Pregenerated sensors for EDAR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003227Ensembl transcript IDs: ENSMUST00000003312.5
Found 175 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGTGCCCAGGACCTCAGACCCCAGCTCTGTACTGCGTCTCGGGCTaGACCACCCCTCACTGGCTCAGGATGTTGTGCCTGAACTCACTC | + |
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Preference number: 1 (lower is better) Translates to: QCPGPQTPALYCVSG*TTPHWLRMLCLNSL Trigger: GAGTGAGTTCAGGCACAACATCCTGAGCCAGTGAGGGGTGGTGCAGCCCGAGACGCAGTACAGAGCTGGGGTCTGAGGTCCTGGGCACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR CCA 90 bp | CAGACCCCAGCTCTGTACTGCGTCTCGGGCTGCACCACCCCTCACTaGCTCAGGATGTTGTGCCTGAACTCACTCGAGCCTCACCCAGGA | + |
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Preference number: 1 (lower is better) Translates to: QTPALYCVSGCTTPH*LRMLCLNSLEPHPG Trigger: TCCTGGGTGAGGCTCGAGTGAGTTCAGGCACAACATCCTGAGCCAGTGAGGGGTGGTGCAGCCCGAGACGCAGTACAGAGCTGGGGTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR TCA 90 bp | GCGTCTCGGGCTGCACCACCCCTCACTGGCTCAGGATGTTGTGCCTaGACTCACTCGAGCCTCACCCAGGAATCAGGCATGGTCAAACTC | + |
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Preference number: 1 (lower is better) Translates to: ASRAAPPLTGSGCCA*THSSLTQESGMVKL Trigger: GAGTTTGACCATGCCTGATTCCTGGGTGAGGCTCGAGTGAGTTCAGGCACAACATCCTGAGCCAGTGAGGGGTGGTGCAGCCCGAGACGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR GCA 90 bp | TACTGCGTCTCGGGCTGCACCACCCCTCACTGGCTCAGGATGTTGTaGCTGAACTCACTCGAGCCTCACCCAGGAATCAGGCATGGTCAA | + |
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Preference number: 1 (lower is better) Translates to: YCVSGCTTPHWLRML*LNSLEPHPGIRHGQ Trigger: TTGACCATGCCTGATTCCTGGGTGAGGCTCGAGTGAGTTCAGGCACAACATCCTGAGCCAGTGAGGGGTGGTGCAGCCCGAGACGCAGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR TCA 90 bp | GCTGTGGCTGCGAGTGGTGCTGGAGGCCAGATCTGCCCACACTTGTaGCTGGACAGACACACGCCTTGTATGTCAGTGACACATGGTGAG | + |
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Preference number: 1 (lower is better) Translates to: AVAASGAGGQICPHL*LDRHTPCMSVTHGE Trigger: CTCACCATGTGTCACTGACATACAAGGCGTGTGTCTGTCCAGTCACAAGTGTGGGCAGATCTGGCCTCCAGCACCACTCGCAGCCACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR CCA 90 bp | CCACACCGCTGGCTGCAGCTGCCCATTCTTCAGCACAATGACAGTTaGAGAAGAGCCTGCTGTCCTCGACCTGCTCACTCATCACGCATG | + |
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Preference number: 1 (lower is better) Translates to: PHRWLQLPILQHNDS*RRACCPRPAHSSRM Trigger: CATGCGTGATGAGTGAGCAGGTCGAGGACAGCAGGCTCTTCTCCAACTGTCATTGTGCTGAAGAATGGGCAGCTGCAGCCAGCGGTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR GCA 90 bp | CACACTGTATTTACCCCATGGAGGCTCCTCTGGCCTCTTCTCTTCTaGCTCCGTGTTCTTTCACTCACCCTTTCGCTCACTGGAGCCTCA | + |
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Preference number: 1 (lower is better) Translates to: HTVFTPWRLLWPLLF*LRVLSLTLSLTGAS Trigger: TGAGGCTCCAGTGAGCGAAAGGGTGAGTGAAAGAACACGGAGGCAGAAGAGAAGAGGCCAGAGGAGCCTCCATGGGGTAAATACAGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR TCA 90 bp | GCTTATACCATGGTGTGTGACTGCAAACACAGGTCGAGTTACCTCTaGAACCATAGGGCATGCCAGCAAACCATGCTCTGTCTGAGGCCA | + |
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Preference number: 1 (lower is better) Translates to: AYTMVCDCKHRSSYL*NHRACQQTMLCLRP Trigger: TGGCCTCAGACAGAGCATGGTTTGCTGGCATGCCCTATGGTTTCAGAGGTAACTCGACCTGTGTTTGCAGTCACACACCATGGTATAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR GCA 90 bp | CTGCAGCTGCCCATTCTTCAGCACAATGACAGTTGGAGAAGAGCCTaGTGTCCTCGACCTGCTCACTCATCACGCATGACATTTACAAGT | + |
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Preference number: 1 (lower is better) Translates to: LQLPILQHNDSWRRA*CPRPAHSSRMTFTS Trigger: ACTTGTAAATGTCATGCGTGATGAGTGAGCAGGTCGAGGACAGCAGGCTCTTCTCCAACTGTCATTGTGCTGAAGAATGGGCAGCTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR TCA 90 bp | GTTACCTCTGAAACCATAGGGCATGCCAGCAAACCATGCTCTGTCTaGGGCCATGAAGGATGTGGGATGCCTGTACTTTGTAACCGTTTT | + |
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Preference number: 1 (lower is better) Translates to: VTSETIGHASKPCSV*GHEGCGMPVLCNRF Trigger: AAAACGGTTACAAAGTACAGGCATCCCACATCCTTCATGGCCTCAGACAGAGCATGGTTTGCTGGCATGCCCTATGGTTTCAGAGGTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR GCA 90 bp | CCTTGGCTCCCATTTCCTGGCAGTTACAGGTGCAGTAAGAGAATATaGCAAGAGCAATGGCTGTTTATAAGCCCTGTAAACGCTCAGTCC | + |
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Preference number: 1 (lower is better) Translates to: PWLPFPGSYRCSKRI*QEQWLFISPVNAQS Trigger: GGACTGAGCGTTTACAGGGCTTATAAACAGCCATTGCTCTTGGCATATTCTCTTACTGCACCTGTAACTGCCAGGAAATGGGAGCCAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR CCA 90 bp | TTTCCTGGCAGTTACAGGTGCAGTAAGAGAATATGCCAAGAGCAATaGCTGTTTATAAGCCCTGTAAACGCTCAGTCCTACAGTTGCCCT | + |
