAGGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: PRTASIWHSRRRVGR*HLPHPLSEPAVQGR Trigger: TCTTCCCTGGACTGCAGGTTCTGATAGGGGATGTGGAAGATGCCATCTGCCTACACGCCTTCTACTATGCCATATGGAAGCGGTACGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR CAA 90 bp | AACAAAACCCACCAGAAGTCTAACCCAGTGACAGTGGGCACTGTGCATCCTTGGATCAGGGGCCTGGAGTaGCCAGTTATAGCGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NKTHQKSNPVTVGTVHPWIRGLE*PVIALR Trigger: CCTGAGCGCTATAACTGGCAACTCCAGGCCCCTGAT...CCAAGGATGCACAGTGCCCACTGTCACTGGGTTAGACTTCTGGTGGGTTTTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| CDS-3UTR CAA 90 bp | GTACCCCTGAGACCCACTGGTAGCACTCAAGGCACCATGGTACTTCCAGACACAGTGCAGGTCTCATTATaGCTGTCAGGAGGAACACCT | + |
|
Preference number: 5 (lower is better) Translates to: VPLRPTGSTQGTMVLPDTVQVSL*LSGGTP Trigger: AGGTGTTCCTCCTGACAGCAATAATGAGACCTGCAC...TGTGTCTGGAAGTACCATGGTGCCTTGAGTGCTACCAGTGGGTCTCAGGGGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS GCA 90 bp | GGCCTGTCTGGATGTTCACAACATTGCCTAATAATCCTGTATCGTTaGTCCGCAAGTTCCAGAGGGCTTTCACAGCTCGTCTGGCAACCC | + |
|
Preference number: 5 (lower is better) Translates to: GLSGCSQHCLIILYR*SASSRGLSQLVWQP Trigger: GGGTTGCCAGACGAGCTGTGAAAGCCCTCTGGAACTTGCGGAGCAACGATACAGGATTATTAGGCAATGTTGTGAACATCCAGACAGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS CCA 90 bp | ATTCACCCGAGGATAGGGGATCCCTGTCTTGGTGTTTTCAAAGGCTaGAAGGAGCCGCACAGCCAAGTCATGGGCCATGTACAACAATTC | + |
|
Preference number: 5 (lower is better) Translates to: IHPRIGDPCLGVFKG*KEPHSQVMGHVQQF Trigger: GAATTGTTGTACATGGCCCATGACTTGGCTGTGCGGCTCCTTCCAGCCTTTGAAAACACCAAGACAGGGATCCCCTATCCTCGGGTGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS CCA 90 bp | AGCCCAGCACCCAAGCCACTCTGCTTTCCAACCCAATGGCCTGTCTaGATGTTCACAACATTGCCTAATAATCCTGTATCGTTGCTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SPAPKPLCFPTQWPV*MFTTLPNNPVSLLR Trigger: GCGGAGCAACGATACAGGATTATTAGGCAATGTTGTGAACATCCAGACAGGCCATTGGGTTGGAAAGCAGAGTGGCTTGGGTGCTGGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR CAA 90 bp | GTACCCCTGAGACCCACTGGTAGCACTCAAGGCACCATGGTACTTCCAGACACAAATAATCCTGTATCGTaGCTCCGCAAGTTCCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VPLRPTGSTQGTMVLPDTNNPVS*LRKFQR Trigger: CCTCTGGAACTTGCGGAGCAACGATACAGGATTATT...TGTGTCTGGAAGTACCATGGTGCCTTGAGTGCTACCAGTGGGTCTCAGGGGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR CAA 90 bp | GAAACCAGTAAAACATGGGCTCTCAGATACTCCTCTGGGCAGGCACTACCCTCATCATTGATGTTCAGATaGGAAGGGTCTCCGCGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ETSKTWALRYSSGQALPSSLMFR*EGSPRS Trigger: TGACCGCGGAGACCCTTCCAATCTGAACATCAATGA...TGAGGGTAGTGCCTGCCCAGAGGAGTATCTGAGAGCCCATGTTTTACTGGTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR CAA 90 bp | ACAGAAAGGCAAAGATCAGCACCTTCTTCCCAAGTCCCTGCTCGGCCACTCTGCTGGACTGTGGAATCTTaGTCAAATGAAACAGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: TERQRSAPSSQVPARPLCWTVES*SNETVL Trigger: CAACACTGTTTCATTTGACAAAGATTCCACAGTCCA...GCAGAGTGGCCGAGCAGGGACTTGGGAAGAAGGTGCTGATCTTTGCCTTTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR