RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EDC4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000036270

Ensembl transcript IDs: ENSMUST00000040254.16, ENSMUST00000119261.8, ENSMUST00000132680.8, ENSMUST00000136048.8, ENSMUST00000145618.2

Found 703 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGCTGGAGCCAGTGCAGGAGCTGTGGCCCGTAGTGTCTCCTGGTTaGTCTCTGGGCCAGCAATCCGCTCCCGAACACTCACAGGAGCGC +
Preference number: 1 (lower is better)
Translates to: ELEPVQELWPVVSPG*SLGQQSAPEHSQER
Trigger: GCGCTCCTGTGAGTGTTCGGGAGCGGATTGCTGGCCCAGAGACCAACCAGGAGACACTACGGGCCACAGCTCCTGCACTGGCTCCAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
3UTR CCA 90 bp GCTGGAGCTGGAGCCAGTGCAGGAGCTGTGGCCCGTAGTGTCTCCTaGTTGGTCTCTGGGCCAGCAATCCGCTCCCGAACACTCACAGGA +
Preference number: 1 (lower is better)
Translates to: AGAGASAGAVARSVS*LVSGPAIRSRTLTG
Trigger: TCCTGTGAGTGTTCGGGAGCGGATTGCTGGCCCAGAGACCAACCAGGAGACACTACGGGCCACAGCTCCTGCACTGGCTCCAGCTCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
3UTR GCA 90 bp ATCCCTGGCTGTAAGCCTAGTGCAGGAGCGAGAGGCTTGGAGAGCTaGCTCCCTCCACACACCAGAGAGGAAGGCCTGAGCAGGGAAACA +
Preference number: 1 (lower is better)
Translates to: IPGCKPSAGARGLES*LPPHTREEGLSRET
Trigger: TGTTTCCCTGCTCAGGCCTTCCTCTCTGGTGTGTGGAGGGAGGCAGCTCTCCAAGCCTCTCGCTCCTGCACTAGGCTTACAGCCAGGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
3UTR GCA 90 bp CCAGCAATCCGCTCCCGAACACTCACAGGAGCGCCACAGAGGATGTaGAAATTATCTGGGTGTGGGGCGCGGCGAGCTTCTTGCTGCAGT +
Preference number: 1 (lower is better)
Translates to: PAIRSRTLTGAPQRM*KLSGCGARRASCCS
Trigger: ACTGCAGCAAGAAGCTCGCCGCGCCCCACACCCAGATAATTTGCACATCCTCTGTGGCGCTCCTGTGAGTGTTCGGGAGCGGATTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
3UTR CCA 90 bp CGACCCATGCCATCCCCCAGGCGGATGAGACATTCAGCAAAGCCTTaGTATATGGTATCACAGCGGTTTGGGCCCTCAGAGGCCACTGCG +
Preference number: 1 (lower is better)
Translates to: RPMPSPRRMRHSAKP*YMVSQRFGPSEATA
Trigger: CGCAGTGGCCTCTGAGGGCCCAAACCGCTGTGATACCATATACCAAGGCTTTGCTGAATGTCTCATCCGCCTGGGGGATGGCATGGGTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
3UTR TCA 90 bp CAGTCTGTAGCTCGCCTCCTCGACCCATGCCATCCCCCAGGCGGATaGGACATTCAGCAAAGCCTTGGTATATGGTATCACAGCGGTTTG +
Preference number: 1 (lower is better)
Translates to: QSVARLLDPCHPPGG*DIQQSLGIWYHSGL
Trigger: CAAACCGCTGTGATACCATATACCAAGGCTTTGCTGAATGTCTCATCCGCCTGGGGGATGGCATGGGTCGAGGAGGCGAGCTACAGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
3UTR CCA 90 bp GTAAAAAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTaGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACACTAC +
Preference number: 1 (lower is better)
Translates to: VKRNMENSTQVVSRS*GHASGMVGPKKAHY
Trigger: GTAGTGTGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTTTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
3UTR CAA 90 bp GGAGCTGGAGCCAGTGCAGGAGCTGTGGCCCGTAGTGTCTCCTGGTaGGTCTCTGGGCCAGCAATCCGCTCCCGAACACTCACAGGAGCG +
Preference number: 2 (lower is better)
Translates to: GAGASAGAVARSVSW*VSGPAIRSRTLTGA
Trigger: CGCTCCTGTGAGTGTTCGGGAGCGGATTGCTGGCCCAGAGACCAACCAGGAGACACTACGGGCCACAGCTCCTGCACTGGCTCCAGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
3UTR-3UTR TCA 90 bp AGGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGTAGAGCACTGCCCGTaGGCCCTGCTGCATACCTCC +
Preference number: 2 (lower is better)
Translates to: RHGRTQEGTLRALGPPDPVEHCP*ALLHTS
Trigger: GGAGGTATGCAGCAGGGCTCACGGGCAGTGCTCTAC...AGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
3UTR-3UTR CCA 90 bp GCCTCCTCGACCCATGCCATCCCCCAGGCGGATGAGACATTCAGCAAAGCCTTGCAGCGGCGGCGCCAGTaGCAGTGGCAGCAGTTGCAC +
Preference number: 2 (lower is better)
Translates to: ASSTHAIPQADETFSKALQRRRQ*QWQQLH
Trigger: GTGCAACTGCTGCCACTGCCACTGGCGCCGCCGCTG...CAAGGCTTTGCTGAATGTCTCATCCGCCTGGGGGATGGCATGGGTCGAGGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
3UTR-3UTR CCA 90 bp GGCGCCAGTGGCAGTGGCAGCAGTTGCACATCATCCCTGGCTGTAAGCCTAGTGCAGGAGCGAGAGGCTTaGAGAGCTGCCTCCCTCCAC +
Preference number: 2 (lower is better)
Translates to: GASGSGSSCTSSLAVSLVQEREA*RAASLH
Trigger: GTGGAGGGAGGCAGCTCTCCAAGCCTCTCGCTCCTG...CACTAGGCTTACAGCCAGGGATGATGTGCAACTGCTGCCACTGCCACTGGCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
3UTR CAA 90 bp TTGCACATCATCCCTGGCTGTAAGCCTAGTGCAGGAGCGAGAGGCTaGGAGAGCTGCCTCCCTCCACACACCAGAGAGGAAGGCCTGAGC +
Preference number: 2 (lower is better)
Translates to: LHIIPGCKPSAGARG*ESCLPPHTREEGLS
Trigger: GCTCAGGCCTTCCTCTCTGGTGTGTGGAGGGAGGCAGCTCTCCAAGCCTCTCGCTCCTGCACTAGGCTTACAGCCAGGGATGATGTGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
3UTR-3UTR TCA 90 bp AGTGTCTCCTGGTTGGTCTCTGGGCCAGCAATCCGCTCCCGAACACTCACAGGAGACATGGCCCTGCCTTaGCCTAAACCTGCCAACTGG +
Preference number: 2 (lower is better)
Translates to: SVSWLVSGPAIRSRTLTGDMALP*PKPANW
Trigger: CCAGTTGGCAGGTTTAGGTCAAGGCAGGGCCATGTC...TCCTGTGAGTGTTCGGGAGCGGATTGCTGGCCCAGAGACCAACCAGGAGACACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
3UTR CAA 90 bp TCGACCCATGCCATCCCCCAGGCGGATGAGACATTCAGCAAAGCCTaGGTATATGGTATCACAGCGGTTTGGGCCCTCAGAGGCCACTGC +
Preference number: 2 (lower is better)
Translates to: STHAIPQADETFSKA*VYGITAVWALRGHC
Trigger: GCAGTGGCCTCTGAGGGCCCAAACCGCTGTGATACCATATACCAAGGCTTTGCTGAATGTCTCATCCGCCTGGGGGATGGCATGGGTCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
3UTR-3UTR CCA 90 bp GGCAGCCTCCCACCTGCCGGTACCTGCAGACAGTCTGTAGCTCGCCTCCTCGACCATTCAGCAAAGCCTTaGTATATGGTATCACAGCGG +
Preference number: 2 (lower is better)
Translates to: GSLPPAGTCRQSVARLLDHSAKP*YMVSQR
Trigger: CCGCTGTGATACCATATACCAAGGCTTTGCTGAATG...GTCGAGGAGGCGAGCTACAGACTGTCTGCAGGTACCGGCAGGTGGGAGGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
3UTR-3UTR TCA 90 bp AAAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTTGCCCTGGGCCCGCCTaGCCCTGCTGGTTACCACAA +
Preference number: 2 (lower is better)
Translates to: KGTWKIQLKWCHDLGVTLCPGPA*PCWLPQ
Trigger: TTGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGGCA...AAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
3UTR-3UTR TCA 90 bp GGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGACATGGCCCTGCCTTaGCCTAAACCTGCCAACTGG +
Preference number: 2 (lower is better)
Translates to: GTWKIQLKWCHDLGVTLQDMALP*PKPANW
Trigger: CCAGTTGGCAGGTTTAGGTCAAGGCAGGGCCATGTC...CTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
3UTR CCA 72 bp CCAGTGCAGGAGCTGTGGCCCGTAGTGTCTCCTGGTTaGTCTCTGGGCCAGCAATCCGCTCCCGAACACTCA +
Preference number: 3 (lower is better)
Translates to: PVQELWPVVSPG*SLGQQSAPEHS
Trigger: TGAGTGTTCGGGAGCGGATTGCTGGCCCAGAGACCAACCAGGAGACACTACGGGCCACAGCTCCTGCACTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
3UTR-3UTR CAA 90 bp ATGTGCAAATTATCTGGGTGTGGGGCGCGGCGAGCTTCTTGCTGCAGTGACTCCGCAGGAGCGAGAGGCTaGGAGAGCTGCCTCCCTCCA +
Preference number: 3 (lower is better)
Translates to: MCKLSGCGARRASCCSDSAGARG*ESCLPP
Trigger: TGGAGGGAGGCAGCTCTCCAAGCCTCTCGCTCCTGC...GGAGTCACTGCAGCAAGAAGCTCGCCGCGCCCCACACCCAGATAATTTGCACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
3UTR TCA 72 bp GACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTaGCCCTGCTGGTTACCACAATCAGTAGAGCACTGC +
Preference number: 3 (lower is better)
Translates to: DPRRHTTCPGPA*PCWLPQSVEHC
Trigger: GCAGTGCTCTACTGATTGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
3UTR GCA 72 bp TGCAAATTATCTGGGTGTGGGGCGCGGCGAGCTTCTTaGTGCAGTGACTCCCACACTGCAGCCGCCTCCTCT +
Preference number: 3 (lower is better)
Translates to: CKLSGCGARRAS*CSDSHTAAASS
Trigger: AGAGGAGGCGGCTGCAGTGTGGGAGTCACTGCAGCAAGAAGCTCGCCGCGCCCCACACCCAGATAATTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
3UTR GCA 72 bp CGCTCCCGAACACTCACAGGAGCGCCACAGAGGATGTaGAAATTATCTGGGTGTGGGGCGCGGCGAGCTTCT +
Preference number: 3 (lower is better)
Translates to: RSRTLTGAPQRM*KLSGCGARRAS
Trigger: AGAAGCTCGCCGCGCCCCACACCCAGATAATTTGCACATCCTCTGTGGCGCTCCTGTGAGTGTTCGGGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
3UTR CCA 72 bp GGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTaGGCCCGCCTGACCCTGCTGGTTACCACAATCAGT +
Preference number: 3 (lower is better)
Translates to: GMVGPKKAHYVP*ARLTLLVTTIS
Trigger: ACTGATTGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
3UTR TCA 72 bp CTGCATACCTCCCTCCACACACCAGAGAGGAAGGCCTaGGCAGGGAAACAGCAGACATGGCCCTGCCTTGAC +
Preference number: 3 (lower is better)
Translates to: LHTSLHTPERKA*AGKQQTWPCLD
Trigger: GTCAAGGCAGGGCCATGTCTGCTGTTTCCCTGCTCAGGCCTTCCTCTCTGGTGTGTGGAGGGAGGTATGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
3UTR TCA 72 bp CCCTGCTGGTTACCACAATCAGTAGAGCACTGCCCGTaGGCCCTGCTGCATACCTCCCTCCACACACCAGAG +
Preference number: 3 (lower is better)
Translates to: PCWLPQSVEHCP*ALLHTSLHTPE
Trigger: CTCTGGTGTGTGGAGGGAGGTATGCAGCAGGGCTCACGGGCAGTGCTCTACTGATTGTGGTAACCAGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
3UTR TCA 72 bp GCTCGCCTCCTCGACCCATGCCATCCCCCAGGCGGATaGGACATTCAGCAAAGCCTTGGTATATGGTATCAC +
Preference number: 3 (lower is better)
Translates to: ARLLDPCHPPGG*DIQQSLGIWYH
Trigger: GTGATACCATATACCAAGGCTTTGCTGAATGTCTCATCCGCCTGGGGGATGGCATGGGTCGAGGAGGCGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
3UTR CCA 72 bp CCATCCCCCAGGCGGATGAGACATTCAGCAAAGCCTTaGTATATGGTATCACAGCGGTTTGGGCCCTCAGAG +
Preference number: 3 (lower is better)
Translates to: PSPRRMRHSAKP*YMVSQRFGPSE
Trigger: CTCTGAGGGCCCAAACCGCTGTGATACCATATACCAAGGCTTTGCTGAATGTCTCATCCGCCTGGGGGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
3UTR CCA 72 bp AACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTaGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAG +
Preference number: 3 (lower is better)
Translates to: NMENSTQVVSRS*GHASGMVGPKK
Trigger: CTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GCGCTAGAGCGGCGGCGAGCAACACAGGGGCTGGAGCTGGAGCCAGTGCAGGAGCGACTTGGGGAGGCCTaGGGTAGCCCTAATGGCTCC +
Preference number: 4 (lower is better)
Translates to: ALERRRATQGLELEPVQERLGEA*GSPNGS
Trigger: GGAGCCATTAGGGCTACCCCAGGCCTCCCCAAGTCG...CTCCTGCACTGGCTCCAGCTCCAGCCCCTGTGTTGCTCGCCGCCGCTCTAGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR TCA 90 bp GGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTCACTCTGCAGTGTGCTaGCCAGGCCCCGAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GRTQEGTLRALGPPDPAGHSAVC*PGPEAG
Trigger: CCCAGCTTCGGGGCCTGGTCAGCACACTGCAGAGTG...ACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp GGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTGGCTCTGCCACCTGGTaGTCTGTGAGCCGGGATCCC +
Preference number: 4 (lower is better)
Translates to: GRTQEGTLRALGPPDPAGGSATW*SVSRDP
Trigger: GGGATCCCGGCTCACAGAGCACCAGGTGGCAGAGCC...ACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GCGCTAGAGCGGCGGCGAGCAACACAGGGGCTGGAGCTGGAGCCAGTGCAGGAGTGGGCTTGTTGGGCCTaGCAGTCAAGGTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: ALERRRATQGLELEPVQEWACWA*QSRWAE
Trigger: CTCTGCCCACCTTGACTGCCAGGCCCAACAAGCCCA...CTCCTGCACTGGCTCCAGCTCCAGCCCCTGTGTTGCTCGCCGCCGCTCTAGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp GGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTCAGGCAGTTCCACAATaGGCCGCAGGTCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GRTQEGTLRALGPPDPAGQAVPQ*AAGQAG
Trigger: CCCAGCCTGACCTGCGGCGCATTGTGGAACTGCCTG...ACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp GGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGTGCTCGGTGGCACTCTaGAGTGTGCTGACCAGGCCC +
Preference number: 4 (lower is better)
Translates to: GMVGPKKAHYVPWARLTLCSVAL*SVLTRP
Trigger: GGGCCTGGTCAGCACACTGCAGAGTGCCACCGAGCA...CAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp CCCGTGAGCCCTGCTGCATACCTCCCTCCACACACCAGAGAGGAAGGCCTGAGCGCGCGGCCCTCGTCCTaGTTCTGCAGCAGCTCCATC +
Preference number: 4 (lower is better)
Translates to: PVSPAAYLPPHTREEGLSARPSS*FCSSSI
Trigger: GATGGAGCTGCTGCAGAACCAGGACGAGGGCCGCGC...GCTCAGGCCTTCCTCTCTGGTGTGTGGAGGGAGGTATGCAGCAGGGCTCACGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCGACTTGGGGAGGCCTaGGGTAGCCCTAATGGCTCC +
Preference number: 4 (lower is better)
Translates to: GMVGPKKAHYVPWARLTLRLGEA*GSPNGS
Trigger: GGAGCCATTAGGGCTACCCCAGGCCTCCCCAAGTCG...CAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGGCTCAGGGCCTTGCCTaGGCCGAGGAGAGAGTAGGT +
Preference number: 4 (lower is better)
Translates to: GMVGPKKAHYVPWARLTLAQGLA*AEERVG
Trigger: ACCTACTCTCTCCTCGGCCCAGGCAAGGCCCTGAGC...CAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp GCGCTAGAGCGGCGGCGAGCAACACAGGGGCTGGAGCTGGAGCCAGTGCAGGAGTCTCACTGCTCAGACTaGGGAAGTCTGCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: ALERRRATQGLELEPVQESHCSD*GSLQEQ
Trigger: CTGCTCCTGCAGACTTCCTCAGTCTGAGCAGTGAGA...CTCCTGCACTGGCTCCAGCTCCAGCCCCTGTGTTGCTCGCCGCCGCTCTAGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR TCA 90 bp GGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTGGAAGGGTCCATGGCTaGGGAGCTGCTCACAGCAGA +
Preference number: 4 (lower is better)
Translates to: GRTQEGTLRALGPPDPAGGRVHG*GAAHSR
Trigger: TCTGCTGTGAGCAGCTCCTCAGCCATGGACCCTTCC...ACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp CTGTGGCCCGTAGTGTCTCCTGGTTGGTCTCTGGGCCAGCAATCCGCTCCCGAACCACCTGGTGCTCTGTaGGCCGGGATCCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: LWPVVSPGWSLGQQSAPEPPGAL*AGIPQL
Trigger: CAGCTGTGGGATCCCGGCTCACAGAGCACCAGGTGG...TTCGGGAGCGGATTGCTGGCCCAGAGACCAACCAGGAGACACTACGGGCCACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR TCA 90 bp CCCGTGAGCCCTGCTGCATACCTCCCTCCACACACCAGAGAGGAAGGCCTGAGCGGCGCACCTGAGCCATaGCAGAGCCCATGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: PVSPAAYLPPHTREEGLSGAPEP*QSPCGL
Trigger: GAGACCACATGGGCTCTGTCATGGCTCAGGTGCGCC...GCTCAGGCCTTCCTCTCTGGTGTGTGGAGGGAGGTATGCAGCAGGGCTCACGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp CCCTGGGCCCGCCTGACCCTGCTGGTTACCACAATCAGTAGAGCACTGCCCGTGTCAGCCCGATCCTCATaGAGCAGGGCCACTGTCGGG +
Preference number: 4 (lower is better)
Translates to: PWARLTLLVTTISRALPVSARSS*SRATVG
Trigger: CCCGACAGTGGCCCTGCTGCATGAGGATCGGGCTGA...CACGGGCAGTGCTCTACTGATTGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp CCCTCAGAGGCCACTGCGAGTGGTAGTAGCAGCAACAGCGTCAGGGCACAGGGTGGCAGGACCTCAGTGTaGCGTAGCCGGCAGCGACTG +
Preference number: 4 (lower is better)
Translates to: PSEATASGSSSNSVRAQGGRTSV*RSRQRL
Trigger: CAGTCGCTGCCGGCTACGGCACACTGAGGTCCTGCC...ACCCTGTGCCCTGACGCTGTTGCTGCTACTACCACTCGCAGTGGCCTCTGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp CCCTGGGCCCGCCTGACCCTGCTGGTTACCACAATCAGTAGAGCACTGCCCGTGCAGGCAGTTCCACAATaGGCCGCAGGTCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PWARLTLLVTTISRALPVQAVPQ*AAGQAG
Trigger: CCCAGCCTGACCTGCGGCGCATTGTGGAACTGCCTG...CACGGGCAGTGCTCTACTGATTGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp GCGCTAGAGCGGCGGCGAGCAACACAGGGGCTGGAGCTGGAGCCAGTGCAGGAGCAGACTGAGGAAGTCTaGAGGAGCAGGCAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: ALERRRATQGLELEPVQEQTEEV*RSRQFH
Trigger: GTGGAACTGCCTGCTCCTGCAGACTTCCTCAGTCTG...CTCCTGCACTGGCTCCAGCTCCAGCCCCTGTGTTGCTCGCCGCCGCTCTAGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp GGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTGCAGGCTGCTGCTGCTaGTGTTTAGCGTCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GRTQEGTLRALGPPDPAGAGCCC*CLASGC
Trigger: GCAGCCTGACGCTAAACAGCAGCAGCAGCAGCCTGC...ACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp CTGTGGCCCGTAGTGTCTCCTGGTTGGTCTCTGGGCCAGCAATCCGCTCCCGAAGGCTCTGCCACCTGGTaGTCTGTGAGCCGGGATCCC +
Preference number: 4 (lower is better)
Translates to: LWPVVSPGWSLGQQSAPEGSATW*SVSRDP
Trigger: GGGATCCCGGCTCACAGAGCACCAGGTGGCAGAGCC...TTCGGGAGCGGATTGCTGGCCCAGAGACCAACCAGGAGACACTACGGGCCACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp CCCGTGAGCCCTGCTGCATACCTCCCTCCACACACCAGAGAGGAAGGCCTGAGCTGTGTCAGCTGCTCCTaGAGCTGCCCACCCCGTTGC +
Preference number: 4 (lower is better)
Translates to: PVSPAAYLPPHTREEGLSCVSCS*SCPPRC
Trigger: GCAACGGGGTGGGCAGCTGCAGGAGCAGCTGACACA...GCTCAGGCCTTCCTCTCTGGTGTGTGGAGGGAGGTATGCAGCAGGGCTCACGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp GGTACCTGCAGACAGTCTGTAGCTCGCCTCCTCGACCCATGCCATCCCCCAGGCAGCTGCTGTGTCAGCTaGTCCTGCAGCTGCCCACCC +
Preference number: 4 (lower is better)
Translates to: GTCRQSVARLLDPCHPPGSCCVS*SCSCPP
Trigger: GGGTGGGCAGCTGCAGGAGCAGCTGACACAGCAGCT...GCCTGGGGGATGGCATGGGTCGAGGAGGCGAGCTACAGACTGTCTGCAGGTACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp GGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTACAGTGGCCGCCATCTaGTCGGTGGCACTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: GRTQEGTLRALGPPDPAGTVAAI*SVALCS
Trigger: ACTGCAGAGTGCCACCGAGCAGATGGCGGCCACTGT...ACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GCGCTAGAGCGGCGGCGAGCAACACAGGGGCTGGAGCTGGAGCCAGTGCAGGAGATCAGGGTTCAGCTGTaGCTGGAAGCGGATCTGCAC +
Preference number: 4 (lower is better)
Translates to: ALERRRATQGLELEPVQEIRVQL*LEADLH
Trigger: GTGCAGATCCGCTTCCAGCCACAGCTGAACCCTGAT...CTCCTGCACTGGCTCCAGCTCCAGCCCCTGTGTTGCTCGCCGCCGCTCTAGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp CCCGTGAGCCCTGCTGCATACCTCCCTCCACACACCAGAGAGGAAGGCCTGAGCGCCTGGCAGTCAAGGTaGGCAGAGGGGACAGGTGTG +
Preference number: 4 (lower is better)
Translates to: PVSPAAYLPPHTREEGLSAWQSR*AEGTGV
Trigger: CACACCTGTCCCCTCTGCCCACCTTGACTGCCAGGC...GCTCAGGCCTTCCTCTCTGGTGTGTGGAGGGAGGTATGCAGCAGGGCTCACGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
3UTR CAA 72 bp GCCAGTGCAGGAGCTGTGGCCCGTAGTGTCTCCTGGTaGGTCTCTGGGCCAGCAATCCGCTCCCGAACACTC +
Preference number: 4 (lower is better)
Translates to: ASAGAVARSVSW*VSGPAIRSRTL
Trigger: GAGTGTTCGGGAGCGGATTGCTGGCCCAGAGACCAACCAGGAGACACTACGGGCCACAGCTCCTGCACTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR TCA 90 bp AGGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGTAGCCGGCAGCGACTaGCAACCTGGATGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: RHGRTQEGTLRALGPPDPVAGSD*QPGCQS
Trigger: GCTTTGGCATCCAGGTTGTCAGTCGCTGCCGGCTAC...AGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp CCCTGGGCCCGCCTGACCCTGCTGGTTACCACAATCAGTAGAGCACTGCCCGTGTCAGGCTGGGAACCATaGGCAGCTGAAGCTAGCCCC +
Preference number: 4 (lower is better)
Translates to: PWARLTLLVTTISRALPVSGWEP*AAEASP
Trigger: GGGGCTAGCTTCAGCTGCTCATGGTTCCCAGCCTGA...CACGGGCAGTGCTCTACTGATTGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp GGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTGCCGTAGGCCAGACTTaGCTGTCAGGGGTTGCAACT +
Preference number: 4 (lower is better)
Translates to: GRTQEGTLRALGPPDPAGAVGQT*LSGVAT
Trigger: AGTTGCAACCCCTGACAGTCAAGTCTGGCCTACGGC...ACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp CTCGCCTCCTCGACCCATGCCATCCCCCAGGCGGATGAGACATTCAGCAAAGCCGCTGCCAAAACCTCCTaGGGCAGAGGCAAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LASSTHAIPQADETFSKAAAKTS*GRGKAG
Trigger: GCCAGCCTTGCCTCTGCCTCAGGAGGTTTTGGCAGC...GGCTTTGCTGAATGTCTCATCCGCCTGGGGGATGGCATGGGTCGAGGAGGCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR TCA 90 bp AGGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGAAGGCCTGATTaGGGTGGCCCTGCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: RHGRTQEGTLRALGPPDPAGRPD*GGPAAV
Trigger: TACTGCAGCAGGGCCACCTCAATCAGGCCTTCCAGC...AGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp CCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTTACCACAGCTGGAAGGCCTGATTaGGGTGGCCCTGCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: PKKAHYVPWARLTLLVTTAGRPD*GGPAAV
Trigger: TACTGCAGCAGGGCCACCTCAATCAGGCCTTCCAGC...TGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp GGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTATGTCCCGCAGATGCTaGGTGGCGTCCTCAATGTCG +
Preference number: 4 (lower is better)
Translates to: GRTQEGTLRALGPPDPAGMSRRC*VASSMS
Trigger: CGACATTGAGGACGCCACGCAGCATCTGCGGGACAT...ACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp GGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGGGGGATGCAGAGATCTaGTGCAGGGAGGCAGTAGGT +
Preference number: 4 (lower is better)
Translates to: GMVGPKKAHYVPWARLTLGDAEI*CREAVG
Trigger: ACCTACTGCCTCCCTGCAGCAGATCTCTGCATCCCC...CAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp CCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTTACCACACCTGCAGGCTGCTGCTaGTGCTGTTTAGCGTCAGGC +
Preference number: 4 (lower is better)
Translates to: PKKAHYVPWARLTLLVTTPAGCC*CCLASG
Trigger: GCCTGACGCTAAACAGCAGCAGCAGCAGCCTGCAGG...TGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp AGCACTGCCCGTGAGCCCTGCTGCATACCTCCCTCCACACACCAGAGAGGAAGGCCAAGCTCAGGGCCTTaGCTGGGCCGAGGAGAGAGT +
Preference number: 4 (lower is better)
Translates to: STAREPCCIPPSTHQRGRPSSGP*LGRGES
Trigger: ACTCTCTCCTCGGCCCAGGCAAGGCCCTGAGCTTGG...CCTTCCTCTCTGGTGTGTGGAGGGAGGTATGCAGCAGGGCTCACGGGCAGTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp AGGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTTTCCTGGGTCAGGGCTaGTTCCAGCAGGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: RHGRTQEGTLRALGPPDPFLGQG*FQQGRG
Trigger: ACCCCTTCCCTGCTGGAAGCAGCCCTGACCCAGGAA...AGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp CCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTTACCACAGTCTTCAGGGGGCTCTaGCACCTGGTGCTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: PKKAHYVPWARLTLLVTTVFRGL*HLVLCE
Trigger: CTCACAGAGCACCAGGTGGCAGAGCCCCCTGAAGAC...TGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp AGGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGTCTTCAGGGGGCTCTaGCACCTGGTGCTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: RHGRTQEGTLRALGPPDPVFRGL*HLVLCE
Trigger: CTCACAGAGCACCAGGTGGCAGAGCCCCCTGAAGAC...AGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp CTCGCCTCCTCGACCCATGCCATCCCCCAGGCGGATGAGACATTCAGCAAAGCCTGTGTCAGCTGCTCCTaGAGCTGCCCACCCCGTTGC +
Preference number: 4 (lower is better)
Translates to: LASSTHAIPQADETFSKACVSCS*SCPPRC
Trigger: GCAACGGGGTGGGCAGCTGCAGGAGCAGCTGACACA...GGCTTTGCTGAATGTCTCATCCGCCTGGGGGATGGCATGGGTCGAGGAGGCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp AGCACTGCCCGTGAGCCCTGCTGCATACCTCCCTCCACACACCAGAGAGGAAGGAGCTGCTGTGTCAGCTaGTCCTGCAGCTGCCCACCC +
Preference number: 4 (lower is better)
Translates to: STAREPCCIPPSTHQRGRSCCVS*SCSCPP
Trigger: GGGTGGGCAGCTGCAGGAGCAGCTGACACAGCAGCT...CCTTCCTCTCTGGTGTGTGGAGGGAGGTATGCAGCAGGGCTCACGGGCAGTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp GGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGACATGCAGCTGGTGTTaGACCTCGGCCCGAACACTG +
Preference number: 4 (lower is better)
Translates to: GMVGPKKAHYVPWARLTLTCSWC*TSARTL
Trigger: CAGTGTTCGGGCCGAGGTGCAACACCAGCTGCATGT...CAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp CCCGTGAGCCCTGCTGCATACCTCCCTCCACACACCAGAGAGGAAGGCCTGAGCCTGCCCACAGCCACATaGAGCTGGTGTTGCACCTCG +
Preference number: 4 (lower is better)
Translates to: PVSPAAYLPPHTREEGLSLPTAT*SWCCTS
Trigger: CGAGGTGCAACACCAGCTGCATGTGGCTGTGGGCAG...GCTCAGGCCTTCCTCTCTGGTGTGTGGAGGGAGGTATGCAGCAGGGCTCACGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTCTGGGGAGAAGCGAATaGTTTGCAGGCAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: GRTQEGTLRALGPPDPAGLGRSE*FAGRSR
Trigger: CCTGGACCTGCCTGCAAACCATTCGCTTCTCCCCAG...ACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGAAGGCTCCAGCTCCATaGGAACTCTCGGTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: GMVGPKKAHYVPWARLTLKAPAP*ELSVPR
Trigger: TCTGGGGACCGAGAGTTCCCATGGAGCTGGAGCCTT...CAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp AGGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTCCTCAGGTGGTCTaGGCAAGGAAGGGTCCATGG +
Preference number: 4 (lower is better)
Translates to: RHGRTQEGTLRALGPPDPAPQVV*ARKGPW
Trigger: CCATGGACCCTTCCTTGCCCAGACCACCTGAGGAGC...AGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp CCCGTGAGCCCTGCTGCATACCTCCCTCCACACACCAGAGAGGAAGGCCTGAGCGGTCAGCTCCTCAGGTaGTCTGGGCAAGGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: PVSPAAYLPPHTREEGLSGQLLR*SGQGRV
Trigger: GACCCTTCCTTGCCCAGACCACCTGAGGAGCTGACC...GCTCAGGCCTTCCTCTCTGGTGTGTGGAGGGAGGTATGCAGCAGGGCTCACGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGGTGCAGAGGCAGCAGTaGATACCTGACCAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: GMVGPKKAHYVPWARLTLVQRQQ*IPDQVP
Trigger: AGGGACCTGGTCAGGTATCCACTGCTGCCTCTGCAC...CAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp AGGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGGGGTTGCAACTTCCTaGGTCAGGGCTGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: RHGRTQEGTLRALGPPDPGVATS*VRAASS
Trigger: GCTGGAAGCAGCCCTGACCCAGGAAGTTGCAACCCC...AGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GCGAGAGGCTTGGAGAGCTGCCTCCCTCCACACACCAGAGAGGAAGGCCTGAGCGGGGTTGCAACTTCCTaGGTCAGGGCTGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: ARGLESCLPPHTREEGLSGVATS*VRAASS
Trigger: GCTGGAAGCAGCCCTGACCCAGGAAGTTGCAACCCC...GCTCAGGCCTTCCTCTCTGGTGTGTGGAGGGAGGCAGCTCTCCAAGCCTCTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp GGCGCCAGTGGCAGTGGCAGCAGTTGCACATCATCCCTGGCTGTAAGCCTAGTGGGGGGCTCTGCCACCTaGTGCTCTGTGAGCCGGGAT +
Preference number: 4 (lower is better)
Translates to: GASGSGSSCTSSLAVSLVGGSAT*CSVSRD
Trigger: ATCCCGGCTCACAGAGCACCAGGTGGCAGAGCCCCC...CACTAGGCTTACAGCCAGGGATGATGTGCAACTGCTGCCACTGCCACTGGCGCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp GCGAGAGGCTTGGAGAGCTGCCTCCCTCCACACACCAGAGAGGAAGGCCTGAGCACAGCCACATGCAGCTaGTGTTGCACCTCGGCCCGA +
Preference number: 4 (lower is better)
Translates to: ARGLESCLPPHTREEGLSTATCS*CCTSAR
Trigger: TCGGGCCGAGGTGCAACACCAGCTGCATGTGGCTGT...GCTCAGGCCTTCCTCTCTGGTGTGTGGAGGGAGGCAGCTCTCCAAGCCTCTCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp AGGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTTGGGCTTGTTGGGCCTaGCAGTCAAGGTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: RHGRTQEGTLRALGPPDPWACWA*QSRWAE
Trigger: CTCTGCCCACCTTGACTGCCAGGCCCAACAAGCCCA...AGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GCGCTAGAGCGGCGGCGAGCAACACAGGGGCTGGAGCTGGAGCCAGTGCAGGAGCCCAAAAACCTGGGCTaGGTCGACAGTTTCACACAC +
Preference number: 4 (lower is better)
Translates to: ALERRRATQGLELEPVQEPKNLG*VDSFTH
Trigger: GTGTGTGAAACTGTCGACCCAGCCCAGGTTTTTGGG...CTCCTGCACTGGCTCCAGCTCCAGCCCCTGTGTTGCTCGCCGCCGCTCTAGCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR TCA 90 bp GGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTCCGGGATCCCACAGCTaGATCCCCATCATCCTTCTT +
Preference number: 4 (lower is better)
Translates to: GRTQEGTLRALGPPDPAGPGSHS*IPIILL
Trigger: AAGAAGGATGATGGGGATTCAGCTGTGGGATCCCGG...ACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp CCCTCAGAGGCCACTGCGAGTGGTAGTAGCAGCAACAGCGTCAGGGCACAGGGTGCTGGAAGGCCTGATTaGGGTGGCCCTGCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: PSEATASGSSSNSVRAQGAGRPD*GGPAAV
Trigger: TACTGCAGCAGGGCCACCTCAATCAGGCCTTCCAGC...ACCCTGTGCCCTGACGCTGTTGCTGCTACTACCACTCGCAGTGGCCTCTGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp GGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTAGTATGTCCCGCAGATaGTGCGTGGCGTCCTCAATG +
Preference number: 4 (lower is better)
Translates to: GRTQEGTLRALGPPDPAGSMSRR*CVASSM
Trigger: CATTGAGGACGCCACGCAGCATCTGCGGGACATACT...ACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp TACGTGCCCTGGGCCCGCCTGACCCTGCTGGTTACCACAATCAGTAGAGCACTGTCAGCCCGATCCTCATaGAGCAGGGCCACTGTCGGG +
Preference number: 4 (lower is better)
Translates to: YVPWARLTLLVTTISRALSARSS*SRATVG
Trigger: CCCGACAGTGGCCCTGCTGCATGAGGATCGGGCTGA...CAGTGCTCTACTGATTGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGGCACGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp CCTCCCACCTGCCGGTACCTGCAGACAGTCTGTAGCTCGCCTCCTCGACCCATGCAGCTGTTAGAGAGCTaGTGCTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PPTCRYLQTVCSSPPRPMQLLES*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAGCTCTCTAACAGCTG...CATGGGTCGAGGAGGCGAGCTACAGACTGTCTGCAGGTACCGGCAGGTGGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp CCCGTGAGCCCTGCTGCATACCTCCCTCCACACACCAGAGAGGAAGGCCTGAGCAGGCTGCCATCTAGCTaGAGCTTGGGGCTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: PVSPAAYLPPHTREEGLSRLPSS*SLGLKV