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Preference number: 1 (lower is better) Translates to: FPGSYRCSKRICQEQ*LFISPVNAQSYSCP Trigger: AGGGCAACTGTAGGACTGAGCGTTTACAGGGCTTATAAACAGCCATTGCTCTTGGCATATTCTCTTACTGCACCTGTAACTGCCAGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR GCA 90 bp | CCCTTCATTTGCCTAGGTGATGTTTTGGTAACACGGTCTATACCATaGTCCCATCTCTCACTAAGTGCCTCCTTAAAAGACAGGATCAGA | + |
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Preference number: 1 (lower is better) Translates to: PFICLGDVLVTRSIP*SHLSLSASLKDRIR Trigger: TCTGATCCTGTCTTTTAAGGAGGCACTTAGTGAGAGATGGGAGCATGGTATAGACCGTGTTACCAAAACATCACCTAGGCAAATGAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR GCA 90 bp | TTCAGTGGTGGGAAATGGCTTGATGGTTTTAAACACACCACTGATTaGTCTCCAAAGCCTTTGTTCAGTCATAGGCCTTGTAAAACAAAA | + |
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Preference number: 1 (lower is better) Translates to: FSGGKWLDGFKHTTD*SPKPLFSHRPCKTK Trigger: TTTTGTTTTACAAGGCCTATGACTGAACAAAGGCTTTGGAGAGCAATCAGTGGTGTGTTTAAAACCATCAAGCCATTTCCCACCACTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR CCA 90 bp | GATCATATTAAAAATTCAGGACCTAATTATGGTCCTCTCACAGTATaGTCTATATTCAGTGGTGGGAAATGGCTTGATGGTTTTAAACAC | + |
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Preference number: 1 (lower is better) Translates to: DHIKNSGPNYGPLTV*SIFSGGKWLDGFKH Trigger: GTGTTTAAAACCATCAAGCCATTTCCCACCACTGAATATAGACCATACTGTGAGAGGACCATAATTAGGTCCTGAATTTTTAATATGATC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR-3UTR TCA 90 bp | CCAGGACCTCAGACCCCAGCTCTGTACTGCGTCTCGGGCTGCACCACCCCTCACGGACGCACGTCCCTTTaGAGCAAGACAAGCCTGACA | + |
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Preference number: 2 (lower is better) Translates to: PGPQTPALYCVSGCTTPHGRTSL*SKTSLT Trigger: TGTCAGGCTTGTCTTGCTTCAAAGGGACGTGCGTCC...GTGAGGGGTGGTGCAGCCCGAGACGCAGTACAGAGCTGGGGTCTGAGGTCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR CAA 90 bp | CTGTACTGCGTCTCGGGCTGCACCACCCCTCACTGGCTCAGGATGTaGTGCCTGAACTCACTCGAGCCTCACCCAGGAATCAGGCATGGT | + |
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Preference number: 2 (lower is better) Translates to: LYCVSGCTTPHWLRM*CLNSLEPHPGIRHG Trigger: ACCATGCCTGATTCCTGGGTGAGGCTCGAGTGAGTTCAGGCACAACATCCTGAGCCAGTGAGGGGTGGTGCAGCCCGAGACGCAGTACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR-3UTR CCA 90 bp | GTGGCCACCCACACTGTATTTACCCCATGGAGGCTCCTCTGGCCTCTTCTCTTCCATTGGATCCCCAGCTaGTCCCAGGGAAGACAGTCC | + |
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Preference number: 2 (lower is better) Translates to: VATHTVFTPWRLLWPLLFHWIPS*SQGRQS Trigger: GGACTGTCTTCCCTGGGACCAGCTGGGGATCCAATG...GAAGAGAAGAGGCCAGAGGAGCCTCCATGGGGTAAATACAGTGTGGGTGGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR-3UTR CCA 90 bp | AGTCTCCAGACAAACATGGCAGCGTGGAGTTCCAGCATTGGTCAGCAAGAGTCATGCTGTGGCTGCGAGTaGTGCTGGAGGCCAGATCTG | + |
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Preference number: 2 (lower is better) Translates to: SLQTNMAAWSSSIGQQESCCGCE*CWRPDL Trigger: CAGATCTGGCCTCCAGCACCACTCGCAGCCACAGCA...TGACTCTTGCTGACCAATGCTGGAACTCCACGCTGCCATGTTTGTCTGGAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR-3UTR CCA 90 bp | AGACCAGGGGTAAGGGACACTGCAGGGTCTCAGGAATTAAAAGGACAATTAAGCCTGCAGTCAGCGCTCTaGGAGGGAGCCCAGCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: RPGVRDTAGSQELKGQLSLQSAL*EGAQQP Trigger: TGGCTGCTGGGCTCCCTCCCAGAGCGCTGACTGCAG...GCTTAATTGTCCTTTTAATTCCTGAGACCCTGCAGTGTCCCTTACCCCTGGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR-3UTR CCA 90 bp | AGTCTGGAGGAGACAGACACTTTGAATGACTCTCCCAGTGCCCAGGACCTCAGAGCCCACACTTGTGACTaGACAGACACACGCCTTGTA | + |
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Preference number: 2 (lower is better) Translates to: SLEETDTLNDSPSAQDLRAHTCD*TDTRLV Trigger: TACAAGGCGTGTGTCTGTCCAGTCACAAGTGTGGGC...TCTGAGGTCCTGGGCACTGGGAGAGTCATTCAAAGTGTCTGTCTCCTCCAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR-3UTR CCA 90 bp | AAGAGCCTGCTGTCCTCGACCTGCTCACTCATCACGCATGACATTTACAAGTCTCCATGGAGGCTCCTCTaGCCTCTTCTCTTCTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: KSLLSSTCSLITHDIYKSPWRLL*PLLFCL Trigger: GAGGCAGAAGAGAAGAGGCCAGAGGAGCCTCCATGG...AGACTTGTAAATGTCATGCGTGATGAGTGAGCAGGTCGAGGACAGCAGGCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR-3UTR TCA 90 bp | AGTCTCCAGACAAACATGGCAGCGTGGAGTTCCAGCATTGGTCAGCAAGAGTCAGTTGGCAAAGCACACTaGAGCCAACCAACCCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: SLQTNMAAWSSSIGQQESVGKAH*SQPTLP Trigger: TGGAAGGGTTGGTTGGCTTCAGTGTGCTTTGCCAAC...TGACTCTTGCTGACCAATGCTGGAACTCCACGCTGCCATGTTTGTCTGGAGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR-3UTR GCA 90 bp | TTGGCATTAACCCCCTGCCGGGGAAGTTTCCTTGGCTCCCATTTCCTGGCAGTTGCTCAGTCCTACAGTTaGCCTTATATGAGAATGGCG | + |
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Preference number: 2 (lower is better) Translates to: LALTPCRGSFLGSHFLAVAQSYS*PYMRMA Trigger: CGCCATTCTCATATAAGGGCAACTGTAGGACTGAGC...AACTGCCAGGAAATGGGAGCCAAGGAAACTTCCCCGGCAGGGGGTTAATGCCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR-3UTR TCA 90 bp | AAGAGCCTGCTGTCCTCGACCTGCTCACTCATCACGCATGACATTTACAAGTCTAGGAGACAGACACTTTaGATGACTCTCCCAGTGCCC | + |