CAA 90 bp | GATGGGCAGGCTCCACCGCTTCCACCTCAGAGGAGATTTTGGTACACTTGGGTTTGGACTGTGGAATCTTaGTCAAATGAAACAGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: DGQAPPLPPQRRFWYTWVWTVES*SNETVL Trigger: CAACACTGTTTCATTTGACAAAGATTCCACAGTCCA...AACCCAAGTGTACCAAAATCTCCTCTGAGGTGGAAGCGGTGGAGCCTGCCCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR CAA 90 bp | TTGAAACCAGTAAAACATGGGCTCTCAGATACTCCTCTGGGCAGGCACTACCCTAGAAGGGATTCTTGGTaGCCTGGTAGAGGAGATATG | + |
|
Preference number: 5 (lower is better) Translates to: LKPVKHGLSDTPLGRHYPRRDSW*PGRGDM Trigger: CATATCTCCTCTACCAGGCAACCAAGAATCCCTTCT...AGGGTAGTGCCTGCCCAGAGGAGTATCTGAGAGCCCATGTTTTACTGGTTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR CAA 90 bp | CCAGACACAGATCACCATTCCAAGAGCACAGGAGCAAGAAGCAACCCAAGCTTATTCCCTAGGACATCATaGATGTTCAGATTGGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PDTDHHSKSTGARSNPSLFPRTS*MFRLEG Trigger: CCCTTCCAATCTGAACATCAATGATGTCCTAGGGAA...TAAGCTTGGGTTGCTTCTTGCTCCTGTGCTCTTGGAATGGTGATCTGTGTCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
||
| CDS-3UTR CAA 90 bp | CTCGCTGAGAAAGAAGCTTTCCATCCGGTCTTCTTTAGACTTGTCTATGACGTGAATAATCCTGTATCGTaGCTCCGCAAGTTCCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LAEKEAFHPVFFRLVYDVNNPVS*LRKFQR Trigger: CCTCTGGAACTTGCGGAGCAACGATACAGGATTATT...CACGTCATAGACAAGTCTAAAGAAGACCGGATGGAAAGCTTCTTTCTCAGCGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204804.3 |
||
| CDS-3UTR CAA 90 bp | GAAACCAGTAAAACATGGGCTCTCAGATACTCCTCTGGGCAGGCACTACCCTCATATCTGGTTCCAGATTaGTGTACTGGATTCTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ETSKTWALRYSSGQALPSYLVPD*CTGFSS Trigger: TGAAGAGAATCCAGTACACAAATCTGGAACCAGATA...TGAGGGTAGTGCCTGCCCAGAGGAGTATCTGAGAGCCCATGTTTTACTGGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089162.5 |
||
| CDS-3UTR CAA 90 bp | TCTGACCAGCACTATGTTTGTCCACATCAAGAGAACAAGATCTCAGAGCTCAGATACAAACTTTTCCTCTaGGTCCCGCTCCCCATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SDQHYVCPHQENKISELRYKLFL*VPLPIF Trigger: GAAGATGGGGAGCGGGACCAAGAGGAAAAGTTTGTA...TCTGAGCTCTGAGATCTTGTTCTCTTGATGTGGACAAACATAGTGCTGGTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089162.5 |
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| CDS-3UTR CAA 90 bp | TACCCTCTGACCAGCACTATGTTTGTCCACATCAAGAGAACAAGATCTCAGAGCTTCCCTAGGACATCATaGATGTTCAGATTGGAAGGG | + |
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Preference number: 5 (lower is better) Translates to: YPLTSTMFVHIKRTRSQSFPRTS*MFRLEG Trigger: CCCTTCCAATCTGAACATCAATGATGTCCTAGGGAA...GCTCTGAGATCTTGTTCTCTTGATGTGGACAAACATAGTGCTGGTCAGAGGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| CDS-3UTR CAA 90 bp | AGACGACTGCATTTATTGAAACCAGTAAAACATGGGCTCTCAGATACTCCTCTGAGAAGGGATTCTTGGTaGCCTGGTAGAGGAGATATG | + |
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Preference number: 5 (lower is better) Translates to: RRLHLLKPVKHGLSDTPLRRDSW*PGRGDM Trigger: CATATCTCCTCTACCAGGCAACCAAGAATCCCTTCT...CAGAGGAGTATCTGAGAGCCCATGTTTTACTGGTTTCAATAAATGCAGTCGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| CDS-3UTR CAA 90 bp | CTCAATGGTAAGATTTACAGGCATTATCTTATTTACCCTCAGCCTTGTCAACAGTCATTGATGTTCAGATaGGAAGGGTCTCCGCGGTCA | + |
