RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EDARADD (Mus musculus)

Ensembl gene IDs: ENSMUSG00000095105

Ensembl transcript IDs: ENSMUST00000179308.3

Found 251 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCCAGCTTGCTCTGGGATCGCCGCCACCTCTGCCTTCTGAGTGCTaGGATCACAGGTGGGCTACCACAGCCTCCCCTCACTTATGTGGG +
Preference number: 1 (lower is better)
Translates to: SQLALGSPPPLPSEC*DHRWATTASPHLCG
Trigger: CCCACATAAGTGAGGGGAGGCTGTGGTAGCCCACCTGTGATCCCAGCACTCAGAAGGCAGAGGTGGCGGCGATCCCAGAGCAAGCTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR GCA 90 bp GCTAGCCAGCTTGCTCTGGGATCGCCGCCACCTCTGCCTTCTGAGTaGTGGGATCACAGGTGGGCTACCACAGCCTCCCCTCACTTATGT +
Preference number: 1 (lower is better)
Translates to: ASQLALGSPPPLPSE*WDHRWATTASPHLC
Trigger: ACATAAGTGAGGGGAGGCTGTGGTAGCCCACCTGTGATCCCAGCACTCAGAAGGCAGAGGTGGCGGCGATCCCAGAGCAAGCTGGCTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR GCA 90 bp CGTCTAGGGGCTAGGGAGACGGGCTCTGCCGTTGGGTGCACTAGCTaGTCTTGCAGATGTGTTCCCAGCACCCACATGGAGATTGATGGA +
Preference number: 1 (lower is better)
Translates to: RLGARETGSAVGCTS*SCRCVPSTHMEIDG
Trigger: TCCATCAATCTCCATGTGGGTGCTGGGAACACATCTGCAAGAGCAGCTAGTGCACCCAACGGCAGAGCCCGTCTCCCTAGCCCCTAGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 90 bp GATCACAGGTGGGCTACCACAGCCTCCCCTCACTTATGTGGGTTCTaGGGACCCAGACTCTGGTCCCATGCTTTATGTGGAGGGCACCGT +
Preference number: 1 (lower is better)
Translates to: DHRWATTASPHLCGF*GPRLWSHALCGGHR
Trigger: ACGGTGCCCTCCACATAAAGCATGGGACCAGAGTCTGGGTCCCCAGAACCCACATAAGTGAGGGGAGGCTGTGGTAGCCCACCTGTGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 90 bp GTGCTGGGATCACAGGTGGGCTACCACAGCCTCCCCTCACTTATGTaGGTTCTGGGGACCCAGACTCTGGTCCCATGCTTTATGTGGAGG +
Preference number: 1 (lower is better)
Translates to: VLGSQVGYHSLPSLM*VLGTQTLVPCFMWR
Trigger: CCTCCACATAAAGCATGGGACCAGAGTCTGGGTCCCCAGAACCCACATAAGTGAGGGGAGGCTGTGGTAGCCCACCTGTGATCCCAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR GCA 90 bp AAATATCTGCGTCTAGGGGCTAGGGAGACGGGCTCTGCCGTTGGGTaGACTAGCTGCTCTTGCAGATGTGTTCCCAGCACCCACATGGAG +
Preference number: 1 (lower is better)
Translates to: KYLRLGARETGSAVG*TSCSCRCVPSTHME
Trigger: CTCCATGTGGGTGCTGGGAACACATCTGCAAGAGCAGCTAGTGCACCCAACGGCAGAGCCCGTCTCCCTAGCCCCTAGACGCAGATATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 90 bp AGACAGGATCTCTCATCAGCTTGTAGCTCAGCACATAGGCTAGGCTaGCTGGCAGAGGAGCCCCAGGGATCCACCTGTCTCCTAGCCAGA +
Preference number: 1 (lower is better)
Translates to: RQDLSSACSSAHRLG*LAEEPQGSTCLLAR
Trigger: TCTGGCTAGGAGACAGGTGGATCCCTGGGGCTCCTCTGCCAGCCAGCCTAGCCTATGTGCTGAGCTACAAGCTGATGAGAGATCCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 90 bp ACCTTGCTCCCCAGTACTGGAGTTACAGGCACATGCTGCCACGTCTaGCTATTATGTGTGCGCTCATTGGCCCATGTCCTCAGCCTTCCC +
Preference number: 1 (lower is better)
Translates to: TLLPSTGVTGTCCHV*LLCVRSLAHVLSLP
Trigger: GGGAAGGCTGAGGACATGGGCCAATGAGCGCACACATAATAGCCAGACGTGGCAGCATGTGCCTGTAACTCCAGTACTGGGGAGCAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 90 bp TGGTGGCCCAGCACTTGGAAGGCAGAAGCAGGCGATCGGAAATTCTaGGCCATCCTCTGCTACAGAATGAGAGTGAGAGCACCTTGGGCT +
Preference number: 1 (lower is better)
Translates to: WWPSTWKAEAGDRKF*AILCYRMRVRAPWA
Trigger: AGCCCAAGGTGCTCTCACTCTCATTCTGTAGCAGAGGATGGCCCAGAATTTCCGATCGCCTGCTTCTGCCTTCCAAGTGCTGGGCCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 90 bp CCCCTTCCTTGTGCATCTATAACCAAGGGCCCAGGAGTCCCAGGGTaGGGTCTGAGTCCCAGGCAGGCGACAAAACTGCAAATATCTCTC +
Preference number: 1 (lower is better)
Translates to: PLPCASITKGPGVPG*GLSPRQATKLQISL
Trigger: GAGAGATATTTGCAGTTTTGTCGCCTGCCTGGGACTCAGACCCCACCCTGGGACTCCTGGGCCCTTGGTTATAGATGCACAAGGAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR TCA 90 bp CCAAAGCCCCTCTCGTTTCCCTACAGTCGCCTCTGCTCTAAGAAGTaGGAGCTAAACCACGTGTGGTGGCCCAGCACTTGGAAGGCAGAA +
Preference number: 1 (lower is better)
Translates to: PKPLSFPYSRLCSKK*ELNHVWWPSTWKAE
Trigger: TTCTGCCTTCCAAGTGCTGGGCCACCACACGTGGTTTAGCTCTCACTTCTTAGAGCAGAGGCGACTGTAGGGAAACGAGAGGGGCTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR TCA 90 bp CCTGAGCCTTTTTCAACAGAAACAGTGACAGTGAACCGGCCGGGATaGCTTCTCCCTGCCATCCTCTGGCCAGGACTGCAGAGATTCTGT +
Preference number: 1 (lower is better)
Translates to: PEPFSTETVTVNRPG*LLPAILWPGLQRFC
Trigger: ACAGAATCTCTGCAGTCCTGGCCAGAGGATGGCAGGGAGAAGTCATCCCGGCCGGTTCACTGTCACTGTTTCTGTTGAAAAAGGCTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR GCA 90 bp CTGCAAATATCTCTCAGTGTGCTTCCGGAGGTGTGTGCCTCTCTCTaGCTTTGGTTTTGTAGCACCCGGGGCAGAGTGGTTTGGCATTGC +
Preference number: 1 (lower is better)
Translates to: LQISLSVLPEVCASL*LWFCSTRGRVVWHC
Trigger: GCAATGCCAAACCACTCTGCCCCGGGTGCTACAAAACCAAAGGCAGAGAGAGGCACACACCTCCGGAAGCACACTGAGAGATATTTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 90 bp AGACAGGGTCTCTCCCTGAACAAAAACCTTGCCAATTTGGCTATCTaGCTGGCCAGGGAGTTCCTGGACCTTGCTCCCCAGTACTGGAGT +
Preference number: 1 (lower is better)
Translates to: RQGLSLNKNLANLAI*LAREFLDLAPQYWS
Trigger: ACTCCAGTACTGGGGAGCAAGGTCCAGGAACTCCCTGGCCAGCCAGATAGCCAAATTGGCAAGGTTTTTGTTCAGGGAGAGACCCTGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR GCA 90 bp CATTGTTGTTTCTGTGTGTACACGTGGCAACACGAAGCAGATGTTTaGTGCCAGCTCAGAGAGGGGAATACTGTTGGCCGGGGGAGGAAG +
Preference number: 1 (lower is better)
Translates to: HCCFCVYTWQHEADV*CQLREGNTVGRGRK
Trigger: CTTCCTCCCCCGGCCAACAGTATTCCCCTCTCTGAGCTGGCAGCAAACATCTGCTTCGTGTTGCCACGTGTACACACAGAAACAACAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 90 bp CAGAGAAAACATACCCTTTCTCTTTCTGTCTTAGTGGGGCCTCCTTaGAAGGCGCCTAACCAAGCCAGACTCTGTATCCTCCAGCAGGGG +
Preference number: 1 (lower is better)
Translates to: QRKHTLSLSVLVGPP*KAPNQARLCILQQG
Trigger: CCCCTGCTGGAGGATACAGAGTCTGGCTTGGTTAGGCGCCTTCCAAGGAGGCCCCACTAAGACAGAAAGAGAAAGGGTATGTTTTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 90 bp ACACGAAGCAGATGTTTGCTGCCAGCTCAGAGAGGGGAATACTGTTaGCCGGGGGAGGAAGACGATTTGAGATATGCATACAGCTCGCTC +
Preference number: 1 (lower is better)
Translates to: TRSRCLLPAQRGEYC*PGEEDDLRYAYSSL
Trigger: GAGCGAGCTGTATGCATATCTCAAATCGTCTTCCTCCCCCGGCCAACAGTATTCCCCTCTCTGAGCTGGCAGCAAACATCTGCTTCGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 90 bp ATATCTCTCAGTGTGCTTCCGGAGGTGTGTGCCTCTCTCTGCCTTTaGTTTTGTAGCACCCGGGGCAGAGTGGTTTGGCATTGCTACATC +
Preference number: 1 (lower is better)
Translates to: ISLSVLPEVCASLCL*FCSTRGRVVWHCYI
Trigger: GATGTAGCAATGCCAAACCACTCTGCCCCGGGTGCTACAAAACCAAAGGCAGAGAGAGGCACACACCTCCGGAAGCACACTGAGAGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR GCA 90 bp GTACTGGAGTTACAGGCACATGCTGCCACGTCTGGCTATTATGTGTaGGCTCATTGGCCCATGTCCTCAGCCTTCCCAAAGGGCATTTTA +
Preference number: 1 (lower is better)
Translates to: VLELQAHAATSGYYV*AHWPMSSAFPKGIL
Trigger: TAAAATGCCCTTTGGGAAGGCTGAGGACATGGGCCAATGAGCGCACACATAATAGCCAGACGTGGCAGCATGTGCCTGTAACTCCAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR GCA 90 bp TCCCAGAGGGATGCTGCAGAGGACAGACTGGACGGTCACACAAAATaGAACATCCTCTTCCATGTCCAAGAGATCTGGGCAGTTCCATCA +
Preference number: 1 (lower is better)
Translates to: SQRDAAEDRLDGHTK*NILFHVQEIWAVPS
Trigger: TGATGGAACTGCCCAGATCTCTTGGACATGGAAGAGGATGTTGCATTTTGTGTGACCGTCCAGTCTGTCCTCTGCAGCATCCCTCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR GCA 90 bp CTTTGCCTTCGCAGGCTGAAATGTCTGCGTAAGTTCCCAGAGGGATaGTGCAGAGGACAGACTGGACGGTCACACAAAATGCAACATCCT +
Preference number: 1 (lower is better)
Translates to: LCLRRLKCLRKFPEG*CRGQTGRSHKMQHP
Trigger: AGGATGTTGCATTTTGTGTGACCGTCCAGTCTGTCCTCTGCAGCATCCCTCTGGGAACTTACGCAGACATTTCAGCCTGCGAAGGCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTAAGTGTATGCCATGTATGTACGAGTaGCCTTGGAGACTAGAAGAGGGTGTCGGATCCCCAGGAGCTAGT +
Preference number: 1 (lower is better)
Translates to: CVCVCVCKCMPCMYE*PWRLEEGVGSPGAS
Trigger: ACTAGCTCCTGGGGATCCGACACCCTCTTCTAGTCTCCAAGGGCACTCGTACATACATGGCATACACTTACACACACACACACACACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR GCA 90 bp CTCTGCCTTTGGTTTTGTAGCACCCGGGGCAGAGTGGTTTGGCATTaGTACATCGATGGCATTGTTGTTTCTGTGTGTACACGTGGCAAC +
Preference number: 1 (lower is better)
Translates to: LCLWFCSTRGRVVWH*YIDGIVVSVCTRGN
Trigger: GTTGCCACGTGTACACACAGAAACAACAATGCCATCGATGTAGCAATGCCAAACCACTCTGCCCCGGGTGCTACAAAACCAAAGGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 90 bp TGTGTGTGTGTGTGTAAGTGTATGCCATGTATGTACGAGTGCCCTTaGAGACTAGAAGAGGGTGTCGGATCCCCAGGAGCTAGTCATGAC +
Preference number: 1 (lower is better)
Translates to: CVCVCKCMPCMYECP*RLEEGVGSPGASHD
Trigger: GTCATGACTAGCTCCTGGGGATCCGACACCCTCTTCTAGTCTCCAAGGGCACTCGTACATACATGGCATACACTTACACACACACACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 90 bp TACTTCTACCCCCGAGTGCTGGAAGTGGGACGTGTATCATCACAGTaGTTTATGCAATGCTGGGGACCAAACTTTGGCTCACTAGGCAAG +
Preference number: 1 (lower is better)
Translates to: YFYPRVLEVGRVSSQ*FMQCWGPNFGSLGK
Trigger: CTTGCCTAGTGAGCCAAAGTTTGGTCCCCAGCATTGCATAAACCACTGTGATGATACACGTCCCACTTCCAGCACTCGGGGGTAGAAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 90 bp GCCTCTCTCTGCCTTTGGTTTTGTAGCACCCGGGGCAGAGTGGTTTaGCATTGCTACATCGATGGCATTGTTGTTTCTGTGTGTACACGT +
Preference number: 1 (lower is better)
Translates to: ASLCLWFCSTRGRVV*HCYIDGIVVSVCTR
Trigger: ACGTGTACACACAGAAACAACAATGCCATCGATGTAGCAATGCCAAACCACTCTGCCCCGGGTGCTACAAAACCAAAGGCAGAGAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 90 bp AAGGAAGCACACCCTGTTCCACCAAGGTCCTTCAAGTCTAGGTCTTaGGAACCCACTGGTGCTCCATCCACTGATGCTGAGACTTCAATA +
Preference number: 1 (lower is better)
Translates to: KEAHPVPPRSFKSRS*EPTGAPSTDAETSI
Trigger: TATTGAAGTCTCAGCATCAGTGGATGGAGCACCAGTGGGTTCCCAAGACCTAGACTTGAAGGACCTTGGTGGAACAGGGTGTGCTTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR GCA 90 bp ACACTTACAAGCACAGCTGTGTTCTGGAGCTGCATCCTGACCAGTTaGGTAGAGGCTGAAGTACTGGCAACACTTCCTGTGAAACACTTC +
Preference number: 1 (lower is better)
Translates to: TLTSTAVFWSCILTS*VEAEVLATLPVKHF
Trigger: GAAGTGTTTCACAGGAAGTGTTGCCAGTACTTCAGCCTCTACGCAACTGGTCAGGATGCAGCTCCAGAACACAGCTGTGCTTGTAAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR GCA 90 bp CGAGTGCTGGAAGTGGGACGTGTATCATCACAGTGGTTTATGCAATaGTGGGGACCAAACTTTGGCTCACTAGGCAAGGACTCTAACAAC +
Preference number: 1 (lower is better)
Translates to: RVLEVGRVSSQWFMQ*WGPNFGSLGKDSNN
Trigger: GTTGTTAGAGTCCTTGCCTAGTGAGCCAAAGTTTGGTCCCCAGCATTGCATAAACCACTGTGATGATACACGTCCCACTTCCAGCACTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 90 bp GGTGTCATTTTCTTTCCATGTTGGCATGTCTCTGTCCACAGGCTTTaGCCCTGTGTGACCTACCAAATATTCTTCCCCAATCCCAGGCTC +
Preference number: 1 (lower is better)
Translates to: GVIFFPCWHVSVHRL*PCVTYQIFFPNPRL