Trigger: GACCTTGAGCCCCAAGCTGCAGCTAGATGGCAGCCT...GCTCAGGCCTTCCTCTCTGGTGTGTGGAGGGAGGTATGCAGCAGGGCTCACGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp CCCTGGGCCCGCCTGACCCTGCTGGTTACCACAATCAGTAGAGCACTGCCCGTGAGGCTGCCATCTAGCTaGAGCTTGGGGCTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: PWARLTLLVTTISRALPVRLPSS*SLGLKV
Trigger: GACCTTGAGCCCCAAGCTGCAGCTAGATGGCAGCCT...CACGGGCAGTGCTCTACTGATTGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp CAGAGGCCACTGCGAGTGGTAGTAGCAGCAACAGCGTCAGGGCACAGGGTAGCCCCTGCAGGCTGCTGCTaGTGCTGTTTAGCGTCAGGC +
Preference number: 4 (lower is better)
Translates to: QRPLRVVVAATASGHRVAPAGCC*CCLASG
Trigger: GCCTGACGCTAAACAGCAGCAGCAGCAGCCTGCAGG...GGCTACCCTGTGCCCTGACGCTGTTGCTGCTACTACCACTCGCAGTGGCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp AGTGCAGGAGCTGTGGCCCGTAGTGTCTCCTGGTTGGTCTCTGGGCCAGCAATCCCAAGCTCAGGGCCTTaGCTGGGCCGAGGAGAGAGT +
Preference number: 4 (lower is better)
Translates to: SAGAVARSVSWLVSGPAIPSSGP*LGRGES
Trigger: ACTCTCTCCTCGGCCCAGGCAAGGCCCTGAGCTTGG...GATTGCTGGCCCAGAGACCAACCAGGAGACACTACGGGCCACAGCTCCTGCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp CCCTCAGAGGCCACTGCGAGTGGTAGTAGCAGCAACAGCGTCAGGGCACAGGGTGTCTTCAGGGGGCTCTaGCACCTGGTGCTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: PSEATASGSSSNSVRAQGVFRGL*HLVLCE
Trigger: CTCACAGAGCACCAGGTGGCAGAGCCCCCTGAAGAC...ACCCTGTGCCCTGACGCTGTTGCTGCTACTACCACTCGCAGTGGCCTCTGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp GGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACACTGCCCCTCAGCCAGTaGCCGTTCCAGCCGCCGTTG +
Preference number: 4 (lower is better)
Translates to: GVTILGSRFRHGRTQEGTLPLSQ*PFQPPL
Trigger: CAACGGCGGCTGGAACGGGCACTGGCTGAGGGGCAG...TGTGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp GCGCCACAGAGGATGTGCAAATTATCTGGGTGTGGGGCGCGGCGAGCTTCTTGCTGCTCGGTGGCACTCTaGAGTGTGCTGACCAGGCCC +
Preference number: 4 (lower is better)
Translates to: APQRMCKLSGCGARRASCCSVAL*SVLTRP
Trigger: GGGCCTGGTCAGCACACTGCAGAGTGCCACCGAGCA...GCAAGAAGCTCGCCGCGCCCCACACCCAGATAATTTGCACATCCTCTGTGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp TATCTGGGTGTGGGGCGCGGCGAGCTTCTTGCTGCAGTGACTCCCACACTGCAGACAGTGGCCGCCATCTaGTCGGTGGCACTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: YLGVGRGELLAAVTPTLQTVAAI*SVALCS
Trigger: ACTGCAGAGTGCCACCGAGCAGATGGCGGCCACTGT...CTGCAGTGTGGGAGTCACTGCAGCAAGAAGCTCGCCGCGCCCCACACCCAGATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp AGGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTACATGCAGCTGGTGTTaGACCTCGGCCCGAACACTG +
Preference number: 4 (lower is better)
Translates to: RHGRTQEGTLRALGPPDPTCSWC*TSARTL
Trigger: CAGTGTTCGGGCCGAGGTGCAACACCAGCTGCATGT...AGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp GCCCGTAGTGTCTCCTGGTTGGTCTCTGGGCCAGCAATCCGCTCCCGAACACTCCTGCCCACAGCCACATaGAGCTGGTGTTGCACCTCG +
Preference number: 4 (lower is better)
Translates to: ARSVSWLVSGPAIRSRTLLPTAT*SWCCTS
Trigger: CGAGGTGCAACACCAGCTGCATGTGGCTGTGGGCAG...GAGTGTTCGGGAGCGGATTGCTGGCCCAGAGACCAACCAGGAGACACTACGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp GGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTTTGACTCCTGCAAGCTaGCCACAGCCACATGCAGCT +
Preference number: 4 (lower is better)
Translates to: GRTQEGTLRALGPPDPAGLTPAS*PQPHAA
Trigger: AGCTGCATGTGGCTGTGGGCAGCTTGCAGGAGTCAA...ACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp ACACTCACAGGAGCGCCACAGAGGATGTGCAAATTATCTGGGTGTGGGGCGCGGCTGCCCCTCAGCCAGTaGCCGTTCCAGCCGCCGTTT +
Preference number: 4 (lower is better)
Translates to: TLTGAPQRMCKLSGCGARLPLSQ*PFQPPF
Trigger: AAACGGCGGCTGGAACGGGCACTGGCTGAGGGGCAG...CCGCGCCCCACACCCAGATAATTTGCACATCCTCTGTGGCGCTCCTGTGAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp GGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCAGGCAGGCGAGCTGTaGAGAGTTGAGGTGTGCAAA +
Preference number: 4 (lower is better)
Translates to: GMVGPKKAHYVPWARLTLQAGEL*RVEVCK
Trigger: TTTGCACACCTCAACTCTCCACAGCTCGCCTGCCTG...CAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp CCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTTACCACAGCAAGGAAGGGTCCATaGCTGAGGAGCTGCTCACAG +
Preference number: 4 (lower is better)
Translates to: PKKAHYVPWARLTLLVTTARKGP*LRSCSQ
Trigger: CTGTGAGCAGCTCCTCAGCCATGGACCCTTCCTTGC...TGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp AGTGCAGGAGCTGTGGCCCGTAGTGTCTCCTGGTTGGTCTCTGGGCCAGCAATCGCTCAGGGCCTTGCCTaGGCCGAGGAGAGAGTAGGT +
Preference number: 4 (lower is better)
Translates to: SAGAVARSVSWLVSGPAIAQGLA*AEERVG
Trigger: ACCTACTCTCTCCTCGGCCCAGGCAAGGCCCTGAGC...GATTGCTGGCCCAGAGACCAACCAGGAGACACTACGGGCCACAGCTCCTGCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp CCCGTGAGCCCTGCTGCATACCTCCCTCCACACACCAGAGAGGAAGGCCTGAGCCCTGGAGGCCATTCCTaGGGCTTTCTGTCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: PVSPAAYLPPHTREEGLSPGGHS*GFLSVC
Trigger: GCACACTGACAGAAAGCCCCAGGAATGGCCTCCAGG...GCTCAGGCCTTCCTCTCTGGTGTGTGGAGGGAGGTATGCAGCAGGGCTCACGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040254.16
CDS-3UTR TCA 90 bp GGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTCCAGAGAGGCAAATaGCCTGCTTTTCCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: GMVGPKKAHYVPWARLTLLQRGK*PAFPAG
Trigger: ACCTGCAGGAAAAGCAGGTCATTTGCCTCTCTGGAG...CAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp GCGCTAGAGCGGCGGCGAGCAACACAGGGGCTGGAGCTGGAGCCAGTGCAGGAGAGATCTGCCAGAACTTaGCAAAGCCATCATGGCTTG +
Preference number: 4 (lower is better)
Translates to: ALERRRATQGLELEPVQERSART*QSHHGL
Trigger: CAAGCCATGATGGCTTTGTCAAGTTCTGGCAGATCT...CTCCTGCACTGGCTCCAGCTCCAGCCCCTGTGTTGCTCGCCGCCGCTCTAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR TCA 90 bp GGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGGAGACTCTCCAAATGTaGAGTCCTCGTGGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: GMVGPKKAHYVPWARLTLETLQM*SPRGQC
Trigger: ACACTGCCCACGAGGACTTCACATTTGGAGAGTCTC...CAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp GCGCCACAGAGGATGTGCAAATTATCTGGGTGTGGGGCGCGGCGAGCTTCTTGCGGAAGGGTCCATGGCTaGGGAGCTGCTCACAGCAGA +
Preference number: 4 (lower is better)
Translates to: APQRMCKLSGCGARRASCGRVHG*GAAHSR
Trigger: TCTGCTGTGAGCAGCTCCTCAGCCATGGACCCTTCC...GCAAGAAGCTCGCCGCGCCCCACACCCAGATAATTTGCACATCCTCTGTGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR TCA 90 bp GCCCGTAGTGTCTCCTGGTTGGTCTCTGGGCCAGCAATCCGCTCCCGAACACTCGCCGTAGGCCAGACTTaGCTGTCAGGGGTTGCAACT +
Preference number: 4 (lower is better)
Translates to: ARSVSWLVSGPAIRSRTLAVGQT*LSGVAT
Trigger: AGTTGCAACCCCTGACAGTCAAGTCTGGCCTACGGC...GAGTGTTCGGGAGCGGATTGCTGGCCCAGAGACCAACCAGGAGACACTACGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR TCA 90 bp AGGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTCCGGGATCCCACAGCTaGATCCCCATCATCCTTCTT +
Preference number: 4 (lower is better)
Translates to: RHGRTQEGTLRALGPPDPPGSHS*IPIILL
Trigger: AAGAAGGATGATGGGGATTCAGCTGTGGGATCCCGG...AGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp GGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACACACTCTGCAGTGTGCTaGCCAGGCCCCGAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GVTILGSRFRHGRTQEGTHSAVC*PGPEAG
Trigger: CCCAGCTTCGGGGCCTGGTCAGCACACTGCAGAGTG...TGTGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp GCCCGTAGTGTCTCCTGGTTGGTCTCTGGGCCAGCAATCCGCTCCCGAACACTCATGTCCCGCAGATGCTaGGTGGCGTCCTCAATGTCG +
Preference number: 4 (lower is better)
Translates to: ARSVSWLVSGPAIRSRTLMSRRC*VASSMS
Trigger: CGACATTGAGGACGCCACGCAGCATCTGCGGGACAT...GAGTGTTCGGGAGCGGATTGCTGGCCCAGAGACCAACCAGGAGACACTACGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp AGGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTAGTATGTCCCGCAGATaGTGCGTGGCGTCCTCAATG +
Preference number: 4 (lower is better)
Translates to: RHGRTQEGTLRALGPPDPSMSRR*CVASSM
Trigger: CATTGAGGACGCCACGCAGCATCTGCGGGACATACT...AGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp GCGCTAGAGCGGCGGCGAGCAACACAGGGGCTGGAGCTGGAGCCAGTGCAGGAGCTTCACTTAGGCACGTaGTATGGCCTTTCACCACAA +
Preference number: 4 (lower is better)
Translates to: ALERRRATQGLELEPVQELHLGT*YGLSPQ
Trigger: TTGTGGTGAAAGGCCATAGCACGTGCCTAAGTGAAG...CTCCTGCACTGGCTCCAGCTCCAGCCCCTGTGTTGCTCGCCGCCGCTCTAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp GTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCAGGCAGGACCTCAGTGTaGCGTAGCCGGCAGCGACTG +
Preference number: 4 (lower is better)
Translates to: VVSRSWGHASGMVGPKKAGRTSV*RSRQRL
Trigger: CAGTCGCTGCCGGCTACGGCACACTGAGGTCCTGCC...TGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp AGGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTCAGACTGAGGAAGTCTaGAGGAGCAGGCAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: RHGRTQEGTLRALGPPDPQTEEV*RSRQFH
Trigger: GTGGAACTGCCTGCTCCTGCAGACTTCCTCAGTCTG...AGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp AGCACTGCCCGTGAGCCCTGCTGCATACCTCCCTCCACACACCAGAGAGGAAGGGGGGATGCAGAGATCTaGTGCAGGGAGGCAGTAGGT +
Preference number: 4 (lower is better)
Translates to: STAREPCCIPPSTHQRGRGDAEI*CREAVG
Trigger: ACCTACTGCCTCCCTGCAGCAGATCTCTGCATCCCC...CCTTCCTCTCTGGTGTGTGGAGGGAGGTATGCAGCAGGGCTCACGGGCAGTGCT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp GTGCAGGAGCTGTGGCCCGTAGTGTCTCCTGGTTGGTCTCTGGGCCAGCAATCCGGGGATGCAGAGATCTaGTGCAGGGAGGCAGTAGGT +
Preference number: 4 (lower is better)
Translates to: VQELWPVVSPGWSLGQQSGDAEI*CREAVG
Trigger: ACCTACTGCCTCCCTGCAGCAGATCTCTGCATCCCC...GGATTGCTGGCCCAGAGACCAACCAGGAGACACTACGGGCCACAGCTCCTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp CCCTGGGCCCGCCTGACCCTGCTGGTTACCACAATCAGTAGAGCACTGCCCGTGAGGGAAGGGGTACTATaGCTATCCCCATCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: PWARLTLLVTTISRALPVREGVL*LSPSPG
Trigger: CCCTGGAGATGGGGATAGGCATAGTACCCCTTCCCT...CACGGGCAGTGCTCTACTGATTGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp CTGTGGCCCGTAGTGTCTCCTGGTTGGTCTCTGGGCCAGCAATCCGCTCCCGAAACATGCAGCTGGTGTTaGACCTCGGCCCGAACACTG +
Preference number: 4 (lower is better)
Translates to: LWPVVSPGWSLGQQSAPETCSWC*TSARTL
Trigger: CAGTGTTCGGGCCGAGGTGCAACACCAGCTGCATGT...TTCGGGAGCGGATTGCTGGCCCAGAGACCAACCAGGAGACACTACGGGCCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp CCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTTACCACATTGACTCCTGCAAGCTaGCCACAGCCACATGCAGCT +
Preference number: 4 (lower is better)
Translates to: PKKAHYVPWARLTLLVTTLTPAS*PQPHAA
Trigger: AGCTGCATGTGGCTGTGGGCAGCTTGCAGGAGTCAA...TGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp CCCGTGAGCCCTGCTGCATACCTCCCTCCACACACCAGAGAGGAAGGCCTGAGCCAGGCAGGCGAGCTGTaGAGAGTTGAGGTGTGCAAA +
Preference number: 4 (lower is better)
Translates to: PVSPAAYLPPHTREEGLSQAGEL*RVEVCK
Trigger: TTTGCACACCTCAACTCTCCACAGCTCGCCTGCCTG...GCTCAGGCCTTCCTCTCTGGTGTGTGGAGGGAGGTATGCAGCAGGGCTCACGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GCGAGAGGCTTGGAGAGCTGCCTCCCTCCACACACCAGAGAGGAAGGCCTGAGCACAGGCCAGGTGTTGTaGCTGGAGCGAAGCATATCC +
Preference number: 4 (lower is better)
Translates to: ARGLESCLPPHTREEGLSTGQVL*LERSIS
Trigger: GGATATGCTTCGCTCCAGCCACAACACCTGGCCTGT...GCTCAGGCCTTCCTCTCTGGTGTGTGGAGGGAGGCAGCTCTCCAAGCCTCTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp AGGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTAAGCTCAGCACAGGGTaGGTGAGCAGGAACTCAGAG +
Preference number: 4 (lower is better)
Translates to: RHGRTQEGTLRALGPPDPKLSTG*VSRNSE
Trigger: CTCTGAGTTCCTGCTCACCCACCCTGTGCTGAGCTT...AGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GCCCGTAGTGTCTCCTGGTTGGTCTCTGGGCCAGCAATCCGCTCCCGAACACTCAAGGCTCCAGCTCCATaGGAACTCTCGGTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: ARSVSWLVSGPAIRSRTLKAPAP*ELSVPR
Trigger: TCTGGGGACCGAGAGTTCCCATGGAGCTGGAGCCTT...GAGTGTTCGGGAGCGGATTGCTGGCCCAGAGACCAACCAGGAGACACTACGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp CCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTTACCACAGGGTTCAGCTGTGGCTaGAAGCGGATCTGCACATCT +
Preference number: 4 (lower is better)
Translates to: PKKAHYVPWARLTLLVTTGFSCG*KRICTS
Trigger: AGATGTGCAGATCCGCTTCCAGCCACAGCTGAACCC...TGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GTGCAGGAGCTGTGGCCCGTAGTGTCTCCTGGTTGGTCTCTGGGCCAGCAATCCGCAAGGAAGGGTCCATaGCTGAGGAGCTGCTCACAG +
Preference number: 4 (lower is better)
Translates to: VQELWPVVSPGWSLGQQSARKGP*LRSCSQ
Trigger: CTGTGAGCAGCTCCTCAGCCATGGACCCTTCCTTGC...GGATTGCTGGCCCAGAGACCAACCAGGAGACACTACGGGCCACAGCTCCTGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp TGGGCCAGCAATCCGCTCCCGAACACTCACAGGAGCGCCACAGAGGATGTGCAAGCTCCTCAGGTGGTCTaGGCAAGGAAGGGTCCATGG +
Preference number: 4 (lower is better)
Translates to: WASNPLPNTHRSATEDVQAPQVV*ARKGPW
Trigger: CCATGGACCCTTCCTTGCCCAGACCACCTGAGGAGC...TTGCACATCCTCTGTGGCGCTCCTGTGAGTGTTCGGGAGCGGATTGCTGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp GCGCCACAGAGGATGTGCAAATTATCTGGGTGTGGGGCGCGGCGAGCTTCTTGCGGTCAGCTCCTCAGGTaGTCTGGGCAAGGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: APQRMCKLSGCGARRASCGQLLR*SGQGRV
Trigger: GACCCTTCCTTGCCCAGACCACCTGAGGAGCTGACC...GCAAGAAGCTCGCCGCGCCCCACACCCAGATAATTTGCACATCCTCTGTGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp CTCGCCTCCTCGACCCATGCCATCCCCCAGGCGGATGAGACATTCAGCAAAGCCGTGCAGAGGCAGCAGTaGATACCTGACCAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: LASSTHAIPQADETFSKAVQRQQ*IPDQVP
Trigger: AGGGACCTGGTCAGGTATCCACTGCTGCCTCTGCAC...GGCTTTGCTGAATGTCTCATCCGCCTGGGGGATGGCATGGGTCGAGGAGGCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp GGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTCTTGGAAGGCAGCCGTaGAGTAGGAATTTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: GRTQEGTLRALGPPDPAGLGRQP*SRNFAA
Trigger: GGCAGCAAAATTCCTACTCCACGGCTGCCTTCCAAG...ACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCAGGGGGCTCTGCCACCTaGTGCTCTGTGAGCCGGGAT +
Preference number: 4 (lower is better)
Translates to: VVSRSWGHASGMVGPKKAGGSAT*CSVSRD
Trigger: ATCCCGGCTCACAGAGCACCAGGTGGCAGAGCCCCC...TGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGGCTGAAGACAATGCCTaGGATAGCTGCTGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: GMVGPKKAHYVPWARLTLAEDNA*DSCCVS
Trigger: GCTGACACAGCAGCTATCCCAGGCATTGTCTTCAGC...CAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp AGTGTCTCCTGGTTGGTCTCTGGGCCAGCAATCCGCTCCCGAACACTCACAGGAGCCTGGCAGTCAAGGTaGGCAGAGGGGACAGGTGTG +
Preference number: 4 (lower is better)
Translates to: SVSWLVSGPAIRSRTLTGAWQSR*AEGTGV
Trigger: CACACCTGTCCCCTCTGCCCACCTTGACTGCCAGGC...TCCTGTGAGTGTTCGGGAGCGGATTGCTGGCCCAGAGACCAACCAGGAGACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR TCA 90 bp AGGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGGTCCAAACAAACTTTaGGGCTGGGAGGCACACTCA +
Preference number: 4 (lower is better)
Translates to: RHGRTQEGTLRALGPPDPGPNKL*GWEAHS
Trigger: TGAGTGTGCCTCCCAGCCTCAAAGTTTGTTTGGACC...AGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp GCAAATTATCTGGGTGTGGGGCGCGGCGAGCTTCTTGCTGCAGTGACTCCCACATCAGGCTGGGAACCATaGGCAGCTGAAGCTAGCCCC +
Preference number: 4 (lower is better)
Translates to: ANYLGVGRGELLAAVTPTSGWEP*AAEASP
Trigger: GGGGCTAGCTTCAGCTGCTCATGGTTCCCAGCCTGA...TGTGGGAGTCACTGCAGCAAGAAGCTCGCCGCGCCCCACACCCAGATAATTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR TCA 90 bp AGCACTGCCCGTGAGCCCTGCTGCATACCTCCCTCCACACACCAGAGAGGAAGGTCTCACTGCTCAGACTaGGGAAGTCTGCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: STAREPCCIPPSTHQRGRSHCSD*GSLQEQ
Trigger: CTGCTCCTGCAGACTTCCTCAGTCTGAGCAGTGAGA...CCTTCCTCTCTGGTGTGTGGAGGGAGGTATGCAGCAGGGCTCACGGGCAGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp CTGTGGCCCGTAGTGTCTCCTGGTTGGTCTCTGGGCCAGCAATCCGCTCCCGAAGCAGCAGTGGATACCTaGCCAGGTCCCTTGGAAATC +
Preference number: 4 (lower is better)
Translates to: LWPVVSPGWSLGQQSAPEAAVDT*PGPLEI
Trigger: GATTTCCAAGGGACCTGGTCAGGTATCCACTGCTGC...TTCGGGAGCGGATTGCTGGCCCAGAGACCAACCAGGAGACACTACGGGCCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR TCA 90 bp GTGCAGGAGCTGTGGCCCGTAGTGTCTCCTGGTTGGTCTCTGGGCCAGCAATCCCCGGGATCCCACAGCTaGATCCCCATCATCCTTCTT +
Preference number: 4 (lower is better)
Translates to: VQELWPVVSPGWSLGQQSPGSHS*IPIILL
Trigger: AAGAAGGATGATGGGGATTCAGCTGTGGGATCCCGG...GGATTGCTGGCCCAGAGACCAACCAGGAGACACTACGGGCCACAGCTCCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR TCA 90 bp ATATGGTATCACAGCGGTTTGGGCCCTCAGAGGCCACTGCGAGTGGTAGTAGCACACTCTGCAGTGTGCTaGCCAGGCCCCGAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: IWYHSGLGPQRPLRVVVAHSAVC*PGPEAG
Trigger: CCCAGCTTCGGGGCCTGGTCAGCACACTGCAGAGTG...TGCTACTACCACTCGCAGTGGCCTCTGAGGGCCCAAACCGCTGTGATACCATAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR TCA 90 bp AGCACTGCCCGTGAGCCCTGCTGCATACCTCCCTCCACACACCAGAGAGGAAGGAGGTGTGCCAGCAGCTaGACGCATAGCCTGCATGAT +
Preference number: 4 (lower is better)
Translates to: STAREPCCIPPSTHQRGRRCASS*THSLHD
Trigger: ATCATGCAGGCTATGCGTTCAGCTGCTGGCACACCT...CCTTCCTCTCTGGTGTGTGGAGGGAGGTATGCAGCAGGGCTCACGGGCAGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp CACAGCGGTTTGGGCCCTCAGAGGCCACTGCGAGTGGTAGTAGCAGCAACAGCGAGGTGTGCCAGCAGCTaGACGCATAGCCTGCATGAT +
Preference number: 4 (lower is better)
Translates to: HSGLGPQRPLRVVVAATARCASS*THSLHD
Trigger: ATCATGCAGGCTATGCGTTCAGCTGCTGGCACACCT...CGCTGTTGCTGCTACTACCACTCGCAGTGGCCTCTGAGGGCCCAAACCGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp ATGTGCAAATTATCTGGGTGTGGGGCGCGGCGAGCTTCTTGCTGCAGTGACTCCCAGGCAGTTCCACAATaGGCCGCAGGTCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: MCKLSGCGARRASCCSDSQAVPQ*AAGQAG
Trigger: CCCAGCCTGACCTGCGGCGCATTGTGGAACTGCCTG...GGAGTCACTGCAGCAAGAAGCTCGCCGCGCCCCACACCCAGATAATTTGCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp AGGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTTGTTTAGCGTCAGGCTaGCATCTAGCTGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: RHGRTQEGTLRALGPPDPCLASG*HLAAAW
Trigger: CCAAGCTGCAGCTAGATGGCAGCCTGACGCTAAACA...AGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp AGTGTCTCCTGGTTGGTCTCTGGGCCAGCAATCCGCTCCCGAACACTCACAGGAGCAGGCTGCTGCTGCTaGTGTTTAGCGTCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SVSWLVSGPAIRSRTLTGAGCCC*CLASGC
Trigger: GCAGCCTGACGCTAAACAGCAGCAGCAGCAGCCTGC...TCCTGTGAGTGTTCGGGAGCGGATTGCTGGCCCAGAGACCAACCAGGAGACACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp CCTCCCACCTGCCGGTACCTGCAGACAGTCTGTAGCTCGCCTCCTCGACCCATGGGACAGGGCCTCAGATaGGATTTCAGGAATGTCCTG +
Preference number: 4 (lower is better)
Translates to: PPTCRYLQTVCSSPPRPMGQGLR*DFRNVL
Trigger: CAGGACATTCCTGAAATCGCATCTGAGGCCCTGTCC...CATGGGTCGAGGAGGCGAGCTACAGACTGTCTGCAGGTACCGGCAGGTGGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp GGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTACGAGTAATGTCAGGTaGCGTAGGCCAGACTTGACT +
Preference number: 4 (lower is better)
Translates to: GRTQEGTLRALGPPDPAGTSNVR*RRPDLT
Trigger: AGTCAAGTCTGGCCTACGGCACCTGACATTACTCGT...ACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp CCCTGGGCCCGCCTGACCCTGCTGGTTACCACAATCAGTAGAGCACTGCCCGTGGCCAGCTCTCTTTGCTaGTGCCAAATTAGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: PWARLTLLVTTISRALPVASSLC*CQISAG
Trigger: GCCAGCACTAATTTGGCAGCAGCAAAGAGAGCTGGC...CACGGGCAGTGCTCTACTGATTGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp AGGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCCAGCTCTCTTTGCTaGTGCCAAATTAGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: RHGRTQEGTLRALGPPDPASSLC*CQISAG
Trigger: GCCAGCACTAATTTGGCAGCAGCAAAGAGAGCTGGC...AGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp TGGGCCAGCAATCCGCTCCCGAACACTCACAGGAGCGCCACAGAGGATGTGCAATTTCATCCCTTACGCTaGGCTCTAGCCGCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: WASNPLPNTHRSATEDVQFHPLR*ALAAQP
Trigger: TGGCTGGGCGGCTAGAGCGCAGCGTAAGGGATGAAA...TTGCACATCCTCTGTGGCGCTCCTGTGAGTGTTCGGGAGCGGATTGCTGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp GTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACACTGCTCGGTGGCACTCTaGAGTGTGCTGACCAGGCCC +
Preference number: 4 (lower is better)
Translates to: VSRSWGHASGMVGPKKAHCSVAL*SVLTRP
Trigger: GGGCCTGGTCAGCACACTGCAGAGTGCCACCGAGCA...GTGTGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp CCCTGGGCCCGCCTGACCCTGCTGGTTACCACAATCAGTAGAGCACTGCCCGTGGCTAAGATTGACTCCTaGAAGCTGCCCACAGCCACA +
Preference number: 4 (lower is better)
Translates to: PWARLTLLVTTISRALPVAKIDS*KLPTAT
Trigger: TGTGGCTGTGGGCAGCTTGCAGGAGTCAATCTTAGC...CACGGGCAGTGCTCTACTGATTGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp GGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTCTGCTGCTCCTTAAGTaGCACACTCACTTCACCCTT +
Preference number: 4 (lower is better)
Translates to: GRTQEGTLRALGPPDPAGLLLLK*HTHFTL
Trigger: AAGGGTGAAGTGAGTGTGGCACTTAAGGAGCAGCAG...ACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp GGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCCCTGCTGCAGTAACTaGAAGATATGGGCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: GMVGPKKAHYVPWARLTLPCCSN*KIWACW
Trigger: CCAACAAGCCCATATCTTGCAGTTACTGCAGCAGGG...CAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp CCCGTGAGCCCTGCTGCATACCTCCCTCCACACACCAGAGAGGAAGGCCTGAGCATCAGCAGCAGTCAGTaGCTGCTGGAAGGCCTGATT +
Preference number: 4 (lower is better)
Translates to: PVSPAAYLPPHTREEGLSISSSQ*LLEGLI
Trigger: AATCAGGCCTTCCAGCAGGCACTGACTGCTGCTGAT...GCTCAGGCCTTCCTCTCTGGTGTGTGGAGGGAGGTATGCAGCAGGGCTCACGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp CCCGAACACTCACAGGAGCGCCACAGAGGATGTGCAAATTATCTGGGTGTGGGGAGTGGACAGGGCGGCTaGCCAAAAACCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PEHSQERHRGCANYLGVGSGQGG*PKTWAG
Trigger: CCCAGCCCAGGTTTTTGGGCAGCCGCCCTGTCCACT...CCCCACACCCAGATAATTTGCACATCCTCTGTGGCGCTCCTGTGAGTGTTCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp CCCGTGAGCCCTGCTGCATACCTCCCTCCACACACCAGAGAGGAAGGCCTGAGCTCGCTGTGGTCCAGGTaGATCACAGCTTCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: PVSPAAYLPPHTREEGLSSLWSR*ITASSK
Trigger: CTTGGAAGAAGCTGTGATGCACCTGGACCACAGCGA...GCTCAGGCCTTCCTCTCTGGTGTGTGGAGGGAGGTATGCAGCAGGGCTCACGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp CCTCCCACCTGCCGGTACCTGCAGACAGTCTGTAGCTCGCCTCCTCGACCCATGTCGCTGTGGTCCAGGTaGATCACAGCTTCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: PPTCRYLQTVCSSPPRPMSLWSR*ITASSK
Trigger: CTTGGAAGAAGCTGTGATGCACCTGGACCACAGCGA...CATGGGTCGAGGAGGCGAGCTACAGACTGTCTGCAGGTACCGGCAGGTGGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp GCGCCACAGAGGATGTGCAAATTATCTGGGTGTGGGGCGCGGCGAGCTTCTTGCAGCCGCCGTTTACCATaGTGTGCCACTACCCCAAGG +
Preference number: 4 (lower is better)
Translates to: APQRMCKLSGCGARRASCSRRLP*CATTPR
Trigger: CCTTGGGGTAGTGGCACAGCATGGTAAACGGCGGCT...GCAAGAAGCTCGCCGCGCCCCACACCCAGATAATTTGCACATCCTCTGTGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp GGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTAAGCCTTGCTTGATTTaGCTGACATCCACAGGCCAG +
Preference number: 4 (lower is better)
Translates to: GRTQEGTLRALGPPDPAGKPCLI*LTSTGQ
Trigger: CTGGCCTGTGGATGTCAGCCAAATCAAGCAAGGCTT...ACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp CTCGCCTCCTCGACCCATGCCATCCCCCAGGCGGATGAGACATTCAGCAAAGCCAAGCTCAGCACAGGGTaGGTGAGCAGGAACTCAGAG +
Preference number: 4 (lower is better)
Translates to: LASSTHAIPQADETFSKAKLSTG*VSRNSE
Trigger: CTCTGAGTTCCTGCTCACCCACCCTGTGCTGAGCTT...GGCTTTGCTGAATGTCTCATCCGCCTGGGGGATGGCATGGGTCGAGGAGGCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp TATCTGGGTGTGGGGCGCGGCGAGCTTCTTGCTGCAGTGACTCCCACACTGCAGGGGTTCAGCTGTGGCTaGAAGCGGATCTGCACATCT +
Preference number: 4 (lower is better)
Translates to: YLGVGRGELLAAVTPTLQGFSCG*KRICTS
Trigger: AGATGTGCAGATCCGCTTCCAGCCACAGCTGAACCC...CTGCAGTGTGGGAGTCACTGCAGCAAGAAGCTCGCCGCGCCCCACACCCAGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp GGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACATCCTCGTGGGCAGTGTaGGTAGAGAGTGGGGCCACC +
Preference number: 4 (lower is better)
Translates to: GVTILGSRFRHGRTQEGTSSWAV*VESGAT
Trigger: GGTGGCCCCACTCTCTACCCACACTGCCCACGAGGA...TGTGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACACTCCTCGTGGGCAGTGTaGGTAGAGAGTGGGGCCACC +
Preference number: 4 (lower is better)
Translates to: VSRSWGHASGMVGPKKAHSSWAV*VESGAT
Trigger: GGTGGCCCCACTCTCTACCCACACTGCCCACGAGGA...GTGTGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GGCAGCCTCCCACCTGCCGGTACCTGCAGACAGTCTGTAGCTCGCCTCCTCGACAATGTGAAGTCCTCGTaGGCAGTGTGGGTAGAGAGT +
Preference number: 4 (lower is better)
Translates to: GSLPPAGTCRQSVARLLDNVKSS*AVWVES
Trigger: ACTCTCTACCCACACTGCCCACGAGGACTTCACATT...GTCGAGGAGGCGAGCTACAGACTGTCTGCAGGTACCGGCAGGTGGGAGGCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp GGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCCTGACCAGGTCCCTTaGAAATCAACTTGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: GMVGPKKAHYVPWARLTLPDQVP*KSTCQL
Trigger: CAGCTGACAAGTTGATTTCCAAGGGACCTGGTCAGG...CAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACAGCTCAGGGCCTTGCCTaGGCCGAGGAGAGAGTAGGT +
Preference number: 4 (lower is better)
Translates to: GVTILGSRFRHGRTQEGTAQGLA*AEERVG
Trigger: ACCTACTCTCTCCTCGGCCCAGGCAAGGCCCTGAGC...TGTGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp TATCTGGGTGTGGGGCGCGGCGAGCTTCTTGCTGCAGTGACTCCCACACTGCAGGGCTGCCCAAAAACCTaGGCTGGGTCGACAGTTTCA +
Preference number: 4 (lower is better)
Translates to: YLGVGRGELLAAVTPTLQGCPKT*AGSTVS
Trigger: TGAAACTGTCGACCCAGCCCAGGTTTTTGGGCAGCC...CTGCAGTGTGGGAGTCACTGCAGCAAGAAGCTCGCCGCGCCCCACACCCAGATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp CCCTCAGAGGCCACTGCGAGTGGTAGTAGCAGCAACAGCGTCAGGGCACAGGGTGTGATGGGATCGCTGTaGTCCAGGTGCATCACAGCT +
Preference number: 4 (lower is better)
Translates to: PSEATASGSSSNSVRAQGVMGSL*SRCITA
Trigger: AGCTGTGATGCACCTGGACCACAGCGATCCCATCAC...ACCCTGTGCCCTGACGCTGTTGCTGCTACTACCACTCGCAGTGGCCTCTGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp AGGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTATGACAGAGCCCATGTaGTCTCGAGTGATGGGATCG +
Preference number: 4 (lower is better)
Translates to: RHGRTQEGTLRALGPPDPMTEPM*SRVMGS
Trigger: CGATCCCATCACTCGAGACCACATGGGCTCTGTCAT...AGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp AGCACTGCCCGTGAGCCCTGCTGCATACCTCCCTCCACACACCAGAGAGGAAGGGCACACTCACTGAGCTaGAGATATCTGGGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: STAREPCCIPPSTHQRGRAHSLS*RYLGRS
Trigger: GCTTCTCCCCAGATATCTTCAGCTCAGTGAGTGTGC...CCTTCCTCTCTGGTGTGTGGAGGGAGGTATGCAGCAGGGCTCACGGGCAGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp GGCGCCAGTGGCAGTGGCAGCAGTTGCACATCATCCCTGGCTGTAAGCCTAGTGGGGAGGCACACTCACTaGGCTGAAGATATCTGGGGA +
Preference number: 4 (lower is better)
Translates to: GASGSGSSCTSSLAVSLVGRHTH*AEDIWG
Trigger: TCCCCAGATATCTTCAGCTCAGTGAGTGTGCCTCCC...CACTAGGCTTACAGCCAGGGATGATGTGCAACTGCTGCCACTGCCACTGGCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR TCA 90 bp CCCGAACACTCACAGGAGCGCCACAGAGGATGTGCAAATTATCTGGGTGTGGGGGTAGCCGGCAGCGACTaGCAACCTGGATGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: PEHSQERHRGCANYLGVGVAGSD*QPGCQS
Trigger: GCTTTGGCATCCAGGTTGTCAGTCGCTGCCGGCTAC...CCCCACACCCAGATAATTTGCACATCCTCTGTGGCGCTCCTGTGAGTGTTCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR TCA 90 bp TTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCCACCTGGTGCTCTGTaGGCCGGGATCCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: FNSSGVTILGSRFRHGRTPPGAL*AGIPQL
Trigger: CAGCTGTGGGATCCCGGCTCACAGAGCACCAGGTGG...GGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp AGGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTTCTGTGACAGTACTCTaGAGACCTTCAAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: RHGRTQEGTLRALGPPDPSVTVL*RPSSWA
Trigger: TGCCCAGCTTGAAGGTCTTCAGAGTACTGTCACAGA...AGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp CCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTTACCACACATACAGCACCAGATTaGGATCAGCAGCAGTCAGTG +
Preference number: 4 (lower is better)
Translates to: PKKAHYVPWARLTLLVTTHTAPD*DQQQSV