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Preference number: 5 (lower is better) Translates to: LNGKIYRHYLIYPQPCQQSLMFR*EGSPRS Trigger: TGACCGCGGAGACCCTTCCAATCTGAACATCAATGA...CTGTTGACAAGGCTGAGGGTAAATAAGATAATGCCTGTAAATCTTACCATTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| CDS-3UTR CAA 90 bp | TACCCTCTGACCAGCACTATGTTTGTCCACATCAAGAGAACAAGATCTCAGAGCTCAAATGAAACAGTGTaGATCACTAACTTGACTGCC | + |
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Preference number: 5 (lower is better) Translates to: YPLTSTMFVHIKRTRSQSSNETV*ITNLTA Trigger: GGCAGTCAAGTTAGTGATCAACACTGTTTCATTTGA...GCTCTGAGATCTTGTTCTCTTGATGTGGACAAACATAGTGCTGGTCAGAGGGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| CDS-3UTR CAA 90 bp | CATCTTCAGAGAAGAATTCCTTCCAAGGCAATTCCCGAAGACGTTTGTCCACAGTCACCAAAGGGCTGTTaGGAATCAGTTATTATTCTG | + |
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Preference number: 5 (lower is better) Translates to: HLQRRIPSKAIPEDVCPQSPKGC*ESVIIL Trigger: CAGAATAATAACTGATTCCAAACAGCCCTTTGGTGA...CTGTGGACAAACGTCTTCGGGAATTGCCTTGGAAGGAATTCTTCTCTGAAGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204804.3 |
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| CDS-3UTR CAA 90 bp | CTTTATATGTCTGGCAGTAGACAGTGTTCTTCATCTAGCCCCACAAATCACTGGATGAATTTCCCATTATaGCCAATGTATCCAAGGCAT | + |
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Preference number: 5 (lower is better) Translates to: LYMSGSRQCSSSSPTNHWMNFPL*PMYPRH Trigger: ATGCCTTGGATACATTGGCAATAATGGGAAATTCAT...CCAGTGATTTGTGGGGCTAGATGAAGAACACTGTCTACTGCCAGACATATAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| CDS-3UTR CAA 90 bp | AGACGACTGCATTTATTGAAACCAGTAAAACATGGGCTCTCAGATACTCCTCTGTCAAATGAAACAGTGTaGATCACTAACTTGACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RRLHLLKPVKHGLSDTPLSNETV*ITNLTA Trigger: GGCAGTCAAGTTAGTGATCAACACTGTTTCATTTGA...CAGAGGAGTATCTGAGAGCCCATGTTTTACTGGTTTCAATAAATGCAGTCGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| CDS-3UTR CAA 90 bp | AGACGACTGCATTTATTGAAACCAGTAAAACATGGGCTCTCAGATACTCCTCTGTCACCAAAGGGCTGTTaGGAATCAGTTATTATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RRLHLLKPVKHGLSDTPLSPKGC*ESVIIL Trigger: CAGAATAATAACTGATTCCAAACAGCCCTTTGGTGA...CAGAGGAGTATCTGAGAGCCCATGTTTTACTGGTTTCAATAAATGCAGTCGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| CDS-3UTR CAA 90 bp | CAGATAATCTGCTTAAAGAAAGTTTTCTATACAGTAGACGAGACACTGTGGATAGTGCAGGTCTCATTATaGCTGTCAGGAGGAACACCT | + |
|
Preference number: 5 (lower is better) Translates to: QIICLKKVFYTVDETLWIVQVSL*LSGGTP Trigger: AGGTGTTCCTCCTGACAGCAATAATGAGACCTGCAC...TATCCACAGTGTCTCGTCTACTGTATAGAAAACTTTCTTTAAGCAGATTATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| CDS-3UTR CAA 90 bp | CTCAATGGTAAGATTTACAGGCATTATCTTATTTACCCTCAGCCTTGTCAACAGAGCAGATACAAGTATTaGCAAGTCTCGCTGAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LNGKIYRHYLIYPQPCQQSRYKY*QVSLRK Trigger: CTTTCTCAGCGAGACTTGCAAATACTTGTATCTGCT...CTGTTGACAAGGCTGAGGGTAAATAAGATAATGCCTGTAAATCTTACCATTGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089162.5 |