Trigger: GAGCCTGGGATTGGGGAAGAATATTTGGTAGGTCACACAGGGCCAAAGCCTGTGGACAGAGACATGCCAACATGGAAAGAAAATGACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 90 bp TTACAGGCACATGCTGCCACGTCTGGCTATTATGTGTGCGCTCATTaGCCCATGTCCTCAGCCTTCCCAAAGGGCATTTTAAAAGATGTG +
Preference number: 1 (lower is better)
Translates to: LQAHAATSGYYVCAH*PMSSAFPKGILKDV
Trigger: CACATCTTTTAAAATGCCCTTTGGGAAGGCTGAGGACATGGGCCAATGAGCGCACACATAATAGCCAGACGTGGCAGCATGTGCCTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR TCA 90 bp AACAGTGAACCAGAACTGATGGGCAAGTCTCACTGTAGACGTTGTTaGTTGGAGTTCACGCTGTGTGGGAAGCTGGCTTTACCTACCAAC +
Preference number: 1 (lower is better)
Translates to: NSEPELMGKSHCRRC*LEFTLCGKLALPTN
Trigger: GTTGGTAGGTAAAGCCAGCTTCCCACACAGCGTGAACTCCAATCAACAACGTCTACAGTGAGACTTGCCCATCAGTTCTGGTTCACTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 90 bp TTGGCATTGCTACATCGATGGCATTGTTGTTTCTGTGTGTACACGTaGCAACACGAAGCAGATGTTTGCTGCCAGCTCAGAGAGGGGAAT +
Preference number: 1 (lower is better)
Translates to: LALLHRWHCCFCVYT*QHEADVCCQLREGN
Trigger: ATTCCCCTCTCTGAGCTGGCAGCAAACATCTGCTTCGTGTTGCCACGTGTACACACAGAAACAACAATGCCATCGATGTAGCAATGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR TCA 90 bp ATTTCCCAATGCTCCATCATTCCTCTATCTCTGAGCCTCACCTTCTaGGTTCCTTCCTGCAAAGTGATTTCCAAAGCCCCTCTCGTTTCC +
Preference number: 1 (lower is better)
Translates to: ISQCSIIPLSLSLTF*VPSCKVISKAPLVS
Trigger: GGAAACGAGAGGGGCTTTGGAAATCACTTTGCAGGAAGGAACTCAGAAGGTGAGGCTCAGAGATAGAGGAATGATGGAGCATTGGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR TCA 90 bp TCACGGAGCAGCACACATGGCTTGCATGACATTCTGTTTTCTTTTTaGAGCAGGGTCTCATATATGGAAGGCTGGCCTCAAACTCACGTT +
Preference number: 1 (lower is better)
Translates to: SRSSTHGLHDILFSF*SRVSYMEGWPQTHV
Trigger: AACGTGAGTTTGAGGCCAGCCTTCCATATATGAGACCCTGCTTCAAAAAGAAAACAGAATGTCATGCAAGCCATGTGTGCTGCTCCGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 90 bp TATACATTCTTCCTTTCTGTTTACTTTAATTGGTGCACATGTACATaGGCCTGCGAGCTTGCGTGCACATGTGCATGGGGAAGCCAGAGA +
Preference number: 1 (lower is better)
Translates to: YTFFLSVYFNWCTCT*ACELACTCAWGSQR
Trigger: TCTCTGGCTTCCCCATGCACATGTGCACGCAAGCTCGCAGGCCCATGTACATGTGCACCAATTAAAGTAAACAGAAAGGAAGAATGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR TCA 90 bp TCTTTCCATGTTGGCATGTCTCTGTCCACAGGCTTTGGCCCTGTGTaGCCTACCAAATATTCTTCCCCAATCCCAGGCTCAAATATTAAA +
Preference number: 1 (lower is better)
Translates to: SFHVGMSLSTGFGPV*PTKYSSPIPGSNIK
Trigger: TTTAATATTTGAGCCTGGGATTGGGGAAGAATATTTGGTAGGTCACACAGGGCCAAAGCCTGTGGACAGAGACATGCCAACATGGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR GCA 90 bp CTATACAGCCAGTATACATTCTTCCTTTCTGTTTACTTTAATTGGTaGACATGTACATGGGCCTGCGAGCTTGCGTGCACATGTGCATGG +
Preference number: 1 (lower is better)
Translates to: LYSQYTFFLSVYFNW*TCTWACELACTCAW
Trigger: CCATGCACATGTGCACGCAAGCTCGCAGGCCCATGTACATGTGCACCAATTAAAGTAAACAGAAAGGAAGAATGTATACTGGCTGTATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR GCA 90 bp ACATCCTGGAGACATGAGCCTCCATCACTGTATAGTGCCTTCGTCTaGCAAGTCACAGAGAAAACATACCCTTTCTCTTTCTGTCTTAGT +
Preference number: 1 (lower is better)
Translates to: TSWRHEPPSLYSAFV*QVTEKTYPFSFCLS
Trigger: ACTAAGACAGAAAGAGAAAGGGTATGTTTTCTCTGTGACTTGGCAGACGAAGGCACTATACAGTGATGGAGGCTCATGTCTCCAGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 90 bp CAATCTTTGGCAGTATTTAAAGAGGGTGTCATTTTCTTTCCATGTTaGCATGTCTCTGTCCACAGGCTTTGGCCCTGTGTGACCTACCAA +
Preference number: 1 (lower is better)
Translates to: QSLAVFKEGVIFFPC*HVSVHRLWPCVTYQ
Trigger: TTGGTAGGTCACACAGGGCCAAAGCCTGTGGACAGAGACATGCCAACATGGAAAGAAAATGACACCCTCTTTAAATACTGCCAAAGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR GCA 90 bp CTGTATGCGGACATGTCCAAAGACATTGATATTTTGGGATCCCGCTaGAATCTTTGGCAGTATTTAAAGAGGGTGTCATTTTCTTTCCAT +
Preference number: 1 (lower is better)
Translates to: LYADMSKDIDILGSR*NLWQYLKRVSFSFH
Trigger: ATGGAAAGAAAATGACACCCTCTTTAAATACTGCCAAAGATTGCAGCGGGATCCCAAAATATCAATGTCTTTGGACATGTCCGCATACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 90 bp GACATGTCCAAAGACATTGATATTTTGGGATCCCGCTGCAATCTTTaGCAGTATTTAAAGAGGGTGTCATTTTCTTTCCATGTTGGCATG +
Preference number: 1 (lower is better)
Translates to: DMSKDIDILGSRCNL*QYLKRVSFSFHVGM
Trigger: CATGCCAACATGGAAAGAAAATGACACCCTCTTTAAATACTGCCAAAGATTGCAGCGGGATCCCAAAATATCAATGTCTTTGGACATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 90 bp CTACCTTTCAATAAGCTGGTTTGTACTGTAGCTGAGAATAATCCTTaGCTTTCTTTGTACAACACAGATCCAAGTCATCTTACACTTATA +
Preference number: 1 (lower is better)
Translates to: LPFNKLVCTVAENNP*LSLYNTDPSHLTLI
Trigger: TATAAGTGTAAGATGACTTGGATCTGTGTTGTACAAAGAAAGCCAAGGATTATTCTCAGCTACAGTACAAACCAGCTTATTGAAAGGTAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR TCA 90 bp GTAAGTTCCCAGAGGGATGCTGCAGAGGACAGACTGGACGGTCACACAAAATGCGCCACCTCTGCCTTCTaGGTGCTGGGATCACAGGTG +
Preference number: 2 (lower is better)
Translates to: VSSQRDAAEDRLDGHTKCATSAF*VLGSQV
Trigger: CACCTGTGATCCCAGCACTCAGAAGGCAGAGGTGGC...GCATTTTGTGTGACCGTCCAGTCTGTCCTCTGCAGCATCCCTCTGGGAACTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR GCA 90 bp TCCACTGATGCTGAGACTTCAATAGCCCCAGCACTCGGCCCAGCATCTTGGCTTGGGATGACTTCTCCCTaGCATCCTCTGGCCAGGACT +
Preference number: 2 (lower is better)
Translates to: STDAETSIAPALGPASWLGMTSP*HPLART
Trigger: AGTCCTGGCCAGAGGATGGCAGGGAGAAGTCATCCC...AAGCCAAGATGCTGGGCCGAGTGCTGGGGCTATTGAAGTCTCAGCATCAGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CCA 90 bp GCTGCATCCCAGCATCCTTGGGTGCTTAACTGGGAGAGGAAGAGACCCAAGAGACTCCCTGCCATCCTCTaGCCAGGACTGCAGAGATTC +
Preference number: 2 (lower is better)
Translates to: AASQHPWVLNWERKRPKRLPAIL*PGLQRF
Trigger: GAATCTCTGCAGTCCTGGCCAGAGGATGGCAGGGAG...TCTCTTGGGTCTCTTCCTCTCCCAGTTAAGCACCCAAGGATGCTGGGATGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CCA 90 bp GCTGCATCCCAGCATCCTTGGGTGCTTAACTGGGAGAGGAAGAGACCCAAGAGACGCTGTGTGGGAAGCTaGCTTTACCTACCAACCGCC +
Preference number: 2 (lower is better)
Translates to: AASQHPWVLNWERKRPKRRCVGS*LYLPTA
Trigger: GGCGGTTGGTAGGTAAAGCCAGCTTCCCACACAGCG...TCTCTTGGGTCTCTTCCTCTCCCAGTTAAGCACCCAAGGATGCTGGGATGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CCA 90 bp CGGAAGGTGAATTCAGTGAACACTTACAAGCACAGCTGTGTTCTGGAGCTGCATCTAGCCAGCTTGCTCTaGGATCGCCGCCACCTCTGC +
Preference number: 2 (lower is better)
Translates to: RKVNSVNTYKHSCVLELHLASLL*DRRHLC
Trigger: GCAGAGGTGGCGGCGATCCCAGAGCAAGCTGGCTAG...ATGCAGCTCCAGAACACAGCTGTGCTTGTAAGTGTTCACTGAATTCACCTTCCG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CCA 90 bp TCCACTGATGCTGAGACTTCAATAGCCCCAGCACTCGGCCCAGCATCTTGGCTTGGAGTTCACGCTGTGTaGGAAGCTGGCTTTACCTAC +
Preference number: 2 (lower is better)
Translates to: STDAETSIAPALGPASWLGVHAV*EAGFTY
Trigger: GTAGGTAAAGCCAGCTTCCCACACAGCGTGAACTCC...AAGCCAAGATGCTGGGCCGAGTGCTGGGGCTATTGAAGTCTCAGCATCAGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CAA 90 bp GCATTGTTGTTTCTGTGTGTACACGTGGCAACACGAAGCAGATGTTaGCTGCCAGCTCAGAGAGGGGAATACTGTTGGCCGGGGGAGGAA +
Preference number: 2 (lower is better)
Translates to: ALLFLCVHVATRSRC*LPAQRGEYCWPGEE
Trigger: TTCCTCCCCCGGCCAACAGTATTCCCCTCTCTGAGCTGGCAGCAAACATCTGCTTCGTGTTGCCACGTGTACACACAGAAACAACAATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CCA 90 bp GTAAGTTCCCAGAGGGATGCTGCAGAGGACAGACTGGACGGTCACACAAAATGCGCGTGCACATGTGCATaGGGAAGCCAGAGAACAACT +
Preference number: 2 (lower is better)
Translates to: VSSQRDAAEDRLDGHTKCACTCA*GSQRTT
Trigger: AGTTGTTCTCTGGCTTCCCCATGCACATGTGCACGC...GCATTTTGTGTGACCGTCCAGTCTGTCCTCTGCAGCATCCCTCTGGGAACTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CCA 90 bp GGACGGTCACACAAAATGCAACATCCTCTTCCATGTCCAAGAGATCTGGGCAGTGCCTCTCTCTGCCTTTaGTTTTGTAGCACCCGGGGC +
Preference number: 2 (lower is better)
Translates to: GRSHKMQHPLPCPRDLGSASLCL*FCSTRG
Trigger: GCCCCGGGTGCTACAAAACCAAAGGCAGAGAGAGGC...ACTGCCCAGATCTCTTGGACATGGAAGAGGATGTTGCATTTTGTGTGACCGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CAA 90 bp AACACGAAGCAGATGTTTGCTGCCAGCTCAGAGAGGGGAATACTGTaGGCCGGGGGAGGAAGACGATTTGAGATATGCATACAGCTCGCT +
Preference number: 2 (lower is better)
Translates to: NTKQMFAASSERGIL*AGGGRRFEICIQLA
Trigger: AGCGAGCTGTATGCATATCTCAAATCGTCTTCCTCCCCCGGCCAACAGTATTCCCCTCTCTGAGCTGGCAGCAAACATCTGCTTCGTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR GCA 90 bp CCTCCATCACTGTATAGTGCCTTCGTCTGCCAAGTCACAGAGAAAACATACCCTCCTCTGCCTTCTGAGTaGTGGGATCACAGGTGGGCT +
Preference number: 2 (lower is better)
Translates to: PPSLYSAFVCQVTEKTYPPLPSE*WDHRWA
Trigger: AGCCCACCTGTGATCCCAGCACTCAGAAGGCAGAGG...AGGGTATGTTTTCTCTGTGACTTGGCAGACGAAGGCACTATACAGTGATGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR GCA 90 bp GCTGCATCCCAGCATCCTTGGGTGCTTAACTGGGAGAGGAAGAGACCCAAGAGAGTTACAGGCACATGCTaGCACGTCTGGCTATTATGT +
Preference number: 2 (lower is better)
Translates to: AASQHPWVLNWERKRPKRVTGTC*HVWLLC
Trigger: ACATAATAGCCAGACGTGGCAGCATGTGCCTGTAAC...TCTCTTGGGTCTCTTCCTCTCCCAGTTAAGCACCCAAGGATGCTGGGATGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR GCA 90 bp TGCCTTTGGTTTTGTAGCACCCGGGGCAGAGTGGTTTGGCATTGCTACATCGATCGCTCACAAGGTAAATaGTGGGGTGACAGTCACGGA +
Preference number: 2 (lower is better)
Translates to: CLWFCSTRGRVVWHCYIDRSQGK*WGDSHG
Trigger: TCCGTGACTGTCACCCCAGCATTTACCTTGTGAGCG...ATCGATGTAGCAATGCCAAACCACTCTGCCCCGGGTGCTACAAAACCAAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CCA 90 bp GTGTGTGTGTGTGTGTGTAAGTGTATGCCATGTATGTACGAGTGCCCTTGGAGACACTTATGTGGGTTCTaGGGACCCAGACTCTGGTCC +
Preference number: 2 (lower is better)
Translates to: VCVCVCKCMPCMYECPWRHLCGF*GPRLWS
Trigger: GGACCAGAGTCTGGGTCCCCAGAACCCACATAAGTG...TCTCCAAGGGCACTCGTACATACATGGCATACACTTACACACACACACACACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CCA 90 bp CCTCCATCACTGTATAGTGCCTTCGTCTGCCAAGTCACAGAGAAAACATACCCTCTCCCCTCACTTATGTaGGTTCTGGGGACCCAGACT +
Preference number: 2 (lower is better)
Translates to: PPSLYSAFVCQVTEKTYPLPSLM*VLGTQT
Trigger: AGTCTGGGTCCCCAGAACCCACATAAGTGAGGGGAG...AGGGTATGTTTTCTCTGTGACTTGGCAGACGAAGGCACTATACAGTGATGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CCA 90 bp TCCACTGATGCTGAGACTTCAATAGCCCCAGCACTCGGCCCAGCATCTTGGCTTTGGTTTATGCAATGCTaGGGACCAAACTTTGGCTCA +
Preference number: 2 (lower is better)
Translates to: STDAETSIAPALGPASWLWFMQC*GPNFGS
Trigger: TGAGCCAAAGTTTGGTCCCCAGCATTGCATAAACCA...AAGCCAAGATGCTGGGCCGAGTGCTGGGGCTATTGAAGTCTCAGCATCAGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CAA 90 bp GGGTGTCATTTTCTTTCCATGTTGGCATGTCTCTGTCCACAGGCTTaGGCCCTGTGTGACCTACCAAATATTCTTCCCCAATCCCAGGCT +
Preference number: 2 (lower is better)
Translates to: GCHFLSMLACLCPQA*ALCDLPNILPQSQA