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Preference number: 2 (lower is better) Translates to: KSLLSSTCSLITHDIYKSRRQTL*MTLPVP Trigger: GGGCACTGGGAGAGTCATTCAAAGTGTCTGTCTCCT...AGACTTGTAAATGTCATGCGTGATGAGTGAGCAGGTCGAGGACAGCAGGCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR CAA 90 bp | TACTTAGGGCAGCCTAAGGAATACAGTGACCCACCAGGAAATGCCTaGAGTTTTGGCAGTCTGATAGCATCACTCACAGCTGTCGGTCGT | + |
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Preference number: 2 (lower is better) Translates to: YLGQPKEYSDPPGNA*SFGSLIASLTAVGR Trigger: ACGACCGACAGCTGTGAGTGATGCTATCAGACTGCCAAAACTCAAGGCATTTCCTGGTGGGTCACTGTATTCCTTAGGCTGCCCTAAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR CAA 90 bp | CTGAGCAAGTCACCATTTCCTTCTCTAGATAGGACGCACGTCCCTTaGAAGCAAGACAAGCCTGACATTGTAACTGCTGTGGCTGCGAGT | + |
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Preference number: 2 (lower is better) Translates to: LSKSPFPSLDRTHVP*KQDKPDIVTAVAAS Trigger: ACTCGCAGCCACAGCAGTTACAATGTCAGGCTTGTCTTGCTTCAAAGGGACGTGCGTCCTATCTAGAGAAGGAAATGGTGACTTGCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR CAA 90 bp | TGGAGTTCCAGCATTGGTCAGCAAGAGTCACTGTGGTCTTGTTGGTaGGCAAAGCACACTGAAGCCAACCAACCCTTCCAGGATTTATTG | + |
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Preference number: 2 (lower is better) Translates to: WSSSIGQQESLWSCW*AKHTEANQPFQDLL Trigger: CAATAAATCCTGGAAGGGTTGGTTGGCTTCAGTGTGCTTTGCCAACCAACAAGACCACAGTGACTCTTGCTGACCAATGCTGGAACTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR-3UTR GCA 90 bp | CACTGCAGGGTCTCAGGAATTAAAAGGACAATTAAGCAGACATTTAACTTGCAATGTGGCTGCGAGTGGTaGTGGAGGCCAGATCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: HCRVSGIKRTIKQTFNLQCGCEW*WRPDLP Trigger: GGGCAGATCTGGCCTCCAGCACCACTCGCAGCCACA...TTGCAAGTTAAATGTCTGCTTAATTGTCCTTTTAATTCCTGAGACCCTGCAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR CAA 90 bp | TGGTTGGCAAAGCACACTGAAGCCAACCAACCCTTCCAGGATTTATaGCCATGTAAAGTAAATGACAAGGGACTGGCTCCCCTAAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: WLAKHTEANQPFQDL*PCKVNDKGLAPLKQ Trigger: CTGCTTTAGGGGAGCCAGTCCCTTGTCATTTACTTTACATGGCAATAAATCCTGGAAGGGTTGGTTGGCTTCAGTGTGCTTTGCCAACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR CAA 90 bp | ATAATAACAGTCTCCAGACAAACATGGCAGCGTGGAGTTCCAGCATaGGTCAGCAAGAGTCACTGTGGTCTTGTTGGTTGGCAAAGCACA | + |
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Preference number: 2 (lower is better) Translates to: IITVSRQTWQRGVPA*VSKSHCGLVGWQST Trigger: TGTGCTTTGCCAACCAACAAGACCACAGTGACTCTTGCTGACCAATGCTGGAACTCCACGCTGCCATGTTTGTCTGGAGACTGTTATTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR-3UTR GCA 90 bp | TTGGAGAAGAGCCTGCTGTCCTCGACCTGCTCACTCATCACGCATGACATTTACAAACACACCACTGATTaGTCTCCAAAGCCTTTGTTC | + |
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Preference number: 2 (lower is better) Translates to: LEKSLLSSTCSLITHDIYKHTTD*SPKPLF Trigger: GAACAAAGGCTTTGGAGAGCAATCAGTGGTGTGTTT...GTAAATGTCATGCGTGATGAGTGAGCAGGTCGAGGACAGCAGGCTCTTCTCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR-3UTR CCA 90 bp | GTTTATAAGCCCTGTAAACGCTCAGTCCTACAGTTGCCCTTATATGAGAATGGCCACCCTTTCGCTCACTaGAGCCTCAACATTCCTGAC | + |
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Preference number: 2 (lower is better) Translates to: VYKPCKRSVLQLPLYENGHPFAH*SLNIPD Trigger: GTCAGGAATGTTGAGGCTCCAGTGAGCGAAAGGGTG...GCCATTCTCATATAAGGGCAACTGTAGGACTGAGCGTTTACAGGGCTTATAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR-3UTR TCA 90 bp | ATACCATGGTGTGTGACTGCAAACACAGGTCGAGTTACCTCTGAAACCATAGGGCTTCATTTGCCTAGGTaGTGTTTTGGTAACACGGTC | + |
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Preference number: 2 (lower is better) Translates to: IPWCVTANTGRVTSETIGLHLPR*CFGNTV Trigger: GACCGTGTTACCAAAACATCACCTAGGCAAATGAAG...CCCTATGGTTTCAGAGGTAACTCGACCTGTGTTTGCAGTCACACACCATGGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR-3UTR TCA 90 bp | CTCAACATTCCTGACTACAGATGTGAAGACCAACCTCTCTCAGCTAAGAGAAGCTTATACCATGGTGTGTaGCTGCAAACACAGGTCGAG | + |
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Preference number: 2 (lower is better) Translates to: LNIPDYRCEDQPLSAKRSLYHGV*LQTQVE Trigger: CTCGACCTGTGTTTGCAGTCACACACCATGGTATAA...GCTTCTCTTAGCTGAGAGAGGTTGGTCTTCACATCTGTAGTCAGGAATGTTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR-3UTR TCA 90 bp | CTCAACATTCCTGACTACAGATGTGAAGACCAACCTCTCTCAGCTAAGAGAAGCGGCATGGTCAAACTCTaGGCAAGTCACCATTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: LNIPDYRCEDQPLSAKRSGMVKL*ASHHFL Trigger: AAGGAAATGGTGACTTGCTCAGAGTTTGACCATGCC...GCTTCTCTTAGCTGAGAGAGGTTGGTCTTCACATCTGTAGTCAGGAATGTTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR-3UTR CCA 90 bp | CACTGCAGGGTCTCAGGAATTAAAAGGACAATTAAGCAGACATTTAACTTGCAATGCACCACCCCTCACTaGCTCAGGATGTTGTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: HCRVSGIKRTIKQTFNLQCTTPH*LRMLCL Trigger: CAGGCACAACATCCTGAGCCAGTGAGGGGTGGTGCA...TTGCAAGTTAAATGTCTGCTTAATTGTCCTTTTAATTCCTGAGACCCTGCAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR-3UTR GCA 90 bp | CTCAACATTCCTGACTACAGATGTGAAGACCAACCTCTCTCAGCTAAGAGAAGCTCTTCCACTAGTGACTaGAAGGCTTATACCATGGTG | + |