Trigger: CACTGACTGCTGCTGATCTCAATCTGGTGCTGTATG...TGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp GGCAGCCTCCCACCTGCCGGTACCTGCAGACAGTCTGTAGCTCGCCTCCTCGACATGACCTGCTTTTCCTaGAGGTTAATGGGTGGCATG +
Preference number: 4 (lower is better)
Translates to: GSLPPAGTCRQSVARLLDMTCFS*RLMGGM
Trigger: CATGCCACCCATTAACCTGCAGGAAAAGCAGGTCAT...GTCGAGGAGGCGAGCTACAGACTGTCTGCAGGTACCGGCAGGTGGGAGGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp GGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTTGGCTAAAATCCCAATaGAGGTGGAGCTGTCATCTC +
Preference number: 4 (lower is better)
Translates to: GRTQEGTLRALGPPDPAGWLKSQ*RWSCHL
Trigger: GAGATGACAGCTCCACCTGCATTGGGATTTTAGCCA...ACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp GGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGAGCCCTAATGGCGTATaGCAAGAAGGAGTTAGACAC +
Preference number: 4 (lower is better)
Translates to: GMVGPKKAHYVPWARLTLSPNGV*QEGVRH
Trigger: GTGTCTAACTCCTTCTTGGCATACGCCATTAGGGCT...CAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp CAGAGGCCACTGCGAGTGGTAGTAGCAGCAACAGCGTCAGGGCACAGGGTAGCCTGTTTAGCGTCAGGCTaGCATCTAGCTGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: QRPLRVVVAATASGHRVACLASG*HLAAAW
Trigger: CCAAGCTGCAGCTAGATGGCAGCCTGACGCTAAACA...GGCTACCCTGTGCCCTGACGCTGTTGCTGCTACTACCACTCGCAGTGGCCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp GTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACACCCTGCAGGCTGCTGCTaGTGCTGTTTAGCGTCAGGC +
Preference number: 4 (lower is better)
Translates to: VSRSWGHASGMVGPKKAHPAGCC*CCLASG
Trigger: GCCTGACGCTAAACAGCAGCAGCAGCAGCCTGCAGG...GTGTGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp CCCGTGAGCCCTGCTGCATACCTCCCTCCACACACCAGAGAGGAAGGCCTGAGCACGAGTAATGTCAGGTaGCGTAGGCCAGACTTGACT +
Preference number: 4 (lower is better)
Translates to: PVSPAAYLPPHTREEGLSTSNVR*RRPDLT
Trigger: AGTCAAGTCTGGCCTACGGCACCTGACATTACTCGT...GCTCAGGCCTTCCTCTCTGGTGTGTGGAGGGAGGTATGCAGCAGGGCTCACGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp AGTGCAGGAGCGAGAGGCTTGGAGAGCTGCCTCCCTCCACACACCAGAGAGGAAAATGCCTGGGATAGCTaGTGTGTCAGCTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SAGARGLESCLPPHTREENAWDS*CVSCSC
Trigger: GCAGGAGCAGCTGACACAGCAGCTATCCCAGGCATT...TTCCTCTCTGGTGTGTGGAGGGAGGCAGCTCTCCAAGCCTCTCGCTCCTGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp CACAGCGGTTTGGGCCCTCAGAGGCCACTGCGAGTGGTAGTAGCAGCAACAGCGGCTGAACGCATAGCCTaGATGATGCTGGAAGTGACG +
Preference number: 4 (lower is better)
Translates to: HSGLGPQRPLRVVVAATAAERIA*MMLEVT
Trigger: CGTCACTTCCAGCATCATGCAGGCTATGCGTTCAGC...CGCTGTTGCTGCTACTACCACTCGCAGTGGCCTCTGAGGGCCCAAACCGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp CCCTGGGCCCGCCTGACCCTGCTGGTTACCACAATCAGTAGAGCACTGCCCGTGTTGAGGTGGCCCTGCTaGAGTAACTGCAAGATATGG +
Preference number: 4 (lower is better)
Translates to: PWARLTLLVTTISRALPVLRWPC*SNCKIW
Trigger: CCATATCTTGCAGTTACTGCAGCAGGGCCACCTCAA...CACGGGCAGTGCTCTACTGATTGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp GGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGAGGTCAGATGCTAGCTaGTGGATTAGGGAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: GMVGPKKAHYVPWARLTLRSDAS*WIRERR
Trigger: TCTCCTTTCCCTAATCCAGCAGCTAGCATCTGACCT...CAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp CCCTGGGCCCGCCTGACCCTGCTGGTTACCACAATCAGTAGAGCACTGCCCGTGTTGTGTGGATCAGCCTaGAGGAACTGGAAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: PWARLTLLVTTISRALPVLCGSA*RNWKSF
Trigger: GAAGCTCTTCCAGTTCCTGCAGGCTGATCCACACAA...CACGGGCAGTGCTCTACTGATTGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp AGGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTTTGTGTGGATCAGCCTaGAGGAACTGGAAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: RHGRTQEGTLRALGPPDPLCGSA*RNWKSF
Trigger: GAAGCTCTTCCAGTTCCTGCAGGCTGATCCACACAA...AGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp AGCACTGCCCGTGAGCCCTGCTGCATACCTCCCTCCACACACCAGAGAGGAAGGGCACTGGATGGCCTTTaGCTTTCGGCATTGGAACCT +
Preference number: 4 (lower is better)
Translates to: STAREPCCIPPSTHQRGRALDGL*LSALEP
Trigger: AGGTTCCAATGCCGAAAGCCAAAGGCCATCCAGTGC...CCTTCCTCTCTGGTGTGTGGAGGGAGGTATGCAGCAGGGCTCACGGGCAGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp CACAGCGGTTTGGGCCCTCAGAGGCCACTGCGAGTGGTAGTAGCAGCAACAGCGCTGCAGGTTAATGGGTaGCATGGTCCGTATACCAGG +
Preference number: 4 (lower is better)
Translates to: HSGLGPQRPLRVVVAATALQVNG*HGPYTR
Trigger: CCTGGTATACGGACCATGCCACCCATTAACCTGCAG...CGCTGTTGCTGCTACTACCACTCGCAGTGGCCTCTGAGGGCCCAAACCGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp GGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGAAATCCCAATGCAGGTaGAGCTGTCATCTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: GMVGPKKAHYVPWARLTLKSQCR*SCHLQR
Trigger: TCTCTGGAGATGACAGCTCCACCTGCATTGGGATTT...CAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp TTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCGCGCGGCCCTCGTCCTaGTTCTGCAGCAGCTCCATC +
Preference number: 4 (lower is better)
Translates to: FNSSGVTILGSRFRHGRTARPSS*FCSSSI
Trigger: GATGGAGCTGCTGCAGAACCAGGACGAGGGCCGCGC...GGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp TCAGCAAAGCCTTGGTATATGGTATCACAGCGGTTTGGGCCCTCAGAGGCCACTGCGCGGCCCTCGTCCTaGTTCTGCAGCAGCTCCATC +
Preference number: 4 (lower is better)
Translates to: SAKPWYMVSQRFGPSEATARPSS*FCSSSI
Trigger: GATGGAGCTGCTGCAGAACCAGGACGAGGGCCGCGC...AGTGGCCTCTGAGGGCCCAAACCGCTGTGATACCATATACCAAGGCTTTGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp CCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTTACCACAAATGTGAAGTCCTCGTaGGCAGTGTGGGTAGAGAGT +
Preference number: 4 (lower is better)
Translates to: PKKAHYVPWARLTLLVTTNVKSS*AVWVES
Trigger: ACTCTCTACCCACACTGCCCACGAGGACTTCACATT...TGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACAGGTCAGCTCCTCAGGTaGTCTGGGCAAGGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: GVTILGSRFRHGRTQEGTGQLLR*SGQGRV
Trigger: GACCCTTCCTTGCCCAGACCACCTGAGGAGCTGACC...TGTGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp CTGTGGCCCGTAGTGTCTCCTGGTTGGTCTCTGGGCCAGCAATCCGCTCCCGAACTTGGAAGGCAGCCGTaGAGTAGGAATTTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LWPVVSPGWSLGQQSAPELGRQP*SRNFAA
Trigger: GGCAGCAAAATTCCTACTCCACGGCTGCCTTCCAAG...TTCGGGAGCGGATTGCTGGCCCAGAGACCAACCAGGAGACACTACGGGCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp GGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTTGTAGCAGTTCTTCTTaGTTGTGCCATAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: GRTQEGTLRALGPPDPAGCSSSS*LCHSSA
Trigger: GGCAGAGCTATGGCACAACCAAGAAGAACTGCTACA...ACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGTGTAGCAGTTCTTCTTaGTTGTGCCATAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: GMVGPKKAHYVPWARLTLCSSSS*LCHSSA
Trigger: GGCAGAGCTATGGCACAACCAAGAAGAACTGCTACA...CAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACAACAGCCACATGCAGCTaGTGTTGCACCTCGGCCCGA +
Preference number: 4 (lower is better)
Translates to: GVTILGSRFRHGRTQEGTTATCS*CCTSAR
Trigger: TCGGGCCGAGGTGCAACACCAGCTGCATGTGGCTGT...TGTGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTCAGCAAGTGATAAGGTaGCCTTTCTGTCAGTGTGCT +
Preference number: 4 (lower is better)
Translates to: GRTQEGTLRALGPPDPAGQQVIR*PFCQCA
Trigger: AGCACACTGACAGAAAGGCCACCTTATCACTTGCTG...ACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp GCGCCACAGAGGATGTGCAAATTATCTGGGTGTGGGGCGCGGCGAGCTTCTTGCCTCCAGAGAGGCAAATaGCCTGCTTTTCCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: APQRMCKLSGCGARRASCLQRGK*PAFPAG
Trigger: ACCTGCAGGAAAAGCAGGTCATTTGCCTCTCTGGAG...GCAAGAAGCTCGCCGCGCCCCACACCCAGATAATTTGCACATCCTCTGTGGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR TCA 90 bp GGCGCCAGTGGCAGTGGCAGCAGTTGCACATCATCCCTGGCTGTAAGCCTAGTGGAGACTCTCCAAATGTaGAGTCCTCGTGGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: GASGSGSSCTSSLAVSLVETLQM*SPRGQC
Trigger: ACACTGCCCACGAGGACTTCACATTTGGAGAGTCTC...CACTAGGCTTACAGCCAGGGATGATGTGCAACTGCTGCCACTGCCACTGGCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR TCA 90 bp GGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACAGCCGTAGGCCAGACTTaGCTGTCAGGGGTTGCAACT +
Preference number: 4 (lower is better)
Translates to: GVTILGSRFRHGRTQEGTAVGQT*LSGVAT
Trigger: AGTTGCAACCCCTGACAGTCAAGTCTGGCCTACGGC...TGTGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp GGCAGCAGTTGCACATCATCCCTGGCTGTAAGCCTAGTGCAGGAGCGAGAGGCTTCAGCACTTGTGTCCTaGCTGTCACGTTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GSSCTSSLAVSLVQEREASALVS*LSRCCS
Trigger: GCTGCAGCAACGTGACAGTCAGGACACAAGTGCTGA...AGCCTCTCGCTCCTGCACTAGGCTTACAGCCAGGGATGATGTGCAACTGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR TCA 90 bp AGGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGAGGAACCGTTTTCTTaGTTTCATCCCTTACGCTGC +
Preference number: 4 (lower is better)
Translates to: RHGRTQEGTLRALGPPDPEEPFS*FHPLRC
Trigger: GCAGCGTAAGGGATGAAATCAAGAAAACGGTTCCTC...AGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp AGGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTATGACCTGCTTTTCCTaGAGGTTAATGGGTGGCATG +
Preference number: 4 (lower is better)
Translates to: RHGRTQEGTLRALGPPDPMTCFS*RLMGGM
Trigger: CATGCCACCCATTAACCTGCAGGAAAAGCAGGTCAT...AGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp TCCCCCAGGCGGATGAGACATTCAGCAAAGCCTTGGTATATGGTATCACAGCGGTCAGCCCGATCCTCATaGAGCAGGGCCACTGTCGGG +
Preference number: 4 (lower is better)
Translates to: SPRRMRHSAKPWYMVSQRSARSS*SRATVG
Trigger: CCCGACAGTGGCCCTGCTGCATGAGGATCGGGCTGA...CCGCTGTGATACCATATACCAAGGCTTTGCTGAATGTCTCATCCGCCTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp CCCTGGGCCCGCCTGACCCTGCTGGTTACCACAATCAGTAGAGCACTGCCCGTGCTTCACTTAGGCACGTaGTATGGCCTTTCACCACAA +
Preference number: 4 (lower is better)
Translates to: PWARLTLLVTTISRALPVLHLGT*YGLSPQ
Trigger: TTGTGGTGAAAGGCCATAGCACGTGCCTAAGTGAAG...CACGGGCAGTGCTCTACTGATTGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp GCGCTAGAGCGGCGGCGAGCAACACAGGGGCTGGAGCTGGAGCCAGTGCAGGAGTGTAGTGCCTTAGTGTaGACACAAAAGAGCTTGATA +
Preference number: 4 (lower is better)
Translates to: ALERRRATQGLELEPVQECSALV*TQKSLI
Trigger: TATCAAGCTCTTTTGTGTGCACACTAAGGCACTACA...CTCCTGCACTGGCTCCAGCTCCAGCCCCTGTGTTGCTCGCCGCCGCTCTAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp CAGAGGCCACTGCGAGTGGTAGTAGCAGCAACAGCGTCAGGGCACAGGGTAGCCGGCTGGAAGCGGATCTaGACATCTTGTAGTGCCTTA +
Preference number: 4 (lower is better)
Translates to: QRPLRVVVAATASGHRVAGWKRI*TSCSAL
Trigger: TAAGGCACTACAAGATGTGCAGATCCGCTTCCAGCC...GGCTACCCTGTGCCCTGACGCTGTTGCTGCTACTACCACTCGCAGTGGCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp GGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACACAGCTGTTAGAGAGCTaGTGCTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GVTILGSRFRHGRTQEGTQLLES*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAGCTCTCTAACAGCTG...TGTGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp ATGTGCAAATTATCTGGGTGTGGGGCGCGGCGAGCTTCTTGCTGCAGTGACTCCAGGCTGCCATCTAGCTaGAGCTTGGGGCTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: MCKLSGCGARRASCCSDSRLPSS*SLGLKV
Trigger: GACCTTGAGCCCCAAGCTGCAGCTAGATGGCAGCCT...GGAGTCACTGCAGCAAGAAGCTCGCCGCGCCCCACACCCAGATAATTTGCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp AGCACTGCCCGTGAGCCCTGCTGCATACCTCCCTCCACACACCAGAGAGGAAGGCAAATCCAAGGACAGTaGAGAGGCAGCAGTGGATAC +
Preference number: 4 (lower is better)
Translates to: STAREPCCIPPSTHQRGRQIQGQ*RGSSGY
Trigger: GTATCCACTGCTGCCTCTGCACTGTCCTTGGATTTG...CCTTCCTCTCTGGTGTGTGGAGGGAGGTATGCAGCAGGGCTCACGGGCAGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp TACGTGCCCTGGGCCCGCCTGACCCTGCTGGTTACCACAATCAGTAGAGCACTGGGACAGGGCCTCAGATaGGATTTCAGGAATGTCCTG +
Preference number: 4 (lower is better)
Translates to: YVPWARLTLLVTTISRALGQGLR*DFRNVL
Trigger: CAGGACATTCCTGAAATCGCATCTGAGGCCCTGTCC...CAGTGCTCTACTGATTGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGGCACGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp AGCACTGCCCGTGAGCCCTGCTGCATACCTCCCTCCACACACCAGAGAGGAAGGAGCTCTCTTTGCTGCTaGCAAATTAGTGCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: STAREPCCIPPSTHQRGRSSLCC*QISAGQ
Trigger: CTGGCCAGCACTAATTTGGCAGCAGCAAAGAGAGCT...CCTTCCTCTCTGGTGTGTGGAGGGAGGTATGCAGCAGGGCTCACGGGCAGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp GGCGCCAGTGGCAGTGGCAGCAGTTGCACATCATCCCTGGCTGTAAGCCTAGTGGCCAGCTCTCTTTGCTaGTGCCAAATTAGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GASGSGSSCTSSLAVSLVASSLC*CQISAG
Trigger: GCCAGCACTAATTTGGCAGCAGCAAAGAGAGCTGGC...CACTAGGCTTACAGCCAGGGATGATGTGCAACTGCTGCCACTGCCACTGGCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp CCCGTGAGCCCTGCTGCATACCTCCCTCCACACACCAGAGAGGAAGGCCTGAGCTCTGCCAGCTCTCTTTaGTGCTGCCAAATTAGTGCT +
Preference number: 4 (lower is better)
Translates to: PVSPAAYLPPHTREEGLSSASSL*CCQISA
Trigger: AGCACTAATTTGGCAGCAGCAAAGAGAGCTGGCAGA...GCTCAGGCCTTCCTCTCTGGTGTGTGGAGGGAGGTATGCAGCAGGGCTCACGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp TTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCTGTGTCAGCTGCTCCTaGAGCTGCCCACCCCGTTGC +
Preference number: 4 (lower is better)
Translates to: FNSSGVTILGSRFRHGRTCVSCS*SCPPRC
Trigger: GCAACGGGGTGGGCAGCTGCAGGAGCAGCTGACACA...GGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp ACACTCACAGGAGCGCCACAGAGGATGTGCAAATTATCTGGGTGTGGGGCGCGGTTGACTCCTGCAAGCTaGCCACAGCCACATGCAGCT +
Preference number: 4 (lower is better)
Translates to: TLTGAPQRMCKLSGCGARLTPAS*PQPHAA
Trigger: AGCTGCATGTGGCTGTGGGCAGCTTGCAGGAGTCAA...CCGCGCCCCACACCCAGATAATTTGCACATCCTCTGTGGCGCTCCTGTGAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp GGCGCCAGTGGCAGTGGCAGCAGTTGCACATCATCCCTGGCTGTAAGCCTAGTGGCTAAGATTGACTCCTaGAAGCTGCCCACAGCCACA +
Preference number: 4 (lower is better)
Translates to: GASGSGSSCTSSLAVSLVAKIDS*KLPTAT
Trigger: TGTGGCTGTGGGCAGCTTGCAGGAGTCAATCTTAGC...CACTAGGCTTACAGCCAGGGATGATGTGCAACTGCTGCCACTGCCACTGGCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp TACGTGCCCTGGGCCCGCCTGACCCTGCTGGTTACCACAATCAGTAGAGCACTGGCTGAACGCATAGCCTaGATGATGCTGGAAGTGACG +
Preference number: 4 (lower is better)
Translates to: YVPWARLTLLVTTISRALAERIA*MMLEVT
Trigger: CGTCACTTCCAGCATCATGCAGGCTATGCGTTCAGC...CAGTGCTCTACTGATTGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGGCACGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp TATCTGGGTGTGGGGCGCGGCGAGCTTCTTGCTGCAGTGACTCCCACACTGCAGCCCTGCTGCAGTAACTaGAAGATATGGGCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: YLGVGRGELLAAVTPTLQPCCSN*KIWACW
Trigger: CCAACAAGCCCATATCTTGCAGTTACTGCAGCAGGG...CTGCAGTGTGGGAGTCACTGCAGCAAGAAGCTCGCCGCGCCCCACACCCAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp CTCGCCTCCTCGACCCATGCCATCCCCCAGGCGGATGAGACATTCAGCAAAGCCTTGAGGTGGCCCTGCTaGAGTAACTGCAAGATATGG +
Preference number: 4 (lower is better)
Translates to: LASSTHAIPQADETFSKALRWPC*SNCKIW
Trigger: CCATATCTTGCAGTTACTGCAGCAGGGCCACCTCAA...GGCTTTGCTGAATGTCTCATCCGCCTGGGGGATGGCATGGGTCGAGGAGGCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp TACGTGCCCTGGGCCCGCCTGACCCTGCTGGTTACCACAATCAGTAGAGCACTGATCAGCAGCAGTCAGTaGCTGCTGGAAGGCCTGATT +
Preference number: 4 (lower is better)
Translates to: YVPWARLTLLVTTISRALISSSQ*LLEGLI
Trigger: AATCAGGCCTTCCAGCAGGCACTGACTGCTGCTGAT...CAGTGCTCTACTGATTGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGGCACGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp AGTGCAGGAGCTGTGGCCCGTAGTGTCTCCTGGTTGGTCTCTGGGCCAGCAATCATCAGCAGCAGTCAGTaGCTGCTGGAAGGCCTGATT +
Preference number: 4 (lower is better)
Translates to: SAGAVARSVSWLVSGPAIISSSQ*LLEGLI
Trigger: AATCAGGCCTTCCAGCAGGCACTGACTGCTGCTGAT...GATTGCTGGCCCAGAGACCAACCAGGAGACACTACGGGCCACAGCTCCTGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp CCTCCCACCTGCCGGTACCTGCAGACAGTCTGTAGCTCGCCTCCTCGACCCATGAGGTCAGATGCTAGCTaGTGGATTAGGGAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: PPTCRYLQTVCSSPPRPMRSDAS*WIRERR
Trigger: TCTCCTTTCCCTAATCCAGCAGCTAGCATCTGACCT...CATGGGTCGAGGAGGCGAGCTACAGACTGTCTGCAGGTACCGGCAGGTGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp AGTGCAGGAGCTGTGGCCCGTAGTGTCTCCTGGTTGGTCTCTGGGCCAGCAATCGCACTGGATGGCCTTTaGCTTTCGGCATTGGAACCT +
Preference number: 4 (lower is better)
Translates to: SAGAVARSVSWLVSGPAIALDGL*LSALEP
Trigger: AGGTTCCAATGCCGAAAGCCAAAGGCCATCCAGTGC...GATTGCTGGCCCAGAGACCAACCAGGAGACACTACGGGCCACAGCTCCTGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp CCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTTACCACAAAATCCCAATGCAGGTaGAGCTGTCATCTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: PKKAHYVPWARLTLLVTTKSQCR*SCHLQR
Trigger: TCTCTGGAGATGACAGCTCCACCTGCATTGGGATTT...TGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GGTACCTGCAGACAGTCTGTAGCTCGCCTCCTCGACCCATGCCATCCCCCAGGCAAATCCCAATGCAGGTaGAGCTGTCATCTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: GTCRQSVARLLDPCHPPGKSQCR*SCHLQR
Trigger: TCTCTGGAGATGACAGCTCCACCTGCATTGGGATTT...GCCTGGGGGATGGCATGGGTCGAGGAGGCGAGCTACAGACTGTCTGCAGGTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp AGCACTGCCCGTGAGCCCTGCTGCATACCTCCCTCCACACACCAGAGAGGAAGGAAGCCTTGCTTGATTTaGCTGACATCCACAGGCCAG +
Preference number: 4 (lower is better)
Translates to: STAREPCCIPPSTHQRGRKPCLI*LTSTGQ
Trigger: CTGGCCTGTGGATGTCAGCCAAATCAAGCAAGGCTT...CCTTCCTCTCTGGTGTGTGGAGGGAGGTATGCAGCAGGGCTCACGGGCAGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCAAAGGCTCCAGCTCCATaGGAACTCTCGGTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: VVSRSWGHASGMVGPKKAKAPAP*ELSVPR
Trigger: TCTGGGGACCGAGAGTTCCCATGGAGCTGGAGCCTT...TGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACACGCAAGGAAGGGTCCATaGCTGAGGAGCTGCTCACAG +
Preference number: 4 (lower is better)
Translates to: VSRSWGHASGMVGPKKAHARKGP*LRSCSQ
Trigger: CTGTGAGCAGCTCCTCAGCCATGGACCCTTCCTTGC...GTGTGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp CTGTGGCCCGTAGTGTCTCCTGGTTGGTCTCTGGGCCAGCAATCCGCTCCCGAAATTTCAGGAATGTCCTaGGACAGGGCAGTGGATGCT +
Preference number: 4 (lower is better)
Translates to: LWPVVSPGWSLGQQSAPEISGMS*DRAVDA
Trigger: AGCATCCACTGCCCTGTCCCAGGACATTCCTGAAAT...TTCGGGAGCGGATTGCTGGCCCAGAGACCAACCAGGAGACACTACGGGCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp GGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGGCAACCTCATCATCATaGTCACTTTGCTCAGCACTT +
Preference number: 4 (lower is better)
Translates to: GMVGPKKAHYVPWARLTLATSSS*SLCSAL
Trigger: AAGTGCTGAGCAAAGTGACCATGATGATGAGGTTGC...CAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTGCAACCTCATCATCATaGTCACTTTGCTCAGCACTT +
Preference number: 4 (lower is better)
Translates to: GRTQEGTLRALGPPDPAGATSSS*SLCSAL
Trigger: AAGTGCTGAGCAAAGTGACCATGATGATGAGGTTGC...ACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp AGCACTGCCCGTGAGCCCTGCTGCATACCTCCCTCCACACACCAGAGAGGAAGGCAGCTGCTCGGGCAATaGCATCTGTTAAGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: STAREPCCIPPSTHQRGRQLLGQ*HLLSSW
Trigger: CCAAGAACTTAACAGATGCCATTGCCCGAGCAGCTG...CCTTCCTCTCTGGTGTGTGGAGGGAGGTATGCAGCAGGGCTCACGGGCAGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGTCATTGATTTGCTaGAACATAGCCTGGCAACTC +
Preference number: 4 (lower is better)
Translates to: GMVGPKKAHYVPWARLTLLSLIC*NIAWQL
Trigger: GAGTTGCCAGGCTATGTTCCAGCAAATCAATGACAG...CAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTCTGTCATTGATTTGCTaGAACATAGCCTGGCAACTC +
Preference number: 4 (lower is better)
Translates to: GRTQEGTLRALGPPDPAGLSLIC*NIAWQL
Trigger: GAGTTGCCAGGCTATGTTCCAGCAAATCAATGACAG...ACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp TACGTGCCCTGGGCCCGCCTGACCCTGCTGGTTACCACAATCAGTAGAGCACTGCCCAAAAACCTGGGCTaGGTCGACAGTTTCACACAC +
Preference number: 4 (lower is better)
Translates to: YVPWARLTLLVTTISRALPKNLG*VDSFTH
Trigger: GTGTGTGAAACTGTCGACCCAGCCCAGGTTTTTGGG...CAGTGCTCTACTGATTGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGGCACGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GGCAGCCTCCCACCTGCCGGTACCTGCAGACAGTCTGTAGCTCGCCTCCTCGACTCAGATGCTAGCTGCTaGATTAGGGAAAGGAGAACA +
Preference number: 4 (lower is better)
Translates to: GSLPPAGTCRQSVARLLDSDASC*IRERRT
Trigger: TGTTCTCCTTTCCCTAATCCAGCAGCTAGCATCTGA...GTCGAGGAGGCGAGCTACAGACTGTCTGCAGGTACCGGCAGGTGGGAGGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR TCA 90 bp TTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCGGGCCGGTCCAGTTTaGGTATGTCCCGCAGATGCT +
Preference number: 4 (lower is better)
Translates to: FNSSGVTILGSRFRHGRTRAGPV*VCPADA
Trigger: AGCATCTGCGGGACATACTCAAACTGGACCGGCCCG...GGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp CAATCCGCTCCCGAACACTCACAGGAGCGCCACAGAGGATGTGCAAATTATCTGCGGGCCGGTCCAGTTTaGGTATGTCCCGCAGATGCT +
Preference number: 4 (lower is better)
Translates to: QSAPEHSQERHRGCANYLRAGPV*VCPADA
Trigger: AGCATCTGCGGGACATACTCAAACTGGACCGGCCCG...CAGATAATTTGCACATCCTCTGTGGCGCTCCTGTGAGTGTTCGGGAGCGGATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR TCA 90 bp AGTGTCTCCTGGTTGGTCTCTGGGCCAGCAATCCGCTCCCGAACACTCACAGGAGGTCCAAACAAACTTTaGGGCTGGGAGGCACACTCA +
Preference number: 4 (lower is better)
Translates to: SVSWLVSGPAIRSRTLTGGPNKL*GWEAHS
Trigger: TGAGTGTGCCTCCCAGCCTCAAAGTTTGTTTGGACC...TCCTGTGAGTGTTCGGGAGCGGATTGCTGGCCCAGAGACCAACCAGGAGACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR TCA 90 bp GTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACACGCAGCAGTGGATACCTaGCCAGGTCCCTTGGAAATC +
Preference number: 4 (lower is better)
Translates to: VSRSWGHASGMVGPKKAHAAVDT*PGPLEI
Trigger: GATTTCCAAGGGACCTGGTCAGGTATCCACTGCTGC...GTGTGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp GTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCATCAGCACTTGTGTCCTaGCTGTCACGTTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VVSRSWGHASGMVGPKKASALVS*LSRCCS
Trigger: GCTGCAGCAACGTGACAGTCAGGACACAAGTGCTGA...TGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp GTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCATCTCTTGAGCTTAGGTaGCGTCCGAGGGGATCCCTT +
Preference number: 4 (lower is better)
Translates to: VVSRSWGHASGMVGPKKASLELR*RPRGSL
Trigger: AAGGGATCCCCTCGGACGTCACCTAAGCTCAAGAGA...TGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp GGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACATCTCTTGAGCTTAGGTaGCGTCCGAGGGGATCCCTT +
Preference number: 4 (lower is better)
Translates to: GVTILGSRFRHGRTQEGTSLELR*RPRGSL
Trigger: AAGGGATCCCCTCGGACGTCACCTAAGCTCAAGAGA...TGTGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp GGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTCCACCTGGTGCTCTGTaGGCCGGGATCCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: GKFNSSGVTILGSRFRHGPPGAL*AGIPQL
Trigger: CAGCTGTGGGATCCCGGCTCACAGAGCACCAGGTGG...ACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp GCGCCACAGAGGATGTGCAAATTATCTGGGTGTGGGGCGCGGCGAGCTTCTTGCTCTGTGACAGTACTCTaGAGACCTTCAAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: APQRMCKLSGCGARRASCSVTVL*RPSSWA
Trigger: TGCCCAGCTTGAAGGTCTTCAGAGTACTGTCACAGA...GCAAGAAGCTCGCCGCGCCCCACACCCAGATAATTTGCACATCCTCTGTGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp GGCAGCCTCCCACCTGCCGGTACCTGCAGACAGTCTGTAGCTCGCCTCCTCGACGAAGGAGTTAGACACTaGAATCAGGTTGCCATAGTA +
Preference number: 4 (lower is better)
Translates to: GSLPPAGTCRQSVARLLDEGVRH*NQVAIV
Trigger: TACTATGGCAACCTGATTGCAGTGTCTAACTCCTTC...GTCGAGGAGGCGAGCTACAGACTGTCTGCAGGTACCGGCAGGTGGGAGGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp GTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACACGATGCAGAGATCTGCTaGAGGGAGGCAGTAGGTGTC +
Preference number: 4 (lower is better)
Translates to: VSRSWGHASGMVGPKKAHDAEIC*REAVGV
Trigger: GACACCTACTGCCTCCCTGCAGCAGATCTCTGCATC...GTGTGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp AGCACTGCCCGTGAGCCCTGCTGCATACCTCCCTCCACACACCAGAGAGGAAGGAATGGCTCCACTTCCTaGAAATCCAAGGACAGTGCA +
Preference number: 4 (lower is better)
Translates to: STAREPCCIPPSTHQRGRNGSTS*KSKDSA
Trigger: TGCACTGTCCTTGGATTTGCAGGAAGTGGAGCCATT...CCTTCCTCTCTGGTGTGTGGAGGGAGGTATGCAGCAGGGCTCACGGGCAGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp GGATGTGCAAATTATCTGGGTGTGGGGCGCGGCGAGCTTCTTGCTGCAGTGACTAGGGAAGGGGTACTATaGCTATCCCCATCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GCANYLGVGRGELLAAVTREGVL*LSPSPG
Trigger: CCCTGGAGATGGGGATAGGCATAGTACCCCTTCCCT...AGTCACTGCAGCAAGAAGCTCGCCGCGCCCCACACCCAGATAATTTGCACATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp GCGCCACAGAGGATGTGCAAATTATCTGGGTGTGGGGCGCGGCGAGCTTCTTGCACGAGTAATGTCAGGTaGCGTAGGCCAGACTTGACT +
Preference number: 4 (lower is better)
Translates to: APQRMCKLSGCGARRASCTSNVR*RRPDLT
Trigger: AGTCAAGTCTGGCCTACGGCACCTGACATTACTCGT...GCAAGAAGCTCGCCGCGCCCCACACCCAGATAATTTGCACATCCTCTGTGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp GGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTGGCTCTGCCACCTGGTaGTCTGTGAGCCGGGATCCC +
Preference number: 4 (lower is better)
Translates to: GKFNSSGVTILGSRFRHGGSATW*SVSRDP
Trigger: GGGATCCCGGCTCACAGAGCACCAGGTGGCAGAGCC...ACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp AGTGCAGGAGCTGTGGCCCGTAGTGTCTCCTGGTTGGTCTCTGGGCCAGCAATCAGCTCTCTTTGCTGCTaGCAAATTAGTGCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: SAGAVARSVSWLVSGPAISSLCC*QISAGQ
Trigger: CTGGCCAGCACTAATTTGGCAGCAGCAAAGAGAGCT...GATTGCTGGCCCAGAGACCAACCAGGAGACACTACGGGCCACAGCTCCTGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp AACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCCTGCCCCTCAGCCAGTaGCCGTTCCAGCCGCCGTTG +
Preference number: 4 (lower is better)
Translates to: NMENSTQVVSRSWGHASGLPLSQ*PFQPPL
Trigger: CAACGGCGGCTGGAACGGGCACTGGCTGAGGGGCAG...GCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp GCGCCACAGAGGATGTGCAAATTATCTGGGTGTGGGGCGCGGCGAGCTTCTTGCCTGCTGCTCCTTAAGTaGCACACTCACTTCACCCTT +
Preference number: 4 (lower is better)
Translates to: APQRMCKLSGCGARRASCLLLLK*HTHFTL
Trigger: AAGGGTGAAGTGAGTGTGGCACTTAAGGAGCAGCAG...GCAAGAAGCTCGCCGCGCCCCACACCCAGATAATTTGCACATCCTCTGTGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp CCCGAACACTCACAGGAGCGCCACAGAGGATGTGCAAATTATCTGGGTGTGGGGCAGGCAGGCGAGCTGTaGAGAGTTGAGGTGTGCAAA +
Preference number: 4 (lower is better)
Translates to: PEHSQERHRGCANYLGVGQAGEL*RVEVCK
Trigger: TTTGCACACCTCAACTCTCCACAGCTCGCCTGCCTG...CCCCACACCCAGATAATTTGCACATCCTCTGTGGCGCTCCTGTGAGTGTTCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp CGTAGTGTCTCCTGGTTGGTCTCTGGGCCAGCAATCCGCTCCCGAACACTCACACAGCGACTGACAACCTaGATGCCAAAGCTCAGCACA +
Preference number: 4 (lower is better)
Translates to: RSVSWLVSGPAIRSRTLTQRLTT*MPKLST
Trigger: TGTGCTGAGCTTTGGCATCCAGGTTGTCAGTCGCTG...TGTGAGTGTTCGGGAGCGGATTGCTGGCCCAGAGACCAACCAGGAGACACTACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp GTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCAATCAGGGTTCAGCTGTaGCTGGAAGCGGATCTGCAC +
Preference number: 4 (lower is better)
Translates to: VVSRSWGHASGMVGPKKAIRVQL*LEADLH
Trigger: GTGCAGATCCGCTTCCAGCCACAGCTGAACCCTGAT...TGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCAAGTGTGGGTAGAGAGTaGGGCCACCACATCAGGGTT +
Preference number: 4 (lower is better)
Translates to: VVSRSWGHASGMVGPKKASVGRE*GHHIRV
Trigger: AACCCTGATGTGGTGGCCCCACTCTCTACCCACACT...TGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACACAGTGTGGGTAGAGAGTaGGGCCACCACATCAGGGTT +
Preference number: 4 (lower is better)
Translates to: VSRSWGHASGMVGPKKAHSVGRE*GHHIRV
Trigger: AACCCTGATGTGGTGGCCCCACTCTCTACCCACACT...GTGTGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp CCCGAACACTCACAGGAGCGCCACAGAGGATGTGCAAATTATCTGGGTGTGGGGAGTGTGGGTAGAGAGTaGGGCCACCACATCAGGGTT +
Preference number: 4 (lower is better)
Translates to: PEHSQERHRGCANYLGVGSVGRE*GHHIRV
Trigger: AACCCTGATGTGGTGGCCCCACTCTCTACCCACACT...CCCCACACCCAGATAATTTGCACATCCTCTGTGGCGCTCCTGTGAGTGTTCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp ATCCCCCAGGCGGATGAGACATTCAGCAAAGCCTTGGTATATGGTATCACAGCGTCCTCGTGGGCAGTGTaGGTAGAGAGTGGGGCCACC +