Trigger: AGCCTGGGATTGGGGAAGAATATTTGGTAGGTCACACAGGGCCAAAGCCTGTGGACAGAGACATGCCAACATGGAAAGAAAATGACACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CAA 90 bp GTTACAGGCACATGCTGCCACGTCTGGCTATTATGTGTGCGCTCATaGGCCCATGTCCTCAGCCTTCCCAAAGGGCATTTTAAAAGATGT +
Preference number: 2 (lower is better)
Translates to: VTGTCCHVWLLCVRS*AHVLSLPKGHFKRC
Trigger: ACATCTTTTAAAATGCCCTTTGGGAAGGCTGAGGACATGGGCCAATGAGCGCACACATAATAGCCAGACGTGGCAGCATGTGCCTGTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR TCA 90 bp GCTGCATCCCAGCATCCTTGGGTGCTTAACTGGGAGAGGAAGAGACCCAAGAGAATCCTTTTGCTCTCCTaGGCCTTTTTCAACAGAAAC +
Preference number: 2 (lower is better)
Translates to: AASQHPWVLNWERKRPKRILLLS*AFFNRN
Trigger: GTTTCTGTTGAAAAAGGCTCAGGAGAGCAAAAGGAT...TCTCTTGGGTCTCTTCCTCTCCCAGTTAAGCACCCAAGGATGCTGGGATGCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR GCA 90 bp GCTGCATCCCAGCATCCTTGGGTGCTTAACTGGGAGAGGAAGAGACCCAAGAGATATAGTGCCTTCGTCTaGCAAGTCACAGAGAAAACA +
Preference number: 2 (lower is better)
Translates to: AASQHPWVLNWERKRPKRYSAFV*QVTEKT
Trigger: TGTTTTCTCTGTGACTTGGCAGACGAAGGCACTATA...TCTCTTGGGTCTCTTCCTCTCCCAGTTAAGCACCCAAGGATGCTGGGATGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CCA 90 bp ACCTCAGGTCTCTACAAACACCTATACTCACGTGCACACCTCACACAGAGACATTATGTGTGCGCTCATTaGCCCATGTCCTCAGCCTTC +
Preference number: 2 (lower is better)
Translates to: TSGLYKHLYSRAHLTQRHYVCAH*PMSSAF
Trigger: GAAGGCTGAGGACATGGGCCAATGAGCGCACACATA...ATGTCTCTGTGTGAGGTGTGCACGTGAGTATAGGTGTTTGTAGAGACCTGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CCA 90 bp AGTTCCATCATTTCATTTCCAGTTGTATCACTGACCACTCCAGGGTCTTCAGTCTGGTGCACATGTACATaGGCCTGCGAGCTTGCGTGC +
Preference number: 2 (lower is better)
Translates to: SSIISFPVVSLTTPGSSVWCTCT*ACELAC
Trigger: GCACGCAAGCTCGCAGGCCCATGTACATGTGCACCA...GACTGAAGACCCTGGAGTGGTCAGTGATACAACTGGAAATGAAATGATGGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CCA 90 bp TCCACTGATGCTGAGACTTCAATAGCCCCAGCACTCGGCCCAGCATCTTGGCTTGAGCAGTACTCACTCTaGATGTTTGTAATGTACGGA +
Preference number: 2 (lower is better)
Translates to: STDAETSIAPALGPASWLEQYSL*MFVMYG
Trigger: TCCGTACATTACAAACATCCAGAGTGAGTACTGCTC...AAGCCAAGATGCTGGGCCGAGTGCTGGGGCTATTGAAGTCTCAGCATCAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CCA 90 bp TACATCGATGGCATTGTTGTTTCTGTGTGTACACGTGGCAACACGAAGCAGATGTTTTGCCCGACACTCTaGTATGGGTCCCCAGGAGTG +
Preference number: 2 (lower is better)
Translates to: YIDGIVVSVCTRGNTKQMFCPTL*YGSPGV
Trigger: CACTCCTGGGGACCCATACCAGAGTGTCGGGCAAAA...CATCTGCTTCGTGTTGCCACGTGTACACACAGAAACAACAATGCCATCGATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR TCA 90 bp CGCTCATTGGCCCATGTCCTCAGCCTTCCCAAAGGGCATTTTAAAAGATGTGCGAGAAAGAGTCTCAGTTaGACCCAGAGTTCATCCATG +
Preference number: 2 (lower is better)
Translates to: RSLAHVLSLPKGHFKRCARKSLS*TQSSSM
Trigger: CATGGATGAACTCTGGGTTCAACTGAGACTCTTTCT...CGCACATCTTTTAAAATGCCCTTTGGGAAGGCTGAGGACATGGGCCAATGAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR TCA 90 bp TACATCGATGGCATTGTTGTTTCTGTGTGTACACGTGGCAACACGAAGCAGATGCTGAGCCTCACCTTCTaGGTTCCTTCCTGCAAAGTG +
Preference number: 2 (lower is better)
Translates to: YIDGIVVSVCTRGNTKQMLSLTF*VPSCKV
Trigger: CACTTTGCAGGAAGGAACTCAGAAGGTGAGGCTCAG...CATCTGCTTCGTGTTGCCACGTGTACACACAGAAACAACAATGCCATCGATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR TCA 90 bp CAGTTCCATCATTTCATTTCCAGTTGTATCACTGACCACTCCAGGGTCTTCAGTACCCCAGGCCAGTCATaGGCAGTACTCACTCTGGAT +
Preference number: 2 (lower is better)
Translates to: QFHHFISSCITDHSRVFSTPGQS*AVLTLD
Trigger: ATCCAGAGTGAGTACTGCTCATGACTGGCCTGGGGT...ACTGAAGACCCTGGAGTGGTCAGTGATACAACTGGAAATGAAATGATGGAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR TCA 90 bp TACATCGATGGCATTGTTGTTTCTGTGTGTACACGTGGCAACACGAAGCAGATGCTGGCCTCACCTCTGTaGAGTTCCAGGGTATCTATC +
Preference number: 2 (lower is better)
Translates to: YIDGIVVSVCTRGNTKQMLASPL*SSRVSI
Trigger: GATAGATACCCTGGAACTTCACAGAGGTGAGGCCAG...CATCTGCTTCGTGTTGCCACGTGTACACACAGAAACAACAATGCCATCGATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR GCA 90 bp AGTTCCATCATTTCATTTCCAGTTGTATCACTGACCACTCCAGGGTCTTCAGTCCAGACTCTGGTCCCATaGTTTATGTGGAGGGCACCG +
Preference number: 2 (lower is better)
Translates to: SSIISFPVVSLTTPGSSVQTLVP*FMWRAP
Trigger: CGGTGCCCTCCACATAAAGCATGGGACCAGAGTCTG...GACTGAAGACCCTGGAGTGGTCAGTGATACAACTGGAAATGAAATGATGGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR GCA 90 bp TACATCGATGGCATTGTTGTTTCTGTGTGTACACGTGGCAACACGAAGCAGATGACGCCTTTCAACCACTaGAGGTACCATGCACACAGG +
Preference number: 2 (lower is better)
Translates to: YIDGIVVSVCTRGNTKQMTPFNH*RYHAHR
Trigger: CCTGTGTGCATGGTACCTGCAGTGGTTGAAAGGCGT...CATCTGCTTCGTGTTGCCACGTGTACACACAGAAACAACAATGCCATCGATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR GCA 90 bp TCCACTGATGCTGAGACTTCAATAGCCCCAGCACTCGGCCCAGCATCTTGGCTTTTGACTCTCCACTACTaGACCCAAATAAAATGCATC +
Preference number: 2 (lower is better)
Translates to: STDAETSIAPALGPASWLLTLHY*TQIKCI
Trigger: GATGCATTTTATTTGGGTGCAGTAGTGGAGAGTCAA...AAGCCAAGATGCTGGGCCGAGTGCTGGGGCTATTGAAGTCTCAGCATCAGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CCA 90 bp GGTGACAGTCACGGAGCAGCACACATGGCTTGCATGACATTCTGTTTTCTTTTTTCTGTCCACAGGCTTTaGCCCTGTGTGACCTACCAA +
Preference number: 2 (lower is better)
Translates to: GDSHGAAHMACMTFCFLFSVHRL*PCVTYQ
Trigger: TTGGTAGGTCACACAGGGCCAAAGCCTGTGGACAGA...AAAAAGAAAACAGAATGTCATGCAAGCCATGTGTGCTGCTCCGTGACTGTCACC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CCA 90 bp CTTTGCTCAAAACCAAATGAGATCTGCTTAACTGCCTTACATAGGAGAGGCCAGATTTGGCTATCTGGCTaGCCAGGGAGTTCCTGGACC +
Preference number: 2 (lower is better)
Translates to: LCSKPNEICLTALHRRGQIWLSG*PGSSWT
Trigger: GGTCCAGGAACTCCCTGGCCAGCCAGATAGCCAAAT...CTGGCCTCTCCTATGTAAGGCAGTTAAGCAGATCTCATTTGGTTTTGAGCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CCA 90 bp TACATCGATGGCATTGTTGTTTCTGTGTGTACACGTGGCAACACGAAGCAGATGCCTTGGGTGCTTAACTaGGAGAGGAAGAGACCCAAG +
Preference number: 2 (lower is better)
Translates to: YIDGIVVSVCTRGNTKQMPWVLN*ERKRPK
Trigger: CTTGGGTCTCTTCCTCTCCCAGTTAAGCACCCAAGG...CATCTGCTTCGTGTTGCCACGTGTACACACAGAAACAACAATGCCATCGATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CAA 90 bp GCATGGGGAAGCCAGAGAACAACTCTGATGTTGCTCCTTGGTTTTTaGAGACAGGATCTCTCATCAGCTTGTAGCTCAGCACATAGGCTA +
Preference number: 2 (lower is better)
Translates to: AWGSQRTTLMLLLGF*RQDLSSACSSAHRL
Trigger: TAGCCTATGTGCTGAGCTACAAGCTGATGAGAGATCCTGTCTCAAAAAACCAAGGAGCAACATCAGAGTTGTTCTCTGGCTTCCCCATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR TCA 90 bp CATTTCCCAATGCTCCATCATTCCTCTATCTCTGAGCCTCACCTTCTGAGTTCCCCTAGATCACGCTCATaGTGCTCACAACATCTGACT +
Preference number: 2 (lower is better)
Translates to: HFPMLHHSSISEPHLLSSPRSRS*CSQHLT
Trigger: AGTCAGATGTTGTGAGCATCATGAGCGTGATCTAGG...GGAACTCAGAAGGTGAGGCTCAGAGATAGAGGAATGATGGAGCATTGGGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR GCA 90 bp CAGTTCCATCATTTCATTTCCAGTTGTATCACTGACCACTCCAGGGTCTTCAGTACATGTACATGGGCCTaGGAGCTTGCGTGCACATGT +
Preference number: 2 (lower is better)
Translates to: QFHHFISSCITDHSRVFSTCTWA*ELACTC
Trigger: ACATGTGCACGCAAGCTCGCAGGCCCATGTACATGT...ACTGAAGACCCTGGAGTGGTCAGTGATACAACTGGAAATGAAATGATGGAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR GCA 90 bp AGTTCCATCATTTCATTTCCAGTTGTATCACTGACCACTCCAGGGTCTTCAGTCGAGCTCCCCACAACATaGCCACAGGTTCTGCTAGAA +
Preference number: 2 (lower is better)
Translates to: SSIISFPVVSLTTPGSSVELPTT*PQVLLE
Trigger: TTCTAGCAGAACCTGTGGGCATGTTGTGGGGAGCTC...GACTGAAGACCCTGGAGTGGTCAGTGATACAACTGGAAATGAAATGATGGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR GCA 90 bp TCCACTGATGCTGAGACTTCAATAGCCCCAGCACTCGGCCCAGCATCTTGGCTTAAACCAAATGAGATCTaGTTAACTGCCTTACATAGG +
Preference number: 2 (lower is better)
Translates to: STDAETSIAPALGPASWLKPNEI*LTALHR
Trigger: CCTATGTAAGGCAGTTAAGCAGATCTCATTTGGTTT...AAGCCAAGATGCTGGGCCGAGTGCTGGGGCTATTGAAGTCTCAGCATCAGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CCA 90 bp CCTCCATCACTGTATAGTGCCTTCGTCTGCCAAGTCACAGAGAAAACATACCCTTTCCCAGCACCCACATaGAGATTGATGGACAGACAT +
Preference number: 2 (lower is better)
Translates to: PPSLYSAFVCQVTEKTYPFPAPT*RLMDRH
Trigger: ATGTCTGTCCATCAATCTCCATGTGGGTGCTGGGAA...AGGGTATGTTTTCTCTGTGACTTGGCAGACGAAGGCACTATACAGTGATGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CCA 90 bp TGCCTTTGGTTTTGTAGCACCCGGGGCAGAGTGGTTTGGCATTGCTACATCGATCAGTTCACTTTAATATaGGTGTCCAGGACAGAAAGC +
Preference number: 2 (lower is better)
Translates to: CLWFCSTRGRVVWHCYIDQFTLI*VSRTES
Trigger: GCTTTCTGTCCTGGACACCCATATTAAAGTGAACTG...ATCGATGTAGCAATGCCAAACCACTCTGCCCCGGGTGCTACAAAACCAAAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR TCA 90 bp TGCCTTTGGTTTTGTAGCACCCGGGGCAGAGTGGTTTGGCATTGCTACATCGATCACACATGGCTTGCATaGCATTCTGTTTTCTTTTTG +
Preference number: 2 (lower is better)
Translates to: CLWFCSTRGRVVWHCYIDHTWLA*HSVFFL
Trigger: CAAAAAGAAAACAGAATGTCATGCAAGCCATGTGTG...ATCGATGTAGCAATGCCAAACCACTCTGCCCCGGGTGCTACAAAACCAAAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR GCA 90 bp CTTTGCTCAAAACCAAATGAGATCTGCTTAACTGCCTTACATAGGAGAGGCCAGTCTGGCTATTATGTGTaGGCTCATTGGCCCATGTCC +
Preference number: 2 (lower is better)
Translates to: LCSKPNEICLTALHRRGQSGYYV*AHWPMS
Trigger: GGACATGGGCCAATGAGCGCACACATAATAGCCAGA...CTGGCCTCTCCTATGTAAGGCAGTTAAGCAGATCTCATTTGGTTTTGAGCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR GCA 90 bp AATAAGCTGGTTTGTACTGTAGCTGAGAATAATCCTTGGCTTTCTTTGTACAACATGGGCCTGCGAGCTTaGGTGCACATGTGCATGGGG +
Preference number: 2 (lower is better)
Translates to: NKLVCTVAENNPWLSLYNMGLRA*VHMCMG
Trigger: CCCCATGCACATGTGCACGCAAGCTCGCAGGCCCAT...GTTGTACAAAGAAAGCCAAGGATTATTCTCAGCTACAGTACAAACCAGCTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CCA 90 bp CGCCTTTCAACCACTGCAGGTACCATGCACACAGGGAAAACATTCATACAAATAAAAACCTTGCCAATTTaGCTATCTGGCTGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: RLSTTAGTMHTGKTFIQIKTLPI*LSGWPG
Trigger: CCCTGGCCAGCCAGATAGCCAAATTGGCAAGGTTTT...TATTTGTATGAATGTTTTCCCTGTGTGCATGGTACCTGCAGTGGTTGAAAGGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CCA 90 bp AGTTCCATCATTTCATTTCCAGTTGTATCACTGACCACTCCAGGGTCTTCAGTCATGTACGAGTGCCCTTaGAGACTAGAAGAGGGTGTC +
Preference number: 2 (lower is better)
Translates to: SSIISFPVVSLTTPGSSVMYECP*RLEEGV
Trigger: GACACCCTCTTCTAGTCTCCAAGGGCACTCGTACAT...GACTGAAGACCCTGGAGTGGTCAGTGATACAACTGGAAATGAAATGATGGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CCA 90 bp GCTGCATCCCAGCATCCTTGGGTGCTTAACTGGGAGAGGAAGAGACCCAAGAGAAATGCATCCTATATATaGCCTCATCATAGACCTTTA +
Preference number: 2 (lower is better)
Translates to: AASQHPWVLNWERKRPKRNASYI*PHHRPL