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| CDS CCA 72 bp | CTGGGCCCCAGCCCGAAGACCAACCAGAGCACCGCGTaGAGGCCGAGGCGCAGCAGCACCAGCCCCAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: LGPSPKTNQSTA*RPRRSSTSPRT Trigger: TGTCCTGGGGCTGGTGCTGCTGCGCCTCGGCCTCCACGCGGTGCTCTGGTTGGTCTTCGGGCTGGGGCCCAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| CDS TCA 72 bp | CGCGGTCAGGCCCCCGGCCGCGGCAGTAGATGGGGTTaGGCTCGTCCTGCGGAAAGGCGTGCGCCATGTAGT | + |
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Preference number: 6 (lower is better) Translates to: RGQAPGRGSRWG*ARPAERRAPCS Trigger: ACTACATGGCGCACGCCTTTCCGCAGGACGAGCTCAACCCCATCTACTGCCGCGGCCGGGGGCCTGACCGCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| CDS TCA 72 bp | AGCCGTCGGGGTCCCTCAAGCGCTGGAAGCCGAAGCTaGGCGGAAACCGCTGGTAGAAGCCCATGCTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SRRGPSSAGSRS*AETAGRSPCWA Trigger: GGCCCAGCATGGGCTTCTACCAGCGGTTTCCGCTCAGCTTCGGCTTCCAGCGCTTGAGGGACCCCGACGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| CDS GCA 72 bp | CGTGCGCCATGTAGTTGTCATAGCCGAAGACGAACATaGCCCGCGCCAGGTCGCGCATCTGGGCACGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: RAPCSCHSRRRT*PAPGRASGHAA Trigger: AGCTGCGTGCCCAGATGCGCGACCTGGCGCGGGGCATGTTCGTCTTCGGCTATGACAACTACATGGCGCACG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| CDS CAA 72 bp | TCTCAGAGGGTAGAAGAGAACATCAGGGGCCTGGAGTaGCCAGTTATAGCGCTCAGGGAGGGCCCCGTACCG | + |
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Preference number: 6 (lower is better) Translates to: SQRVEENIRGLE*PVIALREGPVP Trigger: CGGTACGGGGCCCTCCCTGAGCGCTATAACTGGCAACTCCAGGCCCCTGATGTTCTCTTCTACCCTCTGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| CDS CCA 72 bp | CTGCCCACTGAACATGTTCACGTTGACGTAGAGCGGTaGGTCTCCTTCTCCTTCATTGCAGGCTTCCCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LPTEHVHVDVER*VSFSFIAGFPA Trigger: GGCCGGGAAGCCTGCAATGAAGGAGAAGGAGACCCACCGCTCTACGTCAACGTGAACATGTTCAGTGGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| CDS GCA 72 bp | GGAGAGAACCGGCCCCCGCTGTGCAGGTCTCATTATTaGTGTCAGGAGGAACACCTGTCTTCAGATTCACCC | + |
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Preference number: 6 (lower is better) Translates to: GENRPPLCRSHY*CQEEHLSSDSP Trigger: GGGTGAATCTGAAGACAGGTGTTCCTCCTGACAGCAATAATGAGACCTGCACAGCGGGGGCCGGTTCTCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| CDS GCA 72 bp | TCCCAAATTCCACCAGGAGAGAACCGGCCCCCGCTGTaGAGGTCTCATTATTGCTGTCAGGAGGAACACCTG | + |