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Preference number: 2 (lower is better) Translates to: LNIPDYRCEDQPLSAKRSSSTSD*KAYTMV Trigger: CACCATGGTATAAGCCTTGCAGTCACTAGTGGAAGA...GCTTCTCTTAGCTGAGAGAGGTTGGTCTTCACATCTGTAGTCAGGAATGTTGAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR-3UTR GCA 90 bp | TACAGGTGCAGTAAGAGAATATGCCAAGAGCAATGGCTGTTTATAAGCCCTGTAACCATGGTGTGTGACTaGAAACACAGGTCGAGTTAC | + |
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Preference number: 2 (lower is better) Translates to: YRCSKRICQEQWLFISPVTMVCD*KHRSSY Trigger: GTAACTCGACCTGTGTTTGCAGTCACACACCATGGT...TACAGGGCTTATAAACAGCCATTGCTCTTGGCATATTCTCTTACTGCACCTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR-3UTR CCA 90 bp | GGTTGGCAAAGCACACTGAAGCCAACCAACCCTTCCAGGATTTATTGCCATGTAATATGCCAAGAGCAATaGCTGTTTATAAGCCCTGTA | + |
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Preference number: 2 (lower is better) Translates to: GWQSTLKPTNPSRIYCHVICQEQ*LFISPV Trigger: TACAGGGCTTATAAACAGCCATTGCTCTTGGCATAT...TACATGGCAATAAATCCTGGAAGGGTTGGTTGGCTTCAGTGTGCTTTGCCAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR CAA 90 bp | ATGGTCCTCTCACAGTATGGTCTATATTCAGTGGTGGGAAATGGCTaGATGGTTTTAAACACACCACTGATTGCTCTCCAAAGCCTTTGT | + |
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Preference number: 2 (lower is better) Translates to: MVLSQYGLYSVVGNG*MVLNTPLIALQSLC Trigger: ACAAAGGCTTTGGAGAGCAATCAGTGGTGTGTTTAAAACCATCAAGCCATTTCCCACCACTGAATATAGACCATACTGTGAGAGGACCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR-3UTR TCA 90 bp | CACTGCAGGGTCTCAGGAATTAAAAGGACAATTAAGCAGACATTTAACTTGCAACCACTTTCAACCCCTTaGGACTCTATCACCCTTATA | + |
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Preference number: 2 (lower is better) Translates to: HCRVSGIKRTIKQTFNLQPLSTP*DSITLI Trigger: TATAAGGGTGATAGAGTCTCAAGGGGTTGAAAGTGG...TTGCAAGTTAAATGTCTGCTTAATTGTCCTTTTAATTCCTGAGACCCTGCAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR-3UTR GCA 90 bp | AACACACCACTGATTGCTCTCCAAAGCCTTTGTTCAGTCATAGGCCTTGTAAAATGCAGTAAGAGAATATaGCAAGAGCAATGGCTGTTT | + |
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Preference number: 2 (lower is better) Translates to: NTPLIALQSLCSVIGLVKCSKRI*QEQWLF Trigger: AAACAGCCATTGCTCTTGGCATATTCTCTTACTGCA...TTTTACAAGGCCTATGACTGAACAAAGGCTTTGGAGAGCAATCAGTGGTGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR-3UTR CCA 90 bp | CACTGCAGGGTCTCAGGAATTAAAAGGACAATTAAGCAGACATTTAACTTGCAATTCAGTGGTGGGAAATaGCTTGATGGTTTTAAACAC | + |
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Preference number: 2 (lower is better) Translates to: HCRVSGIKRTIKQTFNLQFSGGK*LDGFKH Trigger: GTGTTTAAAACCATCAAGCCATTTCCCACCACTGAA...TTGCAAGTTAAATGTCTGCTTAATTGTCCTTTTAATTCCTGAGACCCTGCAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR GCA 72 bp | GGACCTCAGACCCCAGCTCTGTACTGCGTCTCGGGCTaGACCACCCCTCACTGGCTCAGGATGTTGTGCCTG | + |
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Preference number: 3 (lower is better) Translates to: GPQTPALYCVSG*TTPHWLRMLCL Trigger: CAGGCACAACATCCTGAGCCAGTGAGGGGTGGTGCAGCCCGAGACGCAGTACAGAGCTGGGGTCTGAGGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR GCA 72 bp | GGAGGGAGCCCAGCAGCCAGCTTGGCATTAACCCCCTaGCGGGGAAGTTTCCTTGGCTCCCATTTCCTGGCA | + |
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Preference number: 3 (lower is better) Translates to: GGSPAASLALTP*RGSFLGSHFLA Trigger: TGCCAGGAAATGGGAGCCAAGGAAACTTCCCCGGCAGGGGGTTAATGCCAAGCTGGCTGCTGGGCTCCCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| 3UTR GCA 72 bp | TCGGGCTGCACCACCCCTCACTGGCTCAGGATGTTGTaGCTGAACTCACTCGAGCCTCACCCAGGAATCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SGCTTPHWLRML*LNSLEPHPGIR Trigger: CCTGATTCCTGGGTGAGGCTCGAGTGAGTTCAGGCACAACATCCTGAGCCAGTGAGGGGTGGTGCAGCCCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| 3UTR CCA 72 bp | GCTCTGTACTGCGTCTCGGGCTGCACCACCCCTCACTaGCTCAGGATGTTGTGCCTGAACTCACTCGAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: ALYCVSGCTTPH*LRMLCLNSLEP Trigger: AGGCTCGAGTGAGTTCAGGCACAACATCCTGAGCCAGTGAGGGGTGGTGCAGCCCGAGACGCAGTACAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| 3UTR TCA 72 bp | GCTGCACCACCCCTCACTGGCTCAGGATGTTGTGCCTaGACTCACTCGAGCCTCACCCAGGAATCAGGCATG | + |
|
Preference number: 3 (lower is better) Translates to: AAPPLTGSGCCA*THSSLTQESGM Trigger: CATGCCTGATTCCTGGGTGAGGCTCGAGTGAGTTCAGGCACAACATCCTGAGCCAGTGAGGGGTGGTGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| 3UTR TCA 72 bp | ACACCGCTGGCTGCAGCTGCCCATTCTTCAGCACAATaGCAGTTGGAGAAGAGCCTGCTGTCCTCGACCTGC | + |
|