Trigger: TAAAGGTCTATGATGAGGCCATATATAGGATGCATT...TCTCTTGGGTCTCTTCCTCTCCCAGTTAAGCACCCAAGGATGCTGGGATGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR TCA 90 bp AGTTCCATCATTTCATTTCCAGTTGTATCACTGACCACTCCAGGGTCTTCAGTCCACTGTAGACGTTGTTaGTTGGAGTTCACGCTGTGT +
Preference number: 2 (lower is better)
Translates to: SSIISFPVVSLTTPGSSVHCRRC*LEFTLC
Trigger: ACACAGCGTGAACTCCAATCAACAACGTCTACAGTG...GACTGAAGACCCTGGAGTGGTCAGTGATACAACTGGAAATGAAATGATGGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR TCA 90 bp ACCTCAGGTCTCTACAAACACCTATACTCACGTGCACACCTCACACAGAGACATAACACTTACTTCCTGTaGAACACTTCCTGTGAAAGC +
Preference number: 2 (lower is better)
Translates to: TSGLYKHLYSRAHLTQRHNTYFL*NTSCES
Trigger: GCTTTCACAGGAAGTGTTTCACAGGAAGTAAGTGTT...ATGTCTCTGTGTGAGGTGTGCACGTGAGTATAGGTGTTTGTAGAGACCTGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR GCA 90 bp AGTTCCATCATTTCATTTCCAGTTGTATCACTGACCACTCCAGGGTCTTCAGTCTTCTGGGCCATCCTCTaGTACAGAATGAGAGTGAGA +
Preference number: 2 (lower is better)
Translates to: SSIISFPVVSLTTPGSSVFWAIL*YRMRVR
Trigger: TCTCACTCTCATTCTGTAGCAGAGGATGGCCCAGAA...GACTGAAGACCCTGGAGTGGTCAGTGATACAACTGGAAATGAAATGATGGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR GCA 90 bp CAGTTCCATCATTTCATTTCCAGTTGTATCACTGACCACTCCAGGGTCTTCAGTACACCTATACTCACGTaGACACCTCACACAGAGACA +
Preference number: 2 (lower is better)
Translates to: QFHHFISSCITDHSRVFSTPILT*TPHTET
Trigger: TGTCTCTGTGTGAGGTGTGCACGTGAGTATAGGTGT...ACTGAAGACCCTGGAGTGGTCAGTGATACAACTGGAAATGAAATGATGGAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR TCA 90 bp CCTCCATCACTGTATAGTGCCTTCGTCTGCCAAGTCACAGAGAAAACATACCCTATAACTTTGAATTTCTaGTCCTCTACTTCTACCCCC +
Preference number: 2 (lower is better)
Translates to: PPSLYSAFVCQVTEKTYPITLNF*SSTSTP
Trigger: GGGGGTAGAAGTAGAGGATCAGAAATTCAAAGTTAT...AGGGTATGTTTTCTCTGTGACTTGGCAGACGAAGGCACTATACAGTGATGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR GCA 90 bp CAGTTCCATCATTTCATTTCCAGTTGTATCACTGACCACTCCAGGGTCTTCAGTGCTGGCATTTCCCAATaGTCCATCATTCCTCTATCT +
Preference number: 2 (lower is better)
Translates to: QFHHFISSCITDHSRVFSAGISQ*SIIPLS
Trigger: AGATAGAGGAATGATGGAGCATTGGGAAATGCCAGC...ACTGAAGACCCTGGAGTGGTCAGTGATACAACTGGAAATGAAATGATGGAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CCA 90 bp GGTGACAGTCACGGAGCAGCACACATGGCTTGCATGACATTCTGTTTTCTTTTTATTTTCTTTCCATGTTaGCATGTCTCTGTCCACAGG +
Preference number: 2 (lower is better)
Translates to: GDSHGAAHMACMTFCFLFIFFPC*HVSVHR
Trigger: CCTGTGGACAGAGACATGCCAACATGGAAAGAAAAT...AAAAAGAAAACAGAATGTCATGCAAGCCATGTGTGCTGCTCCGTGACTGTCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CAA 90 bp CCCAAAGGGCATTTTAAAAGATGTGCGCGTGTGTGTTTGTTGTTGTaGTTGTTGCACATGTATGCAGATGTGCATGTACATGTGTGTGCA +
Preference number: 2 (lower is better)
Translates to: PKGHFKRCARVCLLL*LLHMYADVHVHVCA
Trigger: TGCACACACATGTACATGCACATCTGCATACATGTGCAACAACAACAACAACAAACACACACGCGCACATCTTTTAAAATGCCCTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR GCA 90 bp TACATCGATGGCATTGTTGTTTCTGTGTGTACACGTGGCAACACGAAGCAGATGATTCTTTTAGGGATTTaGGTGTGTGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: YIDGIVVSVCTRGNTKQMILLGI*VCVCVC
Trigger: ACACACACACACACACACGCAAATCCCTAAAAGAAT...CATCTGCTTCGTGTTGCCACGTGTACACACAGAAACAACAATGCCATCGATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CCA 90 bp GGTGACAGTCACGGAGCAGCACACATGGCTTGCATGACATTCTGTTTTCTTTTTTCTGTTTACTTTAATTaGTGCACATGTACATGGGCC +
Preference number: 2 (lower is better)
Translates to: GDSHGAAHMACMTFCFLFSVYFN*CTCTWA
Trigger: GGCCCATGTACATGTGCACCAATTAAAGTAAACAGA...AAAAAGAAAACAGAATGTCATGCAAGCCATGTGTGCTGCTCCGTGACTGTCACC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CCA 90 bp CTTTGCTCAAAACCAAATGAGATCTGCTTAACTGCCTTACATAGGAGAGGCCAGTTAATGATGATGGGGTaGAGAAATGGCTCATCAGGT +
Preference number: 2 (lower is better)
Translates to: LCSKPNEICLTALHRRGQLMMMG*RNGSSG
Trigger: ACCTGATGAGCCATTTCTCCACCCCATCATCATTAA...CTGGCCTCTCCTATGTAAGGCAGTTAAGCAGATCTCATTTGGTTTTGAGCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR TCA 90 bp TTCCATGTCCAAGAGATCTGGGCAGTTCCATCATTTCATTTCCAGTTGTATCACTTCTCAGGCCAAGCTTaGCATTCTTTTAGGGATTTG +
Preference number: 2 (lower is better)
Translates to: FHVQEIWAVPSFHFQLYHFSGQA*HSFRDL
Trigger: CAAATCCCTAAAAGAATGTCAAGCTTGGCCTGAGAA...GTGATACAACTGGAAATGAAATGATGGAACTGCCCAGATCTCTTGGACATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CCA 90 bp TACATCGATGGCATTGTTGTTTCTGTGTGTACACGTGGCAACACGAAGCAGATGTATCACGGCTTCAAATaGGAGGGAAATTATAAAGCA +
Preference number: 2 (lower is better)
Translates to: YIDGIVVSVCTRGNTKQMYHGFK*EGNYKA
Trigger: TGCTTTATAATTTCCCTCCCATTTGAAGCCGTGATA...CATCTGCTTCGTGTTGCCACGTGTACACACAGAAACAACAATGCCATCGATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CAA 90 bp GGGCATTTTAAAAGATGTGCGCGTGTGTGTTTGTTGTTGTTGTTGTaGCACATGTATGCAGATGTGCATGTACATGTGTGTGCATATAGA +
Preference number: 2 (lower is better)
Translates to: GHFKRCARVCLLLLL*HMYADVHVHVCAYR
Trigger: TCTATATGCACACACATGTACATGCACATCTGCATACATGTGCAACAACAACAACAACAAACACACACGCGCACATCTTTTAAAATGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CAA 90 bp TGCTTAACTGCCTTACATAGGAGAGGCCAGAAGAGAAAAATCTGTTaGGCCTCTGTTGTTAATCCTGTCTTTAGAAGCACGTCTTTTTGT +
Preference number: 2 (lower is better)
Translates to: CLTALHRRGQKRKIC*ASVVNPVFRSTSFC
Trigger: ACAAAAAGACGTGCTTCTAAAGACAGGATTAACAACAGAGGCCAAACAGATTTTTCTCTTCTGGCCTCTCCTATGTAAGGCAGTTAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CCA 90 bp CAGTTCCATCATTTCATTTCCAGTTGTATCACTGACCACTCCAGGGTCTTCAGTGCTGAGAATAATCCTTaGCTTTCTTTGTACAACACA +
Preference number: 2 (lower is better)
Translates to: QFHHFISSCITDHSRVFSAENNP*LSLYNT
Trigger: TGTGTTGTACAAAGAAAGCCAAGGATTATTCTCAGC...ACTGAAGACCCTGGAGTGGTCAGTGATACAACTGGAAATGAAATGATGGAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CCA 90 bp CAGTTCCATCATTTCATTTCCAGTTGTATCACTGACCACTCCAGGGTCTTCAGTAGAGAAAAATCTGTTTaGCCTCTGTTGTTAATCCTG +
Preference number: 2 (lower is better)
Translates to: QFHHFISSCITDHSRVFSREKSV*PLLLIL
Trigger: CAGGATTAACAACAGAGGCCAAACAGATTTTTCTCT...ACTGAAGACCCTGGAGTGGTCAGTGATACAACTGGAAATGAAATGATGGAACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CAA 90 bp AAAGGGCATTTTAAAAGATGTGCGCGTGTGTGTTTGTTGTTGTTGTaGTTGCACATGTATGCAGATGTGCATGTACATGTGTGTGCATAT +
Preference number: 2 (lower is better)
Translates to: KGHFKRCARVCLLLL*LHMYADVHVHVCAY
Trigger: ATATGCACACACATGTACATGCACATCTGCATACATGTGCAACAACAACAACAACAAACACACACGCGCACATCTTTTAAAATGCCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR TCA 90 bp AATAAGCTGGTTTGTACTGTAGCTGAGAATAATCCTTGGCTTTCTTTGTACAACGCCAGAGAACAACTCTaGTGTTGCTCCTTGGTTTTT +
Preference number: 2 (lower is better)
Translates to: NKLVCTVAENNPWLSLYNAREQL*CCSLVF
Trigger: AAAAACCAAGGAGCAACATCAGAGTTGTTCTCTGGC...GTTGTACAAAGAAAGCCAAGGATTATTCTCAGCTACAGTACAAACCAGCTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR GCA 90 bp CGCCTTTCAACCACTGCAGGTACCATGCACACAGGGAAAACATTCATACAAATAAAAATCACCTTCTTTTaGGTTCCTCTTACTATCTCT +
Preference number: 2 (lower is better)
Translates to: RLSTTAGTMHTGKTFIQIKITFF*VPLTIS
Trigger: AGAGATAGTAAGAGGAACGCAAAAGAAGGTGATTTT...TATTTGTATGAATGTTTTCCCTGTGTGCATGGTACCTGCAGTGGTTGAAAGGCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 72 bp GCTCTGGGATCGCCGCCACCTCTGCCTTCTGAGTGCTaGGATCACAGGTGGGCTACCACAGCCTCCCCTCAC +
Preference number: 3 (lower is better)
Translates to: ALGSPPPLPSEC*DHRWATTASPH
Trigger: GTGAGGGGAGGCTGTGGTAGCCCACCTGTGATCCCAGCACTCAGAAGGCAGAGGTGGCGGCGATCCCAGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR TCA 72 bp CCAGCTTGCTCTGGGATCGCCGCCACCTCTGCCTTCTaGGTGCTGGGATCACAGGTGGGCTACCACAGCCTC +
Preference number: 3 (lower is better)
Translates to: PACSGIAATSAF*VLGSQVGYHSL
Trigger: GAGGCTGTGGTAGCCCACCTGTGATCCCAGCACTCAGAAGGCAGAGGTGGCGGCGATCCCAGAGCAAGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR GCA 72 bp CTTGCTCTGGGATCGCCGCCACCTCTGCCTTCTGAGTaGTGGGATCACAGGTGGGCTACCACAGCCTCCCCT +
Preference number: 3 (lower is better)
Translates to: LALGSPPPLPSE*WDHRWATTASP
Trigger: AGGGGAGGCTGTGGTAGCCCACCTGTGATCCCAGCACTCAGAAGGCAGAGGTGGCGGCGATCCCAGAGCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR GCA 72 bp CGTCTAGGGGCTAGGGAGACGGGCTCTGCCGTTGGGTaGACTAGCTGCTCTTGCAGATGTGTTCCCAGCACC +
Preference number: 3 (lower is better)
Translates to: RLGARETGSAVG*TSCSCRCVPST
Trigger: GGTGCTGGGAACACATCTGCAAGAGCAGCTAGTGCACCCAACGGCAGAGCCCGTCTCCCTAGCCCCTAGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR GCA 72 bp GCTAGGGAGACGGGCTCTGCCGTTGGGTGCACTAGCTaGTCTTGCAGATGTGTTCCCAGCACCCACATGGAG +
Preference number: 3 (lower is better)
Translates to: ARETGSAVGCTS*SCRCVPSTHME
Trigger: CTCCATGTGGGTGCTGGGAACACATCTGCAAGAGCAGCTAGTGCACCCAACGGCAGAGCCCGTCTCCCTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 72 bp CCGCCACCTCTGCCTTCTGAGTGCTGGGATCACAGGTaGGCTACCACAGCCTCCCCTCACTTATGTGGGTTC +
Preference number: 3 (lower is better)
Translates to: PPPLPSECWDHR*ATTASPHLCGF
Trigger: GAACCCACATAAGTGAGGGGAGGCTGTGGTAGCCCACCTGTGATCCCAGCACTCAGAAGGCAGAGGTGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 72 bp TCACAGGTGGGCTACCACAGCCTCCCCTCACTTATGTaGGTTCTGGGGACCCAGACTCTGGTCCCATGCTTT +
Preference number: 3 (lower is better)
Translates to: SQVGYHSLPSLM*VLGTQTLVPCF
Trigger: AAAGCATGGGACCAGAGTCTGGGTCCCCAGAACCCACATAAGTGAGGGGAGGCTGTGGTAGCCCACCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 72 bp CTGGCCAGGGAGTTCCTGGACCTTGCTCCCCAGTACTaGAGTTACAGGCACATGCTGCCACGTCTGGCTATT +
Preference number: 3 (lower is better)
Translates to: LAREFLDLAPQY*SYRHMLPRLAI
Trigger: AATAGCCAGACGTGGCAGCATGTGCCTGTAACTCCAGTACTGGGGAGCAAGGTCCAGGAACTCCCTGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 72 bp GAGACTGCTGCATCCCAGCATCCTTGGGTGCTTAACTaGGAGAGGAAGAGACCCAAGAGACCCGAGGAGGCA +
Preference number: 3 (lower is better)
Translates to: ETAASQHPWVLN*ERKRPKRPEEA
Trigger: TGCCTCCTCGGGTCTCTTGGGTCTCTTCCTCTCCCAGTTAAGCACCCAAGGATGCTGGGATGCAGCAGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 72 bp TGTGCATCTATAACCAAGGGCCCAGGAGTCCCAGGGTaGGGTCTGAGTCCCAGGCAGGCGACAAAACTGCAA +
Preference number: 3 (lower is better)
Translates to: CASITKGPGVPG*GLSPRQATKLQ
Trigger: TTGCAGTTTTGTCGCCTGCCTGGGACTCAGACCCCACCCTGGGACTCCTGGGCCCTTGGTTATAGATGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR GCA 72 bp GAGACGGGCTCTGCCGTTGGGTGCACTAGCTGCTCTTaGAGATGTGTTCCCAGCACCCACATGGAGATTGAT +
Preference number: 3 (lower is better)
Translates to: ETGSAVGCTSCS*RCVPSTHMEID
Trigger: ATCAATCTCCATGTGGGTGCTGGGAACACATCTGCAAGAGCAGCTAGTGCACCCAACGGCAGAGCCCGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR GCA 72 bp TGTGTGTACACGTGGCAACACGAAGCAGATGTTTGCTaGCAGCTCAGAGAGGGGAATACTGTTGGCCGGGGG +