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Preference number: 6 (lower is better) Translates to: SQIPPGENRPPL*RSHYCCQEEHL Trigger: CAGGTGTTCCTCCTGACAGCAATAATGAGACCTGCACAGCGGGGGCCGGTTCTCTCCTGGTGGAATTTGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| CDS GCA 72 bp | TCCCCTATCAGAACCTGCAGTCCAGGGAAGAAAGCCTaGAGCGAGTCAATCCAGGTGTTCATGAGCTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SPIRTCSPGKKA*SESIQVFMSCP Trigger: TGGGCAGCTCATGAACACCTGGATTGACTCGCTGCAGGCTTTCTTCCCTGGACTGCAGGTTCTGATAGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| CDS CCA 72 bp | TATAGCGCTCAGGGAGGGCCCCGTACCGCTTCCATATaGCATAGTAGAAGGCGTGTAGGCAGATGGCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: YSAQGGPRTASI*HSRRRVGRWHL Trigger: AAGATGCCATCTGCCTACACGCCTTCTACTATGCCATATGGAAGCGGTACGGGGCCCTCCCTGAGCGCTATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| CDS CAA 72 bp | AGGAGAGAACCGGCCCCCGCTGTGCAGGTCTCATTATaGCTGTCAGGAGGAACACCTGTCTTCAGATTCACC | + |
|
Preference number: 6 (lower is better) Translates to: RREPAPAVQVSL*LSGGTPVFRFT Trigger: GGTGAATCTGAAGACAGGTGTTCCTCCTGACAGCAATAATGAGACCTGCACAGCGGGGGCCGGTTCTCTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| CDS CCA 72 bp | AGGATAGGGGATCCCTGTCTTGGTGTTTTCAAAGGCTaGAAGGAGCCGCACAGCCAAGTCATGGGCCATGTA | + |
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Preference number: 6 (lower is better) Translates to: RIGDPCLGVFKG*KEPHSQVMGHV Trigger: TACATGGCCCATGACTTGGCTGTGCGGCTCCTTCCAGCCTTTGAAAACACCAAGACAGGGATCCCCTATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| CDS CCA 72 bp | TCTTCAGATTCACCCGAGGATAGGGGATCCCTGTCTTaGTGTTTTCAAAGGCTGGAAGGAGCCGCACAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SSDSPEDRGSLS*CFQRLEGAAQP Trigger: TGGCTGTGCGGCTCCTTCCAGCCTTTGAAAACACCAAGACAGGGATCCCCTATCCTCGGGTGAATCTGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| CDS CAA 90 bp | TGGCCTGTCTGGATGTTCACAACATTGCCTAATAATCCTGTATCGTaGCTCCGCAAGTTCCAGAGGGCTTTCACAGCTCGTCTGGCAACC | + |
|
Preference number: 6 (lower is better) Translates to: WPVWMFTTLPNNPVS*LRKFQRAFTARLAT Trigger: GGTTGCCAGACGAGCTGTGAAAGCCCTCTGGAACTTGCGGAGCAACGATACAGGATTATTAGGCAATGTTGTGAACATCCAGACAGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| CDS TCA 72 bp | CAACCAGAGTCAGAGAGTAATTCCCTAGGACATCATTaGTGTTCAGATTGGAAGGGTCTCCGCGGTCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: QPESESNSLGHH*CSDWKGLRGQA Trigger: GGCCTGACCGCGGAGACCCTTCCAATCTGAACATCAATGATGTCCTAGGGAATTACTCTCTGACTCTGGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| CDS CCA 72 bp | GCTTCCATATGGCATAGTAGAAGGCGTGTAGGCAGATaGCATCTTCCACATCCCCTATCAGAACCTGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: ASIWHSRRRVGR*HLPHPLSEPAV Trigger: GACTGCAGGTTCTGATAGGGGATGTGGAAGATGCCATCTGCCTACACGCCTTCTACTATGCCATATGGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| CDS GCA 72 bp | GGATGTTCACAACATTGCCTAATAATCCTGTATCGTTaGTCCGCAAGTTCCAGAGGGCTTTCACAGCTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: GCSQHCLIILYR*SASSRGLSQLV Trigger: GACGAGCTGTGAAAGCCCTCTGGAACTTGCGGAGCAACGATACAGGATTATTAGGCAATGTTGTGAACATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| CDS GCA 72 bp | TTCCAACCCAATGGCCTGTCTGGATGTTCACAACATTaGCTAATAATCCTGTATCGTTGCTCCGCAAGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: FQPNGLSGCSQH*LIILYRCSASS Trigger: GGAACTTGCGGAGCAACGATACAGGATTATTAGGCAATGTTGTGAACATCCAGACAGGCCATTGGGTTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| CDS CAA 72 bp | TGGATGTTCACAACATTGCCTAATAATCCTGTATCGTaGCTCCGCAAGTTCCAGAGGGCTTTCACAGCTCGT | + |