Preference number: 4 (lower is better)
Translates to: IPQADETFSKALVYGITASSWAV*VESGAT
Trigger: GGTGGCCCCACTCTCTACCCACACTGCCCACGAGGA...CGCTGTGATACCATATACCAAGGCTTTGCTGAATGTCTCATCCGCCTGGGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp TTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCGGGGTTGCAACTTCCTaGGTCAGGGCTGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: FNSSGVTILGSRFRHGRTGVATS*VRAASS
Trigger: GCTGGAAGCAGCCCTGACCCAGGAAGTTGCAACCCC...GGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp CCCTCAGAGGCCACTGCGAGTGGTAGTAGCAGCAACAGCGTCAGGGCACAGGGTTGTAGCAGTTCTTCTTaGTTGTGCCATAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: PSEATASGSSSNSVRAQGCSSSS*LCHSSA
Trigger: GGCAGAGCTATGGCACAACCAAGAAGAACTGCTACA...ACCCTGTGCCCTGACGCTGTTGCTGCTACTACCACTCGCAGTGGCCTCTGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp GGCAGCAGTTGCACATCATCCCTGGCTGTAAGCCTAGTGCAGGAGCGAGAGGCTGCTGAAGACAATGCCTaGGATAGCTGCTGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: GSSCTSSLAVSLVQEREAAEDNA*DSCCVS
Trigger: GCTGACACAGCAGCTATCCCAGGCATTGTCTTCAGC...AGCCTCTCGCTCCTGCACTAGGCTTACAGCCAGGGATGATGTGCAACTGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp GTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACAGGCTCCAGACTTCTaGAGACACATGGAGGAACCG +
Preference number: 4 (lower is better)
Translates to: VVSRSWGHASGMVGPKKAQAPDF*RHMEEP
Trigger: CGGTTCCTCCATGTGTCTCCAGAAGTCTGGAGCCTG...TGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GCGCCACAGAGGATGTGCAAATTATCTGGGTGTGGGGCGCGGCGAGCTTCTTGCCAGCTGCTCGGGCAATaGCATCTGTTAAGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: APQRMCKLSGCGARRASCQLLGQ*HLLSSW
Trigger: CCAAGAACTTAACAGATGCCATTGCCCGAGCAGCTG...GCAAGAAGCTCGCCGCGCCCCACACCCAGATAATTTGCACATCCTCTGTGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp GGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACAGGCTGCCCAAAAACCTaGGCTGGGTCGACAGTTTCA +
Preference number: 4 (lower is better)
Translates to: GVTILGSRFRHGRTQEGTGCPKT*AGSTVS
Trigger: TGAAACTGTCGACCCAGCCCAGGTTTTTGGGCAGCC...TGTGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCAGTGATGGGATCGCTGTaGTCCAGGTGCATCACAGCT +
Preference number: 4 (lower is better)
Translates to: VVSRSWGHASGMVGPKKAVMGSL*SRCITA
Trigger: AGCTGTGATGCACCTGGACCACAGCGATCCCATCAC...TGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp GTGTCTCCTGGTTGGTCTCTGGGCCAGCAATCCGCTCCCGAACACTCACAGGAGGAGGAACCGTTTTCTTaGTTTCATCCCTTACGCTGC +
Preference number: 4 (lower is better)
Translates to: VSPGWSLGQQSAPEHSQEEEPFS*FHPLRC
Trigger: GCAGCGTAAGGGATGAAATCAAGAAAACGGTTCCTC...CTCCTGTGAGTGTTCGGGAGCGGATTGCTGGCCCAGAGACCAACCAGGAGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR TCA 90 bp CGTAGTGTCTCCTGGTTGGTCTCTGGGCCAGCAATCCGCTCCCGAACACTCACACATACAGCACCAGATTaGGATCAGCAGCAGTCAGTG +
Preference number: 4 (lower is better)
Translates to: RSVSWLVSGPAIRSRTLTHTAPD*DQQQSV
Trigger: CACTGACTGCTGCTGATCTCAATCTGGTGCTGTATG...TGTGAGTGTTCGGGAGCGGATTGCTGGCCCAGAGACCAACCAGGAGACACTACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp TTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCATGTCCCGCAGATGCTaGGTGGCGTCCTCAATGTCG +
Preference number: 4 (lower is better)
Translates to: FNSSGVTILGSRFRHGRTMSRRC*VASSMS
Trigger: CGACATTGAGGACGCCACGCAGCATCTGCGGGACAT...GGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp GGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTACACTGCAATCAGGTTaGCATAGTAGTATTTCTGCT +
Preference number: 4 (lower is better)
Translates to: GRTQEGTLRALGPPDPAGTLQSG*HSSISA
Trigger: AGCAGAAATACTACTATGGCAACCTGATTGCAGTGT...ACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp CCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTTACCACAGAAGGAGTTAGACACTaGAATCAGGTTGCCATAGTA +
Preference number: 4 (lower is better)
Translates to: PKKAHYVPWARLTLLVTTEGVRH*NQVAIV
Trigger: TACTATGGCAACCTGATTGCAGTGTCTAACTCCTTC...TGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp AGTGCAGGAGCTGTGGCCCGTAGTGTCTCCTGGTTGGTCTCTGGGCCAGCAATCAGCCCTAATGGCGTATaGCAAGAAGGAGTTAGACAC +
Preference number: 4 (lower is better)
Translates to: SAGAVARSVSWLVSGPAISPNGV*QEGVRH
Trigger: GTGTCTAACTCCTTCTTGGCATACGCCATTAGGGCT...GATTGCTGGCCCAGAGACCAACCAGGAGACACTACGGGCCACAGCTCCTGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp ATCCCCCAGGCGGATGAGACATTCAGCAAAGCCTTGGTATATGGTATCACAGCGTTCCTGGGTCAGGGCTaGTTCCAGCAGGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: IPQADETFSKALVYGITAFLGQG*FQQGRG
Trigger: ACCCCTTCCCTGCTGGAAGCAGCCCTGACCCAGGAA...CGCTGTGATACCATATACCAAGGCTTTGCTGAATGTCTCATCCGCCTGGGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp TTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCTTTCATCCCTTACGCTaGGCTCTAGCCGCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: FNSSGVTILGSRFRHGRTFHPLR*ALAAQP
Trigger: TGGCTGGGCGGCTAGAGCGCAGCGTAAGGGATGAAA...GGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp CCTCCCACCTGCCGGTACCTGCAGACAGTCTGTAGCTCGCCTCCTCGACCCATGAAGCTGTCATTGATTTaGTGGAACATAGCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: PPTCRYLQTVCSSPPRPMKLSLI*WNIAWQ
Trigger: TTGCCAGGCTATGTTCCAGCAAATCAATGACAGCTT...CATGGGTCGAGGAGGCGAGCTACAGACTGTCTGCAGGTACCGGCAGGTGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp GTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACACTCGCTGTGGTCCAGGTaGATCACAGCTTCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: VSRSWGHASGMVGPKKAHSLWSR*ITASSK
Trigger: CTTGGAAGAAGCTGTGATGCACCTGGACCACAGCGA...GTGTGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCAGCACTGGATGGCCTTTaGCTTTCGGCATTGGAACCT +
Preference number: 4 (lower is better)
Translates to: VVSRSWGHASGMVGPKKAALDGL*LSALEP
Trigger: AGGTTCCAATGCCGAAAGCCAAAGGCCATCCAGTGC...TGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp TACGTGCCCTGGGCCCGCCTGACCCTGCTGGTTACCACAATCAGTAGAGCACTGTACTTGGCGACAGGCTaGATTTTCACCTTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: YVPWARLTLLVTTISRALYLATG*IFTLLL
Trigger: GAGCAACAAGGTGAAAATCCAGCCTGTCGCCAAGTA...CAGTGCTCTACTGATTGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGGCACGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp AGTGTCTCCTGGTTGGTCTCTGGGCCAGCAATCCGCTCCCGAACACTCACAGGAAAGCCTTGCTTGATTTaGCTGACATCCACAGGCCAG +
Preference number: 4 (lower is better)
Translates to: SVSWLVSGPAIRSRTLTGKPCLI*LTSTGQ
Trigger: CTGGCCTGTGGATGTCAGCCAAATCAAGCAAGGCTT...TCCTGTGAGTGTTCGGGAGCGGATTGCTGGCCCAGAGACCAACCAGGAGACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp AGGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGGATCCTGTTTCTTATaGTTATCACAGAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: RHGRTQEGTLRALGPPDPGSCFL*LSQNRR
Trigger: CCTCCTGTTCTGTGATAACCATAAGAAACAGGATCC...AGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTGCCTGGCAGTCAAGGTaGGCAGAGGGGACAGGTGTG +
Preference number: 4 (lower is better)
Translates to: GKFNSSGVTILGSRFRHGAWQSR*AEGTGV
Trigger: CACACCTGTCCCCTCTGCCCACCTTGACTGCCAGGC...ACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACACAAGATATGGGCTTGTTaGGCCTGGCAGTCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: VSRSWGHASGMVGPKKAHKIWAC*AWQSRW
Trigger: CCACCTTGACTGCCAGGCCCAACAAGCCCATATCTT...GTGTGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACAATGACAGAGCCCATGTaGTCTCGAGTGATGGGATCG +
Preference number: 4 (lower is better)
Translates to: GVTILGSRFRHGRTQEGTMTEPM*SRVMGS
Trigger: CGATCCCATCACTCGAGACCACATGGGCTCTGTCAT...TGTGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GGATGTGCAAATTATCTGGGTGTGGGGCGCGGCGAGCTTCTTGCTGCAGTGACTATGACAGAGCCCATGTaGTCTCGAGTGATGGGATCG +
Preference number: 4 (lower is better)
Translates to: GCANYLGVGRGELLAAVTMTEPM*SRVMGS
Trigger: CGATCCCATCACTCGAGACCACATGGGCTCTGTCAT...AGTCACTGCAGCAAGAAGCTCGCCGCGCCCCACACCCAGATAATTTGCACATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
3UTR CAA 72 bp GCCATCCCCCAGGCGGATGAGACATTCAGCAAAGCCTaGGTATATGGTATCACAGCGGTTTGGGCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: AIPQADETFSKA*VYGITAVWALR
Trigger: TCTGAGGGCCCAAACCGCTGTGATACCATATACCAAGGCTTTGCTGAATGTCTCATCCGCCTGGGGGATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR TCA 90 bp AACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCGGTCGGCGCCGGTTATaGGGAACCTCCAGAACGGGA +
Preference number: 4 (lower is better)
Translates to: NMENSTQVVSRSWGHASGGRRRL*GTSRTG
Trigger: TCCCGTTCTGGAGGTTCCTCATAACCGGCGCCGACC...GCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp TTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCGCAGCAGTGGATACCTaGCCAGGTCCCTTGGAAATC +
Preference number: 4 (lower is better)
Translates to: FNSSGVTILGSRFRHGRTAAVDT*PGPLEI
Trigger: GATTTCCAAGGGACCTGGTCAGGTATCCACTGCTGC...GGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp GGCAGCAGTTGCACATCATCCCTGGCTGTAAGCCTAGTGCAGGAGCGAGAGGCTTGGCTAAAATCCCAATaGAGGTGGAGCTGTCATCTC +
Preference number: 4 (lower is better)
Translates to: GSSCTSSLAVSLVQEREAWLKSQ*RWSCHL
Trigger: GAGATGACAGCTCCACCTGCATTGGGATTTTAGCCA...AGCCTCTCGCTCCTGCACTAGGCTTACAGCCAGGGATGATGTGCAACTGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp AAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCGGCAGGACCTCAGTGTaGCGTAGCCGGCAGCGACTG +
Preference number: 4 (lower is better)
Translates to: KEHGKFNSSGVTILGSRFGRTSV*RSRQRL
Trigger: CAGTCGCTGCCGGCTACGGCACACTGAGGTCCTGCC...GAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp GGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACAGGCTGGAAGCGGATCTaGACATCTTGTAGTGCCTTA +
Preference number: 4 (lower is better)
Translates to: GVTILGSRFRHGRTQEGTGWKRI*TSCSAL
Trigger: TAAGGCACTACAAGATGTGCAGATCCGCTTCCAGCC...TGTGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp CAATCCGCTCCCGAACACTCACAGGAGCGCCACAGAGGATGTGCAAATTATCTGGATGCAGAGATCTGCTaGAGGGAGGCAGTAGGTGTC +
Preference number: 4 (lower is better)
Translates to: QSAPEHSQERHRGCANYLDAEIC*REAVGV
Trigger: GACACCTACTGCCTCCCTGCAGCAGATCTCTGCATC...CAGATAATTTGCACATCCTCTGTGGCGCTCCTGTGAGTGTTCGGGAGCGGATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp GGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTGCAGGCTGCTGCTGCTaGTGTTTAGCGTCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GKFNSSGVTILGSRFRHGAGCCC*CLASGC
Trigger: GCAGCCTGACGCTAAACAGCAGCAGCAGCAGCCTGC...ACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp GGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACACAAATCCAAGGACAGTaGAGAGGCAGCAGTGGATAC +
Preference number: 4 (lower is better)
Translates to: GVTILGSRFRHGRTQEGTQIQGQ*RGSSGY
Trigger: GTATCCACTGCTGCCTCTGCACTGTCCTTGGATTTG...TGTGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp GTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACACAGCTCTCTTTGCTGCTaGCAAATTAGTGCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: VSRSWGHASGMVGPKKAHSSLCC*QISAGQ
Trigger: CTGGCCAGCACTAATTTGGCAGCAGCAAAGAGAGCT...GTGTGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp TTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCAATGCCTGGGATAGCTaGTGTGTCAGCTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: FNSSGVTILGSRFRHGRTNAWDS*CVSCSC
Trigger: GCAGGAGCAGCTGACACAGCAGCTATCCCAGGCATT...GGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp GGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTCTGCCCACAGCCACATaGAGCTGGTGTTGCACCTCG +
Preference number: 4 (lower is better)
Translates to: GKFNSSGVTILGSRFRHGLPTAT*SWCCTS
Trigger: CGAGGTGCAACACCAGCTGCATGTGGCTGTGGGCAG...ACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp GTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCATTGAGGTGGCCCTGCTaGAGTAACTGCAAGATATGG +
Preference number: 4 (lower is better)
Translates to: VVSRSWGHASGMVGPKKALRWPC*SNCKIW
Trigger: CCATATCTTGCAGTTACTGCAGCAGGGCCACCTCAA...TGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp AGTGTCTCCTGGTTGGTCTCTGGGCCAGCAATCCGCTCCCGAACACTCACAGGATACTTGGCGACAGGCTaGATTTTCACCTTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: SVSWLVSGPAIRSRTLTGYLATG*IFTLLL
Trigger: GAGCAACAAGGTGAAAATCCAGCCTGTCGCCAAGTA...TCCTGTGAGTGTTCGGGAGCGGATTGCTGGCCCAGAGACCAACCAGGAGACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp TTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCACAGGCCAGGTGTTGTaGCTGGAGCGAAGCATATCC +
Preference number: 4 (lower is better)
Translates to: FNSSGVTILGSRFRHGRTTGQVL*LERSIS
Trigger: GGATATGCTTCGCTCCAGCCACAACACCTGGCCTGT...GGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp TTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCGGGTTCAGCTGTGGCTaGAAGCGGATCTGCACATCT +
Preference number: 4 (lower is better)
Translates to: FNSSGVTILGSRFRHGRTGFSCG*KRICTS
Trigger: AGATGTGCAGATCCGCTTCCAGCCACAGCTGAACCC...GGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACACCTGACCAGGTCCCTTaGAAATCAACTTGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: GVTILGSRFRHGRTQEGTPDQVP*KSTCQL
Trigger: CAGCTGACAAGTTGATTTCCAAGGGACCTGGTCAGG...TGTGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GGATGTGCAAATTATCTGGGTGTGGGGCGCGGCGAGCTTCTTGCTGCAGTGACTCCTGACCAGGTCCCTTaGAAATCAACTTGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: GCANYLGVGRGELLAAVTPDQVP*KSTCQL
Trigger: CAGCTGACAAGTTGATTTCCAAGGGACCTGGTCAGG...AGTCACTGCAGCAAGAAGCTCGCCGCGCCCCACACCCAGATAATTTGCACATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp AGTGCAGGAGCGAGAGGCTTGGAGAGCTGCCTCCCTCCACACACCAGAGAGGAAGCAACCTCATCATCATaGTCACTTTGCTCAGCACTT +
Preference number: 4 (lower is better)
Translates to: SAGARGLESCLPPHTREEATSSS*SLCSAL
Trigger: AAGTGCTGAGCAAAGTGACCATGATGATGAGGTTGC...TTCCTCTCTGGTGTGTGGAGGGAGGCAGCTCTCCAAGCCTCTCGCTCCTGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp GGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTTGGGCTTGTTGGGCCTaGCAGTCAAGGTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GKFNSSGVTILGSRFRHGWACWA*QSRWAE
Trigger: CTCTGCCCACCTTGACTGCCAGGCCCAACAAGCCCA...ACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp GGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGCGGGCCGGTCCAGTTTaGGTATGTCCCGCAGATGCT +
Preference number: 4 (lower is better)
Translates to: GTWKIQLKWCHDLGVTLQRAGPV*VCPADA
Trigger: AGCATCTGCGGGACATACTCAAACTGGACCGGCCCG...CTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp GGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACAAGATCTGCCAGAACTTaGCAAAGCCATCATGGCTTG +
Preference number: 4 (lower is better)
Translates to: GVTILGSRFRHGRTQEGTRSART*QSHHGL
Trigger: CAAGCCATGATGGCTTTGTCAAGTTCTGGCAGATCT...TGTGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp AAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCGGTCGGCGCCGGTTATaGGGAACCTCCAGAACGGGA +
Preference number: 4 (lower is better)
Translates to: KEHGKFNSSGVTILGSRFGRRRL*GTSRTG
Trigger: TCCCGTTCTGGAGGTTCCTCATAACCGGCGCCGACC...GAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp CAATCCGCTCCCGAACACTCACAGGAGCGCCACAGAGGATGTGCAAATTATCTGGCACACTCACTGAGCTaGAGATATCTGGGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: QSAPEHSQERHRGCANYLAHSLS*RYLGRS
Trigger: GCTTCTCCCCAGATATCTTCAGCTCAGTGAGTGTGC...CAGATAATTTGCACATCCTCTGTGGCGCTCCTGTGAGTGTTCGGGAGCGGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR TCA 90 bp GGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGTAGCCGGCAGCGACTaGCAACCTGGATGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: GTWKIQLKWCHDLGVTLQVAGSD*QPGCQS
Trigger: GCTTTGGCATCCAGGTTGTCAGTCGCTGCCGGCTAC...CTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp AAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCGCTGCCAAAACCTCCTaGGGCAGAGGCAAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: KEHGKFNSSGVTILGSRFAAKTS*GRGKAG
Trigger: GCCAGCCTTGCCTCTGCCTCAGGAGGTTTTGGCAGC...GAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp GCGGATGAGACATTCAGCAAAGCCTTGGTATATGGTATCACAGCGGTTTGGGCCTCTCTTGAGCTTAGGTaGCGTCCGAGGGGATCCCTT +
Preference number: 4 (lower is better)
Translates to: ADETFSKALVYGITAVWASLELR*RPRGSL
Trigger: AAGGGATCCCCTCGGACGTCACCTAAGCTCAAGAGA...GGCCCAAACCGCTGTGATACCATATACCAAGGCTTTGCTGAATGTCTCATCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR TCA 90 bp GTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACACGAGGAACCGTTTTCTTaGTTTCATCCCTTACGCTGC +
Preference number: 4 (lower is better)
Translates to: VSRSWGHASGMVGPKKAHEEPFS*FHPLRC
Trigger: GCAGCGTAAGGGATGAAATCAAGAAAACGGTTCCTC...GTGTGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp CACAGCGGTTTGGGCCCTCAGAGGCCACTGCGAGTGGTAGTAGCAGCAACAGCGACACTGCAATCAGGTTaGCATAGTAGTATTTCTGCT +
Preference number: 4 (lower is better)
Translates to: HSGLGPQRPLRVVVAATATLQSG*HSSISA
Trigger: AGCAGAAATACTACTATGGCAACCTGATTGCAGTGT...CGCTGTTGCTGCTACTACCACTCGCAGTGGCCTCTGAGGGCCCAAACCGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp TACGTGCCCTGGGCCCGCCTGACCCTGCTGGTTACCACAATCAGTAGAGCACTGGAAGGAGTTAGACACTaGAATCAGGTTGCCATAGTA +
Preference number: 4 (lower is better)
Translates to: YVPWARLTLLVTTISRALEGVRH*NQVAIV
Trigger: TACTATGGCAACCTGATTGCAGTGTCTAACTCCTTC...CAGTGCTCTACTGATTGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGGCACGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp TTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCGAGAAGCGAATGGTTTaGAGGCAGGTCCAGGACACT +
Preference number: 4 (lower is better)
Translates to: FNSSGVTILGSRFRHGRTEKRMV*RQVQDT
Trigger: AGTGTCCTGGACCTGCCTGCAAACCATTCGCTTCTC...GGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp GTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCAAATGGCTCCACTTCCTaGAAATCCAAGGACAGTGCA +
Preference number: 4 (lower is better)
Translates to: VVSRSWGHASGMVGPKKANGSTS*KSKDSA
Trigger: TGCACTGTCCTTGGATTTGCAGGAAGTGGAGCCATT...TGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp GGATGTGCAAATTATCTGGGTGTGGGGCGCGGCGAGCTTCTTGCTGCAGTGACTAATGGCTCCACTTCCTaGAAATCCAAGGACAGTGCA +
Preference number: 4 (lower is better)
Translates to: GCANYLGVGRGELLAAVTNGSTS*KSKDSA
Trigger: TGCACTGTCCTTGGATTTGCAGGAAGTGGAGCCATT...AGTCACTGCAGCAAGAAGCTCGCCGCGCCCCACACCCAGATAATTTGCACATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp AAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCCCAAGCTCAGGGCCTTaGCTGGGCCGAGGAGAGAGT +
Preference number: 4 (lower is better)
Translates to: KEHGKFNSSGVTILGSRFPSSGP*LGRGES
Trigger: ACTCTCTCCTCGGCCCAGGCAAGGCCCTGAGCTTGG...GAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp GGATGTGCAAATTATCTGGGTGTGGGGCGCGGCGAGCTTCTTGCTGCAGTGACTTCTGCCAGCTCTCTTTaGTGCTGCCAAATTAGTGCT +
Preference number: 4 (lower is better)
Translates to: GCANYLGVGRGELLAAVTSASSL*CCQISA
Trigger: AGCACTAATTTGGCAGCAGCAAAGAGAGCTGGCAGA...AGTCACTGCAGCAAGAAGCTCGCCGCGCCCCACACCCAGATAATTTGCACATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp AAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGCTGCTGTGTCAGCTaGTCCTGCAGCTGCCCACCC +
Preference number: 4 (lower is better)
Translates to: KEHGKFNSSGVTILGSRFSCCVS*SCSCPP
Trigger: GGGTGGGCAGCTGCAGGAGCAGCTGACACAGCAGCT...GAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCAATTGTAGGCACTGGATaGCCTTTGGCTTTCGGCATT +
Preference number: 4 (lower is better)
Translates to: VVSRSWGHASGMVGPKKAIVGTG*PLAFGI
Trigger: AATGCCGAAAGCCAAAGGCCATCCAGTGCCTACAAT...TGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp TGGGCCAGCAATCCGCTCCCGAACACTCACAGGAGCGCCACAGAGGATGTGCAACAATTTCCACTTCCTTaGCTAAAATCCCAATGCAGG +
Preference number: 4 (lower is better)
Translates to: WASNPLPNTHRSATEDVQQFPLP*LKSQCR
Trigger: CCTGCATTGGGATTTTAGCCAAGGAAGTGGAAATTG...TTGCACATCCTCTGTGGCGCTCCTGTGAGTGTTCGGGAGCGGATTGCTGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp GGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCTCCTCAGGTGGTCTaGGCAAGGAAGGGTCCATGG +
Preference number: 4 (lower is better)
Translates to: GTWKIQLKWCHDLGVTLQAPQVV*ARKGPW
Trigger: CCATGGACCCTTCCTTGCCCAGACCACCTGAGGAGC...CTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp AAAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTGGGGGCTCTGCCACCTaGTGCTCTGTGAGCCGGGAT +
Preference number: 4 (lower is better)
Translates to: KGTWKIQLKWCHDLGVTLGGSAT*CSVSRD
Trigger: ATCCCGGCTCACAGAGCACCAGGTGGCAGAGCCCCC...AAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp TTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCGCTGAAGACAATGCCTaGGATAGCTGCTGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: FNSSGVTILGSRFRHGRTAEDNA*DSCCVS
Trigger: GCTGACACAGCAGCTATCCCAGGCATTGTCTTCAGC...GGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GCGGATGAGACATTCAGCAAAGCCTTGGTATATGGTATCACAGCGGTTTGGGCCCAGGCTCCAGACTTCTaGAGACACATGGAGGAACCG +
Preference number: 4 (lower is better)
Translates to: ADETFSKALVYGITAVWAQAPDF*RHMEEP
Trigger: CGGTTCCTCCATGTGTCTCCAGAAGTCTGGAGCCTG...GGCCCAAACCGCTGTGATACCATATACCAAGGCTTTGCTGAATGTCTCATCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp ACACTCACAGGAGCGCCACAGAGGATGTGCAAATTATCTGGGTGTGGGGCGCGGTGCTGGAACATAGCCTaGCAACTCTTCTCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: TLTGAPQRMCKLSGCGARCWNIA*QLFSKA
Trigger: AGCTTTTGAGAAGAGTTGCCAGGCTATGTTCCAGCA...CCGCGCCCCACACCCAGATAATTTGCACATCCTCTGTGGCGCTCCTGTGAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp AACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCACAGCCACATGCAGCTaGTGTTGCACCTCGGCCCGA +
Preference number: 4 (lower is better)
Translates to: NMENSTQVVSRSWGHASGTATCS*CCTSAR
Trigger: TCGGGCCGAGGTGCAACACCAGCTGCATGTGGCTGT...GCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp CAATCCGCTCCCGAACACTCACAGGAGCGCCACAGAGGATGTGCAAATTATCTGAAGATATGGGCTTGTTaGGCCTGGCAGTCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: QSAPEHSQERHRGCANYLKIWAC*AWQSRW
Trigger: CCACCTTGACTGCCAGGCCCAACAAGCCCATATCTT...CAGATAATTTGCACATCCTCTGTGGCGCTCCTGTGAGTGTTCGGGAGCGGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
3UTR CAA 72 bp ATTCAGCAAAGCCTTGGTATATGGTATCACAGCGGTTaGGGCCCTCAGAGGCCACTGCGAGTGGTAGTAGCA +
Preference number: 4 (lower is better)
Translates to: IQQSLGIWYHSG*GPQRPLRVVVA
Trigger: TGCTACTACCACTCGCAGTGGCCTCTGAGGGCCCAAACCGCTGTGATACCATATACCAAGGCTTTGCTGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR TCA 90 bp GGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTGGGAGGCACACTCACTaGGCTGAAGATATCTGGGGA +
Preference number: 4 (lower is better)
Translates to: GKFNSSGVTILGSRFRHGGRHTH*AEDIWG
Trigger: TCCCCAGATATCTTCAGCTCAGTGAGTGTGCCTCCC...ACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp GGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTTCTCACTGCTCAGACTaGGGAAGTCTGCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: GKFNSSGVTILGSRFRHGSHCSD*GSLQEQ
Trigger: CTGCTCCTGCAGACTTCCTCAGTCTGAGCAGTGAGA...ACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp AAAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTGCTGCCAAAACCTCCTaGGGCAGAGGCAAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: KGTWKIQLKWCHDLGVTLAAKTS*GRGKAG
Trigger: GCCAGCCTTGCCTCTGCCTCAGGAGGTTTTGGCAGC...AAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp TTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCTCTGTGACAGTACTCTaGAGACCTTCAAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: FNSSGVTILGSRFRHGRTSVTVL*RPSSWA
Trigger: TGCCCAGCTTGAAGGTCTTCAGAGTACTGTCACAGA...GGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp AAAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTGGCGCACCTGAGCCATaGCAGAGCCCATGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: KGTWKIQLKWCHDLGVTLGAPEP*QSPCGL
Trigger: GAGACCACATGGGCTCTGTCATGGCTCAGGTGCGCC...AAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp TACGTGCCCTGGGCCCGCCTGACCCTGCTGGTTACCACAATCAGTAGAGCACTGTGTAGTGCCTTAGTGTaGACACAAAAGAGCTTGATA +
Preference number: 4 (lower is better)
Translates to: YVPWARLTLLVTTISRALCSALV*TQKSLI
Trigger: TATCAAGCTCTTTTGTGTGCACACTAAGGCACTACA...CAGTGCTCTACTGATTGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGGCACGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp GGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGCAGCTGTTAGAGAGCTaGTGCTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GTWKIQLKWCHDLGVTLQQLLES*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAGCTCTCTAACAGCTG...CTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp TCAGCAAAGCCTTGGTATATGGTATCACAGCGGTTTGGGCCCTCAGAGGCCACTCAAATCCAAGGACAGTaGAGAGGCAGCAGTGGATAC +
Preference number: 4 (lower is better)
Translates to: SAKPWYMVSQRFGPSEATQIQGQ*RGSSGY
Trigger: GTATCCACTGCTGCCTCTGCACTGTCCTTGGATTTG...AGTGGCCTCTGAGGGCCCAAACCGCTGTGATACCATATACCAAGGCTTTGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR GCA 90 bp AAAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTAGTGGACAGGGCGGCTaGCCAAAAACCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: KGTWKIQLKWCHDLGVTLSGQGG*PKTWAG
Trigger: CCCAGCCCAGGTTTTTGGGCAGCCGCCCTGTCCACT...AAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp AACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCCTGGGGAGAAGCGAATaGTTTGCAGGCAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: NMENSTQVVSRSWGHASGLGRSE*FAGRSR
Trigger: CCTGGACCTGCCTGCAAACCATTCGCTTCTCCCCAG...GCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp TCAGCAAAGCCTTGGTATATGGTATCACAGCGGTTTGGGCCCTCAGAGGCCACTCAGGTGTCATCAACTTaGGCTTGGTCTCACTGCTCA +
Preference number: 4 (lower is better)
Translates to: SAKPWYMVSQRFGPSEATQVSST*AWSHCS
Trigger: TGAGCAGTGAGACCAAGCCCAAGTTGATGACACCTG...AGTGGCCTCTGAGGGCCCAAACCGCTGTGATACCATATACCAAGGCTTTGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp AAAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCGACTTGGGGAGGCCTaGGGTAGCCCTAATGGCTCC +
Preference number: 4 (lower is better)
Translates to: KGTWKIQLKWCHDLGVTLRLGEA*GSPNGS
Trigger: GGAGCCATTAGGGCTACCCCAGGCCTCCCCAAGTCG...AAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACAACTCTTCTCAAAAGCTaGCAGTACCACACTCTGGAA +
Preference number: 4 (lower is better)
Translates to: GVTILGSRFRHGRTQEGTTLLKS*QYHTLE
Trigger: TTCCAGAGTGTGGTACTGCCAGCTTTTGAGAAGAGT...TGTGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCAACTCTTCTCAAAAGCTaGCAGTACCACACTCTGGAA +
Preference number: 4 (lower is better)
Translates to: VVSRSWGHASGMVGPKKATLLKS*QYHTLE
Trigger: TTCCAGAGTGTGGTACTGCCAGCTTTTGAGAAGAGT...TGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACACTGCTGGAACATAGCCTaGCAACTCTTCTCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: VSRSWGHASGMVGPKKAHCWNIA*QLFSKA
Trigger: AGCTTTTGAGAAGAGTTGCCAGGCTATGTTCCAGCA...GTGTGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp TCAGCAAAGCCTTGGTATATGGTATCACAGCGGTTTGGGCCCTCAGAGGCCACTAGTAACTGCAAGATATaGGCTTGTTGGGCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: SAKPWYMVSQRFGPSEATSNCKI*ACWAWQ
Trigger: CTGCCAGGCCCAACAAGCCCATATCTTGCAGTTACT...AGTGGCCTCTGAGGGCCCAAACCGCTGTGATACCATATACCAAGGCTTTGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp GGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTGTGATGGGATCGCTGTaGTCCAGGTGCATCACAGCT +
Preference number: 4 (lower is better)
Translates to: GKFNSSGVTILGSRFRHGVMGSL*SRCITA
Trigger: AGCTGTGATGCACCTGGACCACAGCGATCCCATCAC...ACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp TTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCAGATCTGCCAGAACTTaGCAAAGCCATCATGGCTTG +
Preference number: 4 (lower is better)
Translates to: FNSSGVTILGSRFRHGRTRSART*QSHHGL
Trigger: CAAGCCATGATGGCTTTGTCAAGTTCTGGCAGATCT...GGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp TTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCTCTGCCAGCTCTCTTTaGTGCTGCCAAATTAGTGCT +
Preference number: 4 (lower is better)
Translates to: FNSSGVTILGSRFRHGRTSASSL*CCQISA
Trigger: AGCACTAATTTGGCAGCAGCAAAGAGAGCTGGCAGA...GGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp GGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGAATGCCTGGGATAGCTaGTGTGTCAGCTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GTWKIQLKWCHDLGVTLQNAWDS*CVSCSC