Preference number: 3 (lower is better)
Translates to: CVYTWQHEADVC*QLREGNTVGRG
Trigger: CCCCCGGCCAACAGTATTCCCCTCTCTGAGCTGGCAGCAAACATCTGCTTCGTGTTGCCACGTGTACACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR GCA 72 bp TCTCTCAGTGTGCTTCCGGAGGTGTGTGCCTCTCTCTaGCTTTGGTTTTGTAGCACCCGGGGCAGAGTGGTT +
Preference number: 3 (lower is better)
Translates to: SLSVLPEVCASL*LWFCSTRGRVV
Trigger: AACCACTCTGCCCCGGGTGCTACAAAACCAAAGGCAGAGAGAGGCACACACCTCCGGAAGCACACTGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 72 bp TGGGCTACCACAGCCTCCCCTCACTTATGTGGGTTCTaGGGACCCAGACTCTGGTCCCATGCTTTATGTGGA +
Preference number: 3 (lower is better)
Translates to: WATTASPHLCGF*GPRLWSHALCG
Trigger: TCCACATAAAGCATGGGACCAGAGTCTGGGTCCCCAGAACCCACATAAGTGAGGGGAGGCTGTGGTAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 72 bp AGTGTGCTTCCGGAGGTGTGTGCCTCTCTCTGCCTTTaGTTTTGTAGCACCCGGGGCAGAGTGGTTTGGCAT +
Preference number: 3 (lower is better)
Translates to: SVLPEVCASLCL*FCSTRGRVVWH
Trigger: ATGCCAAACCACTCTGCCCCGGGTGCTACAAAACCAAAGGCAGAGAGAGGCACACACCTCCGGAAGCACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CAA 90 bp GCTGCATCCCAGCATCCTTGGGTGCTTAACTGGGAGAGGAAGAGACCCAAGAGAGTCCCTCCCTTTCGTTaGACTCTCCACTACTGCACC +
Preference number: 3 (lower is better)
Translates to: AASQHPWVLNWERKRPKRVPPFR*TLHYCT
Trigger: GGTGCAGTAGTGGAGAGTCAAACGAAAGGGAGGGAC...TCTCTTGGGTCTCTTCCTCTCCCAGTTAAGCACCCAAGGATGCTGGGATGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR TCA 72 bp CTCTCGTTTCCCTACAGTCGCCTCTGCTCTAAGAAGTaGGAGCTAAACCACGTGTGGTGGCCCAGCACTTGG +
Preference number: 3 (lower is better)
Translates to: LSFPYSRLCSKK*ELNHVWWPSTW
Trigger: CCAAGTGCTGGGCCACCACACGTGGTTTAGCTCTCACTTCTTAGAGCAGAGGCGACTGTAGGGAAACGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR GCA 72 bp AACAGTGACAGTGAACCGGCCGGGATGACTTCTCCCTaGCATCCTCTGGCCAGGACTGCAGAGATTCTGTAT +
Preference number: 3 (lower is better)
Translates to: NSDSEPAGMTSP*HPLARTAEILY
Trigger: ATACAGAATCTCTGCAGTCCTGGCCAGAGGATGGCAGGGAGAAGTCATCCCGGCCGGTTCACTGTCACTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR GCA 72 bp GCAGAAGCAGGCGATCGGAAATTCTGGGCCATCCTCTaGTACAGAATGAGAGTGAGAGCACCTTGGGCTAGG +
Preference number: 3 (lower is better)
Translates to: AEAGDRKFWAIL*YRMRVRAPWAR
Trigger: CCTAGCCCAAGGTGCTCTCACTCTCATTCTGTAGCAGAGGATGGCCCAGAATTTCCGATCGCCTGCTTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 72 bp TTGCCAATTTGGCTATCTGGCTGGCCAGGGAGTTCCTaGACCTTGCTCCCCAGTACTGGAGTTACAGGCACA +
Preference number: 3 (lower is better)
Translates to: LPIWLSGWPGSS*TLLPSTGVTGT
Trigger: TGTGCCTGTAACTCCAGTACTGGGGAGCAAGGTCCAGGAACTCCCTGGCCAGCCAGATAGCCAAATTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 72 bp CTCTCCCTGAACAAAAACCTTGCCAATTTGGCTATCTaGCTGGCCAGGGAGTTCCTGGACCTTGCTCCCCAG +
Preference number: 3 (lower is better)
Translates to: LSLNKNLANLAI*LAREFLDLAPQ
Trigger: CTGGGGAGCAAGGTCCAGGAACTCCCTGGCCAGCCAGATAGCCAAATTGGCAAGGTTTTTGTTCAGGGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 72 bp CACCCTGTTCCACCAAGGTCCTTCAAGTCTAGGTCTTaGGAACCCACTGGTGCTCCATCCACTGATGCTGAG +
Preference number: 3 (lower is better)
Translates to: HPVPPRSFKSRS*EPTGAPSTDAE
Trigger: CTCAGCATCAGTGGATGGAGCACCAGTGGGTTCCCAAGACCTAGACTTGAAGGACCTTGGTGGAACAGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CAA 90 bp TGCCTTTGGTTTTGTAGCACCCGGGGCAGAGTGGTTTGGCATTGCTACATCGATCTCTGTCCACAGGCTTaGGCCCTGTGTGACCTACCA +
Preference number: 3 (lower is better)
Translates to: CLWFCSTRGRVVWHCYIDLCPQA*ALCDLP
Trigger: TGGTAGGTCACACAGGGCCAAAGCCTGTGGACAGAG...ATCGATGTAGCAATGCCAAACCACTCTGCCCCGGGTGCTACAAAACCAAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR GCA 72 bp CGGGATGACTTCTCCCTGCCATCCTCTGGCCAGGACTaGAGAGATTCTGTATGGGATTCTGTATGCGGACAT +
Preference number: 3 (lower is better)
Translates to: RDDFSLPSSGQD*RDSVWDSVCGH
Trigger: ATGTCCGCATACAGAATCCCATACAGAATCTCTGCAGTCCTGGCCAGAGGATGGCAGGGAGAAGTCATCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR GCA 72 bp AGCACAGCTGTGTTCTGGAGCTGCATCCTGACCAGTTaGGTAGAGGCTGAAGTACTGGCAACACTTCCTGTG +
Preference number: 3 (lower is better)
Translates to: STAVFWSCILTS*VEAEVLATLPV
Trigger: CACAGGAAGTGTTGCCAGTACTTCAGCCTCTACGCAACTGGTCAGGATGCAGCTCCAGAACACAGCTGTGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR GCA 72 bp TTCTGTGTGTACACGTGGCAACACGAAGCAGATGTTTaGTGCCAGCTCAGAGAGGGGAATACTGTTGGCCGG +
Preference number: 3 (lower is better)
Translates to: FCVYTWQHEADV*CQLREGNTVGR
Trigger: CCGGCCAACAGTATTCCCCTCTCTGAGCTGGCAGCAAACATCTGCTTCGTGTTGCCACGTGTACACACAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR GCA 72 bp CCAGGCAGGCGACAAAACTGCAAATATCTCTCAGTGTaGTTCCGGAGGTGTGTGCCTCTCTCTGCCTTTGGT +
Preference number: 3 (lower is better)
Translates to: PGRRQNCKYLSV*FRRCVPLSAFG
Trigger: ACCAAAGGCAGAGAGAGGCACACACCTCCGGAAGCACACTGAGAGATATTTGCAGTTTTGTCGCCTGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR GCA 72 bp CGCAGGCTGAAATGTCTGCGTAAGTTCCCAGAGGGATaGTGCAGAGGACAGACTGGACGGTCACACAAAATG +
Preference number: 3 (lower is better)
Translates to: RRLKCLRKFPEG*CRGQTGRSHKM
Trigger: CATTTTGTGTGACCGTCCAGTCTGTCCTCTGCAGCATCCCTCTGGGAACTTACGCAGACATTTCAGCCTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 72 bp TGTACATGGGCCTGCGAGCTTGCGTGCACATGTGCATaGGGAAGCCAGAGAACAACTCTGATGTTGCTCCTT +
Preference number: 3 (lower is better)
Translates to: CTWACELACTCA*GSQRTTLMLLL
Trigger: AAGGAGCAACATCAGAGTTGTTCTCTGGCTTCCCCATGCACATGTGCACGCAAGCTCGCAGGCCCATGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 72 bp ACAGATGAGTACCAGGCCACTGTGCTGGGCACATCCTaGAGACATGAGCCTCCATCACTGTATAGTGCCTTC +
Preference number: 3 (lower is better)
Translates to: TDEYQATVLGTS*RHEPPSLYSAF
Trigger: GAAGGCACTATACAGTGATGGAGGCTCATGTCTCCAGGATGTGCCCAGCACAGTGGCCTGGTACTCATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR TCA 72 bp GTTGGCATGTCTCTGTCCACAGGCTTTGGCCCTGTGTaGCCTACCAAATATTCTTCCCCAATCCCAGGCTCA +
Preference number: 3 (lower is better)
Translates to: VGMSLSTGFGPV*PTKYSSPIPGS
Trigger: TGAGCCTGGGATTGGGGAAGAATATTTGGTAGGTCACACAGGGCCAAAGCCTGTGGACAGAGACATGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR GCA 72 bp ATACCTGCCATCCAAACAACGTGTCTTTCCAAAAGCTaGCAGCTTCGGGGACGACCACTGCCCACACCTTAT +
Preference number: 3 (lower is better)
Translates to: IPAIQTTCLSKS*QLRGRPLPTPY
Trigger: ATAAGGTGTGGGCAGTGGTCGTCCCCGAAGCTGGCAGCTTTTGGAAAGACACGTTGTTTGGATGGCAGGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 72 bp AGCACTTGGAAGGCAGAAGCAGGCGATCGGAAATTCTaGGCCATCCTCTGCTACAGAATGAGAGTGAGAGCA +
Preference number: 3 (lower is better)
Translates to: STWKAEAGDRKF*AILCYRMRVRA
Trigger: TGCTCTCACTCTCATTCTGTAGCAGAGGATGGCCCAGAATTTCCGATCGCCTGCTTCTGCCTTCCAAGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 72 bp CCCCGAGTGCTGGAAGTGGGACGTGTATCATCACAGTaGTTTATGCAATGCTGGGGACCAAACTTTGGCTCA +
Preference number: 3 (lower is better)
Translates to: PRVLEVGRVSSQ*FMQCWGPNFGS
Trigger: TGAGCCAAAGTTTGGTCCCCAGCATTGCATAAACCACTGTGATGATACACGTCCCACTTCCAGCACTCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 72 bp CATACCCTTTCTCTTTCTGTCTTAGTGGGGCCTCCTTaGAAGGCGCCTAACCAAGCCAGACTCTGTATCCTC +
Preference number: 3 (lower is better)
Translates to: HTLSLSVLVGPP*KAPNQARLCIL
Trigger: GAGGATACAGAGTCTGGCTTGGTTAGGCGCCTTCCAAGGAGGCCCCACTAAGACAGAAAGAGAAAGGGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 72 bp CACCCGGGGCAGAGTGGTTTGGCATTGCTACATCGATaGCATTGTTGTTTCTGTGTGTACACGTGGCAACAC +
Preference number: 3 (lower is better)
Translates to: HPGQSGLALLHR*HCCFCVYTWQH
Trigger: GTGTTGCCACGTGTACACACAGAAACAACAATGCCATCGATGTAGCAATGCCAAACCACTCTGCCCCGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CAA 90 bp CCAGGAGTGTGTCATCTGTCCCTGTGTATACGGCTGTCCAGTGTGACTTTGAGTTATGTACGAGTGCCCTaGGAGACTAGAAGAGGGTGT +
Preference number: 3 (lower is better)
Translates to: PGVCHLSLCIRLSSVTLSYVRVP*ETRRGC
Trigger: ACACCCTCTTCTAGTCTCCAAGGGCACTCGTACATA...ACTCAAAGTCACACTGGACAGCCGTATACACAGGGACAGATGACACACTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CAA 90 bp GGACGGTCACACAAAATGCAACATCCTCTTCCATGTCCAAGAGATCTGGGCAGTTTGCATGCCGTGTTTTaGCCCGACACTCTGGTATGG +
Preference number: 3 (lower is better)
Translates to: GRSHKMQHPLPCPRDLGSLHAVF*PDTLVW
Trigger: CCATACCAGAGTGTCGGGCAAAAACACGGCATGCAA...ACTGCCCAGATCTCTTGGACATGGAAGAGGATGTTGCATTTTGTGTGACCGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR TCA 72 bp GTTCTGGAGCTGCATCCTGACCAGTTGCGTAGAGGCTaGAGTACTGGCAACACTTCCTGTGAAACACTTCCT +
Preference number: 3 (lower is better)
Translates to: VLELHPDQLRRG*STGNTSCETLP
Trigger: AGGAAGTGTTTCACAGGAAGTGTTGCCAGTACTTCAGCCTCTACGCAACTGGTCAGGATGCAGCTCCAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR TCA 72 bp ACACCCATGTCTAGCAACTCCGTCTCTGGGGGAATCTaGCACCTCAGGTCTCTACAAACACCTATACTCACG +
Preference number: 3 (lower is better)
Translates to: TPMSSNSVSGGI*HLRSLQTPILT
Trigger: CGTGAGTATAGGTGTTTGTAGAGACCTGAGGTGTCAGATTCCCCCAGAGACGGAGTTGCTAGACATGGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR GCA 72 bp TCTGTTTACTTTAATTGGTGCACATGTACATGGGCCTaGGAGCTTGCGTGCACATGTGCATGGGGAAGCCAG +
Preference number: 3 (lower is better)
Translates to: SVYFNWCTCTWA*ELACTCAWGSQ
Trigger: CTGGCTTCCCCATGCACATGTGCACGCAAGCTCGCAGGCCCATGTACATGTGCACCAATTAAAGTAAACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR GCA 72 bp GTGTGTGTGTGTAAGTGTATGCCATGTATGTACGAGTaGCCTTGGAGACTAGAAGAGGGTGTCGGATCCCCA +
Preference number: 3 (lower is better)
Translates to: VCVCKCMPCMYE*PWRLEEGVGSP
Trigger: TGGGGATCCGACACCCTCTTCTAGTCTCCAAGGGCACTCGTACATACATGGCATACACTTACACACACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR GCA 72 bp GATGCTGCAGAGGACAGACTGGACGGTCACACAAAATaGAACATCCTCTTCCATGTCCAAGAGATCTGGGCA +
Preference number: 3 (lower is better)
Translates to: DAAEDRLDGHTK*NILFHVQEIWA
Trigger: TGCCCAGATCTCTTGGACATGGAAGAGGATGTTGCATTTTGTGTGACCGTCCAGTCTGTCCTCTGCAGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 72 bp ATATTGCATGCCGTGTTTTTGCCCGACACTCTGGTATaGGTCCCCAGGAGTGTGTCATCTGTCCCTGTGTAT +
Preference number: 3 (lower is better)
Translates to: ILHAVFLPDTLV*VPRSVSSVPVY
Trigger: ATACACAGGGACAGATGACACACTCCTGGGGACCCATACCAGAGTGTCGGGCAAAAACACGGCATGCAATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR TCA 72 bp CTCTTGCAGATGTGTTCCCAGCACCCACATGGAGATTaGTGGACAGACATTTGCAACTCCAGTTCTAGGGGA +
Preference number: 3 (lower is better)
Translates to: LLQMCSQHPHGD*WTDICNSSSRG
Trigger: TCCCCTAGAACTGGAGTTGCAAATGTCTGTCCATCAATCTCCATGTGGGTGCTGGGAACACATCTGCAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR TCA 72 bp CCTGTGAAACACTTACTTCCTGTGAAACACTTCCTGTaGAAGCGATGGGTGAAAGGATTGGCTACCCCAGGC +