Preference number: 3 (lower is better) Translates to: TPLAAAAHSSAQ*QLEKSLLSSTC Trigger: GCAGGTCGAGGACAGCAGGCTCTTCTCCAACTGTCATTGTGCTGAAGAATGGGCAGCTGCAGCCAGCGGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| 3UTR TCA 72 bp | GCGAGTGGTGCTGGAGGCCAGATCTGCCCACACTTGTaGCTGGACAGACACACGCCTTGTATGTCAGTGACA | + |
|
Preference number: 3 (lower is better) Translates to: ASGAGGQICPHL*LDRHTPCMSVT Trigger: TGTCACTGACATACAAGGCGTGTGTCTGTCCAGTCACAAGTGTGGGCAGATCTGGCCTCCAGCACCACTCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| 3UTR GCA 72 bp | TGTGAATGGAGGGCAGCCCACACCGCTGGCTGCAGCTaGCCATTCTTCAGCACAATGACAGTTGGAGAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: CEWRAAHTAGCS*PFFSTMTVGEE Trigger: CTCTTCTCCAACTGTCATTGTGCTGAAGAATGGGCAGCTGCAGCCAGCGGTGTGGGCTGCCCTCCATTCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| 3UTR-3UTR CAA 90 bp | TGGTCTTGTTGGTTGGCAAAGCACACTGAAGCCAACCAACCCTTCCAGGATTTAAGCCCAGCAGCCAGCTaGGCATTAACCCCCTGCCGG | + |
|
Preference number: 3 (lower is better) Translates to: WSCWLAKHTEANQPFQDLSPAAS*ALTPCR Trigger: CCGGCAGGGGGTTAATGCCAAGCTGGCTGCTGGGCT...TAAATCCTGGAAGGGTTGGTTGGCTTCAGTGTGCTTTGCCAACCAACAAGACCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| 3UTR TCA 72 bp | TGGCAGTCTGATAGCATCACTCACAGCTGTCGGTCGTaGCTTCATTGGATCCCCAGCTGGTCCCAGGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: WQSDSITHSCRS*LHWIPSWSQGR Trigger: TCTTCCCTGGGACCAGCTGGGGATCCAATGAAGTCACGACCGACAGCTGTGAGTGATGCTATCAGACTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| 3UTR GCA 72 bp | TCTAAACCAGAGGCTTTACTGAAAGGAAGCATTCTCTaGAGTCAGCGCTCTGGGAGGGAGCCCAGCAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SKPEALLKGSIL*SQRSGREPSSQ Trigger: CTGGCTGCTGGGCTCCCTCCCAGAGCGCTGACTGCAGAGAATGCTTCCTTTCAGTAAAGCCTCTGGTTTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| 3UTR CCA 72 bp | GCCACCCACACTGTATTTACCCCATGGAGGCTCCTCTaGCCTCTTCTCTTCTGCCTCCGTGTTCTTTCACTC | + |
|
Preference number: 3 (lower is better) Translates to: ATHTVFTPWRLL*PLLFCLRVLSL Trigger: GAGTGAAAGAACACGGAGGCAGAAGAGAAGAGGCCAGAGGAGCCTCCATGGGGTAAATACAGTGTGGGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| 3UTR CCA 72 bp | CAGCTTGGCATTAACCCCCTGCCGGGGAAGTTTCCTTaGCTCCCATTTCCTGGCAGTTACAGGTGCAGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: QLGINPLPGKFP*LPFPGSYRCSK Trigger: CTTACTGCACCTGTAACTGCCAGGAAATGGGAGCCAAGGAAACTTCCCCGGCAGGGGGTTAATGCCAAGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| 3UTR CCA 72 bp | TGGCTGCAGCTGCCCATTCTTCAGCACAATGACAGTTaGAGAAGAGCCTGCTGTCCTCGACCTGCTCACTCA | + |
|
Preference number: 3 (lower is better) Translates to: WLQLPILQHNDS*RRACCPRPAHS Trigger: TGAGTGAGCAGGTCGAGGACAGCAGGCTCTTCTCCAACTGTCATTGTGCTGAAGAATGGGCAGCTGCAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| 3UTR GCA 72 bp | TTTACCCCATGGAGGCTCCTCTGGCCTCTTCTCTTCTaGCTCCGTGTTCTTTCACTCACCCTTTCGCTCACT | + |
|
Preference number: 3 (lower is better) Translates to: FTPWRLLWPLLF*LRVLSLTLSLT Trigger: AGTGAGCGAAAGGGTGAGTGAAAGAACACGGAGGCAGAAGAGAAGAGGCCAGAGGAGCCTCCATGGGGTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| 3UTR CCA 72 bp | GCGTGGAGTTCCAGCATTGGTCAGCAAGAGTCACTGTaGTCTTGTTGGTTGGCAAAGCACACTGAAGCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: AWSSSIGQQESL*SCWLAKHTEAN Trigger: GTTGGCTTCAGTGTGCTTTGCCAACCAACAAGACCACAGTGACTCTTGCTGACCAATGCTGGAACTCCACGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| 3UTR CCA 72 bp | TCTCCAGACAAACATGGCAGCGTGGAGTTCCAGCATTaGTCAGCAAGAGTCACTGTGGTCTTGTTGGTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: SPDKHGSVEFQH*SARVTVVLLVG Trigger: GCCAACCAACAAGACCACAGTGACTCTTGCTGACCAATGCTGGAACTCCACGCTGCCATGTTTGTCTGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| 3UTR-3UTR CAA 90 bp | GGTTGGCAAAGCACACTGAAGCCAACCAACCCTTCCAGGATTTATTGCCATGTATCGGTCGTGACTTCATaGGATCCCCAGCTGGTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: GWQSTLKPTNPSRIYCHVSVVTS*DPQLVP Trigger: TGGGACCAGCTGGGGATCCAATGAAGTCACGACCGA...TACATGGCAATAAATCCTGGAAGGGTTGGTTGGCTTCAGTGTGCTTTGCCAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| 3UTR TCA 72 bp | GAAACCATAGGGCATGCCAGCAAACCATGCTCTGTCTaGGGCCATGAAGGATGTGGGATGCCTGTACTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: ETIGHASKPCSV*GHEGCGMPVLC Trigger: ACAAAGTACAGGCATCCCACATCCTTCATGGCCTCAGACAGAGCATGGTTTGCTGGCATGCCCTATGGTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| 3UTR GCA 72 bp | AAAGCAGCAAGCAGGGAGTCAAGGAAACAACAAGGATaGTGGCTGCCTCAGGCCTTGAAACCTAGTAGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: KAASRESRKQQG*WLPQALKPSSV Trigger: CACACTACTAGGTTTCAAGGCCTGAGGCAGCCAGCATCCTTGTTGTTTCCTTGACTCCCTGCTTGCTGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| 3UTR CCA 72 bp | CCTGAACTCACTCGAGCCTCACCCAGGAATCAGGCATaGTCAAACTCTGAGCAAGTCACCATTTCCTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: PELTRASPRNQA*SNSEQVTISFS Trigger: AGAGAAGGAAATGGTGACTTGCTCAGAGTTTGACCATGCCTGATTCCTGGGTGAGGCTCGAGTGAGTTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| 3UTR CCA 72 bp | GCAGCAAGCAGGGAGTCAAGGAAACAACAAGGATGCTaGCTGCCTCAGGCCTTGAAACCTAGTAGTGTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: AASRESRKQQGC*LPQALKPSSVN Trigger: ATTCACACTACTAGGTTTCAAGGCCTGAGGCAGCCAGCATCCTTGTTGTTTCCTTGACTCCCTGCTTGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCAAACCATGCTCTGTCTGAGGCCATGAAGGATGTGGGATGCCTGTACTTTCCACCAGGAAATGCCTaGAGTTTTGGCAGTCTGATA | + |