Trigger: GCAGGAGCAGCTGACACAGCAGCTATCCCAGGCATT...CTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp GGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACAAAGCTGTCATTGATTTaGTGGAACATAGCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: GVTILGSRFRHGRTQEGTKLSLI*WNIAWQ
Trigger: TTGCCAGGCTATGTTCCAGCAAATCAATGACAGCTT...TGTGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp AAAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTACAGTGGCCGCCATCTaGTCGGTGGCACTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: KGTWKIQLKWCHDLGVTLTVAAI*SVALCS
Trigger: ACTGCAGAGTGCCACCGAGCAGATGGCGGCCACTGT...AAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp GGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTGCTAAGATTGACTCCTaGAAGCTGCCCACAGCCACA +
Preference number: 4 (lower is better)
Translates to: GKFNSSGVTILGSRFRHGAKIDS*KLPTAT
Trigger: TGTGGCTGTGGGCAGCTTGCAGGAGTCAATCTTAGC...ACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTCTGCAGGTTAATGGGTaGCATGGTCCGTATACCAGG +
Preference number: 4 (lower is better)
Translates to: GKFNSSGVTILGSRFRHGLQVNG*HGPYTR
Trigger: CCTGGTATACGGACCATGCCACCCATTAACCTGCAG...ACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACAATTTCCACTTCCTTaGCTAAAATCCCAATGCAGG +
Preference number: 4 (lower is better)
Translates to: VVSRSWGHASGMVGPKKAQFPLP*LKSQCR
Trigger: CCTGCATTGGGATTTTAGCCAAGGAAGTGGAAATTG...TGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACACAATTTCCACTTCCTTaGCTAAAATCCCAATGCAGG +
Preference number: 4 (lower is better)
Translates to: GVTILGSRFRHGRTQEGTQFPLP*LKSQCR
Trigger: CCTGCATTGGGATTTTAGCCAAGGAAGTGGAAATTG...TGTGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACACGGATCCTGTTTCTTATaGTTATCACAGAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: VSRSWGHASGMVGPKKAHGSCFL*LSQNRR
Trigger: CCTCCTGTTCTGTGATAACCATAAGAAACAGGATCC...GTGTGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGATCAGGGTTCAGCTGTaGCTGGAAGCGGATCTGCAC +
Preference number: 4 (lower is better)
Translates to: GTWKIQLKWCHDLGVTLQIRVQL*LEADLH
Trigger: GTGCAGATCCGCTTCCAGCCACAGCTGAACCCTGAT...CTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp AAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCGTGCAGAGGCAGCAGTaGATACCTGACCAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: KEHGKFNSSGVTILGSRFVQRQQ*IPDQVP
Trigger: AGGGACCTGGTCAGGTATCCACTGCTGCCTCTGCAC...GAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGCAGGCTCCAGACTTCTaGAGACACATGGAGGAACCG +
Preference number: 4 (lower is better)
Translates to: GTWKIQLKWCHDLGVTLQQAPDF*RHMEEP
Trigger: CGGTTCCTCCATGTGTCTCCAGAAGTCTGGAGCCTG...CTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp ATATGGTATCACAGCGGTTTGGGCCCTCAGAGGCCACTGCGAGTGGTAGTAGCACTGTCATTGATTTGCTaGAACATAGCCTGGCAACTC +
Preference number: 4 (lower is better)
Translates to: IWYHSGLGPQRPLRVVVALSLIC*NIAWQL
Trigger: GAGTTGCCAGGCTATGTTCCAGCAAATCAATGACAG...TGCTACTACCACTCGCAGTGGCCTCTGAGGGCCCAAACCGCTGTGATACCATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp GGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGGCTGCCCAAAAACCTaGGCTGGGTCGACAGTTTCA +
Preference number: 4 (lower is better)
Translates to: GTWKIQLKWCHDLGVTLQGCPKT*AGSTVS
Trigger: TGAAACTGTCGACCCAGCCCAGGTTTTTGGGCAGCC...CTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp GTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCAACACTGCAATCAGGTTaGCATAGTAGTATTTCTGCT +
Preference number: 4 (lower is better)
Translates to: VVSRSWGHASGMVGPKKATLQSG*HSSISA
Trigger: AGCAGAAATACTACTATGGCAACCTGATTGCAGTGT...TGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp GGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACATGTAGTGCCTTAGTGTaGACACAAAAGAGCTTGATA +
Preference number: 4 (lower is better)
Translates to: GVTILGSRFRHGRTQEGTCSALV*TQKSLI
Trigger: TATCAAGCTCTTTTGTGTGCACACTAAGGCACTACA...TGTGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp AAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCGATGCAGAGATCTGCTaGAGGGAGGCAGTAGGTGTC +
Preference number: 4 (lower is better)
Translates to: KEHGKFNSSGVTILGSRFDAEIC*REAVGV
Trigger: GACACCTACTGCCTCCCTGCAGCAGATCTCTGCATC...GAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp AACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCTGTTTAGCGTCAGGCTaGCATCTAGCTGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: NMENSTQVVSRSWGHASGCLASG*HLAAAW
Trigger: CCAAGCTGCAGCTAGATGGCAGCCTGACGCTAAACA...GCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp AAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGGAAGGGGTACTATaGCTATCCCCATCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: KEHGKFNSSGVTILGSRFREGVL*LSPSPG
Trigger: CCCTGGAGATGGGGATAGGCATAGTACCCCTTCCCT...GAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp AAAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTTTTCATCCCTTACGCTaGGCTCTAGCCGCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: KGTWKIQLKWCHDLGVTLFHPLR*ALAAQP
Trigger: TGGCTGGGCGGCTAGAGCGCAGCGTAAGGGATGAAA...AAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGCTGCAGGTTAATGGGTaGCATGGTCCGTATACCAGG +
Preference number: 4 (lower is better)
Translates to: GTWKIQLKWCHDLGVTLQLQVNG*HGPYTR
Trigger: CCTGGTATACGGACCATGCCACCCATTAACCTGCAG...CTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp AACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCCAGCGACTGACAACCTaGATGCCAAAGCTCAGCACA +
Preference number: 4 (lower is better)
Translates to: NMENSTQVVSRSWGHASGQRLTT*MPKLST
Trigger: TGTGCTGAGCTTTGGCATCCAGGTTGTCAGTCGCTG...GCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTATTTCAGGAATGTCCTaGGACAGGGCAGTGGATGCT +
Preference number: 4 (lower is better)
Translates to: GKFNSSGVTILGSRFRHGISGMS*DRAVDA
Trigger: AGCATCCACTGCCCTGTCCCAGGACATTCCTGAAAT...ACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp AACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCCTTGGAAGGCAGCCGTaGAGTAGGAATTTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: NMENSTQVVSRSWGHASGLGRQP*SRNFAA
Trigger: GGCAGCAAAATTCCTACTCCACGGCTGCCTTCCAAG...GCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp TCAGCAAAGCCTTGGTATATGGTATCACAGCGGTTTGGGCCCTCAGAGGCCACTACTCTTCTCAAAAGCTaGCAGTACCACACTCTGGAA +
Preference number: 4 (lower is better)
Translates to: SAKPWYMVSQRFGPSEATTLLKS*QYHTLE
Trigger: TTCCAGAGTGTGGTACTGCCAGCTTTTGAGAAGAGT...AGTGGCCTCTGAGGGCCCAAACCGCTGTGATACCATATACCAAGGCTTTGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CCA 90 bp TTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCTGCTGGAACATAGCCTaGCAACTCTTCTCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: FNSSGVTILGSRFRHGRTCWNIA*QLFSKA
Trigger: AGCTTTTGAGAAGAGTTGCCAGGCTATGTTCCAGCA...GGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp AAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCGCACACTCACTGAGCTaGAGATATCTGGGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: KEHGKFNSSGVTILGSRFAHSLS*RYLGRS
Trigger: GCTTCTCCCCAGATATCTTCAGCTCAGTGAGTGTGC...GAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp AAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCGGTCCAAACAAACTTTaGGGCTGGGAGGCACACTCA +
Preference number: 4 (lower is better)
Translates to: KEHGKFNSSGVTILGSRFGPNKL*GWEAHS
Trigger: TGAGTGTGCCTCCCAGCCTCAAAGTTTGTTTGGACC...GAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp AAAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTTCAGCACTTGTGTCCTaGCTGTCACGTTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: KGTWKIQLKWCHDLGVTLSALVS*LSRCCS
Trigger: GCTGCAGCAACGTGACAGTCAGGACACAAGTGCTGA...AAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp AAAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTAGGTGTGCCAGCAGCTaGACGCATAGCCTGCATGAT +
Preference number: 4 (lower is better)
Translates to: KGTWKIQLKWCHDLGVTLRCASS*THSLHD
Trigger: ATCATGCAGGCTATGCGTTCAGCTGCTGGCACACCT...AAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp GGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGCATACAGCACCAGATTaGGATCAGCAGCAGTCAGTG +
Preference number: 4 (lower is better)
Translates to: GTWKIQLKWCHDLGVTLQHTAPD*DQQQSV
Trigger: CACTGACTGCTGCTGATCTCAATCTGGTGCTGTATG...CTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR TCA 90 bp AAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCGGCAGCTTTGCTAAGTaGGTTGTGTGGATCAGCCTG +
Preference number: 4 (lower is better)
Translates to: KEHGKFNSSGVTILGSRFGSFAK*VVWISL
Trigger: CAGGCTGATCCACACAACTCACTTAGCAAAGCTGCC...GAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp GGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTTGGCTAAAATCCCAATaGAGGTGGAGCTGTCATCTC +
Preference number: 4 (lower is better)
Translates to: GKFNSSGVTILGSRFRHGWLKSQ*RWSCHL
Trigger: GAGATGACAGCTCCACCTGCATTGGGATTTTAGCCA...ACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp AACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCGGCTGGAAGCGGATCTaGACATCTTGTAGTGCCTTA +
Preference number: 4 (lower is better)
Translates to: NMENSTQVVSRSWGHASGGWKRI*TSCSAL
Trigger: TAAGGCACTACAAGATGTGCAGATCCGCTTCCAGCC...GCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp AAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCGGACAGGGCCTCAGATaGGATTTCAGGAATGTCCTG +
Preference number: 4 (lower is better)
Translates to: KEHGKFNSSGVTILGSRFGQGLR*DFRNVL
Trigger: CAGGACATTCCTGAAATCGCATCTGAGGCCCTGTCC...GAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp TTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCAAGCTGTCATTGATTTaGTGGAACATAGCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: FNSSGVTILGSRFRHGRTKLSLI*WNIAWQ
Trigger: TTGCCAGGCTATGTTCCAGCAAATCAATGACAGCTT...GGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp AAAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTACAGGCCAGGTGTTGTaGCTGGAGCGAAGCATATCC +
Preference number: 4 (lower is better)
Translates to: KGTWKIQLKWCHDLGVTLTGQVL*LERSIS
Trigger: GGATATGCTTCGCTCCAGCCACAACACCTGGCCTGT...AAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp AAAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTAAGCTCAGCACAGGGTaGGTGAGCAGGAACTCAGAG +
Preference number: 4 (lower is better)
Translates to: KGTWKIQLKWCHDLGVTLKLSTG*VSRNSE
Trigger: CTCTGAGTTCCTGCTCACCCACCCTGTGCTGAGCTT...AAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp AACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCCAGGTGTCATCAACTTaGGCTTGGTCTCACTGCTCA +
Preference number: 4 (lower is better)
Translates to: NMENSTQVVSRSWGHASGQVSST*AWSHCS
Trigger: TGAGCAGTGAGACCAAGCCCAAGTTGATGACACCTG...GCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGCAGCTGCTCGGGCAATaGCATCTGTTAAGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: GTWKIQLKWCHDLGVTLQQLLGQ*HLLSSW
Trigger: CCAAGAACTTAACAGATGCCATTGCCCGAGCAGCTG...CTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp AACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCAGTAACTGCAAGATATaGGCTTGTTGGGCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: NMENSTQVVSRSWGHASGSNCKI*ACWAWQ
Trigger: CTGCCAGGCCCAACAAGCCCATATCTTGCAGTTACT...GCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGAGTAACTGCAAGATATaGGCTTGTTGGGCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GTWKIQLKWCHDLGVTLQSNCKI*ACWAWQ
Trigger: CTGCCAGGCCCAACAAGCCCATATCTTGCAGTTACT...CTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp GGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGCTTCACTTAGGCACGTaGTATGGCCTTTCACCACAA +
Preference number: 4 (lower is better)
Translates to: GTWKIQLKWCHDLGVTLQLHLGT*YGLSPQ
Trigger: TTGTGGTGAAAGGCCATAGCACGTGCCTAAGTGAAG...CTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp AAAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTGCTGAACGCATAGCCTaGATGATGCTGGAAGTGACG +
Preference number: 4 (lower is better)
Translates to: KGTWKIQLKWCHDLGVTLAERIA*MMLEVT
Trigger: CGTCACTTCCAGCATCATGCAGGCTATGCGTTCAGC...AAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp AAAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGCGACTGACAACCTaGATGCCAAAGCTCAGCACA +
Preference number: 4 (lower is better)
Translates to: KGTWKIQLKWCHDLGVTLQRLTT*MPKLST
Trigger: TGTGCTGAGCTTTGGCATCCAGGTTGTCAGTCGCTG...AAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp AAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCATTTCAGGAATGTCCTaGGACAGGGCAGTGGATGCT +
Preference number: 4 (lower is better)
Translates to: KEHGKFNSSGVTILGSRFISGMS*DRAVDA
Trigger: AGCATCCACTGCCCTGTCCCAGGACATTCCTGAAAT...GAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp AAAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCCCAAAAACCTGGGCTaGGTCGACAGTTTCACACAC +
Preference number: 4 (lower is better)
Translates to: KGTWKIQLKWCHDLGVTLPKNLG*VDSFTH
Trigger: GTGTGTGAAACTGTCGACCCAGCCCAGGTTTTTGGG...AAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp AAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCATGACCTGCTTTTCCTaGAGGTTAATGGGTGGCATG +
Preference number: 4 (lower is better)
Translates to: KEHGKFNSSGVTILGSRFMTCFS*RLMGGM
Trigger: CATGCCACCCATTAACCTGCAGGAAAAGCAGGTCAT...GAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp AAAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCTGCTGCTCCTTAAGTaGCACACTCACTTCACCCTT +
Preference number: 4 (lower is better)
Translates to: KGTWKIQLKWCHDLGVTLLLLLK*HTHFTL
Trigger: AAGGGTGAAGTGAGTGTGGCACTTAAGGAGCAGCAG...AAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp AAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCATTGTAGGCACTGGATaGCCTTTGGCTTTCGGCATT +
Preference number: 4 (lower is better)
Translates to: KEHGKFNSSGVTILGSRFIVGTG*PLAFGI
Trigger: AATGCCGAAAGCCAAAGGCCATCCAGTGCCTACAAT...GAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp GGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGTTCATGCAGACACCTTaGCTCATCCTGACCTTCAAT +
Preference number: 4 (lower is better)
Translates to: GTWKIQLKWCHDLGVTLQFMQTP*LILTFN
Trigger: ATTGAAGGTCAGGATGAGCCAAGGTGTCTGCATGAA...CTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp AACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCTCAGATGCTAGCTGCTaGATTAGGGAAAGGAGAACA +
Preference number: 4 (lower is better)
Translates to: NMENSTQVVSRSWGHASGSDASC*IRERRT
Trigger: TGTTCTCCTTTCCCTAATCCAGCAGCTAGCATCTGA...GCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp AAAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTAGCCCTAATGGCGTATaGCAAGAAGGAGTTAGACAC +
Preference number: 4 (lower is better)
Translates to: KGTWKIQLKWCHDLGVTLSPNGV*QEGVRH
Trigger: GTGTCTAACTCCTTCTTGGCATACGCCATTAGGGCT...AAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR GCA 90 bp AAAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTAGGTCAGATGCTAGCTaGTGGATTAGGGAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: KGTWKIQLKWCHDLGVTLRSDAS*WIRERR
Trigger: TCTCCTTTCCCTAATCCAGCAGCTAGCATCTGACCT...AAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp AAAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTTACTTGGCGACAGGCTaGATTTTCACCTTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: KGTWKIQLKWCHDLGVTLYLATG*IFTLLL
Trigger: GAGCAACAAGGTGAAAATCCAGCCTGTCGCCAAGTA...AAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp AAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCTCAGATGCTAGCTGCTaGATTAGGGAAAGGAGAACA +
Preference number: 4 (lower is better)
Translates to: KEHGKFNSSGVTILGSRFSDASC*IRERRT
Trigger: TGTTCTCCTTTCCCTAATCCAGCAGCTAGCATCTGA...GAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CCA 90 bp AAAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTTTCATGCAGACACCTTaGCTCATCCTGACCTTCAAT +
Preference number: 4 (lower is better)
Translates to: KGTWKIQLKWCHDLGVTLFMQTP*LILTFN
Trigger: ATTGAAGGTCAGGATGAGCCAAGGTGTCTGCATGAA...AAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS GCA 90 bp CAGCTGCTCCTGCAGCTGCCCACCCCGTTGCTGCCCCTCAGCCAGTaGCCGTTCCAGCCGCCGTTGCTCCTGCTCATGCCGCGTCTCCAG +
Preference number: 5 (lower is better)
Translates to: QLLLQLPTPLLPLSQ*PFQPPLLLLMPRLQ
Trigger: CTGGAGACGCGGCATGAGCAGGAGCAACGGCGGCTGGAACGGGCACTGGCTGAGGGGCAGCAACGGGGTGGGCAGCTGCAGGAGCAGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp CCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTTACCACACAGCTGCCCACCCCGTaGCTGCCCCTCAGCCAGTGC +
Preference number: 5 (lower is better)
Translates to: PKKAHYVPWARLTLLVTTQLPTP*LPLSQC
Trigger: GCACTGGCTGAGGGGCAGCAACGGGGTGGGCAGCTG...TGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp AGGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGGAGGCTTCGAGGGCTaGCCTGCAGGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: RHGRTQEGTLRALGPPDPGGFEG*PAGCCC
Trigger: GCAGCAGCAGCCTGCAGGCAAGCCCTCGAAGCCTCC...AGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp AGGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCCAAGCTCAGGGCCTaGCCTGGGCCGAGGAGAGAG +
Preference number: 5 (lower is better)
Translates to: RHGRTQEGTLRALGPPDPAKLRA*PGPRRE
Trigger: CTCTCTCCTCGGCCCAGGCAAGGCCCTGAGCTTGGC...AGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp CCTCCCACCTGCCGGTACCTGCAGACAGTCTGTAGCTCGCCTCCTCGACCCATGGCCAAGCTCAGGGCCTaGCCTGGGCCGAGGAGAGAG +
Preference number: 5 (lower is better)
Translates to: PPTCRYLQTVCSSPPRPMAKLRA*PGPRRE
Trigger: CTCTCTCCTCGGCCCAGGCAAGGCCCTGAGCTTGGC...CATGGGTCGAGGAGGCGAGCTACAGACTGTCTGCAGGTACCGGCAGGTGGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS GCA 90 bp GCAGGCCCGGAAGGAGGCTTCGAGGGCTTGCCTGCAGGCTGCTGCTaGTGCTGTTTAGCGTCAGGCTGCCATCTAGCTGCAGCTTGGGGC +
Preference number: 5 (lower is better)
Translates to: AGPEGGFEGLPAGCC*CCLASGCHLAAAWG
Trigger: GCCCCAAGCTGCAGCTAGATGGCAGCCTGACGCTAAACAGCAGCAGCAGCAGCCTGCAGGCAAGCCCTCGAAGCCTCCTTCCGGGCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
ENSMUST00000145618.2
CDS GCA 90 bp CGCTCTAGCCGCCCAGCCACAGCTGAAGACAATGCCTGGGATAGCTaGTGTGTCAGCTGCTCCTGCAGCTGCCCACCCCGTTGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: RSSRPATAEDNAWDS*CVSCSCSCPPRCCP
Trigger: GGGGCAGCAACGGGGTGGGCAGCTGCAGGAGCAGCTGACACAGCAGCTATCCCAGGCATTGTCTTCAGCTGTGGCTGGGCGGCTAGAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS GCA 90 bp TGCCCCTCAGCCAGTGCCCGTTCCAGCCGCCGTTGCTCCTGCTCATaGCGCGTCTCCAGGGCACGCTCTACATGGTCTGTGACAGTACTC +
Preference number: 5 (lower is better)
Translates to: CPSASARSSRRCSCS*RVSRARSTWSVTVL
Trigger: GAGTACTGTCACAGACCATGTAGAGCGTGCCCTGGAGACGCGGCATGAGCAGGAGCAACGGCGGCTGGAACGGGCACTGGCTGAGGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS GCA 90 bp CCAGCCACAGCTGAAGACAATGCCTGGGATAGCTGCTGTGTCAGCTaGTCCTGCAGCTGCCCACCCCGTTGCTGCCCCTCAGCCAGTGCC +
Preference number: 5 (lower is better)
Translates to: PATAEDNAWDSCCVS*SCSCPPRCCPSASA
Trigger: GGCACTGGCTGAGGGGCAGCAACGGGGTGGGCAGCTGCAGGAGCAGCTGACACAGCAGCTATCCCAGGCATTGTCTTCAGCTGTGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CCA 90 bp ATCTGCTCGGTGGCACTCTGCAGTGTGCTGACCAGGCCCCGAAGCTaGGCCAGCACAGGCTCCCTAGCTTCTTGTTCACGGGCCTTCCGG +
Preference number: 5 (lower is better)
Translates to: ICSVALCSVLTRPRS*ASTGSLASCSRAFR
Trigger: CCGGAAGGCCCGTGAACAAGAAGCTAGGGAGCCTGTGCTGGCCCAGCTTCGGGGCCTGGTCAGCACACTGCAGAGTGCCACCGAGCAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp CCCTGGGCCCGCCTGACCCTGCTGGTTACCACAATCAGTAGAGCACTGCCCGTGGCGGGCCGGTCCAGTTaGAGTATGTCCCGCAGATGC +
Preference number: 5 (lower is better)
Translates to: PWARLTLLVTTISRALPVAGRSS*SMSRRC
Trigger: GCATCTGCGGGACATACTCAAACTGGACCGGCCCGC...CACGGGCAGTGCTCTACTGATTGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp CCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTTACCACAGCGGGCCGGTCCAGTTaGAGTATGTCCCGCAGATGC +
Preference number: 5 (lower is better)
Translates to: PKKAHYVPWARLTLLVTTAGRSS*SMSRRC
Trigger: GCATCTGCGGGACATACTCAAACTGGACCGGCCCGC...TGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS TCA 90 bp GGCCTGGCAGTCAAGGTGGGCAGAGGGGACAGGTGTGCCAGCAGCTaGACGCATAGCCTGCATGATGCTGGAAGTGACGGTGGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: GLAVKVGRGDRCASS*THSLHDAGSDGGLL
Trigger: CAGCAGGCCACCGTCACTTCCAGCATCATGCAGGCTATGCGTTCAGCTGCTGGCACACCTGTCCCCTCTGCCCACCTTGACTGCCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS GCA 90 bp ACAGCTGAAGACAATGCCTGGGATAGCTGCTGTGTCAGCTGCTCCTaGAGCTGCCCACCCCGTTGCTGCCCCTCAGCCAGTGCCCGTTCC +
Preference number: 5 (lower is better)
Translates to: TAEDNAWDSCCVSCS*SCPPRCCPSASARS
Trigger: GGAACGGGCACTGGCTGAGGGGCAGCAACGGGGTGGGCAGCTGCAGGAGCAGCTGACACAGCAGCTATCCCAGGCATTGTCTTCAGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS GCA 90 bp TGTTGCACCTCGGCCCGAACACTGCTAGATACAGTGGCCGCCATCTaGTCGGTGGCACTCTGCAGTGTGCTGACCAGGCCCCGAAGCTGG +
Preference number: 5 (lower is better)
Translates to: CCTSARTLLDTVAAI*SVALCSVLTRPRSW
Trigger: CCAGCTTCGGGGCCTGGTCAGCACACTGCAGAGTGCCACCGAGCAGATGGCGGCCACTGTATCTAGCAGTGTTCGGGCCGAGGTGCAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CCA 90 bp CTTACGCTGCGCTCTAGCCGCCCAGCCACAGCTGAAGACAATGCCTaGGATAGCTGCTGTGTCAGCTGCTCCTGCAGCTGCCCACCCCGT +
Preference number: 5 (lower is better)
Translates to: LTLRSSRPATAEDNA*DSCCVSCSCSCPPR
Trigger: ACGGGGTGGGCAGCTGCAGGAGCAGCTGACACAGCAGCTATCCCAGGCATTGTCTTCAGCTGTGGCTGGGCGGCTAGAGCGCAGCGTAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp CCCTCAGAGGCCACTGCGAGTGGTAGTAGCAGCAACAGCGTCAGGGCACAGGGTGCGGGCCGGTCCAGTTaGAGTATGTCCCGCAGATGC +
Preference number: 5 (lower is better)
Translates to: PSEATASGSSSNSVRAQGAGRSS*SMSRRC
Trigger: GCATCTGCGGGACATACTCAAACTGGACCGGCCCGC...ACCCTGTGCCCTGACGCTGTTGCTGCTACTACCACTCGCAGTGGCCTCTGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp GGCAGCCTCCCACCTGCCGGTACCTGCAGACAGTCTGTAGCTCGCCTCCTCGACCTGCCTGTGAAACCTTaGAGCAGGGTCCGCTCCGAA +
Preference number: 5 (lower is better)
Translates to: GSLPPAGTCRQSVARLLDLPVKP*SRVRSE
Trigger: TTCGGAGCGGACCCTGCTCAAAGGTTTCACAGGCAG...GTCGAGGAGGCGAGCTACAGACTGTCTGCAGGTACCGGCAGGTGGGAGGCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp GGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTTCCACAGGCCAGGTGTaGTGGCTGGAGCGAAGCATA +
Preference number: 5 (lower is better)
Translates to: GRTQEGTLRALGPPDPAGSTGQV*WLERSI
Trigger: TATGCTTCGCTCCAGCCACAACACCTGGCCTGTGGA...ACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp GTGTCTCCTGGTTGGTCTCTGGGCCAGCAATCCGCTCCCGAACACTCACAGGAGGAGAACGGGTTCGACTaGGGGAGGCCTGGGGTAGCC +
Preference number: 5 (lower is better)
Translates to: VSPGWSLGQQSAPEHSQEENGFD*GRPGVA
Trigger: GGCTACCCCAGGCCTCCCCAAGTCGAACCCGTTCTC...CTCCTGTGAGTGTTCGGGAGCGGATTGCTGGCCCAGAGACCAACCAGGAGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp CCCGTGAGCCCTGCTGCATACCTCCCTCCACACACCAGAGAGGAAGGCCTGAGCAGGCTCCCTAGCTTCTaGTTCACGGGCCTTCCGGCT +
Preference number: 5 (lower is better)
Translates to: PVSPAAYLPPHTREEGLSRLPSF*FTGLPA
Trigger: AGCCGGAAGGCCCGTGAACAAGAAGCTAGGGAGCCT...GCTCAGGCCTTCCTCTCTGGTGTGTGGAGGGAGGTATGCAGCAGGGCTCACGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp AGGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTCACATGCAGCTGGTGTaGCACCTCGGCCCGAACACT +
Preference number: 5 (lower is better)
Translates to: RHGRTQEGTLRALGPPDPHMQLV*HLGPNT
Trigger: AGTGTTCGGGCCGAGGTGCAACACCAGCTGCATGTG...AGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS TCA 90 bp GGAGCAGGCAGTTCCACAATGCGCCGCAGGTCAGGCTGGGAACCATaGGCAGCTGAAGCTAGCCCCTCGGAGCCTAGTTCAGGTCGAGAC +
Preference number: 5 (lower is better)
Translates to: GAGSSTMRRRSGWEP*AAEASPSEPSSGRD
Trigger: GTCTCGACCTGAACTAGGCTCCGAGGGGCTAGCTTCAGCTGCTCATGGTTCCCAGCCTGACCTGCGGCGCATTGTGGAACTGCCTGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
ENSMUST00000145618.2
CDS CCA 90 bp GCAGGCAGGACCTCAGTGTGCCGTAGCCGGCAGCGACTGACAACCTaGATGCCAAAGCTCAGCACAGGGTGGGTGAGCAGGAACTCAGAG +
Preference number: 5 (lower is better)
Translates to: AGRTSVCRSRQRLTT*MPKLSTGWVSRNSE
Trigger: CTCTGAGTTCCTGCTCACCCACCCTGTGCTGAGCTTTGGCATCCAGGTTGTCAGTCGCTGCCGGCTACGGCACACTGAGGTCCTGCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
ENSMUST00000145618.2
CDS-3UTR CAA 90 bp CCCTGGGCCCGCCTGACCCTGCTGGTTACCACAATCAGTAGAGCACTGCCCGTGGGCTGGATTTTCACCTaGTTGCTCCCCCGAGCCTTG +
Preference number: 5 (lower is better)
Translates to: PWARLTLLVTTISRALPVGWIFT*LLPRAL
Trigger: CAAGGCTCGGGGGAGCAACAAGGTGAAAATCCAGCC...CACGGGCAGTGCTCTACTGATTGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp GGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCGCCACACAAAAAGATaGCCAGCCTCATCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: GMVGPKKAHYVPWARLTLRHTKR*PASSRQ
Trigger: CTGCCTGGATGAGGCTGGCAATCTTTTTGTGTGGCG...CAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp CCTCCCACCTGCCGGTACCTGCAGACAGTCTGTAGCTCGCCTCCTCGACCCATGTCCACAGGCCAGGTGTaGTGGCTGGAGCGAAGCATA +
Preference number: 5 (lower is better)
Translates to: PPTCRYLQTVCSSPPRPMSTGQV*WLERSI
Trigger: TATGCTTCGCTCCAGCCACAACACCTGGCCTGTGGA...CATGGGTCGAGGAGGCGAGCTACAGACTGTCTGCAGGTACCGGCAGGTGGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp CCCGAACACTCACAGGAGCGCCACAGAGGATGTGCAAATTATCTGGGTGTGGGGGGAGGCTTCGAGGGCTaGCCTGCAGGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: PEHSQERHRGCANYLGVGGGFEG*PAGCCC
Trigger: GCAGCAGCAGCCTGCAGGCAAGCCCTCGAAGCCTCC...CCCCACACCCAGATAATTTGCACATCCTCTGTGGCGCTCCTGTGAGTGTTCGGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp CCCTGGGCCCGCCTGACCCTGCTGGTTACCACAATCAGTAGAGCACTGCCCGTGCCCTTGGAAATCAACTaGTCAGCTGGGCCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: PWARLTLLVTTISRALPVPLEIN*SAGPGS
Trigger: GCTCCCAGGCCCAGCTGACAAGTTGATTTCCAAGGG...CACGGGCAGTGCTCTACTGATTGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp GTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCAGCCAAGCTCAGGGCCTaGCCTGGGCCGAGGAGAGAG +
Preference number: 5 (lower is better)
Translates to: VVSRSWGHASGMVGPKKAAKLRA*PGPRRE
Trigger: CTCTCTCCTCGGCCCAGGCAAGGCCCTGAGCTTGGC...TGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp CCCTCAGAGGCCACTGCGAGTGGTAGTAGCAGCAACAGCGTCAGGGCACAGGGTAGGCTCCCTAGCTTCTaGTTCACGGGCCTTCCGGCT +
Preference number: 5 (lower is better)
Translates to: PSEATASGSSSNSVRAQGRLPSF*FTGLPA
Trigger: AGCCGGAAGGCCCGTGAACAAGAAGCTAGGGAGCCT...ACCCTGTGCCCTGACGCTGTTGCTGCTACTACCACTCGCAGTGGCCTCTGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS TCA 90 bp GCCTTTGGCTTTCGGCATTGGAACCTCCGGCGGGCCGGTCCAGTTTaGGTATGTCCCGCAGATGCTGCGTGGCGTCCTCAATGTCGATGC +
Preference number: 5 (lower is better)
Translates to: AFGFRHWNLRRAGPV*VCPADAAWRPQCRC
Trigger: GCATCGACATTGAGGACGCCACGCAGCATCTGCGGGACATACTCAAACTGGACCGGCCCGCCGGAGGTTCCAATGCCGAAAGCCAAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS GCA 90 bp GTCCCCAGACTGTCATTCTCCTCCTCAGCAGGCAGGACCTCAGTGTaGCGTAGCCGGCAGCGACTGACAACCTGGATGCCAAAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: VPRLSFSSSAGRTSV*RSRQRLTTWMPKLS
Trigger: GCTGAGCTTTGGCATCCAGGTTGTCAGTCGCTGCCGGCTACGGCACACTGAGGTCCTGCCTGCTGAGGAGGAGAATGACAGTCTGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
ENSMUST00000145618.2
CDS GCA 90 bp GCTCCTCAGGTGGTCTGGGCAAGGAAGGGTCCATGGCTGAGGAGCTaGTCACAGCAGACACAGCTGTTAGAGAGCTGCTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: APQVVWARKGPWLRS*SQQTQLLESCCCCC
Trigger: GCAGCAGCAGCAGCAGCTCTCTAACAGCTGTGTCTGCTGTGAGCAGCTCCTCAGCCATGGACCCTTCCTTGCCCAGACCACCTGAGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
ENSMUST00000145618.2
CDS GCA 90 bp TGCAGGCTGCTGCTGCTGCTGTTTAGCGTCAGGCTGCCATCTAGCTaGAGCTTGGGGCTCAAGGTCAGCTCCTCAGGTGGTCTGGGCAAG +
Preference number: 5 (lower is better)
Translates to: CRLLLLLFSVRLPSS*SLGLKVSSSGGLGK
Trigger: CTTGCCCAGACCACCTGAGGAGCTGACCTTGAGCCCCAAGCTGCAGCTAGATGGCAGCCTGACGCTAAACAGCAGCAGCAGCAGCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
ENSMUST00000145618.2
CDS GCA 90 bp AGGTGGGCAGAGGGGACAGGTGTGCCAGCAGCTGAACGCATAGCCTaGATGATGCTGGAAGTGACGGTGGCCTGCTGCTCCTTAAGTGCC +
Preference number: 5 (lower is better)
Translates to: RWAEGTGVPAAERIA*MMLEVTVACCSLSA
Trigger: GGCACTTAAGGAGCAGCAGGCCACCGTCACTTCCAGCATCATGCAGGCTATGCGTTCAGCTGCTGGCACACCTGTCCCCTCTGCCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS GCA 90 bp TGCAGGCTGCTGCTGCTGCTGTTTAGCGTCAGGCTGCCATCTAGCTaGAGCTTGGGGCTCAAGGTCAGCTCCTCAGGTGGTCTACTGGGC +