Preference number: 3 (lower is better)
Translates to: PVKHLLPVKHFL*KRWVKGLATPG
Trigger: GCCTGGGGTAGCCAATCCTTTCACCCATCGCTTTCACAGGAAGTGTTTCACAGGAAGTAAGTGTTTCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR GCA 72 bp ACTCCAGTTCTAGGGGATCCGACGCCTTTCAACCACTaGAGGTACCATGCACACAGGGAAAACATTCATACA +
Preference number: 3 (lower is better)
Translates to: TPVLGDPTPFNH*RYHAHRENIHT
Trigger: TGTATGAATGTTTTCCCTGTGTGCATGGTACCTGCAGTGGTTGAAAGGCGTCGGATCCCCTAGAACTGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR GCA 72 bp GAAGTGGGACGTGTATCATCACAGTGGTTTATGCAATaGTGGGGACCAAACTTTGGCTCACTAGGCAAGGAC +
Preference number: 3 (lower is better)
Translates to: EVGRVSSQWFMQ*WGPNFGSLGKD
Trigger: GTCCTTGCCTAGTGAGCCAAAGTTTGGTCCCCAGCATTGCATAAACCACTGTGATGATACACGTCCCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 72 bp CTAGCTGCTCTTGCAGATGTGTTCCCAGCACCCACATaGAGATTGATGGACAGACATTTGCAACTCCAGTTC +
Preference number: 3 (lower is better)
Translates to: LAALADVFPAPT*RLMDRHLQLQF
Trigger: GAACTGGAGTTGCAAATGTCTGTCCATCAATCTCCATGTGGGTGCTGGGAACACATCTGCAAGAGCAGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 72 bp GTGGGACGTGTATCATCACAGTGGTTTATGCAATGCTaGGGACCAAACTTTGGCTCACTAGGCAAGGACTCT +
Preference number: 3 (lower is better)
Translates to: VGRVSSQWFMQC*GPNFGSLGKDS
Trigger: AGAGTCCTTGCCTAGTGAGCCAAAGTTTGGTCCCCAGCATTGCATAAACCACTGTGATGATACACGTCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 72 bp TGTAGTGTAAATGAGACTGCTGCATCCCAGCATCCTTaGGTGCTTAACTGGGAGAGGAAGAGACCCAAGAGA +
Preference number: 3 (lower is better)
Translates to: CSVNETAASQHP*VLNWERKRPKR
Trigger: TCTCTTGGGTCTCTTCCTCTCCCAGTTAAGCACCCAAGGATGCTGGGATGCAGCAGTCTCATTTACACTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 72 bp TGCCTTTGGTTTTGTAGCACCCGGGGCAGAGTGGTTTaGCATTGCTACATCGATGGCATTGTTGTTTCTGTG +
Preference number: 3 (lower is better)
Translates to: CLWFCSTRGRVV*HCYIDGIVVSV
Trigger: CACAGAAACAACAATGCCATCGATGTAGCAATGCCAAACCACTCTGCCCCGGGTGCTACAAAACCAAAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 72 bp CTCTCTGCCTTTGGTTTTGTAGCACCCGGGGCAGAGTaGTTTGGCATTGCTACATCGATGGCATTGTTGTTT +
Preference number: 3 (lower is better)
Translates to: LSAFGFVAPGAE*FGIATSMALLF
Trigger: AAACAACAATGCCATCGATGTAGCAATGCCAAACCACTCTGCCCCGGGTGCTACAAAACCAAAGGCAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CAA 90 bp CGCTCATTGGCCCATGTCCTCAGCCTTCCCAAAGGGCATTTTAAAAGATGTGCGCATTTTCTTTCCATGTaGGCATGTCTCTGTCCACAG +
Preference number: 3 (lower is better)
Translates to: RSLAHVLSLPKGHFKRCAHFLSM*ACLCPQ
Trigger: CTGTGGACAGAGACATGCCAACATGGAAAGAAAATG...CGCACATCTTTTAAAATGCCCTTTGGGAAGGCTGAGGACATGGGCCAATGAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CAA 90 bp AGCTGCTCTTGCAGATGTGTTCCCAGCACCCACATGGAGATTGATGGACAGACAATCCCGCTGCAATCTTaGGCAGTATTTAAAGAGGGT +
Preference number: 3 (lower is better)
Translates to: SCSCRCVPSTHMEIDGQTIPLQS*AVFKEG
Trigger: ACCCTCTTTAAATACTGCCAAAGATTGCAGCGGGAT...TGTCTGTCCATCAATCTCCATGTGGGTGCTGGGAACACATCTGCAAGAGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CAA 90 bp GTAAGTTCCCAGAGGGATGCTGCAGAGGACAGACTGGACGGTCACACAAAATGCACATGTCCAAAGACATaGATATTTTGGGATCCCGCT +
Preference number: 3 (lower is better)
Translates to: VSSQRDAAEDRLDGHTKCTCPKT*IFWDPA
Trigger: AGCGGGATCCCAAAATATCAATGTCTTTGGACATGT...GCATTTTGTGTGACCGTCCAGTCTGTCCTCTGCAGCATCCCTCTGGGAACTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CAA 90 bp CGCTCATTGGCCCATGTCCTCAGCCTTCCCAAAGGGCATTTTAAAAGATGTGCGACTGAGCACTATTCTTaGTCAATGCCACTCCCAAGA +
Preference number: 3 (lower is better)
Translates to: RSLAHVLSLPKGHFKRCATEHYS*SMPLPR
Trigger: TCTTGGGAGTGGCATTGACAAAGAATAGTGCTCAGT...CGCACATCTTTTAAAATGCCCTTTGGGAAGGCTGAGGACATGGGCCAATGAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CAA 90 bp TCCACTGATGCTGAGACTTCAATAGCCCCAGCACTCGGCCCAGCATCTTGGCTTCGTGTGTGTTTGTTGTaGTTGTTGTTGCACATGTAT +
Preference number: 3 (lower is better)
Translates to: STDAETSIAPALGPASWLRVCLL*LLLHMY
Trigger: ATACATGTGCAACAACAACAACAACAAACACACACG...AAGCCAAGATGCTGGGCCGAGTGCTGGGGCTATTGAAGTCTCAGCATCAGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR GCA 72 bp TGGTTTTGTAGCACCCGGGGCAGAGTGGTTTGGCATTaGTACATCGATGGCATTGTTGTTTCTGTGTGTACA +
Preference number: 3 (lower is better)
Translates to: WFCSTRGRVVWH*YIDGIVVSVCT
Trigger: TGTACACACAGAAACAACAATGCCATCGATGTAGCAATGCCAAACCACTCTGCCCCGGGTGCTACAAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 72 bp CTACATCGATGGCATTGTTGTTTCTGTGTGTACACGTaGCAACACGAAGCAGATGTTTGCTGCCAGCTCAGA +
Preference number: 3 (lower is better)
Translates to: LHRWHCCFCVYT*QHEADVCCQLR
Trigger: TCTGAGCTGGCAGCAAACATCTGCTTCGTGTTGCCACGTGTACACACAGAAACAACAATGCCATCGATGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CAA 90 bp GGACGGTCACACAAAATGCAACATCCTCTTCCATGTCCAAGAGATCTGGGCAGTGAGAAAGAGTCTCAGTaGAACCCAGAGTTCATCCAT +
Preference number: 3 (lower is better)
Translates to: GRSHKMQHPLPCPRDLGSEKESQ*NPEFIH
Trigger: ATGGATGAACTCTGGGTTCAACTGAGACTCTTTCTC...ACTGCCCAGATCTCTTGGACATGGAAGAGGATGTTGCATTTTGTGTGACCGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CAA 90 bp GGTGACAGTCACGGAGCAGCACACATGGCTTGCATGACATTCTGTTTTCTTTTTAAAAACCTTGCCAATTaGGCTATCTGGCTGGCCAGG +
Preference number: 3 (lower is better)
Translates to: GDSHGAAHMACMTFCFLFKNLAN*AIWLAR
Trigger: CCTGGCCAGCCAGATAGCCAAATTGGCAAGGTTTTT...AAAAAGAAAACAGAATGTCATGCAAGCCATGTGTGCTGCTCCGTGACTGTCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CAA 90 bp GTGTGTGTGTGTGTGTGTAAGTGTATGCCATGTATGTACGAGTGCCCTTGGAGATGTTTAGGTCAAAGGTaGTCCCTCAGGTATCTTCCT +
Preference number: 3 (lower is better)
Translates to: VCVCVCKCMPCMYECPWRCLGQR*SLRYLP
Trigger: AGGAAGATACCTGAGGGACAACCTTTGACCTAAACA...TCTCCAAGGGCACTCGTACATACATGGCATACACTTACACACACACACACACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR GCA 72 bp TTCCCAAAGGCCGAACTGAGCACTATTCTTTGTCAATaGCACTCCCAAGACACTCTCTTCTCCTACAAACCA +
Preference number: 3 (lower is better)
Translates to: FPKAELSTILCQ*HSQDTLFSYKP
Trigger: TGGTTTGTAGGAGAAGAGAGTGTCTTGGGAGTGGCATTGACAAAGAATAGTGCTCAGTTCGGCCTTTGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CAA 90 bp CTTTGCTCAAAACCAAATGAGATCTGCTTAACTGCCTTACATAGGAGAGGCCAGACCCCATGTGGGTACTaGAAACTTAGCTCAAGAGCA +
Preference number: 3 (lower is better)
Translates to: LCSKPNEICLTALHRRGQTPCGY*KLSSRA
Trigger: TGCTCTTGAGCTAAGTTTCAAGTACCCACATGGGGT...CTGGCCTCTCCTATGTAAGGCAGTTAAGCAGATCTCATTTGGTTTTGAGCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CAA 90 bp CTTTGCTCAAAACCAAATGAGATCTGCTTAACTGCCTTACATAGGAGAGGCCAGTTTAAGAGGCACAGGTaGGACATCCTAGCACAGCTT +
Preference number: 3 (lower is better)
Translates to: LCSKPNEICLTALHRRGQFKRHR*DILAQL
Trigger: AAGCTGTGCTAGGATGTCCAACCTGTGCCTCTTAAA...CTGGCCTCTCCTATGTAAGGCAGTTAAGCAGATCTCATTTGGTTTTGAGCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR GCA 72 bp AGACATGAGCCTCCATCACTGTATAGTGCCTTCGTCTaGCAAGTCACAGAGAAAACATACCCTTTCTCTTTC +
Preference number: 3 (lower is better)
Translates to: RHEPPSLYSAFV*QVTEKTYPFSF
Trigger: GAAAGAGAAAGGGTATGTTTTCTCTGTGACTTGGCAGACGAAGGCACTATACAGTGATGGAGGCTCATGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 72 bp GTTTGTAATGTACGGAACTCAAGTTCTGGCATACATTaGAAAGCTAGGGCTGGCATTTCCCAATGCTCCATC +
Preference number: 3 (lower is better)
Translates to: VCNVRNSSSGIH*KARAGISQCSI
Trigger: GATGGAGCATTGGGAAATGCCAGCCCTAGCTTTCCAATGTATGCCAGAACTTGAGTTCCGTACATTACAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CAA 90 bp GGACGGTCACACAAAATGCAACATCCTCTTCCATGTCCAAGAGATCTGGGCAGTCTTCCAAAGTTGATGTaGAAAGTTTTCCTCAATCAC +
Preference number: 3 (lower is better)
Translates to: GRSHKMQHPLPCPRDLGSLPKLM*KVFLNH
Trigger: GTGATTGAGGAAAACTTTCAACATCAACTTTGGAAG...ACTGCCCAGATCTCTTGGACATGGAAGAGGATGTTGCATTTTGTGTGACCGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR TCA 72 bp TGGGCCACATTATACAGTAGTATCCTTTTGCTCTCCTaGGCCTTTTTCAACAGAAACAGTGACAGTGAACCG +
Preference number: 3 (lower is better)
Translates to: WATLYSSILLLS*AFFNRNSDSEP
Trigger: CGGTTCACTGTCACTGTTTCTGTTGAAAAAGGCTCAGGAGAGCAAAAGGATACTACTGTATAATGTGGCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 72 bp AGCAAGTGGTGTAGACAGCAATATCACGGCTTCAAATaGGAGGGAAATTATAAAGCAGGGACAATAGGGTTG +
Preference number: 3 (lower is better)
Translates to: SKWCRQQYHGFK*EGNYKAGTIGL
Trigger: CAACCCTATTGTCCCTGCTTTATAATTTCCCTCCCATTTGAAGCCGTGATATTGCTGTCTACACCACTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CAA 90 bp TACATCGATGGCATTGTTGTTTCTGTGTGTACACGTGGCAACACGAAGCAGATGGAAAATCACCTTCTTTaGCGTTCCTCTTACTATCTC +
Preference number: 3 (lower is better)
Translates to: YIDGIVVSVCTRGNTKQMENHLL*RSSYYL
Trigger: GAGATAGTAAGAGGAACGCAAAAGAAGGTGATTTTC...CATCTGCTTCGTGTTGCCACGTGTACACACAGAAACAACAATGCCATCGATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CAA 90 bp TTCCATGTCCAAGAGATCTGGGCAGTTCCATCATTTCATTTCCAGTTGTATCACACATCGATGGCATTGTaGTTTCTGTGTGTACACGTG +
Preference number: 3 (lower is better)
Translates to: FHVQEIWAVPSFHFQLYHTSMAL*FLCVHV
Trigger: CACGTGTACACACAGAAACAACAATGCCATCGATGT...GTGATACAACTGGAAATGAAATGATGGAACTGCCCAGATCTCTTGGACATGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR-3UTR CAA 90 bp AGTTCCATCATTTCATTTCCAGTTGTATCACTGACCACTCCAGGGTCTTCAGTCAATCCTTGGCTTTCTTaGTACAACACAGATCCAAGT +
Preference number: 3 (lower is better)
Translates to: SSIISFPVVSLTTPGSSVNPWLS*YNTDPS
Trigger: ACTTGGATCTGTGTTGTACAAAGAAAGCCAAGGATT...GACTGAAGACCCTGGAGTGGTCAGTGATACAACTGGAAATGAAATGATGGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR GCA 72 bp CATATACCTGGGCCACATTATACAGTAGTATCCTTTTaGTCTCCTGAGCCTTTTTCAACAGAAACAGTGACA +
Preference number: 3 (lower is better)
Translates to: HIPGPHYTVVSF*SPEPFSTETVT
Trigger: TGTCACTGTTTCTGTTGAAAAAGGCTCAGGAGAGCAAAAGGATACTACTGTATAATGTGGCCCAGGTATATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 72 bp ACAAAATGCAACATCCTCTTCCATGTCCAAGAGATCTaGGCAGTTCCATCATTTCATTTCCAGTTGTATCAC +
Preference number: 3 (lower is better)
Translates to: TKCNILFHVQEI*AVPSFHFQLYH
Trigger: GTGATACAACTGGAAATGAAATGATGGAACTGCCCAGATCTCTTGGACATGGAAGAGGATGTTGCATTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR TCA 72 bp GAGTTAATTTCCGGACATCTTTCAGTACTTCTCTGCTaGTTTCACGATCCTATTATAATTAGAAACGCTCAC +
Preference number: 3 (lower is better)
Translates to: ELISGHLSVLLC*FHDPIIIRNAH
Trigger: GTGAGCGTTTCTAATTATAATAGGATCGTGAAATCAGCAGAGAAGTACTGAAAGATGTCCGGAAATTAACTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR GCA 72 bp AAATCACCTTCTTTTGCGTTCCTCTTACTATCTCTGTaGTATACAGCCAGTATACATTCTTCCTTTCTGTTT +
Preference number: 3 (lower is better)
Translates to: KSPSFAFLLLSL*YTASIHSSFLF