|
Preference number: 3 (lower is better) Translates to: PANHALSEAMKDVGCLYFPPGNA*SFGSLI Trigger: TATCAGACTGCCAAAACTCAAGGCATTTCCTGGTGG...AAAGTACAGGCATCCCACATCCTTCATGGCCTCAGACAGAGCATGGTTTGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| 3UTR TCA 72 bp | ATGGTGTGTGACTGCAAACACAGGTCGAGTTACCTCTaGAACCATAGGGCATGCCAGCAAACCATGCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: MVCDCKHRSSYL*NHRACQQTMLC Trigger: ACAGAGCATGGTTTGCTGGCATGCCCTATGGTTTCAGAGGTAACTCGACCTGTGTTTGCAGTCACACACCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| 3UTR TCA 72 bp | AGAGTCACTGTGGTCTTGTTGGTTGGCAAAGCACACTaGAGCCAACCAACCCTTCCAGGATTTATTGCCATG | + |
|
Preference number: 3 (lower is better) Translates to: RVTVVLLVGKAH*SQPTLPGFIAM Trigger: CATGGCAATAAATCCTGGAAGGGTTGGTTGGCTTCAGTGTGCTTTGCCAACCAACAAGACCACAGTGACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| 3UTR GCA 72 bp | CTGTTTATAAGCCCTGTAAACGCTCAGTCCTACAGTTaGCCTTATATGAGAATGGCGGCTGCGTTTCCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: LFISPVNAQSYS*PYMRMAAAFPL Trigger: CAAGGGAAACGCAGCCGCCATTCTCATATAAGGGCAACTGTAGGACTGAGCGTTTACAGGGCTTATAAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| 3UTR-3UTR CAA 90 bp | GTTTATAAGCCCTGTAAACGCTCAGTCCTACAGTTGCCCTTATATGAGAATGGCGAGGAGACAGACACTTaGAATGACTCTCCCAGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: VYKPCKRSVLQLPLYENGEETDT*NDSPSA Trigger: GGCACTGGGAGAGTCATTCAAAGTGTCTGTCTCCTC...GCCATTCTCATATAAGGGCAACTGTAGGACTGAGCGTTTACAGGGCTTATAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| 3UTR-3UTR CAA 90 bp | AAGAGCCTGCTGTCCTCGACCTGCTCACTCATCACGCATGACATTTACAAGTCTGTGGTGGGAAATGGCTaGATGGTTTTAAACACACCA | + |
|
Preference number: 3 (lower is better) Translates to: KSLLSSTCSLITHDIYKSVVGNG*MVLNTP Trigger: TGGTGTGTTTAAAACCATCAAGCCATTTCCCACCAC...AGACTTGTAAATGTCATGCGTGATGAGTGAGCAGGTCGAGGACAGCAGGCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| 3UTR-3UTR CAA 90 bp | AAAATATTCACAATTAAGACTTCACTGGCTCAGGCCCTCAGACCTAGCTTGGGTCGTGGAGTTCCAGCATaGGTCAGCAAGAGTCACTGT | + |
|
Preference number: 3 (lower is better) Translates to: KIFTIKTSLAQALRPSLGRGVPA*VSKSHC Trigger: ACAGTGACTCTTGCTGACCAATGCTGGAACTCCACG...ACCCAAGCTAGGTCTGAGGGCCTGAGCCAGTGAAGTCTTAATTGTGAATATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| 3UTR GCA 72 bp | AACACGGTCTATACCATGCTCCCATCTCTCACTAAGTaGCTCCTTAAAAGACAGGATCAGATTCTTCACCTG | + |
|
Preference number: 3 (lower is better) Translates to: NTVYTMLPSLTK*LLKRQDQILHL Trigger: CAGGTGAAGAATCTGATCCTGTCTTTTAAGGAGGCACTTAGTGAGAGATGGGAGCATGGTATAGACCGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| 3UTR CCA 72 bp | AAAAATAATAACAGTCTCCAGACAAACATGGCAGCGTaGAGTTCCAGCATTGGTCAGCAAGAGTCACTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: KNNNSLQTNMAA*SSSIGQQESLW Trigger: CCACAGTGACTCTTGCTGACCAATGCTGGAACTCCACGCTGCCATGTTTGTCTGGAGACTGTTATTATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| 3UTR GCA 72 bp | GGGAAATGGCTTGATGGTTTTAAACACACCACTGATTaGTCTCCAAAGCCTTTGTTCAGTCATAGGCCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: GKWLDGFKHTTD*SPKPLFSHRPC Trigger: ACAAGGCCTATGACTGAACAAAGGCTTTGGAGAGCAATCAGTGGTGTGTTTAAAACCATCAAGCCATTTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| 3UTR CCA 72 bp | AGTTACAGGTGCAGTAAGAGAATATGCCAAGAGCAATaGCTGTTTATAAGCCCTGTAAACGCTCAGTCCTAC | + |
|
Preference number: 3 (lower is better) Translates to: SYRCSKRICQEQ*LFISPVNAQSY Trigger: GTAGGACTGAGCGTTTACAGGGCTTATAAACAGCCATTGCTCTTGGCATATTCTCTTACTGCACCTGTAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| 3UTR CCA 72 bp | GACAGGATCAGATTCTTCACCTGTGTCCTTCCCACATaGTTTGGTTCATTTGAGTGCTCAATGAACTACTTA | + |
|
Preference number: 3 (lower is better) Translates to: DRIRFFTCVLPT*FGSFECSMNYL Trigger: TAAGTAGTTCATTGAGCACTCAAATGAACCAAACCATGTGGGAAGGACACAGGTGAAGAATCTGATCCTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| 3UTR CCA 72 bp | CCTCTCACAGTATGGTCTATATTCAGTGGTGGGAAATaGCTTGATGGTTTTAAACACACCACTGATTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: PLTVWSIFSGGK*LDGFKHTTDCS Trigger: AGAGCAATCAGTGGTGTGTTTAAAACCATCAAGCCATTTCCCACCACTGAATATAGACCATACTGTGAGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| 3UTR CCA 72 bp | AAAAATTCAGGACCTAATTATGGTCCTCTCACAGTATaGTCTATATTCAGTGGTGGGAAATGGCTTGATGGT | + |
|