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Preference number: 6 (lower is better) Translates to: WMFTTLPNNPVS*LRKFQRAFTAR Trigger: ACGAGCTGTGAAAGCCCTCTGGAACTTGCGGAGCAACGATACAGGATTATTAGGCAATGTTGTGAACATCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| CDS CAA 90 bp | CCCAGAACCCTTATCGTAGCTTCGAAGACCTGGACTGTGGAATCTTaGTCAAATGAAACAGTGTTGATCACTAACTTGACTGCCTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PRTLIVASKTWTVES*SNETVLITNLTAFW Trigger: CCAGAAGGCAGTCAAGTTAGTGATCAACACTGTTTCATTTGACAAAGATTCCACAGTCCAGGTCTTCGAAGCTACGATAAGGGTTCTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| CDS CAA 90 bp | GCTTCGAAGACCTGGACTGTGGAATCTTTGTCAAATGAAACAGTGTaGATCACTAACTTGACTGCCTTCTGGAACTCGGATGAATTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: ASKTWTVESLSNETV*ITNLTAFWNSDEFP Trigger: GGGAAATTCATCCGAGTTCCAGAAGGCAGTCAAGTTAGTGATCAACACTGTTTCATTTGACAAAGATTCCACAGTCCAGGTCTTCGAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| CDS TCA 72 bp | CTTTCCATCCGGTCTTCTTTAGACTTGTCTATGACGTaGTGCAGCGTAGCATATCCACATTTGACTTTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LSIRSSLDLSMT*CSVAYPHLTFV Trigger: CACAAAAGTCAAATGTGGATATGCTACGCTGCATCACGTCATAGACAAGTCTAAAGAAGACCGGATGGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089162.5 |
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| CDS CCA 72 bp | CATAATCCTCAATTGTCATGTCACCAAAGGGCTGTTTaGAATCAGTTATTATTCTGTGAGCAGAAAGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: HNPQLSCHQRAV*NQLLFCEQKGG Trigger: GCCTCCTTTCTGCTCACAGAATAATAACTGATTCCAAACAGCCCTTTGGTGACATGACAATTGAGGATTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| CDS CAA 90 bp | TGGACTGTGGAATCTTTGTCAAATGAAACAGTGTTGATCACTAACTaGACTGCCTTCTGGAACTCGGATGAATTTCCCATTATTGCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: WTVESLSNETVLITN*TAFWNSDEFPIIAN Trigger: ATTGGCAATAATGGGAAATTCATCCGAGTTCCAGAAGGCAGTCAAGTTAGTGATCAACACTGTTTCATTTGACAAAGATTCCACAGTCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| CDS CAA 72 bp | CTTATCGTAGCTTCGAAGACCTGGACTGTGGAATCTTaGTCAAATGAAACAGTGTTGATCACTAACTTGACT | + |
|
Preference number: 6 (lower is better) Translates to: LIVASKTWTVES*SNETVLITNLT Trigger: AGTCAAGTTAGTGATCAACACTGTTTCATTTGACAAAGATTCCACAGTCCAGGTCTTCGAAGCTACGATAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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| CDS CAA 72 bp | GAATCTTTGTCAAATGAAACAGTGTTGATCACTAACTaGACTGCCTTCTGGAACTCGGATGAATTTCCCATT | + |
|
Preference number: 6 (lower is better) Translates to: ESLSNETVLITN*TAFWNSDEFPI Trigger: AATGGGAAATTCATCCGAGTTCCAGAAGGCAGTCAAGTTAGTGATCAACACTGTTTCATTTGACAAAGATTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089162.5 ENSMUST00000204804.3 |
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