Trigger: AAACAGAAAGGAAGAATGTATACTGGCTGTATAGCACAGAGATAGTAAGAGGAACGCAAAAGAAGGTGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 72 bp AAAGACATTGATATTTTGGGATCCCGCTGCAATCTTTaGCAGTATTTAAAGAGGGTGTCATTTTCTTTCCAT +
Preference number: 3 (lower is better)
Translates to: KDIDILGSRCNL*QYLKRVSFSFH
Trigger: ATGGAAAGAAAATGACACCCTCTTTAAATACTGCCAAAGATTGCAGCGGGATCCCAAAATATCAATGTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CCA 72 bp AATAAGCTGGTTTGTACTGTAGCTGAGAATAATCCTTaGCTTTCTTTGTACAACACAGATCCAAGTCATCTT +
Preference number: 3 (lower is better)
Translates to: NKLVCTVAENNP*LSLYNTDPSHL
Trigger: AAGATGACTTGGATCTGTGTTGTACAAAGAAAGCCAAGGATTATTCTCAGCTACAGTACAAACCAGCTTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CAA 72 bp GAAGTGAGAGCTAAACCACGTGTGGTGGCCCAGCACTaGGAAGGCAGAAGCAGGCGATCGGAAATTCTGGGC +
Preference number: 4 (lower is better)
Translates to: EVRAKPRVVAQH*EGRSRRSEILG
Trigger: GCCCAGAATTTCCGATCGCCTGCTTCTGCCTTCCAAGTGCTGGGCCACCACACGTGGTTTAGCTCTCACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS-3UTR CCA 90 bp CGGAAGGTGAATTCAGTGAACACTTACAAGCACAGCTGTGTTCTGGAGCTGCATTCCAGCGTGGGGCTCTaGGGCCTCTGTTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: RKVNSVNTYKHSCVLELHSSVGL*GLCSRK
Trigger: CTTCCTGGAACAGAGGCCCCAGAGCCCCACGCTGGA...ATGCAGCTCCAGAACACAGCTGTGCTTGTAAGTGTTCACTGAATTCACCTTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS-3UTR CCA 90 bp CCAGGAGTGTGTCATCTGTCCCTGTGTATACGGCTGTCCAGTGTGACTTTGAGTCAGAGCTCCATCAGTTaGCCCACAGTCCTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PGVCHLSLCIRLSSVTLSQSSIS*PTVLWL
Trigger: CAGCCAGAGGACTGTGGGCCAACTGATGGAGCTCTG...ACTCAAAGTCACACTGGACAGCCGTATACACAGGGACAGATGACACACTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CAA 72 bp ACATGCTGCCACGTCTGGCTATTATGTGTGCGCTCATaGGCCCATGTCCTCAGCCTTCCCAAAGGGCATTTT +
Preference number: 4 (lower is better)
Translates to: TCCHVWLLCVRS*AHVLSLPKGHF
Trigger: AAAATGCCCTTTGGGAAGGCTGAGGACATGGGCCAATGAGCGCACACATAATAGCCAGACGTGGCAGCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS-3UTR TCA 90 bp CGCTCATTGGCCCATGTCCTCAGCCTTCCCAAAGGGCATTTTAAAAGATGTGCGGTATCTAGCAAGTCCTaGTCGTTGAGCAAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: RSLAHVLSLPKGHFKRCAVSSKS*SLSKSL
Trigger: CAGCGACTTGCTCAACGATCAGGACTTGCTAGATAC...CGCACATCTTTTAAAATGCCCTTTGGGAAGGCTGAGGACATGGGCCAATGAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS-3UTR CCA 90 bp CCTCCATCACTGTATAGTGCCTTCGTCTGCCAAGTCACAGAGAAAACATACCCTATAAGAACTCCAGCGTaGGGCTCTGGGGCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: PPSLYSAFVCQVTEKTYPIRTPA*GSGASV
Trigger: AACAGAGGCCCCAGAGCCCCACGCTGGAGTTCTTAT...AGGGTATGTTTTCTCTGTGACTTGGCAGACGAAGGCACTATACAGTGATGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CAA 72 bp GGGGCAGAGTGGTTTGGCATTGCTACATCGATGGCATaGTTGTTTCTGTGTGTACACGTGGCAACACGAAGC +
Preference number: 4 (lower is better)
Translates to: GAEWFGIATSMA*LFLCVHVATRS
Trigger: GCTTCGTGTTGCCACGTGTACACACAGAAACAACAATGCCATCGATGTAGCAATGCCAAACCACTCTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS-3UTR TCA 90 bp TTTAAAGAGGGTGTCATTTTCTTTCCATGTTGGCATGTCTCTGTCCACAGGCTTGGCTCCTTTGCCATGTaGTCTGAGCGCAGAGGGTCG +
Preference number: 4 (lower is better)
Translates to: FKEGVIFFPCWHVSVHRLGSFAM*SERRGS
Trigger: CGACCCTCTGCGCTCAGATCACATGGCAAAGGAGCC...AAGCCTGTGGACAGAGACATGCCAACATGGAAAGAAAATGACACCCTCTTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS-3UTR CCA 90 bp CCTCCATCACTGTATAGTGCCTTCGTCTGCCAAGTCACAGAGAAAACATACCCTGGCCGGTGTCTTGAATaGGATACTTGTCTGACATGG +
Preference number: 4 (lower is better)
Translates to: PPSLYSAFVCQVTEKTYPGRCLE*DTCLTW
Trigger: CCATGTCAGACAAGTATCCCATTCAAGACACCGGCC...AGGGTATGTTTTCTCTGTGACTTGGCAGACGAAGGCACTATACAGTGATGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS-3UTR CCA 90 bp GCTGCATCCCAGCATCCTTGGGTGCTTAACTGGGAGAGGAAGAGACCCAAGAGAATCTTTGGTGCTGTCTaGAAAGTCATTTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: AASQHPWVLNWERKRPKRIFGAV*KVIFFS
Trigger: GGAGAAGAAAATGACTTTCCAGACAGCACCAAAGAT...TCTCTTGGGTCTCTTCCTCTCCCAGTTAAGCACCCAAGGATGCTGGGATGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS-3UTR CCA 90 bp AGCTGCTCTTGCAGATGTGTTCCCAGCACCCACATGGAGATTGATGGACAGACACTGAAAGGGGATCTTTaGTGCTGTCTGGAAAGTCAT +
Preference number: 4 (lower is better)
Translates to: SCSCRCVPSTHMEIDGQTLKGDL*CCLESH
Trigger: ATGACTTTCCAGACAGCACCAAAGATCCCCTTTCAG...TGTCTGTCCATCAATCTCCATGTGGGTGCTGGGAACACATCTGCAAGAGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS-3UTR CCA 90 bp TACATCGATGGCATTGTTGTTTCTGTGTGTACACGTGGCAACACGAAGCAGATGCCGTCCTTACAGGGCTaGTTTCTGCTGACACCTGAA +
Preference number: 4 (lower is better)
Translates to: YIDGIVVSVCTRGNTKQMPSLQG*FLLTPE
Trigger: TTCAGGTGTCAGCAGAAACCAGCCCTGTAAGGACGG...CATCTGCTTCGTGTTGCCACGTGTACACACAGAAACAACAATGCCATCGATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CAA 72 bp GCAGAGTGGTTTGGCATTGCTACATCGATGGCATTGTaGTTTCTGTGTGTACACGTGGCAACACGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: AEWFGIATSMAL*FLCVHVATRSR
Trigger: TCTGCTTCGTGTTGCCACGTGTACACACAGAAACAACAATGCCATCGATGTAGCAATGCCAAACCACTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CAA 72 bp TTCAATAGCCCCAGCACTCGGCCCAGCATCTTGGCTTaGATTCTCTCTAAACACAGCAAAGCTAAGATTCCC +
Preference number: 4 (lower is better)
Translates to: FNSPSTRPSILA*ILSKHSKAKIP
Trigger: GGGAATCTTAGCTTTGCTGTGTTTAGAGAGAATCAAAGCCAAGATGCTGGGCCGAGTGCTGGGGCTATTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS-3UTR TCA 90 bp GGTGACAGTCACGGAGCAGCACACATGGCTTGCATGACATTCTGTTTTCTTTTTGTTTCTGCTGACACCTaGAAGGGGATCTTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: GDSHGAAHMACMTFCFLFVSADT*KGIFGA
Trigger: AGCACCAAAGATCCCCTTTCAGGTGTCAGCAGAAAC...AAAAAGAAAACAGAATGTCATGCAAGCCATGTGTGCTGCTCCGTGACTGTCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS-3UTR TCA 90 bp CTTTGCTCAAAACCAAATGAGATCTGCTTAACTGCCTTACATAGGAGAGGCCAGAGGGCTGGTTTCTGCTaGCACCTGAAAGGGGATCTT +
Preference number: 4 (lower is better)
Translates to: LCSKPNEICLTALHRRGQRAGFC*HLKGDL
Trigger: AAGATCCCCTTTCAGGTGTCAGCAGAAACCAGCCCT...CTGGCCTCTCCTATGTAAGGCAGTTAAGCAGATCTCATTTGGTTTTGAGCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS-3UTR GCA 90 bp CTTTGCTCAAAACCAAATGAGATCTGCTTAACTGCCTTACATAGGAGAGGCCAGTGGCAAAGGATAAAGTaGTGGGGTCCGTGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LCSKPNEICLTALHRRGQWQRIK*WGPCPP
Trigger: TGGAGGACACGGACCCCAGCACTTTATCCTTTGCCA...CTGGCCTCTCCTATGTAAGGCAGTTAAGCAGATCTCATTTGGTTTTGAGCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS-3UTR CCA 90 bp CCTCCATCACTGTATAGTGCCTTCGTCTGCCAAGTCACAGAGAAAACATACCCTCACGGTTGGGTGACATaGATCCAGCTTTATCCTGAT +
Preference number: 4 (lower is better)
Translates to: PPSLYSAFVCQVTEKTYPHGWVT*IQLYPD
Trigger: ATCAGGATAAAGCTGGATCCATGTCACCCAACCGTG...AGGGTATGTTTTCTCTGTGACTTGGCAGACGAAGGCACTATACAGTGATGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS-3UTR CCA 90 bp CGGAAGGTGAATTCAGTGAACACTTACAAGCACAGCTGTGTTCTGGAGCTGCATGCATGCCCCATTTGCTaGCAAAATTCCTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: RKVNSVNTYKHSCVLELHACPIC*QNSSSS
Trigger: AGAACTGGAGGAATTTTGCCAGCAAATGGGGCATGC...ATGCAGCTCCAGAACACAGCTGTGCTTGTAAGTGTTCACTGAATTCACCTTCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS-3UTR GCA 90 bp CGGAAGGTGAATTCAGTGAACACTTACAAGCACAGCTGTGTTCTGGAGCTGCATGTTCATCATAGGGCATaGCCCATTTGCTGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: RKVNSVNTYKHSCVLELHVHHRA*PICWQN
Trigger: ATTTTGCCAGCAAATGGGGCATGCCCTATGATGAAC...ATGCAGCTCCAGAACACAGCTGTGCTTGTAAGTGTTCACTGAATTCACCTTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CAA 72 bp TTTCTTTCCATGTTGGCATGTCTCTGTCCACAGGCTTaGGCCCTGTGTGACCTACCAAATATTCTTCCCCAA +
Preference number: 4 (lower is better)
Translates to: FLSMLACLCPQA*ALCDLPNILPQ
Trigger: TTGGGGAAGAATATTTGGTAGGTCACACAGGGCCAAAGCCTGTGGACAGAGACATGCCAACATGGAAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CAA 72 bp TCACTCTGCACATTGTTCATGGAGAAAGAGTCTCAGTaGAACCCAGAGTTCATCCATGTGCCAGGTGTAGCT +
Preference number: 4 (lower is better)
Translates to: SLCTLFMEKESQ*NPEFIHVPGVA
Trigger: AGCTACACCTGGCACATGGATGAACTCTGGGTTCAACTGAGACTCTTTCTCCATGAACAATGTGCAGAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS-3UTR GCA 90 bp TTTAAAGAGGGTGTCATTTTCTTTCCATGTTGGCATGTCTCTGTCCACAGGCTTAGGGCATGCCCCATTTaGTGGCAAAATTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: FKEGVIFFPCWHVSVHRLRACPI*WQNSSS
Trigger: ACTGGAGGAATTTTGCCAGCAAATGGGGCATGCCCT...AAGCCTGTGGACAGAGACATGCCAACATGGAAAGAAAATGACACCCTCTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS-3UTR TCA 90 bp CGCCTTTCAACCACTGCAGGTACCATGCACACAGGGAAAACATTCATACAAATAGATCCAGCTTTATCCTaGTCGTATCTAGCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: RLSTTAGTMHTGKTFIQIDPALS*SYLASP
Trigger: AGGACTTGCTAGATACGATCAGGATAAAGCTGGATC...TATTTGTATGAATGTTTTCCCTGTGTGCATGGTACCTGCAGTGGTTGAAAGGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CAA 72 bp CCCAAAGGGCATTTTAAAAGATGTGCGCGTGTGTGTTaGTTGTTGTTGTTGTTGCACATGTATGCAGATGTG +
Preference number: 4 (lower is better)
Translates to: PKGHFKRCARVC*LLLLLHMYADV
Trigger: CACATCTGCATACATGTGCAACAACAACAACAACAAACACACACGCGCACATCTTTTAAAATGCCCTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS-3UTR TCA 90 bp ATGTTGAAAGTTTTCCTCAATCACTCTGCACATTGTTCATGGAGAAAGAGTCTCTTCTTCACGGTTGGGTaGCATGGATCCAGCTTTATC +
Preference number: 4 (lower is better)
Translates to: MLKVFLNHSAHCSWRKSLFFTVG*HGSSFI
Trigger: GATAAAGCTGGATCCATGTCACCCAACCGTGAAGAA...GAGACTCTTTCTCCATGAACAATGTGCAGAGTGATTGAGGAAAACTTTCAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CAA 72 bp GTTGATGTTGAAAGTTTTCCTCAATCACTCTGCACATaGTTCATGGAGAAAGAGTCTCAGTTGAACCCAGAG +
Preference number: 4 (lower is better)
Translates to: VDVESFPQSLCT*FMEKESQLNPE
Trigger: CTCTGGGTTCAACTGAGACTCTTTCTCCATGAACAATGTGCAGAGTGATTGAGGAAAACTTTCAACATCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CAA 72 bp GGAGAGGCCAGAAGAGAAAAATCTGTTTGGCCTCTGTaGTTAATCCTGTCTTTAGAAGCACGTCTTTTTGTA +
Preference number: 4 (lower is better)
Translates to: GEARREKSVWPL*LILSLEARLFV
Trigger: TACAAAAAGACGTGCTTCTAAAGACAGGATTAACAACAGAGGCCAAACAGATTTTTCTCTTCTGGCCTCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS-3UTR CCA 90 bp TTTAAAGAGGGTGTCATTTTCTTTCCATGTTGGCATGTCTCTGTCCACAGGCTTGTCATCAGAATTTGGTaGACAGTTGGAATTGACTGT +
Preference number: 4 (lower is better)
Translates to: FKEGVIFFPCWHVSVHRLVIRIW*TVGIDC
Trigger: ACAGTCAATTCCAACTGTCCACCAAATTCTGATGAC...AAGCCTGTGGACAGAGACATGCCAACATGGAAAGAAAATGACACCCTCTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS-3UTR CCA 90 bp TTTAAAGAGGGTGTCATTTTCTTTCCATGTTGGCATGTCTCTGTCCACAGGCTTTTGGTCATCAGAATTTaGTGGACAGTTGGAATTGAC +