Preference number: 3 (lower is better) Translates to: KNSGPNYGPLTV*SIFSGGKWLDG Trigger: ACCATCAAGCCATTTCCCACCACTGAATATAGACCATACTGTGAGAGGACCATAATTAGGTCCTGAATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR GCA 90 bp | CCAGGACCTCAGACCCCAGCTCTGTACTGCGTCTCGGGCTGCACCACCCCTCACATGCGGTCAAAGAGCTaGATGCCATCAGTCATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PGPQTPALYCVSGCTTPHMRSKS*MPSVMP Trigger: GGGCATGACTGATGGCATGCAGCTCTTTGACCGCAT...GTGAGGGGTGGTGCAGCCCGAGACGCAGTACAGAGCTGGGGTCTGAGGTCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR CCA 90 bp | CCAGGACCTCAGACCCCAGCTCTGTACTGCGTCTCGGGCTGCACCACCCCTCACTCACAGACTTCTCCCTaGCCAGGTGAACTAGCGACA | + |
|
Preference number: 4 (lower is better) Translates to: PGPQTPALYCVSGCTTPHSQTSP*PGELAT Trigger: TGTCGCTAGTTCACCTGGCCAGGGAGAAGTCTGTGA...GTGAGGGGTGGTGCAGCCCGAGACGCAGTACAGAGCTGGGGTCTGAGGTCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| 3UTR CAA 72 bp | GTCTCGGGCTGCACCACCCCTCACTGGCTCAGGATGTaGTGCCTGAACTCACTCGAGCCTCACCCAGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: VSGCTTPHWLRM*CLNSLEPHPGI Trigger: GATTCCTGGGTGAGGCTCGAGTGAGTTCAGGCACAACATCCTGAGCCAGTGAGGGGTGGTGCAGCCCGAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR CCA 90 bp | TTGGCATTAACCCCCTGCCGGGGAAGTTTCCTTGGCTCCCATTTCCTGGCAGTTGTAGCCAGGGAGACATaGGCCACACTCAGCGTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: LALTPCRGSFLGSHFLAVVARET*ATLSVV Trigger: AACGACGCTGAGTGTGGCCCATGTCTCCCTGGCTAC...AACTGCCAGGAAATGGGAGCCAAGGAAACTTCCCCGGCAGGGGGTTAATGCCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR CCA 90 bp | CAGCTCTGTACTGCGTCTCGGGCTGCACCACCCCTCACTGGCTCAGGATGTTGTCAGCAGACTTGTTACTaGTCACAGACTTCTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QLCTASRAAPPLTGSGCCQQTCY*SQTSPW Trigger: CCAGGGAGAAGTCTGTGACCAGTAACAAGTCTGCTG...ACAACATCCTGAGCCAGTGAGGGGTGGTGCAGCCCGAGACGCAGTACAGAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR TCA 90 bp | CAGTCCTACAGTTGCCCTTATATGAGAATGGCGGCTGCGTTTCCCTTGACTCTCTGTAGCCCGCGGTGCTaGTGCGGTCAAAGAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QSYSCPYMRMAAAFPLTLCSPRC*CGQRAA Trigger: TGCAGCTCTTTGACCGCATCAGCACCGCGGGCTACA...GAGAGTCAAGGGAAACGCAGCCGCCATTCTCATATAAGGGCAACTGTAGGACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR GCA 90 bp | TTGGCATTAACCCCCTGCCGGGGAAGTTTCCTTGGCTCCCATTTCCTGGCAGTTTCCAGCCGCTCGATCTaGACCAACTTTGTGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LALTPCRGSFLGSHFLAVSSRSI*TNFVSS Trigger: GCTGCTCACAAAGTTGGTGCAGATCGAGCGGCTGGA...AACTGCCAGGAAATGGGAGCCAAGGAAACTTCCCCGGCAGGGGGTTAATGCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR CCA 90 bp | GGCAGTCTGATAGCATCACTCACAGCTGTCGGTCGTGACTTCATTGGATCCCCACGTTCTCACCACAGTTaGAGTCCTCCGCCTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSLIASLTAVGRDFIGSPRSHHS*SPPPWL Trigger: CAGCCAAGGCGGAGGACTCCAACTGTGGTGAGAACG...TGGGGATCCAATGAAGTCACGACCGACAGCTGTGAGTGATGCTATCAGACTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR CCA 90 bp | GGTTGGCAAAGCACACTGAAGCCAACCAACCCTTCCAGGATTTATTGCCATGTAGGGTGGGGAGGCAGGTaGTACAACCCCAGCCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: GWQSTLKPTNPSRIYCHVGWGGR*YNPSPL Trigger: GAGTGGGCTGGGGTTGTACCACCTGCCTCCCCACCC...TACATGGCAATAAATCCTGGAAGGGTTGGTTGGCTTCAGTGTGCTTTGCCAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR TCA 90 bp | TTGGCATTAACCCCCTGCCGGGGAAGTTTCCTTGGCTCCCATTTCCTGGCAGTTACAGCAGGCTGGAGCTaGCGGCTTAGTCTTCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: LALTPCRGSFLGSHFLAVTAGWS*RLSLHD Trigger: ATCATGAAGACTAAGCCGTCAGCTCCAGCCTGCTGT...AACTGCCAGGAAATGGGAGCCAAGGAAACTTCCCCGGCAGGGGGTTAATGCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR GCA 90 bp | AGTCTGGAGGAGACAGACACTTTGAATGACTCTCCCAGTGCCCAGGACCTCAGATTTGGAGAACTTCTCTaGAGGGCAGGGCACACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLEETDTLNDSPSAQDLRFGELL*RAGHTA Trigger: GGCTGTGTGCCCTGCCCTGCAGAGAAGTTCTCCAAA...TCTGAGGTCCTGGGCACTGGGAGAGTCATTCAAAGTGTCTGTCTCCTCCAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR GCA 90 bp | CAGTCCTACAGTTGCCCTTATATGAGAATGGCGGCTGCGTTTCCCTTGACTCTCGTTAGCTGGGGCTTCTaGGCTCTTTCCTGGGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: QSYSCPYMRMAAAFPLTLVSWGF*ALSWGT Trigger: AGTCCCCCAGGAAAGAGCGCAGAAGCCCCAGCTAAC...GAGAGTCAAGGGAAACGCAGCCGCCATTCTCATATAAGGGCAACTGTAGGACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR GCA 90 bp | CTGAGCAAGTCACCATTTCCTTCTCTAGATAGGACGCACGTCCCTTTGAAGCAACTGCATGGAGGACACTaGTGGCACAGCCCGGTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSKSPFPSLDRTHVPLKQLHGGH*WHSPVV Trigger: GACTACCGGGCTGTGCCAGCAGTGTCCTCCATGCAG...TTGCTTCAAAGGGACGTGCGTCCTATCTAGAGAAGGAAATGGTGACTTGCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR GCA 90 bp | ACGGTCTATACCATGCTCCCATCTCTCACTAAGTGCCTCCTTAAAAGACAGGATGCTCCTCCCCTGGTCTaGATGGAGGACACTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TVYTMLPSLTKCLLKRQDAPPLV*MEDTAG Trigger: GCCAGCAGTGTCCTCCATGCAGACCAGGGGAGGAGC...ATCCTGTCTTTTAAGGAGGCACTTAGTGAGAGATGGGAGCATGGTATAGACCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR GCA 90 bp | TTTTTGTGGCCACCCACACTGTATTTACCCCATGGAGGCTCCTCTGGCCTCTTCCTTGGTGTTGGGAGGTaGCAAGAGACAGGAGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FLWPPTLYLPHGGSSGLFLGVGR*QETGVA Trigger: TGCTACTCCTGTCTCTTGGCACCTCCCAACACCAAG...GAAGAGGCCAGAGGAGCCTCCATGGGGTAAATACAGTGTGGGTGGCCACAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR CCA 90 bp | ACTAGTGACTGCAAGGCTTATACCATGGTGTGTGACTGCAAACACAGGTCGAGTGTAGGGCTCCTCCCCTaGTCTGCATGGAGGACACTG | + |