Preference number: 5 (lower is better)
Translates to: CRLLLLLFSVRLPSS*SLGLKVSSSGGLLG
Trigger: GCCCAGTAGACCACCTGAGGAGCTGACCTTGAGCCCCAAGCTGCAGCTAGATGGCAGCCTGACGCTAAACAGCAGCAGCAGCAGCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132680.8
CDS-3UTR CAA 90 bp GGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGTGCTCCCAGTCATACTaGGCGACAGGCTGGATTTTC +
Preference number: 5 (lower is better)
Translates to: GMVGPKKAHYVPWARLTLCSQSY*ATGWIF
Trigger: GAAAATCCAGCCTGTCGCCAAGTATGACTGGGAGCA...CAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp CCCTGGGCCCGCCTGACCCTGCTGGTTACCACAATCAGTAGAGCACTGCCCGTGACCATTGCTGAGCCATaGTTGGCAGCCCTAATGGCG +
Preference number: 5 (lower is better)
Translates to: PWARLTLLVTTISRALPVTIAEP*LAALMA
Trigger: CGCCATTAGGGCTGCCAACAATGGCTCAGCAATGGT...CACGGGCAGTGCTCTACTGATTGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp CCCTGGGCCCGCCTGACCCTGCTGGTTACCACAATCAGTAGAGCACTGCCCGTGCGCCACACAAAAAGATaGCCAGCCTCATCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: PWARLTLLVTTISRALPVRHTKR*PASSRQ
Trigger: CTGCCTGGATGAGGCTGGCAATCTTTTTGTGTGGCG...CACGGGCAGTGCTCTACTGATTGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp CCCTCAGAGGCCACTGCGAGTGGTAGTAGCAGCAACAGCGTCAGGGCACAGGGTCCCTTGGAAATCAACTaGTCAGCTGGGCCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: PSEATASGSSSNSVRAQGPLEIN*SAGPGS
Trigger: GCTCCCAGGCCCAGCTGACAAGTTGATTTCCAAGGG...ACCCTGTGCCCTGACGCTGTTGCTGCTACTACCACTCGCAGTGGCCTCTGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp GTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCAGAGAACGGGTTCGACTaGGGGAGGCCTGGGGTAGCC +
Preference number: 5 (lower is better)
Translates to: VVSRSWGHASGMVGPKKAENGFD*GRPGVA
Trigger: GGCTACCCCAGGCCTCCCCAAGTCGAACCCGTTCTC...TGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp GGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTTTCGTCTTCCAATCCTaGGAAGGCAGCCGTGGAGTA +
Preference number: 5 (lower is better)
Translates to: GRTQEGTLRALGPPDPAGFVFQS*EGSRGV
Trigger: TACTCCACGGCTGCCTTCCAAGGATTGGAAGACGAA...ACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp GGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGAGCAGTTCTTCTTGGTaGTGCCATAGCTCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: GMVGPKKAHYVPWARLTLSSSSW*CHSSAS
Trigger: GCTGGCAGAGCTATGGCACAACCAAGAAGAACTGCT...CAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp CAATCCGCTCCCGAACACTCACAGGAGCGCCACAGAGGATGTGCAAATTATCTGCAGCTGCCCACCCCGTaGCTGCCCCTCAGCCAGTGC +
Preference number: 5 (lower is better)
Translates to: QSAPEHSQERHRGCANYLQLPTP*LPLSQC
Trigger: GCACTGGCTGAGGGGCAGCAACGGGGTGGGCAGCTG...CAGATAATTTGCACATCCTCTGTGGCGCTCCTGTGAGTGTTCGGGAGCGGATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp AGTGCAGGAGCTGTGGCCCGTAGTGTCTCCTGGTTGGTCTCTGGGCCAGCAATCCACATGCAGCTGGTGTaGCACCTCGGCCCGAACACT +
Preference number: 5 (lower is better)
Translates to: SAGAVARSVSWLVSGPAIHMQLV*HLGPNT
Trigger: AGTGTTCGGGCCGAGGTGCAACACCAGCTGCATGTG...GATTGCTGGCCCAGAGACCAACCAGGAGACACTACGGGCCACAGCTCCTGCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp GGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTGCTTTGCTAAGTGAGTaGTGTGGATCAGCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: GRTQEGTLRALGPPDPAGALLSE*CGSACR
Trigger: CCTGCAGGCTGATCCACACAACTCACTTAGCAAAGC...ACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS GCA 90 bp CCATGGCTGAGGAGCTGCTCACAGCAGACACAGCTGTTAGAGAGCTaGTGCTGCTGCTGCTGCTGCTACTGCTGCTGCTGCTACTGCTGC +
Preference number: 5 (lower is better)
Translates to: PWLRSCSQQTQLLES*CCCCCCYCCCCYCC
Trigger: GCAGCAGTAGCAGCAGCAGCAGTAGCAGCAGCAGCAGCAGCAGCAGCTCTCTAACAGCTGTGTCTGCTGTGAGCAGCTCCTCAGCCATGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
ENSMUST00000145618.2
CDS GCA 90 bp CCTCAGGTGGTCTACTGGGCAAGGAAGGGTCCATGGCTGAGGAGCTaGTCACAGCAGACACAGCTGTTAGAGAGCTGCTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: PQVVYWARKGPWLRS*SQQTQLLESCCCCC
Trigger: GCAGCAGCAGCAGCAGCTCTCTAACAGCTGTGTCTGCTGTGAGCAGCTCCTCAGCCATGGACCCTTCCTTGCCCAGTAGACCACCTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132680.8
CDS CCA 90 bp AGCCGGCAGCGACTGACAACCTGGATGCCAAAGCTCAGCACAGGGTaGGTGAGCAGGAACTCAGAGATAGAACTAAAGCACGCGCGGCCC +
Preference number: 5 (lower is better)
Translates to: SRQRLTTWMPKLSTG*VSRNSEIELKHARP
Trigger: GGGCCGCGCGTGCTTTAGTTCTATCTCTGAGTTCCTGCTCACCCACCCTGTGCTGAGCTTTGGCATCCAGGTTGTCAGTCGCTGCCGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
ENSMUST00000145618.2
CDS-3UTR CAA 90 bp TACGTGCCCTGGGCCCGCCTGACCCTGCTGGTTACCACAATCAGTAGAGCACTGGGCACTGGATGGCCTTaGGCTTTCGGCATTGGAACC +
Preference number: 5 (lower is better)
Translates to: YVPWARLTLLVTTISRALGTGWP*AFGIGT
Trigger: GGTTCCAATGCCGAAAGCCAAAGGCCATCCAGTGCC...CAGTGCTCTACTGATTGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGGCACGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp CTGTGGCCCGTAGTGTCTCCTGGTTGGTCTCTGGGCCAGCAATCCGCTCCCGAAACCATTGCTGAGCCATaGTTGGCAGCCCTAATGGCG +
Preference number: 5 (lower is better)
Translates to: LWPVVSPGWSLGQQSAPETIAEP*LAALMA
Trigger: CGCCATTAGGGCTGCCAACAATGGCTCAGCAATGGT...TTCGGGAGCGGATTGCTGGCCCAGAGACCAACCAGGAGACACTACGGGCCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp GGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTAAAGCCTTGCTTGATTaGGCTGACATCCACAGGCCA +
Preference number: 5 (lower is better)
Translates to: GRTQEGTLRALGPPDPAGKALLD*ADIHRP
Trigger: TGGCCTGTGGATGTCAGCCAAATCAAGCAAGGCTTT...ACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp AGGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGTCATCAACTTGGGCTaGGTCTCACTGCTCAGACTG +
Preference number: 5 (lower is better)
Translates to: RHGRTQEGTLRALGPPDPVINLG*VSLLRL
Trigger: CAGTCTGAGCAGTGAGACCAAGCCCAAGTTGATGAC...AGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp GGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTCGTGGAGTAGGAATTTaGCTGCCAAAACCTCCTGAG +
Preference number: 5 (lower is better)
Translates to: GRTQEGTLRALGPPDPAGRGVGI*LPKPPE
Trigger: CTCAGGAGGTTTTGGCAGCAAAATTCCTACTCCACG...ACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp AGGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTAGCAGTTCTTCTTGGTaGTGCCATAGCTCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: RHGRTQEGTLRALGPPDPSSSSW*CHSSAS
Trigger: GCTGGCAGAGCTATGGCACAACCAAGAAGAACTGCT...AGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp AGCACTGCCCGTGAGCCCTGCTGCATACCTCCCTCCACACACCAGAGAGGAAGGCTGCAAGATATGGGCTaGTTGGGCCTGGCAGTCAAG +
Preference number: 5 (lower is better)
Translates to: STAREPCCIPPSTHQRGRLQDMG*LGLAVK
Trigger: CTTGACTGCCAGGCCCAACAAGCCCATATCTTGCAG...CCTTCCTCTCTGGTGTGTGGAGGGAGGTATGCAGCAGGGCTCACGGGCAGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp CTGTGGCCCGTAGTGTCTCCTGGTTGGTCTCTGGGCCAGCAATCCGCTCCCGAACTGCAAGATATGGGCTaGTTGGGCCTGGCAGTCAAG +
Preference number: 5 (lower is better)
Translates to: LWPVVSPGWSLGQQSAPELQDMG*LGLAVK
Trigger: CTTGACTGCCAGGCCCAACAAGCCCATATCTTGCAG...TTCGGGAGCGGATTGCTGGCCCAGAGACCAACCAGGAGACACTACGGGCCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS GCA 90 bp CTGAGGAGCTGCTCACAGCAGACACAGCTGTTAGAGAGCTGCTGCTaGTGCTGCTGCTGCTACTGCTGCTGCTGCTACTGCTGCTGCTAC +
Preference number: 5 (lower is better)
Translates to: LRSCSQQTQLLESCC*CCCCYCCCCYCCCY
Trigger: GTAGCAGCAGCAGTAGCAGCAGCAGCAGTAGCAGCAGCAGCAGCAGCAGCAGCTCTCTAACAGCTGTGTCTGCTGTGAGCAGCTCCTCAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
ENSMUST00000145618.2
CDS GCA 90 bp AAGATTGACTCCTGCAAGCTGCCCACAGCCACATGCAGCTGGTGTTaGACCTCGGCCCGAACACTGCTAGATACAGTGGCCGCCATCTGC +
Preference number: 5 (lower is better)
Translates to: KIDSCKLPTATCSWC*TSARTLLDTVAAIC
Trigger: GCAGATGGCGGCCACTGTATCTAGCAGTGTTCGGGCCGAGGTGCAACACCAGCTGCATGTGGCTGTGGGCAGCTTGCAGGAGTCAATCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CCA 90 bp AGGCAGGTCCAGGACACTGTGCACCACATCTTCAGCTCTCGATTCTaGTCGGCGCCGGTTATGAGGAACCTCCAGAACGGGACCTCAGGA +
Preference number: 5 (lower is better)
Translates to: RQVQDTVHHIFSSRF*SAPVMRNLQNGTSG
Trigger: TCCTGAGGTCCCGTTCTGGAGGTTCCTCATAACCGGCGCCGACCAGAATCGAGAGCTGAAGATGTGGTGCACAGTGTCCTGGACCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS CCA 90 bp TGTGCTAAGATTGACTCCTGCAAGCTGCCCACAGCCACATGCAGCTaGTGTTGCACCTCGGCCCGAACACTGCTAGATACAGTGGCCGCC +
Preference number: 5 (lower is better)
Translates to: CAKIDSCKLPTATCS*CCTSARTLLDTVAA
Trigger: GGCGGCCACTGTATCTAGCAGTGTTCGGGCCGAGGTGCAACACCAGCTGCATGTGGCTGTGGGCAGCTTGCAGGAGTCAATCTTAGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CCA 90 bp TGCAGTAACTGCAAGATATGGGCTTGTTGGGCCTGGCAGTCAAGGTaGGCAGAGGGGACAGGTGTGCCAGCAGCTGAACGCATAGCCTGC +
Preference number: 5 (lower is better)
Translates to: CSNCKIWACWAWQSR*AEGTGVPAAERIAC
Trigger: GCAGGCTATGCGTTCAGCTGCTGGCACACCTGTCCCCTCTGCCCACCTTGACTGCCAGGCCCAACAAGCCCATATCTTGCAGTTACTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CCA 90 bp CCAAGGTCAGATGCTAGCTGCTGGATTAGGGAAAGGAGAACAGGCTaGGATAGTGGACAGGGCGGCTGCCCAAAAACCTGGGCTGGGTCG +
Preference number: 5 (lower is better)
Translates to: PRSDASCWIRERRTG*DSGQGGCPKTWAGS
Trigger: CGACCCAGCCCAGGTTTTTGGGCAGCCGCCCTGTCCACTATCCCAGCCTGTTCTCCTTTCCCTAATCCAGCAGCTAGCATCTGACCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CCA 90 bp CTCTCCAAATGCTGTGAAGTCCTCGTGGGCAGTGTGGGTAGAGAGTaGGGCCACCACATCAGGGTTCAGCTGTGGCTGGAAGCGGATCTG +
Preference number: 5 (lower is better)
Translates to: LSKCCEVLVGSVGRE*GHHIRVQLWLEADL
Trigger: CAGATCCGCTTCCAGCCACAGCTGAACCCTGATGTGGTGGCCCCACTCTCTACCCACACTGCCCACGAGGACTTCACAGCATTTGGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145618.2
CDS CCA 90 bp TCAGGTCGAGACTCTCCAAATGCTGTGAAGTCCTCGTGGGCAGTGTaGGTAGAGAGTGGGGCCACCACATCAGGGTTCAGCTGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: SGRDSPNAVKSSWAV*VESGATTSGFSCGW
Trigger: CCAGCCACAGCTGAACCCTGATGTGGTGGCCCCACTCTCTACCCACACTGCCCACGAGGACTTCACAGCATTTGGAGAGTCTCGACCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145618.2
CDS-3UTR CAA 90 bp AGCACTGCCCGTGAGCCCTGCTGCATACCTCCCTCCACACACCAGAGAGGAAGGGCGAGCTGTGGAGAGTaGAGGTGTGCAAAAGCAAGA +
Preference number: 5 (lower is better)
Translates to: STAREPCCIPPSTHQRGRASCGE*RCAKAR
Trigger: TCTTGCTTTTGCACACCTCAACTCTCCACAGCTCGC...CCTTCCTCTCTGGTGTGTGGAGGGAGGTATGCAGCAGGGCTCACGGGCAGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp AGTGCAGGAGCGAGAGGCTTGGAGAGCTGCCTCCCTCCACACACCAGAGAGGAACGCCACACAAAAAGATaGCCAGCCTCATCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: SAGARGLESCLPPHTREERHTKR*PASSRQ
Trigger: CTGCCTGGATGAGGCTGGCAATCTTTTTGTGTGGCG...TTCCTCTCTGGTGTGTGGAGGGAGGCAGCTCTCCAAGCCTCTCGCTCCTGCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp CCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGCTGGTTACCACAAAAGCCTTGCTTGATTaGGCTGACATCCACAGGCCA +
Preference number: 5 (lower is better)
Translates to: PKKAHYVPWARLTLLVTTKALLD*ADIHRP
Trigger: TGGCCTGTGGATGTCAGCCAAATCAAGCAAGGCTTT...TGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp GCGCTAGAGCGGCGGCGAGCAACACAGGGGCTGGAGCTGGAGCCAGTGCAGGAGACAATAAAGCCTTGCTaGATTTGGCTGACATCCACA +
Preference number: 5 (lower is better)
Translates to: ALERRRATQGLELEPVQETIKPC*IWLTST
Trigger: TGTGGATGTCAGCCAAATCAAGCAAGGCTTTATTGT...CTCCTGCACTGGCTCCAGCTCCAGCCCCTGTGTTGCTCGCCGCCGCTCTAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp ACACTCACAGGAGCGCCACAGAGGATGTGCAAATTATCTGGGTGTGGGGCGCGGCTTGACTGTCAGGGGTaGCAACTTCCTGGGTCAGGG +
Preference number: 5 (lower is better)
Translates to: TLTGAPQRMCKLSGCGARLDCQG*QLPGSG
Trigger: CCCTGACCCAGGAAGTTGCAACCCCTGACAGTCAAG...CCGCGCCCCACACCCAGATAATTTGCACATCCTCTGTGGCGCTCCTGTGAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp AGGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTCGTGGAGTAGGAATTTaGCTGCCAAAACCTCCTGAG +
Preference number: 5 (lower is better)
Translates to: RHGRTQEGTLRALGPPDPRGVGI*LPKPPE
Trigger: CTCAGGAGGTTTTGGCAGCAAAATTCCTACTCCACG...AGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp GGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGACACTCACTTCACCCTaGACAATGCGCTGTACTTGT +
Preference number: 5 (lower is better)
Translates to: GMVGPKKAHYVPWARLTLTLTSP*TMRCTC
Trigger: ACAAGTACAGCGCATTGTCAAGGGTGAAGTGAGTGT...CAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp GGCAGCCTCCCACCTGCCGGTACCTGCAGACAGTCTGTAGCTCGCCTCCTCGACACACTCACTTCACCCTaGACAATGCGCTGTACTTGT +
Preference number: 5 (lower is better)
Translates to: GSLPPAGTCRQSVARLLDTLTSP*TMRCTC
Trigger: ACAAGTACAGCGCATTGTCAAGGGTGAAGTGAGTGT...GTCGAGGAGGCGAGCTACAGACTGTCTGCAGGTACCGGCAGGTGGGAGGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp GTGTCTCCTGGTTGGTCTCTGGGCCAGCAATCCGCTCCCGAACACTCACAGGAGCAAGATATGGGCTTGTaGGGCCTGGCAGTCAAGGTG +
Preference number: 5 (lower is better)
Translates to: VSPGWSLGQQSAPEHSQEQDMGL*GLAVKV
Trigger: CACCTTGACTGCCAGGCCCAACAAGCCCATATCTTG...CTCCTGTGAGTGTTCGGGAGCGGATTGCTGGCCCAGAGACCAACCAGGAGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp GGCATGGTAGGACCCAAGAAGGCACACTACGTGCCCTGGGCCCGCCTGACCCTGACATACAGCACCAGATaGAGATCAGCAGCAGTCAGT +
Preference number: 5 (lower is better)
Translates to: GMVGPKKAHYVPWARLTLTYSTR*RSAAVS
Trigger: ACTGACTGCTGCTGATCTCAATCTGGTGCTGTATGT...CAGGGTCAGGCGGGCCCAGGGCACGTAGTGTGCCTTCTTGGGTCCTACCATGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS TCA 90 bp GTGCTACAGGTCTCACGAGTAATGTCAGGTGCCGTAGGCCAGACTTaGCTGTCAGGGGTTGCAACTTCCTGGGTCAGGGCTGCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: VLQVSRVMSGAVGQT*LSGVATSWVRAASS
Trigger: GCTGGAAGCAGCCCTGACCCAGGAAGTTGCAACCCCTGACAGTCAAGTCTGGCCTACGGCACCTGACATTACTCGTGAGACCTGTAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
CDS TCA 90 bp TTGTGTGGATCAGCCTGCAGGAACTGGAAGAGCTTCTGGCGCACCTaGGCCATGACAGAGCCCATGTGGTCTCGAGTGATGGGATCGCTG +
Preference number: 5 (lower is better)
Translates to: LCGSACRNWKSFWRT*AMTEPMWSRVMGSL
Trigger: CAGCGATCCCATCACTCGAGACCACATGGGCTCTGTCATGGCTCAGGTGCGCCAGAAGCTCTTCCAGTTCCTGCAGGCTGATCCACACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS GCA 90 bp AGGAGCTGCTCACAGCAGACACAGCTGTTAGAGAGCTGCTGCTGCTaGTGCTGCTGCTACTGCTGCTGCTGCTACTGCTGCTGCTACTAC +
Preference number: 5 (lower is better)
Translates to: RSCSQQTQLLESCCC*CCCYCCCCYCCCYY
Trigger: GTAGTAGCAGCAGCAGTAGCAGCAGCAGCAGTAGCAGCAGCAGCAGCAGCAGCAGCTCTCTAACAGCTGTGTCTGCTGTGAGCAGCTCCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
ENSMUST00000145618.2
CDS GCA 90 bp ACGAGTAATGTCAGGTGCCGTAGGCCAGACTTGACTGTCAGGGGTTaGAACTTCCTGGGTCAGGGCTGCTTCCAGCAGGGAAGGGGTACT +
Preference number: 5 (lower is better)
Translates to: TSNVRCRRPDLTVRG*NFLGQGCFQQGRGT
Trigger: AGTACCCCTTCCCTGCTGGAAGCAGCCCTGACCCAGGAAGTTGCAACCCCTGACAGTCAAGTCTGGCCTACGGCACCTGACATTACTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
CDS CCA 90 bp AGACTCTCCAAATGTGAAGTCCTCGTGGGCAGTGTGGGTAGAGAGTaGGGCCACCACATCAGGGTTCAGCTGTGGCTGGAAGCGGATCTG +
Preference number: 5 (lower is better)
Translates to: RLSKCEVLVGSVGRE*GHHIRVQLWLEADL
Trigger: CAGATCCGCTTCCAGCCACAGCTGAACCCTGATGTGGTGGCCCCACTCTCTACCCACACTGCCCACGAGGACTTCACATTTGGAGAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
CDS CCA 90 bp AGTTCAGGTCGAGACTCTCCAAATGTGAAGTCCTCGTGGGCAGTGTaGGTAGAGAGTGGGGCCACCACATCAGGGTTCAGCTGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: SSGRDSPNVKSSWAV*VESGATTSGFSCGW
Trigger: CCAGCCACAGCTGAACCCTGATGTGGTGGCCCCACTCTCTACCCACACTGCCCACGAGGACTTCACATTTGGAGAGTCTCGACCTGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
CDS CCA 90 bp CCAAAGCCACGGGACAGGGCCTCAGATGCGATTTCAGGAATGTCCTaGGACAGGGCAGTGGATGCTGAGGAGATCACATCAGGAGAACGG +
Preference number: 5 (lower is better)
Translates to: PKPRDRASDAISGMS*DRAVDAEEITSGER
Trigger: CCGTTCTCCTGATGTGATCTCCTCAGCATCCACTGCCCTGTCCCAGGACATTCCTGAAATCGCATCTGAGGCCCTGTCCCGTGGCTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp GTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCAGGCTGGATTTTCACCTaGTTGCTCCCCCGAGCCTTG +
Preference number: 5 (lower is better)
Translates to: VVSRSWGHASGMVGPKKAGWIFT*LLPRAL
Trigger: CAAGGCTCGGGGGAGCAACAAGGTGAAAATCCAGCC...TGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp GTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACTGCCTGTGAAACCTTaGAGCAGGGTCCGCTCCGAA +
Preference number: 5 (lower is better)
Translates to: VVSRSWGHASGMVGPKKALPVKP*SRVRSE
Trigger: TTCGGAGCGGACCCTGCTCAAAGGTTTCACAGGCAG...TGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp GGCGCCAGTGGCAGTGGCAGCAGTTGCACATCATCCCTGGCTGTAAGCCTAGTGGCGAGCTGTGGAGAGTaGAGGTGTGCAAAAGCAAGA +
Preference number: 5 (lower is better)
Translates to: GASGSGSSCTSSLAVSLVASCGE*RCAKAR
Trigger: TCTTGCTTTTGCACACCTCAACTCTCCACAGCTCGC...CACTAGGCTTACAGCCAGGGATGATGTGCAACTGCTGCCACTGCCACTGGCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp GTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACCCTTGGAAATCAACTaGTCAGCTGGGCCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: VVSRSWGHASGMVGPKKAPLEIN*SAGPGS
Trigger: GCTCCCAGGCCCAGCTGACAAGTTGATTTCCAAGGG...TGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp AGCACTGCCCGTGAGCCCTGCTGCATACCTCCCTCCACACACCAGAGAGGAAGGCACTTTGCTCAGCACTaGTGTCCTGACTGTCACGTT +
Preference number: 5 (lower is better)
Translates to: STAREPCCIPPSTHQRGRHFAQH*CPDCHV
Trigger: AACGTGACAGTCAGGACACAAGTGCTGAGCAAAGTG...CCTTCCTCTCTGGTGTGTGGAGGGAGGTATGCAGCAGGGCTCACGGGCAGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp CACAGCGGTTTGGGCCCTCAGAGGCCACTGCGAGTGGTAGTAGCAGCAACAGCGCGTGGAGTAGGAATTTaGCTGCCAAAACCTCCTGAG +
Preference number: 5 (lower is better)
Translates to: HSGLGPQRPLRVVVAATARGVGI*LPKPPE
Trigger: CTCAGGAGGTTTTGGCAGCAAAATTCCTACTCCACG...CGCTGTTGCTGCTACTACCACTCGCAGTGGCCTCTGAGGGCCCAAACCGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp GCCTCCTCGACCCATGCCATCCCCCAGGCGGATGAGACATTCAGCAAAGCCTTGTTCGTCTTCCAATCCTaGGAAGGCAGCCGTGGAGTA +
Preference number: 5 (lower is better)
Translates to: ASSTHAIPQADETFSKALFVFQS*EGSRGV
Trigger: TACTCCACGGCTGCCTTCCAAGGATTGGAAGACGAA...CAAGGCTTTGCTGAATGTCTCATCCGCCTGGGGGATGGCATGGGTCGAGGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp GCGCCACAGAGGATGTGCAAATTATCTGGGTGTGGGGCGCGGCGAGCTTCTTGCAGCAGTTCTTCTTGGTaGTGCCATAGCTCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: APQRMCKLSGCGARRASCSSSSW*CHSSAS
Trigger: GCTGGCAGAGCTATGGCACAACCAAGAAGAACTGCT...GCAAGAAGCTCGCCGCGCCCCACACCCAGATAATTTGCACATCCTCTGTGGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp GTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACACGGTAGGCAGCCTGCATaGGTCCCTGTAACGTGTCTG +
Preference number: 5 (lower is better)
Translates to: VSRSWGHASGMVGPKKAHGRQPA*VPVTCL
Trigger: CAGACACGTTACAGGGACCAATGCAGGCTGCCTACC...GTGTGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp GGATGTGCAAATTATCTGGGTGTGGGGCGCGGCGAGCTTCTTGCTGCAGTGACTGGTAGGCAGCCTGCATaGGTCCCTGTAACGTGTCTG +
Preference number: 5 (lower is better)
Translates to: GCANYLGVGRGELLAAVTGRQPA*VPVTCL
Trigger: CAGACACGTTACAGGGACCAATGCAGGCTGCCTACC...AGTCACTGCAGCAAGAAGCTCGCCGCGCCCCACACCCAGATAATTTGCACATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp GTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACACAGGCGGCGGGCAGCTTaGCTAAGTGAGTTGTGTGGA +
Preference number: 5 (lower is better)
Translates to: VSRSWGHASGMVGPKKAHRRRAA*LSELCG
Trigger: TCCACACAACTCACTTAGCAAAGCTGCCCGCCGCCT...GTGTGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS CCA 90 bp GCTGAGGAGATCACATCAGGAGAACGGGTTCGACTTGGGGAGGCCTaGGGTAGCCCTAATGGCTCCACTTCCTGCAAATCCAAGGACAGT +
Preference number: 5 (lower is better)
Translates to: AEEITSGERVRLGEA*GSPNGSTSCKSKDS
Trigger: ACTGTCCTTGGATTTGCAGGAAGTGGAGCCATTAGGGCTACCCCAGGCCTCCCCAAGTCGAACCCGTTCTCCTGATGTGATCTCCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
CDS CCA 90 bp ACAGGGCCTCAGATGCGATTTCAGGAATGTCCTGGGACAGGGCAGTaGATGCTGAGGAGATCACATCAGGAGAACGGGTTCGACTTGGGG +
Preference number: 5 (lower is better)
Translates to: TGPQMRFQECPGTGQ*MLRRSHQENGFDLG
Trigger: CCCCAAGTCGAACCCGTTCTCCTGATGTGATCTCCTCAGCATCCACTGCCCTGTCCCAGGACATTCCTGAAATCGCATCTGAGGCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp ATATGGTATCACAGCGGTTTGGGCCCTCAGAGGCCACTGCGAGTGGTAGTAGCAGGCTGGATTTTCACCTaGTTGCTCCCCCGAGCCTTG +
Preference number: 5 (lower is better)
Translates to: IWYHSGLGPQRPLRVVVAGWIFT*LLPRAL
Trigger: CAAGGCTCGGGGGAGCAACAAGGTGAAAATCCAGCC...TGCTACTACCACTCGCAGTGGCCTCTGAGGGCCCAAACCGCTGTGATACCATAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp CCCTGGGCCCGCCTGACCCTGCTGGTTACCACAATCAGTAGAGCACTGCCCGTGCACCACAATAAAGCCTaGCTTGATTTGGCTGACATC +
Preference number: 5 (lower is better)
Translates to: PWARLTLLVTTISRALPVHHNKA*LDLADI
Trigger: GATGTCAGCCAAATCAAGCAAGGCTTTATTGTGGTG...CACGGGCAGTGCTCTACTGATTGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp ACACTCACAGGAGCGCCACAGAGGATGTGCAAATTATCTGGGTGTGGGGCGCGGAGGTCCAAACAAACTTaGAGGCTGGGAGGCACACTC +
Preference number: 5 (lower is better)
Translates to: TLTGAPQRMCKLSGCGARRSKQT*RLGGTL
Trigger: GAGTGTGCCTCCCAGCCTCAAAGTTTGTTTGGACCT...CCGCGCCCCACACCCAGATAATTTGCACATCCTCTGTGGCGCTCCTGTGAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp ACACTCACAGGAGCGCCACAGAGGATGTGCAAATTATCTGGGTGTGGGGCGCGGGTCATCAACTTGGGCTaGGTCTCACTGCTCAGACTG +
Preference number: 5 (lower is better)
Translates to: TLTGAPQRMCKLSGCGARVINLG*VSLLRL
Trigger: CAGTCTGAGCAGTGAGACCAAGCCCAAGTTGATGAC...CCGCGCCCCACACCCAGATAATTTGCACATCCTCTGTGGCGCTCCTGTGAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp AACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCGGAGGCTTCGAGGGCTaGCCTGCAGGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: NMENSTQVVSRSWGHASGGGFEG*PAGCCC
Trigger: GCAGCAGCAGCCTGCAGGCAAGCCCTCGAAGCCTCC...GCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp GGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTGAGAACGGGTTCGACTaGGGGAGGCCTGGGGTAGCC +
Preference number: 5 (lower is better)
Translates to: GKFNSSGVTILGSRFRHGENGFD*GRPGVA
Trigger: GGCTACCCCAGGCCTCCCCAAGTCGAACCCGTTCTC...ACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp GGCGCCAGTGGCAGTGGCAGCAGTTGCACATCATCCCTGGCTGTAAGCCTAGTGCACTTTGCTCAGCACTaGTGTCCTGACTGTCACGTT +
Preference number: 5 (lower is better)
Translates to: GASGSGSSCTSSLAVSLVHFAQH*CPDCHV
Trigger: AACGTGACAGTCAGGACACAAGTGCTGAGCAAAGTG...CACTAGGCTTACAGCCAGGGATGATGTGCAACTGCTGCCACTGCCACTGGCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp AAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCCAGCTGCCCACCCCGTaGCTGCCCCTCAGCCAGTGC +
Preference number: 5 (lower is better)
Translates to: KEHGKFNSSGVTILGSRFQLPTP*LPLSQC
Trigger: GCACTGGCTGAGGGGCAGCAACGGGGTGGGCAGCTG...GAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp CCCGTGAGCCCTGCTGCATACCTCCCTCCACACACCAGAGAGGAAGGCCTGAGCAGCCTAAAGCTGTCATaGATTTGCTGGAACATAGCC +
Preference number: 5 (lower is better)
Translates to: PVSPAAYLPPHTREEGLSSLKLS*ICWNIA
Trigger: GGCTATGTTCCAGCAAATCAATGACAGCTTTAGGCT...GCTCAGGCCTTCCTCTCTGGTGTGTGGAGGGAGGTATGCAGCAGGGCTCACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp CACAGCGGTTTGGGCCCTCAGAGGCCACTGCGAGTGGTAGTAGCAGCAACAGCGACATACAGCACCAGATaGAGATCAGCAGCAGTCAGT +
Preference number: 5 (lower is better)
Translates to: HSGLGPQRPLRVVVAATATYSTR*RSAAVS
Trigger: ACTGACTGCTGCTGATCTCAATCTGGTGCTGTATGT...CGCTGTTGCTGCTACTACCACTCGCAGTGGCCTCTGAGGGCCCAAACCGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS TCA 90 bp AAGCATCAGGTGTCATCAACTTGGGCTTGGTCTCACTGCTCAGACTaGGGAAGTCTGCAGGAGCAGGCAGTTCCACAATGCGCCGCAGGT +
Preference number: 5 (lower is better)
Translates to: KHQVSSTWAWSHCSD*GSLQEQAVPQCAAG
Trigger: ACCTGCGGCGCATTGTGGAACTGCCTGCTCCTGCAGACTTCCTCAGTCTGAGCAGTGAGACCAAGCCCAAGTTGATGACACCTGATGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
ENSMUST00000145618.2
CDS GCA 90 bp GCTGCTACTGCTGCTGCTGCTACTGCTGCTGCTACTACTAGGGGATaGAGAGATCTGCTGCAGGGAGGCAGTAGGTGTCATGAAAGCATC +
Preference number: 5 (lower is better)
Translates to: AATAAAATAAATTRG*RDLLQGGSRCHESI
Trigger: GATGCTTTCATGACACCTACTGCCTCCCTGCAGCAGATCTCTGCATCCCCTAGTAGTAGCAGCAGCAGTAGCAGCAGCAGCAGTAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
ENSMUST00000145618.2
CDS GCA 90 bp GGGGCTTTCTGTCAGTGTGCTACAGGTCTCACGAGTAATGTCAGGTaGCGTAGGCCAGACTTGACTGTCAGGGGTTGCAACTTCCTGGGT +
Preference number: 5 (lower is better)
Translates to: GAFCQCATGLTSNVR*RRPDLTVRGCNFLG
Trigger: ACCCAGGAAGTTGCAACCCCTGACAGTCAAGTCTGGCCTACGGCACCTGACATTACTCGTGAGACCTGTAGCACACTGACAGAAAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040254.16
CDS GCA 90 bp AGTTCTTCTTGGTTGTGCCATAGCTCTGCCAGCTCTCTTTGCTGCTaGCAAATTAGTGCTGGCCAGTCTTCAGGGGGCTCTGCCACCTGG +
Preference number: 5 (lower is better)
Translates to: SSSWLCHSSASSLCC*QISAGQSSGGSATW
Trigger: CCAGGTGGCAGAGCCCCCTGAAGACTGGCCAGCACTAATTTGGCAGCAGCAAAGAGAGCTGGCAGAGCTATGGCACAACCAAGAAGAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS GCA 90 bp AGCAGTTCTTCTTGGTTGTGCCATAGCTCTGCCAGCTCTCTTTGCTaGTGCCAAATTAGTGCTGGCCAGTCTTCAGGGGGCTCTGCCACC +
Preference number: 5 (lower is better)
Translates to: SSSSWLCHSSASSLC*CQISAGQSSGGSAT
Trigger: GGTGGCAGAGCCCCCTGAAGACTGGCCAGCACTAATTTGGCAGCAGCAAAGAGAGCTGGCAGAGCTATGGCACAACCAAGAAGAACTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS GCA 90 bp GCTGAACGCATAGCCTGCATGATGCTGGAAGTGACGGTGGCCTGCTaGTCCTTAAGTGCCACACTCACTTCACCCTTGACAATGCGCTGT +
Preference number: 5 (lower is better)
Translates to: AERIACMMLEVTVAC*SLSATLTSPLTMRC
Trigger: ACAGCGCATTGTCAAGGGTGAAGTGAGTGTGGCACTTAAGGAGCAGCAGGCCACCGTCACTTCCAGCATCATGCAGGCTATGCGTTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS GCA 90 bp TGGATTAGGGAAAGGAGAACAGGCTGGGATAGTGGACAGGGCGGCTaGCCAAAAACCTGGGCTGGGTCGACAGTTTCACACACATACAGC +
Preference number: 5 (lower is better)
Translates to: WIRERRTGWDSGQGG*PKTWAGSTVSHTYS
Trigger: GCTGTATGTGTGTGAAACTGTCGACCCAGCCCAGGTTTTTGGGCAGCCGCCCTGTCCACTATCCCAGCCTGTTCTCCTTTCCCTAATCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CCA 90 bp GCGCCACACAAAAAGATTGCCAGCCTCATCCAGGCAGGCGAGCTGTaGAGAGTTGAGGTGTGCAAAAGCAAGATCAGCCACACTGCCTGT +
Preference number: 5 (lower is better)
Translates to: APHKKIASLIQAGEL*RVEVCKSKISHTAC
Trigger: ACAGGCAGTGTGGCTGATCTTGCTTTTGCACACCTCAACTCTCCACAGCTCGCCTGCCTGGATGAGGCTGGCAATCTTTTTGTGTGGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CCA 90 bp AGGAGAACAGGCTGGGATAGTGGACAGGGCGGCTGCCCAAAAACCTaGGCTGGGTCGACAGTTTCACACACATACAGCACCAGATTGAGA +
Preference number: 5 (lower is better)
Translates to: RRTGWDSGQGGCPKT*AGSTVSHTYSTRLR
Trigger: TCTCAATCTGGTGCTGTATGTGTGTGAAACTGTCGACCCAGCCCAGGTTTTTGGGCAGCCGCCCTGTCCACTATCCCAGCCTGTTCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp GGATGTGCAAATTATCTGGGTGTGGGGCGCGGCGAGCTTCTTGCTGCAGTGACTTTGCTCCCCCGAGCCTaGCTGGAAATGCTAGAATCA +
Preference number: 5 (lower is better)
Translates to: GCANYLGVGRGELLAAVTLLPRA*LEMLES
Trigger: TGATTCTAGCATTTCCAGCAAGGCTCGGGGGAGCAA...AGTCACTGCAGCAAGAAGCTCGCCGCGCCCCACACCCAGATAATTTGCACATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp GTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCAAGGTCCAAACAAACTTaGAGGCTGGGAGGCACACTC +
Preference number: 5 (lower is better)
Translates to: VVSRSWGHASGMVGPKKARSKQT*RLGGTL
Trigger: GAGTGTGCCTCCCAGCCTCAAAGTTTGTTTGGACCT...TGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp TTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCTTGACTGTCAGGGGTaGCAACTTCCTGGGTCAGGG +
Preference number: 5 (lower is better)
Translates to: FNSSGVTILGSRFRHGRTLDCQG*QLPGSG
Trigger: CCCTGACCCAGGAAGTTGCAACCCCTGACAGTCAAG...GGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp CCCGTGAGCCCTGCTGCATACCTCCCTCCACACACCAGAGAGGAAGGCCTGAGCTCCCCATCATCCTTCTaGCTTTTTCTCTTGAGCTTA +
Preference number: 5 (lower is better)
Translates to: PVSPAAYLPPHTREEGLSSPSSF*LFLLSL
Trigger: TAAGCTCAAGAGAAAAAGCAAGAAGGATGATGGGGA...GCTCAGGCCTTCCTCTCTGGTGTGTGGAGGGAGGTATGCAGCAGGGCTCACGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp CCTCCCACCTGCCGGTACCTGCAGACAGTCTGTAGCTCGCCTCCTCGACCCATGTCCCCATCATCCTTCTaGCTTTTTCTCTTGAGCTTA +
Preference number: 5 (lower is better)
Translates to: PPTCRYLQTVCSSPPRPMSPSSF*LFLLSL