Preference number: 4 (lower is better)
Translates to: FKEGVIFFPCWHVSVHRLLVIRI*WTVGID
Trigger: GTCAATTCCAACTGTCCACCAAATTCTGATGACCAA...AAGCCTGTGGACAGAGACATGCCAACATGGAAAGAAAATGACACCCTCTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
3UTR CAA 72 bp TTTGTTTGTTTGTTTGTTTGTTTTAAGAGGCACAGGTaGGACATCCTAGCACAGCTTCAAGCCCTAACTAAT +
Preference number: 4 (lower is better)
Translates to: FVCLFVCFKRHR*DILAQLQALTN
Trigger: ATTAGTTAGGGCTTGAAGCTGTGCTAGGATGTCCAACCTGTGCCTCTTAAAACAAACAAACAAACAAACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS CCA 90 bp TCCTCATCCACCCACCTGCGCAGGATCTTCTCCACATCGGCCCTGTaGTACAGCCGGCAGAGCTCCATCAGTTGGCCCACAGTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: SSSTHLRRIFSTSAL*YSRQSSISWPTVLW
Trigger: CCAGAGGACTGTGGGCCAACTGATGGAGCTCTGCCGGCTGTACCACAGGGCCGATGTGGAGAAGATCCTGCGCAGGTGGGTGGATGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS CCA 90 bp CTGTGGTACAGCCGGCAGAGCTCCATCAGTTGGCCCACAGTCCTCTaGCTGTTTCGGAATAAGAACTCCAGCGTGGGGCTCTGGGGCCTC +
Preference number: 5 (lower is better)
Translates to: LWYSRQSSISWPTVL*LFRNKNSSVGLWGL
Trigger: GAGGCCCCAGAGCCCCACGCTGGAGTTCTTATTCCGAAACAGCCAGAGGACTGTGGGCCAACTGATGGAGCTCTGCCGGCTGTACCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS CCA 90 bp GAGCAGGAAGGGCAAGAGCAGCTGCCCTTCCCGTCCTTACAGGGCTaGTTTCTGCTGACACCTGAAAGGGGATCTTTGGTGCTGTCTGGA +
Preference number: 5 (lower is better)
Translates to: EQEGQEQLPFPSLQG*FLLTPERGSLVLSG
Trigger: TCCAGACAGCACCAAAGATCCCCTTTCAGGTGTCAGCAGAAACCAGCCCTGTAAGGACGGGAAGGGCAGCTGCTCTTGCCCTTCCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS-3UTR CAA 90 bp GCTGCATCCCAGCATCCTTGGGTGCTTAACTGGGAGAGGAAGAGACCCAAGAGAGCAGAGCTCCATCAGTaGGCCCACAGTCCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: AASQHPWVLNWERKRPKRAELHQ*AHSPLA
Trigger: AGCCAGAGGACTGTGGGCCAACTGATGGAGCTCTGC...TCTCTTGGGTCTCTTCCTCTCCCAGTTAAGCACCCAAGGATGCTGGGATGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS CCA 90 bp GTTGGCCCACAGTCCTCTGGCTGTTTCGGAATAAGAACTCCAGCGTaGGGCTCTGGGGCCTCTGTTCCAGGAAGCACAGTTCATCATAGG +
Preference number: 5 (lower is better)
Translates to: VGPQSSGCFGIRTPA*GSGASVPGSTVHHR
Trigger: CCTATGATGAACTGTGCTTCCTGGAACAGAGGCCCCAGAGCCCCACGCTGGAGTTCTTATTCCGAAACAGCCAGAGGACTGTGGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS GCA 90 bp GGCTCTGGGGCCTCTGTTCCAGGAAGCACAGTTCATCATAGGGCATaGCCCATTTGCTGGCAAAATTCCTCCAGTTCTTCACGGTTGGGT +
Preference number: 5 (lower is better)
Translates to: GSGASVPGSTVHHRA*PICWQNSSSSSRLG
Trigger: ACCCAACCGTGAAGAACTGGAGGAATTTTGCCAGCAAATGGGGCATGCCCTATGATGAACTGTGCTTCCTGGAACAGAGGCCCCAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS TCA 90 bp GCAGCTGCCCTTCCCGTCCTTACAGGGCTGGTTTCTGCTGACACCTaGAAGGGGATCTTTGGTGCTGTCTGGAAAGTCATTTTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: AAALPVLTGLVSADT*KGIFGAVWKVIFFS
Trigger: GGAGAAGAAAATGACTTTCCAGACAGCACCAAAGATCCCCTTTCAGGTGTCAGCAGAAACCAGCCCTGTAAGGACGGGAAGGGCAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS CCA 90 bp TGTCTTGAATGGGATACTTGTCTGACATGGCAAAGGATAAAGTGCTaGGGTCCGTGTCCTCCACTGGCTCCTTTGCCATGTGATCTGAGC +
Preference number: 5 (lower is better)
Translates to: CLEWDTCLTWQRIKC*GPCPPLAPLPCDLS
Trigger: GCTCAGATCACATGGCAAAGGAGCCAGTGGAGGACACGGACCCCAGCACTTTATCCTTTGCCATGTCAGACAAGTATCCCATTCAAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS-3UTR CAA 90 bp GCTGCATCCCAGCATCCTTGGGTGCTTAACTGGGAGAGGAAGAGACCCAAGAGAGGTGGACAGTTGGAATaGACTGTATCACACTCTTTA +
Preference number: 5 (lower is better)
Translates to: AASQHPWVLNWERKRPKRGGQLE*TVSHSL
Trigger: TAAAGAGTGTGATACAGTCAATTCCAACTGTCCACC...TCTCTTGGGTCTCTTCCTCTCCCAGTTAAGCACCCAAGGATGCTGGGATGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS-3UTR CAA 90 bp TCTGGCCAGGACTGCAGAGATTCTGTATGGGATTCTGTATGCGGACATGTCCAATTCTTCTCCCTGAGGTaGGTCATCAGAATTTGGTGG +
Preference number: 5 (lower is better)
Translates to: SGQDCRDSVWDSVCGHVQFFSLR*VIRIWW
Trigger: CCACCAAATTCTGATGACCAACCTCAGGGAGAAGAA...TTGGACATGTCCGCATACAGAATCCCATACAGAATCTCTGCAGTCCTGGCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS-3UTR CAA 90 bp CATTTCCCAATGCTCCATCATTCCTCTATCTCTGAGCCTCACCTTCTGAGTTCCCCTGAAAGGGGATCTTaGGTGCTGTCTGGAAAGTCA +
Preference number: 5 (lower is better)
Translates to: HFPMLHHSSISEPHLLSSPERGS*VLSGKS
Trigger: TGACTTTCCAGACAGCACCAAAGATCCCCTTTCAGG...GGAACTCAGAAGGTGAGGCTCAGAGATAGAGGAATGATGGAGCATTGGGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS TCA 90 bp GAAAGGGGATCTTTGGTGCTGTCTGGAAAGTCATTTTCTTCTCCCTaGGGTTGGTCATCAGAATTTGGTGGACAGTTGGAATTGACTGTA +
Preference number: 5 (lower is better)
Translates to: ERGSLVLSGKSFSSP*GWSSEFGGQLELTV
Trigger: TACAGTCAATTCCAACTGTCCACCAAATTCTGATGACCAACCTCAGGGAGAAGAAAATGACTTTCCAGACAGCACCAAAGATCCCCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS-3UTR CAA 90 bp TACATCGATGGCATTGTTGTTTCTGTGTGTACACGTGGCAACACGAAGCAGATGGAATTTGGTGGACAGTaGGAATTGACTGTATCACAC +
Preference number: 5 (lower is better)
Translates to: YIDGIVVSVCTRGNTKQMEFGGQ*ELTVSH
Trigger: GTGTGATACAGTCAATTCCAACTGTCCACCAAATTC...CATCTGCTTCGTGTTGCCACGTGTACACACAGAAACAACAATGCCATCGATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS CCA 90 bp TGGAAAGTCATTTTCTTCTCCCTGAGGTTGGTCATCAGAATTTGGTaGACAGTTGGAATTGACTGTATCACACTCTTTAGCTTTAGGGAG +
Preference number: 5 (lower is better)
Translates to: WKVIFFSLRLVIRIW*TVGIDCITLFSFRE
Trigger: CTCCCTAAAGCTAAAGAGTGTGATACAGTCAATTCCAACTGTCCACCAAATTCTGATGACCAACCTCAGGGAGAAGAAAATGACTTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS CCA 90 bp GTCTGGAAAGTCATTTTCTTCTCCCTGAGGTTGGTCATCAGAATTTaGTGGACAGTTGGAATTGACTGTATCACACTCTTTAGCTTTAGG +
Preference number: 5 (lower is better)
Translates to: VWKVIFFSLRLVIRI*WTVGIDCITLFSFR
Trigger: CCTAAAGCTAAAGAGTGTGATACAGTCAATTCCAACTGTCCACCAAATTCTGATGACCAACCTCAGGGAGAAGAAAATGACTTTCCAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS CCA 72 bp ACCCACCTGCGCAGGATCTTCTCCACATCGGCCCTGTaGTACAGCCGGCAGAGCTCCATCAGTTGGCCCACA +
Preference number: 6 (lower is better)
Translates to: THLRRIFSTSAL*YSRQSSISWPT
Trigger: TGTGGGCCAACTGATGGAGCTCTGCCGGCTGTACCACAGGGCCGATGTGGAGAAGATCCTGCGCAGGTGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS CCA 72 bp AGCCGGCAGAGCTCCATCAGTTGGCCCACAGTCCTCTaGCTGTTTCGGAATAAGAACTCCAGCGTGGGGCTC +
Preference number: 6 (lower is better)
Translates to: SRQSSISWPTVL*LFRNKNSSVGL
Trigger: GAGCCCCACGCTGGAGTTCTTATTCCGAAACAGCCAGAGGACTGTGGGCCAACTGATGGAGCTCTGCCGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS CCA 72 bp TCGGCCCTGTGGTACAGCCGGCAGAGCTCCATCAGTTaGCCCACAGTCCTCTGGCTGTTTCGGAATAAGAAC +
Preference number: 6 (lower is better)
Translates to: SALWYSRQSSIS*PTVLWLFRNKN
Trigger: GTTCTTATTCCGAAACAGCCAGAGGACTGTGGGCCAACTGATGGAGCTCTGCCGGCTGTACCACAGGGCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS CCA 72 bp CAGTCCTCTGGCTGTTTCGGAATAAGAACTCCAGCGTaGGGCTCTGGGGCCTCTGTTCCAGGAAGCACAGTT +
Preference number: 6 (lower is better)
Translates to: QSSGCFGIRTPA*GSGASVPGSTV
Trigger: AACTGTGCTTCCTGGAACAGAGGCCCCAGAGCCCCACGCTGGAGTTCTTATTCCGAAACAGCCAGAGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS TCA 72 bp AGCTGCCCTTCCCGTCCTTACAGGGCTGGTTTCTGCTaGCACCTGAAAGGGGATCTTTGGTGCTGTCTGGAA +
Preference number: 6 (lower is better)
Translates to: SCPSRPYRAGFC*HLKGDLWCCLE
Trigger: TTCCAGACAGCACCAAAGATCCCCTTTCAGGTGTCAGCAGAAACCAGCCCTGTAAGGACGGGAAGGGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS TCA 72 bp GGATCCAGCTTTATCCTGATCGTATCTAGCAAGTCCTaGTCGTTGAGCAAGTCGCTGATGGTGGGGGCCCGG +
Preference number: 6 (lower is better)
Translates to: GSSFILIVSSKS*SLSKSLMVGAR
Trigger: CCGGGCCCCCACCATCAGCGACTTGCTCAACGATCAGGACTTGCTAGATACGATCAGGATAAAGCTGGATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS GCA 72 bp GAATGGGATACTTGTCTGACATGGCAAAGGATAAAGTaGTGGGGTCCGTGTCCTCCACTGGCTCCTTTGCCA +
Preference number: 6 (lower is better)
Translates to: EWDTCLTWQRIK*WGPCPPLAPLP
Trigger: TGGCAAAGGAGCCAGTGGAGGACACGGACCCCAGCACTTTATCCTTTGCCATGTCAGACAAGTATCCCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS CCA 72 bp TGGGATACTTGTCTGACATGGCAAAGGATAAAGTGCTaGGGTCCGTGTCCTCCACTGGCTCCTTTGCCATGT +
Preference number: 6 (lower is better)
Translates to: WDTCLTWQRIKC*GPCPPLAPLPC
Trigger: ACATGGCAAAGGAGCCAGTGGAGGACACGGACCCCAGCACTTTATCCTTTGCCATGTCAGACAAGTATCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS TCA 72 bp CTTCCCGTCCTTACAGGGCTGGTTTCTGCTGACACCTaGAAGGGGATCTTTGGTGCTGTCTGGAAAGTCATT +
Preference number: 6 (lower is better)
Translates to: LPVLTGLVSADT*KGIFGAVWKVI
Trigger: AATGACTTTCCAGACAGCACCAAAGATCCCCTTTCAGGTGTCAGCAGAAACCAGCCCTGTAAGGACGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS GCA 72 bp CCAGGAAGCACAGTTCATCATAGGGCATGCCCCATTTaGTGGCAAAATTCCTCCAGTTCTTCACGGTTGGGT +
Preference number: 6 (lower is better)
Translates to: PGSTVHHRACPI*WQNSSSSSRLG
Trigger: ACCCAACCGTGAAGAACTGGAGGAATTTTGCCAGCAAATGGGGCATGCCCTATGATGAACTGTGCTTCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS CCA 72 bp GGAAGCACAGTTCATCATAGGGCATGCCCCATTTGCTaGCAAAATTCCTCCAGTTCTTCACGGTTGGGTGAC +
Preference number: 6 (lower is better)
Translates to: GSTVHHRACPIC*QNSSSSSRLGD
Trigger: GTCACCCAACCGTGAAGAACTGGAGGAATTTTGCCAGCAAATGGGGCATGCCCTATGATGAACTGTGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS CAA 72 bp GGTGCTGTCTGGAAAGTCATTTTCTTCTCCCTGAGGTaGGTCATCAGAATTTGGTGGACAGTTGGAATTGAC +
Preference number: 6 (lower is better)
Translates to: GAVWKVIFFSLR*VIRIWWTVGID
Trigger: GTCAATTCCAACTGTCCACCAAATTCTGATGACCAACCTCAGGGAGAAGAAAATGACTTTCCAGACAGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS CAA 90 bp GGGATCTTTGGTGCTGTCTGGAAAGTCATTTTCTTCTCCCTGAGGTaGGTCATCAGAATTTGGTGGACAGTTGGAATTGACTGTATCACA +
Preference number: 6 (lower is better)
Translates to: GIFGAVWKVIFFSLR*VIRIWWTVGIDCIT
Trigger: TGTGATACAGTCAATTCCAACTGTCCACCAAATTCTGATGACCAACCTCAGGGAGAAGAAAATGACTTTCCAGACAGCACCAAAGATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS TCA 72 bp TCTTTGGTGCTGTCTGGAAAGTCATTTTCTTCTCCCTaGGGTTGGTCATCAGAATTTGGTGGACAGTTGGAA +
Preference number: 6 (lower is better)
Translates to: SLVLSGKSFSSP*GWSSEFGGQLE
Trigger: TTCCAACTGTCCACCAAATTCTGATGACCAACCTCAGGGAGAAGAAAATGACTTTCCAGACAGCACCAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3
CDS CCA 72 bp ATTTTCTTCTCCCTGAGGTTGGTCATCAGAATTTGGTaGACAGTTGGAATTGACTGTATCACACTCTTTAGC +
Preference number: 6 (lower is better)
Translates to: IFFSLRLVIRIW*TVGIDCITLFS
Trigger: GCTAAAGAGTGTGATACAGTCAATTCCAACTGTCCACCAAATTCTGATGACCAACCTCAGGGAGAAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179308.3