Trigger: TAAGCTCAAGAGAAAAAGCAAGAAGGATGATGGGGA...CATGGGTCGAGGAGGCGAGCTACAGACTGTCTGCAGGTACCGGCAGGTGGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS TCA 90 bp CTGTGCACCACATCTTCAGCTCTCGATTCTGGTCGGCGCCGGTTATaGGGAACCTCCAGAACGGGACCTCAGGATCCTGTTTCTTATGGT +
Preference number: 5 (lower is better)
Translates to: LCTTSSALDSGRRRL*GTSRTGPQDPVSYG
Trigger: ACCATAAGAAACAGGATCCTGAGGTCCCGTTCTGGAGGTTCCTCATAACCGGCGCCGACCAGAATCGAGAGCTGAAGATGTGGTGCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS TCA 90 bp ACAGGCTCCCTAGCTTCTTGTTCACGGGCCTTCCGGCTCTTCATGTaGCTCTCCAGCTGCTGCAAATATTCCTGTGTGCCCAGCCTAAAG +
Preference number: 5 (lower is better)
Translates to: TGSLASCSRAFRLFM*LSSCCKYSCVPSLK
Trigger: CTTTAGGCTGGGCACACAGGAATATTTGCAGCAGCTGGAGAGTCACATGAAGAGCCGGAAGGCCCGTGAACAAGAAGCTAGGGAGCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS GCA 90 bp TGTACTTGTGCTAAGATTGACTCCTGCAAGCTGCCCACAGCCACATaGAGCTGGTGTTGCACCTCGGCCCGAACACTGCTAGATACAGTG +
Preference number: 5 (lower is better)
Translates to: CTCAKIDSCKLPTAT*SWCCTSARTLLDTV
Trigger: CACTGTATCTAGCAGTGTTCGGGCCGAGGTGCAACACCAGCTGCATGTGGCTGTGGGCAGCTTGCAGGAGTCAATCTTAGCACAAGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS GCA 90 bp TGGCCTTTCTGTCAGTGTGCTACAGGTCTCACGAGTAATGTCAGGTaGCGTAGGCCAGACTTGACTGTCAGGGGTTGCAACTTCCTGGGT +
Preference number: 5 (lower is better)
Translates to: WPFCQCATGLTSNVR*RRPDLTVRGCNFLG
Trigger: ACCCAGGAAGTTGCAACCCCTGACAGTCAAGTCTGGCCTACGGCACCTGACATTACTCGTGAGACCTGTAGCACACTGACAGAAAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119261.8
CDS CCA 90 bp TCACTCTCCTCGGGGATGAAAGGGCACCAGATGATCCTTCGGAAGTaGTTCAGCGCTGTACCCTCTGGCTGCCGGATATGGACTAAAATC +
Preference number: 5 (lower is better)
Translates to: SLSSGMKGHQMILRK*FSAVPSGCRIWTKI
Trigger: GATTTTAGTCCATATCCGGCAGCCAGAGGGTACAGCGCTGAACCACTTCCGAAGGATCATCTGGTGCCCTTTCATCCCCGAGGAGAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CCA 90 bp ATAAAGCCTTGCTTGATTTGGCTGACATCCACAGGCCAGGTGTTGTaGCTGGAGCGAAGCATATCCAAGTCCCACACCTCAGCCCGATCC +
Preference number: 5 (lower is better)
Translates to: IKPCLIWLTSTGQVL*LERSISKSHTSARS
Trigger: GGATCGGGCTGAGGTGTGGGACTTGGATATGCTTCGCTCCAGCCACAACACCTGGCCTGTGGATGTCAGCCAAATCAAGCAAGGCTTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CCA 90 bp CTGAGCTTGAGGTCACTTCTAGTTCCAAGGTCAGATGCTAGCTGCTaGATTAGGGAAAGGAGAACAGGCTGGGATAGTGGACAGGGCGGC +
Preference number: 5 (lower is better)
Translates to: LSLRSLLVPRSDASC*IRERRTGWDSGQGG
Trigger: GCCGCCCTGTCCACTATCCCAGCCTGTTCTCCTTTCCCTAATCCAGCAGCTAGCATCTGACCTTGGAACTAGAAGTGACCTCAAGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp GTGCAGGAGCTGTGGCCCGTAGTGTCTCCTGGTTGGTCTCTGGGCCAGCAATCCACAATTTCCACTTCCTaGGCTAAAATCCCAATGCAG +
Preference number: 5 (lower is better)
Translates to: VQELWPVVSPGWSLGQQSTISTS*AKIPMQ
Trigger: CTGCATTGGGATTTTAGCCAAGGAAGTGGAAATTGT...GGATTGCTGGCCCAGAGACCAACCAGGAGACACTACGGGCCACAGCTCCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp ATGTGCAAATTATCTGGGTGTGGGGCGCGGCGAGCTTCTTGCTGCAGTGACTCCAAAGCCTTGCTTGATTaGGCTGACATCCACAGGCCA +
Preference number: 5 (lower is better)
Translates to: MCKLSGCGARRASCCSDSKALLD*ADIHRP
Trigger: TGGCCTGTGGATGTCAGCCAAATCAAGCAAGGCTTT...GGAGTCACTGCAGCAAGAAGCTCGCCGCGCCCCACACCCAGATAATTTGCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp AGCACTGCCCGTGAGCCCTGCTGCATACCTCCCTCCACACACCAGAGAGGAAGGACAATAAAGCCTTGCTaGATTTGGCTGACATCCACA +
Preference number: 5 (lower is better)
Translates to: STAREPCCIPPSTHQRGRTIKPC*IWLTST
Trigger: TGTGGATGTCAGCCAAATCAAGCAAGGCTTTATTGT...CCTTCCTCTCTGGTGTGTGGAGGGAGGTATGCAGCAGGGCTCACGGGCAGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp AGTGCAGGAGCTGTGGCCCGTAGTGTCTCCTGGTTGGTCTCTGGGCCAGCAATCAAAGCTGTCATTGATTaGCTGGAACATAGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: SAGAVARSVSWLVSGPAIKAVID*LEHSLA
Trigger: TGCCAGGCTATGTTCCAGCAAATCAATGACAGCTTT...GATTGCTGGCCCAGAGACCAACCAGGAGACACTACGGGCCACAGCTCCTGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp TACGTGCCCTGGGCCCGCCTGACCCTGCTGGTTACCACAATCAGTAGAGCACTGAGCCTAAAGCTGTCATaGATTTGCTGGAACATAGCC +
Preference number: 5 (lower is better)
Translates to: YVPWARLTLLVTTISRALSLKLS*ICWNIA
Trigger: GGCTATGTTCCAGCAAATCAATGACAGCTTTAGGCT...CAGTGCTCTACTGATTGTGGTAACCAGCAGGGTCAGGCGGGCCCAGGGCACGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp AGTGCAGGAGCGAGAGGCTTGGAGAGCTGCCTCCCTCCACACACCAGAGAGGAAAGCCTAAAGCTGTCATaGATTTGCTGGAACATAGCC +
Preference number: 5 (lower is better)
Translates to: SAGARGLESCLPPHTREESLKLS*ICWNIA
Trigger: GGCTATGTTCCAGCAAATCAATGACAGCTTTAGGCT...TTCCTCTCTGGTGTGTGGAGGGAGGCAGCTCTCCAAGCCTCTCGCTCCTGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp TTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGATATGGGCTTGTaGGGCCTGGCAGTCAAGGTG +
Preference number: 5 (lower is better)
Translates to: FNSSGVTILGSRFRHGRTQDMGL*GLAVKV
Trigger: CACCTTGACTGCCAGGCCCAACAAGCCCATATCTTG...GGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS TCA 90 bp CTTGGAAGGCAGCCGTGGAGTAGGAATTTTGCTGCCAAAACCTCCTaGGGCAGAGGCAAGGCTGGCAACCTCATCATCATGGTCACTTTG +
Preference number: 5 (lower is better)
Translates to: LGRQPWSRNFAAKTS*GRGKAGNLIIMVTL
Trigger: CAAAGTGACCATGATGATGAGGTTGCCAGCCTTGCCTCTGCCTCAGGAGGTTTTGGCAGCAAAATTCCTACTCCACGGCTGCCTTCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp GGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTTCCACAGGCCAGGTGTaGTGGCTGGAGCGAAGCATA +
Preference number: 5 (lower is better)
Translates to: GKFNSSGVTILGSRFRHGSTGQV*WLERSI
Trigger: TATGCTTCGCTCCAGCCACAACACCTGGCCTGTGGA...ACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp GCAAATTATCTGGGTGTGGGGCGCGGCGAGCTTCTTGCTGCAGTGACTCCCACACACCACAATAAAGCCTaGCTTGATTTGGCTGACATC +
Preference number: 5 (lower is better)
Translates to: ANYLGVGRGELLAAVTPTHHNKA*LDLADI
Trigger: GATGTCAGCCAAATCAAGCAAGGCTTTATTGTGGTG...TGTGGGAGTCACTGCAGCAAGAAGCTCGCCGCGCCCCACACCCAGATAATTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp TTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCAGGTCCAAACAAACTTaGAGGCTGGGAGGCACACTC +
Preference number: 5 (lower is better)
Translates to: FNSSGVTILGSRFRHGRTRSKQT*RLGGTL
Trigger: GAGTGTGCCTCCCAGCCTCAAAGTTTGTTTGGACCT...GGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp GGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTCTTGACTGTCAGGGGTaGCAACTTCCTGGGTCAGGG +
Preference number: 5 (lower is better)
Translates to: GKFNSSGVTILGSRFRHGLDCQG*QLPGSG
Trigger: CCCTGACCCAGGAAGTTGCAACCCCTGACAGTCAAG...ACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp GCCTCCTCGACCCATGCCATCCCCCAGGCGGATGAGACATTCAGCAAAGCCTTGGCATCTGTTAAGTTCTaGGACTTGAGTAGCTTAGAG +
Preference number: 5 (lower is better)
Translates to: ASSTHAIPQADETFSKALASVKF*DLSSLE
Trigger: CTCTAAGCTACTCAAGTCCAAGAACTTAACAGATGC...CAAGGCTTTGCTGAATGTCTCATCCGCCTGGGGGATGGCATGGGTCGAGGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp AACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCAGGCTCCCTAGCTTCTaGTTCACGGGCCTTCCGGCT +
Preference number: 5 (lower is better)
Translates to: NMENSTQVVSRSWGHASGRLPSF*FTGLPA
Trigger: AGCCGGAAGGCCCGTGAACAAGAAGCTAGGGAGCCT...GCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS GCA 90 bp CCTTCACTTAGGCACGTGCTATGGCCTTTCACCACAATAAAGCCTTaGTTGATTTGGCTGACATCCACAGGCCAGGTGTTGTGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: PSLRHVLWPFTTIKP*LIWLTSTGQVLWLE
Trigger: CTCCAGCCACAACACCTGGCCTGTGGATGTCAGCCAAATCAAGCAAGGCTTTATTGTGGTGAAAGGCCATAGCACGTGCCTAAGTGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS GCA 90 bp ACCTTCAATATAGATCTGCCAGAACTTGACAAAGCCATCATGGCTTaGGGTAGCCAGGACAGTCCCATCAGGGGAGAGGGCTCCTTCACT +
Preference number: 5 (lower is better)
Translates to: TFNIDLPELDKAIMA*GSQDSPIRGEGSFT
Trigger: AGTGAAGGAGCCCTCTCCCCTGATGGGACTGTCCTGGCTACCGCAAGCCATGATGGCTTTGTCAAGTTCTGGCAGATCTATATTGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS GCA 90 bp CCTTCAAGCTGGGCACAGAGACGCTGTAGCAGTTCTTCTTGGTTGTaGCATAGCTCTGCCAGCTCTCTTTGCTGCTGCCAAATTAGTGCT +
Preference number: 5 (lower is better)
Translates to: PSSWAQRRCSSSSWL*HSSASSLCCCQISA
Trigger: AGCACTAATTTGGCAGCAGCAAAGAGAGCTGGCAGAGCTATGGCACAACCAAGAAGAACTGCTACAGCGTCTCTGTGCCCAGCTTGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS GCA 90 bp ATTCCTTTCTGTCAGTGTGCTACAGGTCTCACGAGTAATGTCAGGTaGCGTAGGCCAGACTTGACTGTCAGGGGTTGCAACTTCCTGGGT +
Preference number: 5 (lower is better)
Translates to: IPFCQCATGLTSNVR*RRPDLTVRGCNFLG
Trigger: ACCCAGGAAGTTGCAACCCCTGACAGTCAAGTCTGGCCTACGGCACCTGACATTACTCGTGAGACCTGTAGCACACTGACAGAAAGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS CCA 90 bp ACAGTCCCATCAGGGGAGAGGGCTCCTTCACTTAGGCACGTGCTATaGCCTTTCACCACAATAAAGCCTTGCTTGATTTGGCTGACATCC +
Preference number: 5 (lower is better)
Translates to: TVPSGERAPSLRHVL*PFTTIKPCLIWLTS
Trigger: GGATGTCAGCCAAATCAAGCAAGGCTTTATTGTGGTGAAAGGCCATAGCACGTGCCTAAGTGAAGGAGCCCTCTCCCCTGATGGGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp AACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCGGCACTGGATGGCCTTaGGCTTTCGGCATTGGAACC +
Preference number: 5 (lower is better)
Translates to: NMENSTQVVSRSWGHASGGTGWP*AFGIGT
Trigger: GGTTCCAATGCCGAAAGCCAAAGGCCATCCAGTGCC...GCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp GCGGATGAGACATTCAGCAAAGCCTTGGTATATGGTATCACAGCGGTTTGGGCCTGCTCCCAGTCATACTaGGCGACAGGCTGGATTTTC +
Preference number: 5 (lower is better)
Translates to: ADETFSKALVYGITAVWACSQSY*ATGWIF
Trigger: GAAAATCCAGCCTGTCGCCAAGTATGACTGGGAGCA...GGCCCAAACCGCTGTGATACCATATACCAAGGCTTTGCTGAATGTCTCATCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp TTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCACTTTGCTCAGCACTaGTGTCCTGACTGTCACGTT +
Preference number: 5 (lower is better)
Translates to: FNSSGVTILGSRFRHGRTHFAQH*CPDCHV
Trigger: AACGTGACAGTCAGGACACAAGTGCTGAGCAAAGTG...GGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp GGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACAAAAGCTGTCATTGATTaGCTGGAACATAGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: GVTILGSRFRHGRTQEGTKAVID*LEHSLA
Trigger: TGCCAGGCTATGTTCCAGCAAATCAATGACAGCTTT...TGTGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp GGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGAGGCGGCGGGCAGCTTaGCTAAGTGAGTTGTGTGGA +
Preference number: 5 (lower is better)
Translates to: GTWKIQLKWCHDLGVTLQRRRAA*LSELCG
Trigger: TCCACACAACTCACTTAGCAAAGCTGCCCGCCGCCT...CTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS CCA 90 bp AGCACTTGTGTCCTGACTGTCACGTTGCTGCAGCAAGTGATAAGGTaGCCTGTGGAAAGCCAGACTTTTGTGCTTTTCCTGGAGGCCATT +
Preference number: 5 (lower is better)
Translates to: STCVLTVTLLQQVIR*PVESQTFVLFLEAI
Trigger: AATGGCCTCCAGGAAAAGCACAAAAGTCTGGCTTTCCACAGGCCACCTTATCACTTGCTGCAGCAACGTGACAGTCAGGACACAAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp GTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCAACAATTTCCACTTCCTaGGCTAAAATCCCAATGCAG +
Preference number: 5 (lower is better)
Translates to: VVSRSWGHASGMVGPKKATISTS*AKIPMQ
Trigger: CTGCATTGGGATTTTAGCCAAGGAAGTGGAAATTGT...TGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp AACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCACCATTGCTGAGCCATaGTTGGCAGCCCTAATGGCG +
Preference number: 5 (lower is better)
Translates to: NMENSTQVVSRSWGHASGTIAEP*LAALMA
Trigger: CGCCATTAGGGCTGCCAACAATGGCTCAGCAATGGT...GCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp AAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCCTGCCTGTGAAACCTTaGAGCAGGGTCCGCTCCGAA +
Preference number: 5 (lower is better)
Translates to: KEHGKFNSSGVTILGSRFLPVKP*SRVRSE
Trigger: TTCGGAGCGGACCCTGCTCAAAGGTTTCACAGGCAG...GAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp GTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCAACAATAAAGCCTTGCTaGATTTGGCTGACATCCACA +
Preference number: 5 (lower is better)
Translates to: VVSRSWGHASGMVGPKKATIKPC*IWLTST
Trigger: TGTGGATGTCAGCCAAATCAAGCAAGGCTTTATTGT...TGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp GTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTAGGACCCAAGAAGGCACACGCATCTGTTAAGTTCTaGGACTTGAGTAGCTTAGAG +
Preference number: 5 (lower is better)
Translates to: VSRSWGHASGMVGPKKAHASVKF*DLSSLE
Trigger: CTCTAAGCTACTCAAGTCCAAGAACTTAACAGATGC...GTGTGCCTTCTTGGGTCCTACCATGCCTGAAGCGTGACCCCAAGATCGTGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp GGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGCAAGATATGGGCTTGTaGGGCCTGGCAGTCAAGGTG +
Preference number: 5 (lower is better)
Translates to: GTWKIQLKWCHDLGVTLQQDMGL*GLAVKV
Trigger: CACCTTGACTGCCAGGCCCAACAAGCCCATATCTTG...CTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS CCA 90 bp TGTGTGCCCAGCCTAAAGCTGTCATTGATTTGCTGGAACATAGCCTaGCAACTCTTCTCAAAAGCTGGCAGTACCACACTCTGGAAGGCT +
Preference number: 5 (lower is better)
Translates to: CVPSLKLSLICWNIA*QLFSKAGSTTLWKA
Trigger: AGCCTTCCAGAGTGTGGTACTGCCAGCTTTTGAGAAGAGTTGCCAGGCTATGTTCCAGCAAATCAATGACAGCTTTAGGCTGGGCACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp AACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCTTGCTCCCCCGAGCCTaGCTGGAAATGCTAGAATCA +
Preference number: 5 (lower is better)
Translates to: NMENSTQVVSRSWGHASGLLPRA*LEMLES
Trigger: TGATTCTAGCATTTCCAGCAAGGCTCGGGGGAGCAA...GCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp AACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCGTCATCAACTTGGGCTaGGTCTCACTGCTCAGACTG +
Preference number: 5 (lower is better)
Translates to: NMENSTQVVSRSWGHASGVINLG*VSLLRL
Trigger: CAGTCTGAGCAGTGAGACCAAGCCCAAGTTGATGAC...GCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp AACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCTTCGTCTTCCAATCCTaGGAAGGCAGCCGTGGAGTA +
Preference number: 5 (lower is better)
Translates to: NMENSTQVVSRSWGHASGFVFQS*EGSRGV
Trigger: TACTCCACGGCTGCCTTCCAAGGATTGGAAGACGAA...GCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp AAAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTGGTAGGCAGCCTGCATaGGTCCCTGTAACGTGTCTG +
Preference number: 5 (lower is better)
Translates to: KGTWKIQLKWCHDLGVTLGRQPA*VPVTCL
Trigger: CAGACACGTTACAGGGACCAATGCAGGCTGCCTACC...AAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp AAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCTGCTCCCAGTCATACTaGGCGACAGGCTGGATTTTC +
Preference number: 5 (lower is better)
Translates to: KEHGKFNSSGVTILGSRFCSQSY*ATGWIF
Trigger: GAAAATCCAGCCTGTCGCCAAGTATGACTGGGAGCA...GAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp AAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCGCGAGCTGTGGAGAGTaGAGGTGTGCAAAAGCAAGA +
Preference number: 5 (lower is better)
Translates to: KEHGKFNSSGVTILGSRFASCGE*RCAKAR
Trigger: TCTTGCTTTTGCACACCTCAACTCTCCACAGCTCGC...GAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp AAAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCTGCAAGATATGGGCTaGTTGGGCCTGGCAGTCAAG +
Preference number: 5 (lower is better)
Translates to: KGTWKIQLKWCHDLGVTLLQDMG*LGLAVK
Trigger: CTTGACTGCCAGGCCCAACAAGCCCATATCTTGCAG...AAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp AAAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTTTGCTCCCCCGAGCCTaGCTGGAAATGCTAGAATCA +
Preference number: 5 (lower is better)
Translates to: KGTWKIQLKWCHDLGVTLLLPRA*LEMLES
Trigger: TGATTCTAGCATTTCCAGCAAGGCTCGGGGGAGCAA...AAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp GGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATGGTCACCACAATAAAGCCTaGCTTGATTTGGCTGACATC +
Preference number: 5 (lower is better)
Translates to: GKFNSSGVTILGSRFRHGHHNKA*LDLADI
Trigger: GATGTCAGCCAAATCAAGCAAGGCTTTATTGTGGTG...ACCATGCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp GGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGACATACAGCACCAGATaGAGATCAGCAGCAGTCAGT +
Preference number: 5 (lower is better)
Translates to: GTWKIQLKWCHDLGVTLQTYSTR*RSAAVS
Trigger: ACTGACTGCTGCTGATCTCAATCTGGTGCTGTATGT...CTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp AAAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTGCTTTGCTAAGTGAGTaGTGTGGATCAGCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: KGTWKIQLKWCHDLGVTLALLSE*CGSACR
Trigger: CCTGCAGGCTGATCCACACAACTCACTTAGCAAAGC...AAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp GGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGAAAGCTGTCATTGATTaGCTGGAACATAGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: GTWKIQLKWCHDLGVTLQKAVID*LEHSLA
Trigger: TGCCAGGCTATGTTCCAGCAAATCAATGACAGCTTT...CTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS GCA 90 bp ATTGTTGGCAGCCCTAATGGCGTATGCCAAGAAGGAGTTAGACACTaGAATCAGGTTGCCATAGTAGTATTTCTGCTCCCAGTCATACTT +
Preference number: 5 (lower is better)
Translates to: IVGSPNGVCQEGVRH*NQVAIVVFLLPVIL
Trigger: AAGTATGACTGGGAGCAGAAATACTACTATGGCAACCTGATTGCAGTGTCTAACTCCTTCTTGGCATACGCCATTAGGGCTGCCAACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS-3UTR CAA 90 bp AACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCACAATTTCCACTTCCTaGGCTAAAATCCCAATGCAG +
Preference number: 5 (lower is better)
Translates to: NMENSTQVVSRSWGHASGTISTS*AKIPMQ
Trigger: CTGCATTGGGATTTTAGCCAAGGAAGTGGAAATTGT...GCCTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp GGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCAGGCATCTGTTAAGTTCTaGGACTTGAGTAGCTTAGAG +
Preference number: 5 (lower is better)
Translates to: GTWKIQLKWCHDLGVTLQASVKF*DLSSLE
Trigger: CTCTAAGCTACTCAAGTCCAAGAACTTAACAGATGC...CTGAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS-3UTR CAA 90 bp AAGGAACATGGAAAATTCAACTCAAGTGGTGTCACGATCTTGGGGTCACGCTTCTCCCCATCATCCTTCTaGCTTTTTCTCTTGAGCTTA +
Preference number: 5 (lower is better)
Translates to: KEHGKFNSSGVTILGSRFSPSSF*LFLLSL
Trigger: TAAGCTCAAGAGAAAAAGCAAGAAGGATGATGGGGA...GAAGCGTGACCCCAAGATCGTGACACCACTTGAGTTGAATTTTCCATGTTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS GCA 72 bp CTGCAGCTGCCCACCCCGTTGCTGCCCCTCAGCCAGTaGCCGTTCCAGCCGCCGTTGCTCCTGCTCATGCCG +
Preference number: 6 (lower is better)
Translates to: LQLPTPLLPLSQ*PFQPPLLLLMP
Trigger: CGGCATGAGCAGGAGCAACGGCGGCTGGAACGGGCACTGGCTGAGGGGCAGCAACGGGGTGGGCAGCTGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS GCA 72 bp CTGCAGCTGCCCACCCCGTTGCTGCCCCTCAGCCAGTaGCCGTTCCAGCCGCCGTTTACCATGCTGTGCCAC +
Preference number: 6 (lower is better)
Translates to: LQLPTPLLPLSQ*PFQPPFTMLCH
Trigger: GTGGCACAGCATGGTAAACGGCGGCTGGAACGGGCACTGGCTGAGGGGCAGCAACGGGGTGGGCAGCTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS GCA 72 bp GCCAGTGCCCGTTCCAGCCGCCGTTGCTCCTGCTCATaGCGCGTCTCCAGGGCACGCTCTACATGGTCTGTG +
Preference number: 6 (lower is better)
Translates to: ASARSSRRCSCS*RVSRARSTWSV
Trigger: CACAGACCATGTAGAGCGTGCCCTGGAGACGCGGCATGAGCAGGAGCAACGGCGGCTGGAACGGGCACTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS GCA 72 bp CCGGCGGGCCGGTCCAGTTTGAGTATGTCCCGCAGATaGTGCGTGGCGTCCTCAATGTCGATGCTCGCGCAG +
Preference number: 6 (lower is better)
Translates to: PAGRSSLSMSRR*CVASSMSMLAQ
Trigger: CTGCGCGAGCATCGACATTGAGGACGCCACGCAGCATCTGCGGGACATACTCAAACTGGACCGGCCCGCCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS GCA 72 bp CTAGATACAGTGGCCGCCATCTGCTCGGTGGCACTCTaGAGTGTGCTGACCAGGCCCCGAAGCTGGGCCAGC +
Preference number: 6 (lower is better)
Translates to: LDTVAAICSVAL*SVLTRPRSWAS
Trigger: GCTGGCCCAGCTTCGGGGCCTGGTCAGCACACTGCAGAGTGCCACCGAGCAGATGGCGGCCACTGTATCTAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS TCA 72 bp CAGGCAGGACCTCAGTGTGCCGTAGCCGGCAGCGACTaGCAACCTGGATGCCAAAGCTCAGCACAGGGTGGG +
Preference number: 6 (lower is better)
Translates to: QAGPQCAVAGSD*QPGCQSSAQGG
Trigger: CCCACCCTGTGCTGAGCTTTGGCATCCAGGTTGTCAGTCGCTGCCGGCTACGGCACACTGAGGTCCTGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
ENSMUST00000145618.2
CDS GCA 72 bp GCGGGCCGGTCCAGTTTGAGTATGTCCCGCAGATGCTaGGTGGCGTCCTCAATGTCGATGCTCGCGCAGGAG +
Preference number: 6 (lower is better)
Translates to: AGRSSLSMSRRC*VASSMSMLAQE
Trigger: CTCCTGCGCGAGCATCGACATTGAGGACGCCACGCAGCATCTGCGGGACATACTCAAACTGGACCGGCCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS GCA 72 bp CAGCCCGATCCTCATGCAGCAGGGCCACTGTCGGGCTaGTCTCCTCACAACAGTCCTCACTCTCCTCGGGGA +
Preference number: 6 (lower is better)
Translates to: QPDPHAAGPLSG*SPHNSPHSPRG
Trigger: TCCCCGAGGAGAGTGAGGACTGTTGTGAGGAGAGCAGCCCGACAGTGGCCCTGCTGCATGAGGATCGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS GCA 72 bp GGCCCGGAAGGAGGCTTCGAGGGCTTGCCTGCAGGCTaGTGCTGCTGCTGTTTAGCGTCAGGCTGCCATCTA +
Preference number: 6 (lower is better)
Translates to: GPEGGFEGLPAG*CCCCLASGCHL
Trigger: TAGATGGCAGCCTGACGCTAAACAGCAGCAGCAGCAGCCTGCAGGCAAGCCCTCGAAGCCTCCTTCCGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
ENSMUST00000145618.2
CDS GCA 72 bp GACAATGCCTGGGATAGCTGCTGTGTCAGCTGCTCCTaGAGCTGCCCACCCCGTTGCTGCCCCTCAGCCAGT +
Preference number: 6 (lower is better)
Translates to: DNAWDSCCVSCS*SCPPRCCPSAS
Trigger: ACTGGCTGAGGGGCAGCAACGGGGTGGGCAGCTGCAGGAGCAGCTGACACAGCAGCTATCCCAGGCATTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS GCA 72 bp CGCCCAGCCACAGCTGAAGACAATGCCTGGGATAGCTaGTGTGTCAGCTGCTCCTGCAGCTGCCCACCCCGT +
Preference number: 6 (lower is better)
Translates to: RPATAEDNAWDS*CVSCSCSCPPR
Trigger: ACGGGGTGGGCAGCTGCAGGAGCAGCTGACACAGCAGCTATCCCAGGCATTGTCTTCAGCTGTGGCTGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS GCA 72 bp TCGGCCCGAACACTGCTAGATACAGTGGCCGCCATCTaGTCGGTGGCACTCTGCAGTGTGCTGACCAGGCCC +
Preference number: 6 (lower is better)
Translates to: SARTLLDTVAAI*SVALCSVLTRP
Trigger: GGGCCTGGTCAGCACACTGCAGAGTGCCACCGAGCAGATGGCGGCCACTGTATCTAGCAGTGTTCGGGCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS GCA 72 bp CCGGAAGGAGGCTTCGAGGGCTTGCCTGCAGGCTGCTaGTGCTGCTGTTTAGCGTCAGGCTGCCATCTAGCT +
Preference number: 6 (lower is better)
Translates to: PEGGFEGLPAGC*CCCLASGCHLA
Trigger: AGCTAGATGGCAGCCTGACGCTAAACAGCAGCAGCAGCAGCCTGCAGGCAAGCCCTCGAAGCCTCCTTCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
ENSMUST00000145618.2
CDS GCA 72 bp TGGGTCAGGGCTGCTTCCAGCAGGGAAGGGGTACTATaGCTATCCCCATCTCCAGGGCCTCCATCCAGACCC +
Preference number: 6 (lower is better)
Translates to: WVRAASSREGVL*LSPSPGPPSRP
Trigger: GGGTCTGGATGGAGGCCCTGGAGATGGGGATAGGCATAGTACCCCTTCCCTGCTGGAAGCAGCCCTGACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
CDS GCA 72 bp GCTGAAGACAATGCCTGGGATAGCTGCTGTGTCAGCTaGTCCTGCAGCTGCCCACCCCGTTGCTGCCCCTCA +
Preference number: 6 (lower is better)
Translates to: AEDNAWDSCCVS*SCSCPPRCCPS
Trigger: TGAGGGGCAGCAACGGGGTGGGCAGCTGCAGGAGCAGCTGACACAGCAGCTATCCCAGGCATTGTCTTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS GCA 72 bp GAGGGGACAGGTGTGCCAGCAGCTGAACGCATAGCCTaGATGATGCTGGAAGTGACGGTGGCCTGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: EGTGVPAAERIA*MMLEVTVACCS
Trigger: GGAGCAGCAGGCCACCGTCACTTCCAGCATCATGCAGGCTATGCGTTCAGCTGCTGGCACACCTGTCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS GCA 72 bp CCCTCAGCCAGTGCCCGTTCCAGCCGCCGTTTACCATaGTGTGCCACTACCCCAAGGATACGCTCCTGCTCA +
Preference number: 6 (lower is better)
Translates to: PSASARSSRRLP*CATTPRIRSCS
Trigger: TGAGCAGGAGCGTATCCTTGGGGTAGTGGCACAGCATGGTAAACGGCGGCTGGAACGGGCACTGGCTGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS CAA 72 bp CTTTCGGCATTGGAACCTCCGGCGGGCCGGTCCAGTTaGAGTATGTCCCGCAGATGCTGCGTGGCGTCCTCA +
Preference number: 6 (lower is better)
Translates to: LSALEPPAGRSS*SMSRRCCVASS
Trigger: TGAGGACGCCACGCAGCATCTGCGGGACATACTCAAACTGGACCGGCCCGCCGGAGGTTCCAATGCCGAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CAA 72 bp GCCCCGAAGCTGGGCCAGCACAGGCTCCCTAGCTTCTaGTTCACGGGCCTTCCGGCTCTTCATGTGACTCTC +
Preference number: 6 (lower is better)
Translates to: APKLGQHRLPSF*FTGLPALHVTL
Trigger: GAGAGTCACATGAAGAGCCGGAAGGCCCGTGAACAAGAAGCTAGGGAGCCTGTGCTGGCCCAGCTTCGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CAA 90 bp GGCCTTTGGCTTTCGGCATTGGAACCTCCGGCGGGCCGGTCCAGTTaGAGTATGTCCCGCAGATGCTGCGTGGCGTCCTCAATGTCGATG +
Preference number: 6 (lower is better)
Translates to: GLWLSALEPPAGRSS*SMSRRCCVASSMSM
Trigger: CATCGACATTGAGGACGCCACGCAGCATCTGCGGGACATACTCAAACTGGACCGGCCCGCCGGAGGTTCCAATGCCGAAAGCCAAAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS TCA 72 bp TTTCGGCATTGGAACCTCCGGCGGGCCGGTCCAGTTTaGGTATGTCCCGCAGATGCTGCGTGGCGTCCTCAA +
Preference number: 6 (lower is better)
Translates to: FRHWNLRRAGPV*VCPADAAWRPQ
Trigger: TTGAGGACGCCACGCAGCATCTGCGGGACATACTCAAACTGGACCGGCCCGCCGGAGGTTCCAATGCCGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS GCA 72 bp CTGTCATTCTCCTCCTCAGCAGGCAGGACCTCAGTGTaGCGTAGCCGGCAGCGACTGACAACCTGGATGCCA +
Preference number: 6 (lower is better)
Translates to: LSFSSSAGRTSV*RSRQRLTTWMP
Trigger: TGGCATCCAGGTTGTCAGTCGCTGCCGGCTACGGCACACTGAGGTCCTGCCTGCTGAGGAGGAGAATGACAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
ENSMUST00000145618.2
CDS GCA 72 bp GTCAGGTGCCGTAGGCCAGACTTGACTGTCAGGGGTTaGAACTTCCTGGGTCAGGGCTGCTTCCAGCAGGGA +
Preference number: 6 (lower is better)
Translates to: VRCRRPDLTVRG*NFLGQGCFQQG
Trigger: TCCCTGCTGGAAGCAGCCCTGACCCAGGAAGTTGCAACCCCTGACAGTCAAGTCTGGCCTACGGCACCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
CDS GCA 72 bp TCCTGCAAGCTGCCCACAGCCACATGCAGCTGGTGTTaGACCTCGGCCCGAACACTGCTAGATACAGTGGCC +
Preference number: 6 (lower is better)
Translates to: SCKLPTATCSWC*TSARTLLDTVA
Trigger: GGCCACTGTATCTAGCAGTGTTCGGGCCGAGGTGCAACACCAGCTGCATGTGGCTGTGGGCAGCTTGCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS GCA 72 bp TGCTGTGCCACTACCCCAAGGATACGCTCCTGCTCATaGCGCGTCTCCAGGGCACGCTCTACATGGTCTGTG +
Preference number: 6 (lower is better)
Translates to: CCATTPRIRSCS*RVSRARSTWSV
Trigger: CACAGACCATGTAGAGCGTGCCCTGGAGACGCGGCATGAGCAGGAGCGTATCCTTGGGGTAGTGGCACAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS CCA 72 bp TGCAAGATATGGGCTTGTTGGGCCTGGCAGTCAAGGTaGGCAGAGGGGACAGGTGTGCCAGCAGCTGAACGC +
Preference number: 6 (lower is better)
Translates to: CKIWACWAWQSR*AEGTGVPAAER
Trigger: GCGTTCAGCTGCTGGCACACCTGTCCCCTCTGCCCACCTTGACTGCCAGGCCCAACAAGCCCATATCTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CAA 72 bp CTCCTGCAAGCTGCCCACAGCCACATGCAGCTGGTGTaGCACCTCGGCCCGAACACTGCTAGATACAGTGGC +
Preference number: 6 (lower is better)
Translates to: LLQAAHSHMQLV*HLGPNTARYSG
Trigger: GCCACTGTATCTAGCAGTGTTCGGGCCGAGGTGCAACACCAGCTGCATGTGGCTGTGGGCAGCTTGCAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CAA 90 bp GACCAGGAGCCCATTGAGGTCTCCATTGTAGGCACTGGATGGCCTTaGGCTTTCGGCATTGGAACCTCCGGCGGGCCGGTCCAGTTTGAG +
Preference number: 6 (lower is better)
Translates to: DQEPIEVSIVGTGWP*AFGIGTSGGPVQFE
Trigger: CTCAAACTGGACCGGCCCGCCGGAGGTTCCAATGCCGAAAGCCAAAGGCCATCCAGTGCCTACAATGGAGACCTCAATGGGCTCCTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS TCA 72 bp AGTTCCACAATGCGCCGCAGGTCAGGCTGGGAACCATaGGCAGCTGAAGCTAGCCCCTCGGAGCCTAGTTCA +
Preference number: 6 (lower is better)
Translates to: SSTMRRRSGWEP*AAEASPSEPSS
Trigger: TGAACTAGGCTCCGAGGGGCTAGCTTCAGCTGCTCATGGTTCCCAGCCTGACCTGCGGCGCATTGTGGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
ENSMUST00000145618.2
CDS GCA 72 bp GTGGTCTGGGCAAGGAAGGGTCCATGGCTGAGGAGCTaGTCACAGCAGACACAGCTGTTAGAGAGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: VVWARKGPWLRS*SQQTQLLESCC
Trigger: GCAGCAGCTCTCTAACAGCTGTGTCTGCTGTGAGCAGCTCCTCAGCCATGGACCCTTCCTTGCCCAGACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
ENSMUST00000145618.2
CDS GCA 72 bp CTGCTGCTGCTGTTTAGCGTCAGGCTGCCATCTAGCTaGAGCTTGGGGCTCAAGGTCAGCTCCTCAGGTGGT +
Preference number: 6 (lower is better)
Translates to: LLLLFSVRLPSS*SLGLKVSSSGG
Trigger: ACCACCTGAGGAGCTGACCTTGAGCCCCAAGCTGCAGCTAGATGGCAGCCTGACGCTAAACAGCAGCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
ENSMUST00000145618.2
CDS GCA 72 bp TTACCATGCTGTGCCACTACCCCAAGGATACGCTCCTaGTCATGCCGCGTCTCCAGGGCACGCTCTACATGG +
Preference number: 6 (lower is better)
Translates to: LPCCATTPRIRS*SCRVSRARSTW
Trigger: CCATGTAGAGCGTGCCCTGGAGACGCGGCATGAGCAGGAGCGTATCCTTGGGGTAGTGGCACAGCATGGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS CCA 72 bp AGCACACCAGCTGCGGATTCCAAGGCTCCAGCTCCATaGGAACTCTCGGTCCCCAGACTGTCATTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: STPAADSKAPAP*ELSVPRLSFSS
Trigger: GGAGGAGAATGACAGTCTGGGGACCGAGAGTTCCCATGGAGCTGGAGCCTTGGAATCCGCAGCTGGTGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
ENSMUST00000145618.2
CDS CCA 72 bp GTGCAGAGGCAGCAGTGGATACCTGACCAGGTCCCTTaGAAATCAACTTGTCAGCTGGGCCTGGGAGCAGGC +
Preference number: 6 (lower is better)
Translates to: VQRQQWIPDQVP*KSTCQLGLGAG
Trigger: GCCTGCTCCCAGGCCCAGCTGACAAGTTGATTTCCAAGGGACCTGGTCAGGTATCCACTGCTGCCTCTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
CDS CCA 72 bp GGCTGGGATAGTGGACAGGGCGGCTGCCCAAAAACCTaGGCTGGGTCGACAGTTTCACACACATACAGCACC +
Preference number: 6 (lower is better)
Translates to: GWDSGQGGCPKT*AGSTVSHTYST
Trigger: GGTGCTGTATGTGTGTGAAACTGTCGACCCAGCCCAGGTTTTTGGGCAGCCGCCCTGTCCACTATCCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CCA 72 bp TGCTGTGAAGTCCTCGTGGGCAGTGTGGGTAGAGAGTaGGGCCACCACATCAGGGTTCAGCTGTGGCTGGAA +
Preference number: 6 (lower is better)
Translates to: CCEVLVGSVGRE*GHHIRVQLWLE
Trigger: TTCCAGCCACAGCTGAACCCTGATGTGGTGGCCCCACTCTCTACCCACACTGCCCACGAGGACTTCACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145618.2
CDS CAA 90 bp GGGCAGTGGATGCTGAGGAGATCACATCAGGAGAACGGGTTCGACTaGGGGAGGCCTGGGGTAGCCCTAATGGCTCCACTTCCTGCAAAT +
Preference number: 6 (lower is better)
Translates to: GQWMLRRSHQENGFD*GRPGVALMAPLPAN
Trigger: ATTTGCAGGAAGTGGAGCCATTAGGGCTACCCCAGGCCTCCCCAAGTCGAACCCGTTCTCCTGATGTGATCTCCTCAGCATCCACTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
CDS CAA 90 bp CCGTGTAACATTAGGCTGAGGCGGCGGGCAGCTTTGCTAAGTGAGTaGTGTGGATCAGCCTGCAGGAACTGGAAGAGCTTCTGGCGCACC +
Preference number: 6 (lower is better)
Translates to: PCNIRLRRRAALLSE*CGSACRNWKSFWRT
Trigger: GGTGCGCCAGAAGCTCTTCCAGTTCCTGCAGGCTGATCCACACAACTCACTTAGCAAAGCTGCCCGCCGCCTCAGCCTAATGTTACACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS CAA 90 bp GGGGTCACAAGGCCGTGTAACATTAGGCTGAGGCGGCGGGCAGCTTaGCTAAGTGAGTTGTGTGGATCAGCCTGCAGGAACTGGAAGAGC +
Preference number: 6 (lower is better)
Translates to: GVTRPCNIRLRRRAA*LSELCGSACRNWKS
Trigger: GCTCTTCCAGTTCCTGCAGGCTGATCCACACAACTCACTTAGCAAAGCTGCCCGCCGCCTCAGCCTAATGTTACACGGCCTTGTGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS TCA 72 bp TCAGCCTGCAGGAACTGGAAGAGCTTCTGGCGCACCTaGGCCATGACAGAGCCCATGTGGTCTCGAGTGATG +
Preference number: 6 (lower is better)
Translates to: SACRNWKSFWRT*AMTEPMWSRVM
Trigger: CATCACTCGAGACCACATGGGCTCTGTCATGGCTCAGGTGCGCCAGAAGCTCTTCCAGTTCCTGCAGGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS GCA 72 bp TGCTCACAGCAGACACAGCTGTTAGAGAGCTGCTGCTaGTGCTGCTGCTGCTACTGCTGCTGCTGCTACTGC +
Preference number: 6 (lower is better)
Translates to: CSQQTQLLESCC*CCCCYCCCCYC
Trigger: GCAGTAGCAGCAGCAGCAGTAGCAGCAGCAGCAGCAGCAGCAGCTCTCTAACAGCTGTGTCTGCTGTGAGCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
ENSMUST00000145618.2
CDS GCA 72 bp AGCTGCTCACAGCAGACACAGCTGTTAGAGAGCTGCTaGTGCTGCTGCTGCTGCTACTGCTGCTGCTGCTAC +
Preference number: 6 (lower is better)
Translates to: SCSQQTQLLESC*CCCCCYCCCCY
Trigger: GTAGCAGCAGCAGCAGTAGCAGCAGCAGCAGCAGCAGCAGCTCTCTAACAGCTGTGTCTGCTGTGAGCAGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
ENSMUST00000145618.2
CDS GCA 72 bp TTGACTGTCAGGGGTTGCAACTTCCTGGGTCAGGGCTaGTTCCAGCAGGGAAGGGGTACTATGCCTATCCCC +
Preference number: 6 (lower is better)
Translates to: LTVRGCNFLGQG*FQQGRGTMPIP
Trigger: GGGGATAGGCATAGTACCCCTTCCCTGCTGGAAGCAGCCCTGACCCAGGAAGTTGCAACCCCTGACAGTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
CDS GCA 72 bp GCTAAGATTGACTCCTGCAAGCTGCCCACAGCCACATaGAGCTGGTGTTGCACCTCGGCCCGAACACTGCTA +
Preference number: 6 (lower is better)
Translates to: AKIDSCKLPTAT*SWCCTSARTLL
Trigger: TAGCAGTGTTCGGGCCGAGGTGCAACACCAGCTGCATGTGGCTGTGGGCAGCTTGCAGGAGTCAATCTTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS GCA 72 bp GAAAGGAGAACAGGCTGGGATAGTGGACAGGGCGGCTaGCCAAAAACCTGGGCTGGGTCGACAGTTTCACAC +
Preference number: 6 (lower is better)
Translates to: ERRTGWDSGQGG*PKTWAGSTVSH
Trigger: GTGTGAAACTGTCGACCCAGCCCAGGTTTTTGGGCAGCCGCCCTGTCCACTATCCCAGCCTGTTCTCCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS GCA 72 bp GTCTACTGGGCAAGGAAGGGTCCATGGCTGAGGAGCTaGTCACAGCAGACACAGCTGTTAGAGAGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: VYWARKGPWLRS*SQQTQLLESCC
Trigger: GCAGCAGCTCTCTAACAGCTGTGTCTGCTGTGAGCAGCTCCTCAGCCATGGACCCTTCCTTGCCCAGTAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132680.8
CDS CCA 72 bp TCGGGGATGAAAGGGCACCAGATGATCCTTCGGAAGTaGTTCAGCGCTGTACCCTCTGGCTGCCGGATATGG +
Preference number: 6 (lower is better)
Translates to: SGMKGHQMILRK*FSAVPSGCRIW
Trigger: CCATATCCGGCAGCCAGAGGGTACAGCGCTGAACCACTTCCGAAGGATCATCTGGTGCCCTTTCATCCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CCA 72 bp CAGGACACTGTGCACCACATCTTCAGCTCTCGATTCTaGTCGGCGCCGGTTATGAGGAACCTCCAGAACGGG +
Preference number: 6 (lower is better)
Translates to: QDTVHHIFSSRF*SAPVMRNLQNG
Trigger: CCCGTTCTGGAGGTTCCTCATAACCGGCGCCGACCAGAATCGAGAGCTGAAGATGTGGTGCACAGTGTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS CCA 72 bp CGAGACTCTCCAAATGTGAAGTCCTCGTGGGCAGTGTaGGTAGAGAGTGGGGCCACCACATCAGGGTTCAGC +
Preference number: 6 (lower is better)
Translates to: RDSPNVKSSWAV*VESGATTSGFS
Trigger: GCTGAACCCTGATGTGGTGGCCCCACTCTCTACCCACACTGCCCACGAGGACTTCACATTTGGAGAGTCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
CDS CCA 72 bp GACTCTCCAAATGCTGTGAAGTCCTCGTGGGCAGTGTaGGTAGAGAGTGGGGCCACCACATCAGGGTTCAGC +
Preference number: 6 (lower is better)
Translates to: DSPNAVKSSWAV*VESGATTSGFS
Trigger: GCTGAACCCTGATGTGGTGGCCCCACTCTCTACCCACACTGCCCACGAGGACTTCACAGCATTTGGAGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145618.2
CDS CAA 72 bp GGTCTCACGAGTAATGTCAGGTGCCGTAGGCCAGACTaGACTGTCAGGGGTTGCAACTTCCTGGGTCAGGGC +
Preference number: 6 (lower is better)
Translates to: GLTSNVRCRRPD*TVRGCNFLGQG
Trigger: GCCCTGACCCAGGAAGTTGCAACCCCTGACAGTCAAGTCTGGCCTACGGCACCTGACATTACTCGTGAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
CDS CAA 90 bp TGTGCTACAGGTCTCACGAGTAATGTCAGGTGCCGTAGGCCAGACTaGACTGTCAGGGGTTGCAACTTCCTGGGTCAGGGCTGCTTCCAG +
Preference number: 6 (lower is better)
Translates to: CATGLTSNVRCRRPD*TVRGCNFLGQGCFQ
Trigger: CTGGAAGCAGCCCTGACCCAGGAAGTTGCAACCCCTGACAGTCAAGTCTGGCCTACGGCACCTGACATTACTCGTGAGACCTGTAGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
CDS TCA 72 bp GTCTCACGAGTAATGTCAGGTGCCGTAGGCCAGACTTaGCTGTCAGGGGTTGCAACTTCCTGGGTCAGGGCT +
Preference number: 6 (lower is better)
Translates to: VSRVMSGAVGQT*LSGVATSWVRA
Trigger: AGCCCTGACCCAGGAAGTTGCAACCCCTGACAGTCAAGTCTGGCCTACGGCACCTGACATTACTCGTGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
CDS TCA 72 bp CATGCCGCGTCTCCAGGGCACGCTCTACATGGTCTGTaGCAGTACTCTGAAGACCTTCAAGCTGGGCACAGA +
Preference number: 6 (lower is better)
Translates to: HAASPGHALHGL*QYSEDLQAGHR
Trigger: TCTGTGCCCAGCTTGAAGGTCTTCAGAGTACTGTCACAGACCATGTAGAGCGTGCCCTGGAGACGCGGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS GCA 72 bp AGAAGCGAATGGTTTGCAGGCAGGTCCAGGACACTGTaGACCACATCTTCAGCTCTCGATTCTGGTCGGCGC +
Preference number: 6 (lower is better)
Translates to: RSEWFAGRSRTL*TTSSALDSGRR
Trigger: GCGCCGACCAGAATCGAGAGCTGAAGATGTGGTGCACAGTGTCCTGGACCTGCCTGCAAACCATTCGCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS GCA 72 bp TGCGCTGTACTTGTGCTAAGATTGACTCCTGCAAGCTaGCCACAGCCACATGCAGCTGGTGTTGCACCTCGG +
Preference number: 6 (lower is better)
Translates to: CAVLVLRLTPAS*PQPHAAGVAPR
Trigger: CCGAGGTGCAACACCAGCTGCATGTGGCTGTGGGCAGCTTGCAGGAGTCAATCTTAGCACAAGTACAGCGCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS GCA 72 bp CGCATAGCCTGCATGATGCTGGAAGTGACGGTGGCCTaGTGCTCCTTAAGTGCCACACTCACTTCACCCTTG +
Preference number: 6 (lower is better)
Translates to: RIACMMLEVTVA*CSLSATLTSPL
Trigger: CAAGGGTGAAGTGAGTGTGGCACTTAAGGAGCAGCAGGCCACCGTCACTTCCAGCATCATGCAGGCTATGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CCA 72 bp GAGAGTGGGGCCACCACATCAGGGTTCAGCTGTGGCTaGAAGCGGATCTGCACATCTTGTAGTGCCTTAGTG +
Preference number: 6 (lower is better)
Translates to: ESGATTSGFSCG*KRICTSCSALV
Trigger: CACTAAGGCACTACAAGATGTGCAGATCCGCTTCCAGCCACAGCTGAACCCTGATGTGGTGGCCCCACTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
ENSMUST00000145618.2
CDS CCA 72 bp AAATGTGAAGTCCTCGTGGGCAGTGTGGGTAGAGAGTaGGGCCACCACATCAGGGTTCAGCTGTGGCTGGAA +
Preference number: 6 (lower is better)
Translates to: KCEVLVGSVGRE*GHHIRVQLWLE
Trigger: TTCCAGCCACAGCTGAACCCTGATGTGGTGGCCCCACTCTCTACCCACACTGCCCACGAGGACTTCACATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
CDS CCA 72 bp ATTGACTCCTGCAAGCTGCCCACAGCCACATGCAGCTaGTGTTGCACCTCGGCCCGAACACTGCTAGATACA +
Preference number: 6 (lower is better)
Translates to: IDSCKLPTATCS*CCTSARTLLDT
Trigger: TGTATCTAGCAGTGTTCGGGCCGAGGTGCAACACCAGCTGCATGTGGCTGTGGGCAGCTTGCAGGAGTCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CAA 72 bp ATGCTGAGGAGATCACATCAGGAGAACGGGTTCGACTaGGGGAGGCCTGGGGTAGCCCTAATGGCTCCACTT +
Preference number: 6 (lower is better)
Translates to: MLRRSHQENGFD*GRPGVALMAPL
Trigger: AAGTGGAGCCATTAGGGCTACCCCAGGCCTCCCCAAGTCGAACCCGTTCTCCTGATGTGATCTCCTCAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
CDS CAA 72 bp GGTGACGTCCGAGGGGATCCCTTCGTCTTCCAATCCTaGGAAGGCAGCCGTGGAGTAGGAATTTTGCTGCCA +
Preference number: 6 (lower is better)
Translates to: GDVRGDPFVFQS*EGSRGVGILLP
Trigger: TGGCAGCAAAATTCCTACTCCACGGCTGCCTTCCAAGGATTGGAAGACGAAGGGATCCCCTCGGACGTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CAA 72 bp AGGCCGTGTAACATTAGGCTGAGGCGGCGGGCAGCTTaGCTAAGTGAGTTGTGTGGATCAGCCTGCAGGAAC +
Preference number: 6 (lower is better)
Translates to: RPCNIRLRRRAA*LSELCGSACRN
Trigger: GTTCCTGCAGGCTGATCCACACAACTCACTTAGCAAAGCTGCCCGCCGCCTCAGCCTAATGTTACACGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS CAA 90 bp CCCTTCGTCTTCCAATCCTTGGAAGGCAGCCGTGGAGTAGGAATTTaGCTGCCAAAACCTCCTGAGGCAGAGGCAAGGCTGGCAACCTCA +
Preference number: 6 (lower is better)
Translates to: PFVFQSLEGSRGVGI*LPKPPEAEARLATS
Trigger: TGAGGTTGCCAGCCTTGCCTCTGCCTCAGGAGGTTTTGGCAGCAAAATTCCTACTCCACGGCTGCCTTCCAAGGATTGGAAGACGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS TCA 72 bp ACATCTTCAGCTCTCGATTCTGGTCGGCGCCGGTTATaGGGAACCTCCAGAACGGGACCTCAGGATCCTGTT +
Preference number: 6 (lower is better)
Translates to: TSSALDSGRRRL*GTSRTGPQDPV
Trigger: AACAGGATCCTGAGGTCCCGTTCTGGAGGTTCCTCATAACCGGCGCCGACCAGAATCGAGAGCTGAAGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS GCA 72 bp ATAGATCTGCCAGAACTTGACAAAGCCATCATGGCTTaGGGTAGCCAGGACAGTCCCATCAGGGGAGAGGGC +
Preference number: 6 (lower is better)
Translates to: IDLPELDKAIMA*GSQDSPIRGEG
Trigger: GCCCTCTCCCCTGATGGGACTGTCCTGGCTACCGCAAGCCATGATGGCTTTGTCAAGTTCTGGCAGATCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS GCA 72 bp TGGTTGTGCCATAGCTCTGCCAGCTCTCTTTGCTGCTaGCAAATTAGTGCTGGCCAGTCTTCAGGGGGCTCT +
Preference number: 6 (lower is better)
Translates to: WLCHSSASSLCC*QISAGQSSGGS
Trigger: AGAGCCCCCTGAAGACTGGCCAGCACTAATTTGGCAGCAGCAAAGAGAGCTGGCAGAGCTATGGCACAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS GCA 72 bp TCTTGGTTGTGCCATAGCTCTGCCAGCTCTCTTTGCTaGTGCCAAATTAGTGCTGGCCAGTCTTCAGGGGGC +
Preference number: 6 (lower is better)
Translates to: SWLCHSSASSLC*CQISAGQSSGG
Trigger: GCCCCCTGAAGACTGGCCAGCACTAATTTGGCAGCAGCAAAGAGAGCTGGCAGAGCTATGGCACAACCAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS GCA 72 bp GATGCTGGAAGTGACGGTGGCCTGCTGCTCCTTAAGTaGCACACTCACTTCACCCTTGACAATGCGCTGTAC +
Preference number: 6 (lower is better)
Translates to: DAGSDGGLLLLK*HTHFTLDNALY
Trigger: GTACAGCGCATTGTCAAGGGTGAAGTGAGTGTGGCACTTAAGGAGCAGCAGGCCACCGTCACTTCCAGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CAA 72 bp CCTTGCTTGATTTGGCTGACATCCACAGGCCAGGTGTaGTGGCTGGAGCGAAGCATATCCAAGTCCCACACC +
Preference number: 6 (lower is better)
Translates to: PCLIWLTSTGQV*WLERSISKSHT
Trigger: GGTGTGGGACTTGGATATGCTTCGCTCCAGCCACAACACCTGGCCTGTGGATGTCAGCCAAATCAAGCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CAA 72 bp AGCTGGGCACAGAGACGCTGTAGCAGTTCTTCTTGGTaGTGCCATAGCTCTGCCAGCTCTCTTTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: SWAQRRCSSSSW*CHSSASSLCCC
Trigger: GCAGCAGCAAAGAGAGCTGGCAGAGCTATGGCACAACCAAGAAGAACTGCTACAGCGTCTCTGTGCCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CAA 72 bp GCTGGGTCGACAGTTTCACACACATACAGCACCAGATaGAGATCAGCAGCAGTCAGTGCCTGCTGGAAGGCC +
Preference number: 6 (lower is better)
Translates to: AGSTVSHTYSTR*RSAAVSACWKA
Trigger: GGCCTTCCAGCAGGCACTGACTGCTGCTGATCTCAATCTGGTGCTGTATGTGTGTGAAACTGTCGACCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CAA 72 bp ATTAGGCTGAGGCGGCGGGCAGCTTTGCTAAGTGAGTaGTGTGGATCAGCCTGCAGGAACTGGAAGAGCTTC +
Preference number: 6 (lower is better)
Translates to: IRLRRRAALLSE*CGSACRNWKSF
Trigger: GAAGCTCTTCCAGTTCCTGCAGGCTGATCCACACAACTCACTTAGCAAAGCTGCCCGCCGCCTCAGCCTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS CAA 90 bp TTGAGGTGTGCAAAAGCAAGATCAGCCACACTGCCTGTGAAACCTTaGAGCAGGGTCCGCTCCGAAGTGCTGACACTGATCACACGGACC +
Preference number: 6 (lower is better)
Translates to: LRCAKARSATLPVKP*SRVRSEVLTLITRT
Trigger: GGTCCGTGTGATCAGTGTCAGCACTTCGGAGCGGACCCTGCTCAAAGGTTTCACAGGCAGTGTGGCTGATCTTGCTTTTGCACACCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS TCA 72 bp CTCCGAAGTGCTGACACTGATCACACGGACCATTGCTaGGCCATTGTTGGCAGCCCTAATGGCGTATGCCAA +
Preference number: 6 (lower is better)
Translates to: LRSADTDHTDHC*AIVGSPNGVCQ
Trigger: TTGGCATACGCCATTAGGGCTGCCAACAATGGCTCAGCAATGGTCCGTGTGATCAGTGTCAGCACTTCGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS TCA 72 bp CTAGCTTCTTGTTCACGGGCCTTCCGGCTCTTCATGTaGCTCTCCAGCTGCTGCAAATATTCCTGTGTGCCC +
Preference number: 6 (lower is better)
Translates to: LASCSRAFRLFM*LSSCCKYSCVP
Trigger: GGGCACACAGGAATATTTGCAGCAGCTGGAGAGTCACATGAAGAGCCGGAAGGCCCGTGAACAAGAAGCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS TCA 72 bp CTGGGTCGACAGTTTCACACACATACAGCACCAGATTaGGATCAGCAGCAGTCAGTGCCTGCTGGAAGGCCT +
Preference number: 6 (lower is better)
Translates to: LGRQFHTHTAPD*DQQQSVPAGRP
Trigger: AGGCCTTCCAGCAGGCACTGACTGCTGCTGATCTCAATCTGGTGCTGTATGTGTGTGAAACTGTCGACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS GCA 72 bp CTGCTGCTGCTACTACTAGGGGATGCAGAGATCTGCTaGAGGGAGGCAGTAGGTGTCATGAAAGCATCAGGT +
Preference number: 6 (lower is better)
Translates to: LLLLLLGDAEIC*REAVGVMKASG
Trigger: ACCTGATGCTTTCATGACACCTACTGCCTCCCTGCAGCAGATCTCTGCATCCCCTAGTAGTAGCAGCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
ENSMUST00000145618.2
CDS GCA 72 bp TGTCAGTGTGCTACAGGTCTCACGAGTAATGTCAGGTaGCGTAGGCCAGACTTGACTGTCAGGGGTTGCAAC +
Preference number: 6 (lower is better)
Translates to: CQCATGLTSNVR*RRPDLTVRGCN
Trigger: GTTGCAACCCCTGACAGTCAAGTCTGGCCTACGGCACCTGACATTACTCGTGAGACCTGTAGCACACTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CCA 72 bp TGCTTGATTTGGCTGACATCCACAGGCCAGGTGTTGTaGCTGGAGCGAAGCATATCCAAGTCCCACACCTCA +
Preference number: 6 (lower is better)
Translates to: CLIWLTSTGQVL*LERSISKSHTS
Trigger: TGAGGTGTGGGACTTGGATATGCTTCGCTCCAGCCACAACACCTGGCCTGTGGATGTCAGCCAAATCAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CCA 72 bp TCAAGCTGGGCACAGAGACGCTGTAGCAGTTCTTCTTaGTTGTGCCATAGCTCTGCCAGCTCTCTTTGCTGC +
Preference number: 6 (lower is better)
Translates to: SSWAQRRCSSSS*LCHSSASSLCC
Trigger: GCAGCAAAGAGAGCTGGCAGAGCTATGGCACAACCAAGAAGAACTGCTACAGCGTCTCTGTGCCCAGCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CAA 72 bp GTGCTGACACTGATCACACGGACCATTGCTGAGCCATaGTTGGCAGCCCTAATGGCGTATGCCAAGAAGGAG +
Preference number: 6 (lower is better)
Translates to: VLTLITRTIAEP*LAALMAYAKKE
Trigger: CTCCTTCTTGGCATACGCCATTAGGGCTGCCAACAATGGCTCAGCAATGGTCCGTGTGATCAGTGTCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CAA 72 bp GCAAAAGCAAGATCAGCCACACTGCCTGTGAAACCTTaGAGCAGGGTCCGCTCCGAAGTGCTGACACTGATC +
Preference number: 6 (lower is better)
Translates to: AKARSATLPVKP*SRVRSEVLTLI
Trigger: GATCAGTGTCAGCACTTCGGAGCGGACCCTGCTCAAAGGTTTCACAGGCAGTGTGGCTGATCTTGCTTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CAA 72 bp TTCCAATCCTTGGAAGGCAGCCGTGGAGTAGGAATTTaGCTGCCAAAACCTCCTGAGGCAGAGGCAAGGCTG +
Preference number: 6 (lower is better)
Translates to: FQSLEGSRGVGI*LPKPPEAEARL
Trigger: CAGCCTTGCCTCTGCCTCAGGAGGTTTTGGCAGCAAAATTCCTACTCCACGGCTGCCTTCCAAGGATTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CAA 90 bp TGCTTTTCCTGCAGGTTAATGGGTGGCATGGTCCGTATACCAGGTTaGTTCGTTGAGTTACCATCACCTGAACTGAGCGGGTCGGGGACC +
Preference number: 6 (lower is better)
Translates to: CFSCRLMGGMVRIPG*FVELPSPELSGSGT
Trigger: GGTCCCCGACCCGCTCAGTTCAGGTGATGGTAACTCAACGAACAAACCTGGTATACGGACCATGCCACCCATTAACCTGCAGGAAAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CAA 90 bp ACAATAAAGCCTTGCTTGATTTGGCTGACATCCACAGGCCAGGTGTaGTGGCTGGAGCGAAGCATATCCAAGTCCCACACCTCAGCCCGA +
Preference number: 6 (lower is better)
Translates to: TIKPCLIWLTSTGQV*WLERSISKSHTSAR
Trigger: TCGGGCTGAGGTGTGGGACTTGGATATGCTTCGCTCCAGCCACAACACCTGGCCTGTGGATGTCAGCCAAATCAAGCAAGGCTTTATTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CAA 90 bp GAGGCAGTAGGTGTCATGAAAGCATCAGGTGTCATCAACTTGGGCTaGGTCTCACTGCTCAGACTGAGGAAGTCTGCAGGAGCAGGCAGT +
Preference number: 6 (lower is better)
Translates to: EAVGVMKASGVINLG*VSLLRLRKSAGAGS
Trigger: ACTGCCTGCTCCTGCAGACTTCCTCAGTCTGAGCAGTGAGACCAAGCCCAAGTTGATGACACCTGATGCTTTCATGACACCTACTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
ENSMUST00000145618.2
CDS CAA 90 bp TGCAGGGAGGCAGTAGGTGTCATGAAAGCATCAGGTGTCATCAACTaGGGCTTGGTCTCACTGCTCAGACTGAGGAAGTCTGCAGGAGCA +
Preference number: 6 (lower is better)
Translates to: CREAVGVMKASGVIN*GLVSLLRLRKSAGA
Trigger: TGCTCCTGCAGACTTCCTCAGTCTGAGCAGTGAGACCAAGCCCAAGTTGATGACACCTGATGCTTTCATGACACCTACTGCCTCCCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
ENSMUST00000145618.2
CDS TCA 72 bp TCACAGAACAGGAGGCAAGAAAGAGGCCTCCCATCATaGGGCTTCCATTCATGCAGACACCTTGGCTCATCC +
Preference number: 6 (lower is better)
Translates to: SQNRRQERGLPS*GFHSCRHLGSS
Trigger: GGATGAGCCAAGGTGTCTGCATGAATGGAAGCCTCATGATGGGAGGCCTCTTTCTTGCCTCCTGTTCTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS TCA 72 bp AAATCCAAGGACAGTGCAGAGGCAGCAGTGGATACCTaGCCAGGTCCCTTGGAAATCAACTTGTCAGCTGGG +
Preference number: 6 (lower is better)
Translates to: KSKDSAEAAVDT*PGPLEINLSAG
Trigger: CCCAGCTGACAAGTTGATTTCCAAGGGACCTGGTCAGGTATCCACTGCTGCCTCTGCACTGTCCTTGGATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
CDS CCA 72 bp AAAAAGATTGCCAGCCTCATCCAGGCAGGCGAGCTGTaGAGAGTTGAGGTGTGCAAAAGCAAGATCAGCCAC +
Preference number: 6 (lower is better)
Translates to: KKIASLIQAGEL*RVEVCKSKISH
Trigger: GTGGCTGATCTTGCTTTTGCACACCTCAACTCTCCACAGCTCGCCTGCCTGGATGAGGCTGGCAATCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CCA 72 bp CGACTGACAACCTGGATGCCAAAGCTCAGCACAGGGTaGGTGAGCAGGAACTCAGAGATAGAACTAAAGCAC +
Preference number: 6 (lower is better)
Translates to: RLTTWMPKLSTG*VSRNSEIELKH
Trigger: GTGCTTTAGTTCTATCTCTGAGTTCCTGCTCACCCACCCTGTGCTGAGCTTTGGCATCCAGGTTGTCAGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
ENSMUST00000145618.2
CDS CAA 72 bp GTCACTTTGCTCAGCACTTGTGTCCTGACTGTCACGTaGCTGCAGCAAGTGATAAGGTGGCCTGTGGAAAGC +
Preference number: 6 (lower is better)
Translates to: VTLLSTCVLTVT*LQQVIRWPVES
Trigger: GCTTTCCACAGGCCACCTTATCACTTGCTGCAGCAACGTGACAGTCAGGACACAAGTGCTGAGCAAAGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000136048.8
CDS CAA 90 bp TCACTTAGGCACGTGCTATGGCCTTTCACCACAATAAAGCCTTGCTaGATTTGGCTGACATCCACAGGCCAGGTGTTGTGGCTGGAGCGA +
Preference number: 6 (lower is better)
Translates to: SLRHVLWPFTTIKPC*IWLTSTGQVLWLER
Trigger: TCGCTCCAGCCACAACACCTGGCCTGTGGATGTCAGCCAAATCAAGCAAGGCTTTATTGTGGTGAAAGGCCATAGCACGTGCCTAAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CAA 90 bp AGACCTTCAAGCTGGGCACAGAGACGCTGTAGCAGTTCTTCTTGGTaGTGCCATAGCTCTGCCAGCTCTCTTTGCTGCTGCCAAATTAGT +
Preference number: 6 (lower is better)
Translates to: RPSSWAQRRCSSSSW*CHSSASSLCCCQIS
Trigger: ACTAATTTGGCAGCAGCAAAGAGAGCTGGCAGAGCTATGGCACAACCAAGAAGAACTGCTACAGCGTCTCTGTGCCCAGCTTGAAGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS TCA 72 bp GTCCAAACAAACTTTGAGGCTGGGAGGCACACTCACTaGGCTGAAGATATCTGGGGAGAAGCTTGGCTCATC +
Preference number: 6 (lower is better)
Translates to: VQTNFEAGRHTH*AEDIWGEAWLI
Trigger: GATGAGCCAAGCTTCTCCCCAGATATCTTCAGCTCAGTGAGTGTGCCTCCCAGCCTCAAAGTTTGTTTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136048.8
CDS GCA 72 bp AGGCACGTGCTATGGCCTTTCACCACAATAAAGCCTTaGTTGATTTGGCTGACATCCACAGGCCAGGTGTTG +
Preference number: 6 (lower is better)
Translates to: RHVLWPFTTIKP*LIWLTSTGQVL
Trigger: CAACACCTGGCCTGTGGATGTCAGCCAAATCAAGCAAGGCTTTATTGTGGTGAAAGGCCATAGCACGTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS GCA 72 bp ACCACATCAGGGTTCAGCTGTGGCTGGAAGCGGATCTaGACATCTTGTAGTGCCTTAGTGTGCACACAAAAG +
Preference number: 6 (lower is better)
Translates to: TTSGFSCGWKRI*TSCSALVCTQK
Trigger: CTTTTGTGTGCACACTAAGGCACTACAAGATGTGCAGATCCGCTTCCAGCCACAGCTGAACCCTGATGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
ENSMUST00000145618.2
CDS CCA 72 bp TCAGGGGAGAGGGCTCCTTCACTTAGGCACGTGCTATaGCCTTTCACCACAATAAAGCCTTGCTTGATTTGG +
Preference number: 6 (lower is better)
Translates to: SGERAPSLRHVL*PFTTIKPCLIW
Trigger: CCAAATCAAGCAAGGCTTTATTGTGGTGAAAGGCCATAGCACGTGCCTAAGTGAAGGAGCCCTCTCCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CCA 72 bp CTTCCTGCAAATCCAAGGACAGTGCAGAGGCAGCAGTaGATACCTGACCAGGTCCCTTGGAAATCAACTTGT +
Preference number: 6 (lower is better)
Translates to: LPANPRTVQRQQ*IPDQVPWKSTC
Trigger: ACAAGTTGATTTCCAAGGGACCTGGTCAGGTATCCACTGCTGCCTCTGCACTGTCCTTGGATTTGCAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
CDS CCA 72 bp GTCCTGACTGTCACGTTGCTGCAGCAAGTGATAAGGTaGCCTGTGGAAAGCCAGACTTTTGTGCTTTTCCTG +
Preference number: 6 (lower is better)
Translates to: VLTVTLLQQVIR*PVESQTFVLFL
Trigger: CAGGAAAAGCACAAAAGTCTGGCTTTCCACAGGCCACCTTATCACTTGCTGCAGCAACGTGACAGTCAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000136048.8
CDS CAA 72 bp TGCAGGTTAATGGGTGGCATGGTCCGTATACCAGGTTaGTTCGTTGAGTTACCATCACCTGAACTGAGCGGG +
Preference number: 6 (lower is better)
Translates to: CRLMGGMVRIPG*FVELPSPELSG
Trigger: CCCGCTCAGTTCAGGTGATGGTAACTCAACGAACAAACCTGGTATACGGACCATGCCACCCATTAACCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CAA 72 bp GCTATGGCCTTTCACCACAATAAAGCCTTGCTTGATTaGGCTGACATCCACAGGCCAGGTGTTGTGGCTGGA +
Preference number: 6 (lower is better)
Translates to: AMAFHHNKALLD*ADIHRPGVVAG
Trigger: TCCAGCCACAACACCTGGCCTGTGGATGTCAGCCAAATCAAGCAAGGCTTTATTGTGGTGAAAGGCCATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CAA 72 bp CACGTGCTATGGCCTTTCACCACAATAAAGCCTTGCTaGATTTGGCTGACATCCACAGGCCAGGTGTTGTGG +
Preference number: 6 (lower is better)
Translates to: HVLWPFTTIKPC*IWLTSTGQVLW
Trigger: CCACAACACCTGGCCTGTGGATGTCAGCCAAATCAAGCAAGGCTTTATTGTGGTGAAAGGCCATAGCACGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CAA 72 bp GGTGTCATGAAAGCATCAGGTGTCATCAACTTGGGCTaGGTCTCACTGCTCAGACTGAGGAAGTCTGCAGGA +
Preference number: 6 (lower is better)
Translates to: GVMKASGVINLG*VSLLRLRKSAG
Trigger: TCCTGCAGACTTCCTCAGTCTGAGCAGTGAGACCAAGCCCAAGTTGATGACACCTGATGCTTTCATGACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000132680.8
ENSMUST00000136048.8
ENSMUST00000145618.2
CDS CAA 72 bp GTCACTTTGCTCAGCACTTGTGTCCTGACTGTCACGTaGCTGCAGCAAGTGATAAGGTGGCCTTTCTGTCAG +
Preference number: 6 (lower is better)
Translates to: VTLLSTCVLTVT*LQQVIRWPFCQ
Trigger: CTGACAGAAAGGCCACCTTATCACTTGCTGCAGCAACGTGACAGTCAGGACACAAGTGCTGAGCAAAGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119261.8
CDS TCA 72 bp GTCCAAACAAACTTTGAGGCTGGGAGGCACACTCACTaGGCTGAAGATATCTGGGGAGAAGCGAATGGTTTG +
Preference number: 6 (lower is better)
Translates to: VQTNFEAGRHTH*AEDIWGEANGL
Trigger: CAAACCATTCGCTTCTCCCCAGATATCTTCAGCTCAGTGAGTGTGCCTCCCAGCCTCAAAGTTTGTTTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
CDS TCA 72 bp CCCATCATCCTTCTTGCTTTTTCTCTTGAGCTTAGGTaGCGTCCGAGGGGATCCCTTCGTCTTCCAATCCTT +
Preference number: 6 (lower is better)
Translates to: PIILLAFSLELR*RPRGSLRLPIL
Trigger: AAGGATTGGAAGACGAAGGGATCCCCTCGGACGTCACCTAAGCTCAAGAGAAAAAGCAAGAAGGATGATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CAA 90 bp TTGCTGGAAATGCTAGAATCACTGCTGGCCACAATTTCCACTTCCTaGGCTAAAATCCCAATGCAGGTGGAGCTGTCATCTCCAGAGAGG +
Preference number: 6 (lower is better)
Translates to: LLEMLESLLATISTS*AKIPMQVELSSPER
Trigger: CCTCTCTGGAGATGACAGCTCCACCTGCATTGGGATTTTAGCCAAGGAAGTGGAAATTGTGGCCAGCAGTGATTCTAGCATTTCCAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CAA 90 bp ATCATCATGGTCACTTTGCTCAGCACTTGTGTCCTGACTGTCACGTaGCTGCAGCAAGTGATAAGGTGGCCTGTGGAAAGCCAGACTTTT +
Preference number: 6 (lower is better)
Translates to: IIMVTLLSTCVLTVT*LQQVIRWPVESQTF
Trigger: AAAAGTCTGGCTTTCCACAGGCCACCTTATCACTTGCTGCAGCAACGTGACAGTCAGGACACAAGTGCTGAGCAAAGTGACCATGATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040254.16
ENSMUST00000136048.8
CDS CAA 90 bp ATCATCATGGTCACTTTGCTCAGCACTTGTGTCCTGACTGTCACGTaGCTGCAGCAAGTGATAAGGTGGCCTTTCTGTCAGTGTGCTACA +
Preference number: 6 (lower is better)
Translates to: IIMVTLLSTCVLTVT*LQQVIRWPFCQCAT
Trigger: TGTAGCACACTGACAGAAAGGCCACCTTATCACTTGCTGCAGCAACGTGACAGTCAGGACACAAGTGCTGAGCAAAGTGACCATGATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119261.8
CDS GCA 72 bp TTGAGGTCACTTCTAGTTCCAAGGTCAGATGCTAGCTaGTGGATTAGGGAAAGGAGAACAGGCTGGGATAGT +
Preference number: 6 (lower is better)
Translates to: LRSLLVPRSDAS*WIRERRTGWDS
Trigger: ACTATCCCAGCCTGTTCTCCTTTCCCTAATCCAGCAGCTAGCATCTGACCTTGGAACTAGAAGTGACCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CCA 72 bp TTGACCTGCAACAGGCTCCAGACTTCTGGAGACACATaGAGGAACCGTTTTCTTGATTTCATCCCTTACGCT +
Preference number: 6 (lower is better)
Translates to: LTCNRLQTSGDT*RNRFLDFIPYA
Trigger: AGCGTAAGGGATGAAATCAAGAAAACGGTTCCTCCATGTGTCTCCAGAAGTCTGGAGCCTGTTGCAGGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CAA 90 bp ACATCACTAAGAATCAAATACTCTGCTGAGAGGTCCAAACAAACTTaGAGGCTGGGAGGCACACTCACTGAGCTGAAGATATCTGGGGAG +
Preference number: 6 (lower is better)
Translates to: TSLRIKYSAERSKQT*RLGGTLTELKISGE
Trigger: CTCCCCAGATATCTTCAGCTCAGTGAGTGTGCCTCCCAGCCTCAAAGTTTGTTTGGACCTCTCAGCAGAGTATTTGATTCTTAGTGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CCA 72 bp AGCCTAAAGCTGTCATTGATTTGCTGGAACATAGCCTaGCAACTCTTCTCAAAAGCTGGCAGTACCACACTC +
Preference number: 6 (lower is better)
Translates to: SLKLSLICWNIA*QLFSKAGSTTL
Trigger: GAGTGTGGTACTGCCAGCTTTTGAGAAGAGTTGCCAGGCTATGTTCCAGCAAATCAATGACAGCTTTAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CAA 72 bp ATGCTAGAATCACTGCTGGCCACAATTTCCACTTCCTaGGCTAAAATCCCAATGCAGGTGGAGCTGTCATCT +
Preference number: 6 (lower is better)
Translates to: MLESLLATISTS*AKIPMQVELSS
Trigger: AGATGACAGCTCCACCTGCATTGGGATTTTAGCCAAGGAAGTGGAAATTGTGGCCAGCAGTGATTCTAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS TCA 72 bp CTTTCGTTGCACATCACTAAGAATCAAATACTCTGCTaGGAGGTCCAAACAAACTTTGAGGCTGGGAGGCAC +
Preference number: 6 (lower is better)
Translates to: LSLHITKNQILC*EVQTNFEAGRH
Trigger: GTGCCTCCCAGCCTCAAAGTTTGTTTGGACCTCTCAGCAGAGTATTTGATTCTTAGTGATGTGCAACGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CAA 72 bp AGAATCAAATACTCTGCTGAGAGGTCCAAACAAACTTaGAGGCTGGGAGGCACACTCACTGAGCTGAAGATA +
Preference number: 6 (lower is better)
Translates to: RIKYSAERSKQT*RLGGTLTELKI
Trigger: TATCTTCAGCTCAGTGAGTGTGCCTCCCAGCCTCAAAGTTTGTTTGGACCTCTCAGCAGAGTATTTGATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8
CDS CAA 72 bp TGCAAATATTCCTGTGTGCCCAGCCTAAAGCTGTCATaGATTTGCTGGAACATAGCCTGGCAACTCTTCTCA +
Preference number: 6 (lower is better)
Translates to: CKYSCVPSLKLS*ICWNIAWQLFS
Trigger: TGAGAAGAGTTGCCAGGCTATGTTCCAGCAAATCAATGACAGCTTTAGGCTGGGCACACAGGAATATTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040254.16
ENSMUST00000119261.8
ENSMUST00000136048.8