|
Preference number: 4 (lower is better) Translates to: TSDCKAYTMVCDCKHRSSVGLLP*SAWRTL Trigger: CAGTGTCCTCCATGCAGACCAGGGGAGGAGCCCTAC...ACTCGACCTGTGTTTGCAGTCACACACCATGGTATAAGCCTTGCAGTCACTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR CCA 90 bp | GGCAGTCTGATAGCATCACTCACAGCTGTCGGTCGTGACTTCATTGGATCCCCACTGAAACCCCAGAAGTaGCTCCCACACATTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSLIASLTAVGRDFIGSPLKPQK*LPHIPW Trigger: CCAAGGAATGTGTGGGAGCCACTTCTGGGGTTTCAG...TGGGGATCCAATGAAGTCACGACCGACAGCTGTGAGTGATGCTATCAGACTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR CCA 90 bp | GGCAGTTACAGGTGCAGTAAGAGAATATGCCAAGAGCAATGGCTGTTTATAAGCGGACGCAGCTGGGGGTaGGGAGGCAGGTGGTACAAC | + |
|
Preference number: 4 (lower is better) Translates to: GSYRCSKRICQEQWLFISGRSWG*GGRWYN Trigger: GTTGTACCACCTGCCTCCCCACCCCCAGCTGCGTCC...GCTTATAAACAGCCATTGCTCTTGGCATATTCTCTTACTGCACCTGTAACTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| 3UTR CAA 72 bp | GAGAATGGCGGCTGCGTTTCCCTTGACTCTCATTTTTaGTGGCCACCCACACTGTATTTACCCCATGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ENGGCVSLDSHF*WPPTLYLPHGG Trigger: GCCTCCATGGGGTAAATACAGTGTGGGTGGCCACAAAAAATGAGAGTCAAGGGAAACGCAGCCGCCATTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| 3UTR CAA 72 bp | GTCTCCAGACAAACATGGCAGCGTGGAGTTCCAGCATaGGTCAGCAAGAGTCACTGTGGTCTTGTTGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSRQTWQRGVPA*VSKSHCGLVGW Trigger: CCAACCAACAAGACCACAGTGACTCTTGCTGACCAATGCTGGAACTCCACGCTGCCATGTTTGTCTGGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR GCA 90 bp | AGTCTCCAGACAAACATGGCAGCGTGGAGTTCCAGCATTGGTCAGCAAGAGTCAGCATGCCATCAGTCATaGCCCCAATCTCATCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLQTNMAAWSSSIGQQESACHQS*PQSHPS Trigger: AGAGGGATGAGATTGGGGGCATGACTGATGGCATGC...TGACTCTTGCTGACCAATGCTGGAACTCCACGCTGCCATGTTTGTCTGGAGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR CCA 90 bp | AAGAGCCTGCTGTCCTCGACCTGCTCACTCATCACGCATGACATTTACAAGTCTAAGCTCTCGGCAAGGTaGCGCCATGTTTTCACGACC | + |
|
Preference number: 4 (lower is better) Translates to: KSLLSSTCSLITHDIYKSKLSAR*RHVFTT Trigger: GGTCGTGAAAACATGGCGCCACCTTGCCGAGAGCTT...AGACTTGTAAATGTCATGCGTGATGAGTGAGCAGGTCGAGGACAGCAGGCTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR TCA 90 bp | AGACCAGGGGTAAGGGACACTGCAGGGTCTCAGGAATTAAAAGGACAATTAAGCCCTGAGAGCTCTTTGTaGGCATGCTGGAAGGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RPGVRDTAGSQELKGQLSPESSL*ACWKGD Trigger: GTCTCCCTTCCAGCATGCTCACAAAGAGCTCTCAGG...GCTTAATTGTCCTTTTAATTCCTGAGACCCTGCAGTGTCCCTTACCCCTGGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR CCA 90 bp | CTCAACATTCCTGACTACAGATGTGAAGACCAACCTCTCTCAGCTAAGAGAAGCCTTTGTGAGCAGCTCTaGGATGCTGTAGCCCGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LNIPDYRCEDQPLSAKRSLCEQL*DAVARG Trigger: ACCGCGGGCTACAGCATCCCAGAGCTGCTCACAAAG...GCTTCTCTTAGCTGAGAGAGGTTGGTCTTCACATCTGTAGTCAGGAATGTTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR TCA 90 bp | AACACACCACTGATTGCTCTCCAAAGCCTTTGTTCAGTCATAGGCCTTGTAAAAGTCCTCCGCCTTGGCTaGGCACATCAGAGACACCAC | + |
|
Preference number: 4 (lower is better) Translates to: NTPLIALQSLCSVIGLVKVLRLG*AHQRHH Trigger: GTGGTGTCTCTGATGTGCTCAGCCAAGGCGGAGGAC...TTTTACAAGGCCTATGACTGAACAAAGGCTTTGGAGAGCAATCAGTGGTGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR GCA 90 bp | AACCATGCTCTGTCTGAGGCCATGAAGGATGTGGGATGCCTGTACTTTGTAACCAGGAGTAGCAGACCATaGCATAGATGTTCCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: NHALSEAMKDVGCLYFVTRSSRP*HRCSWV Trigger: GACCCAGGAACATCTATGGCATGGTCTGCTACTCCT...GGTTACAAAGTACAGGCATCCCACATCCTTCATGGCCTCAGACAGAGCATGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR CCA 90 bp | AAGAGCCTGCTGTCCTCGACCTGCTCACTCATCACGCATGACATTTACAAGTCTCCGGTAGTCTGGTTGTaGTATTCGTTCTCACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: KSLLSSTCSLITHDIYKSPVVWL*YSFSPQ Trigger: CTGTGGTGAGAACGAATACCACAACCAGACTACCGG...AGACTTGTAAATGTCATGCGTGATGAGTGAGCAGGTCGAGGACAGCAGGCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR CCA 90 bp | CTTAAAAGACAGGATCAGATTCTTCACCTGTGTCCTTCCCACATGGTTTGGTTCTGGAGTCCTCCGCCTTaGCTGAGCACATCAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: LKRQDQILHLCPSHMVWFWSPPP*LSTSET Trigger: TGTCTCTGATGTGCTCAGCCAAGGCGGAGGACTCCA...GAACCAAACCATGTGGGAAGGACACAGGTGAAGAATCTGATCCTGTCTTTTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR CCA 90 bp | AACCATGCTCTGTCTGAGGCCATGAAGGATGTGGGATGCCTGTACTTTGTAACCTCTGATAACCTCCTTTaGAGAACTTCTCTGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NHALSEAMKDVGCLYFVTSDNLL*RTSLQG Trigger: GCCCTGCAGAGAAGTTCTCCAAAGGAGGTTATCAGA...GGTTACAAAGTACAGGCATCCCACATCCTTCATGGCCTCAGACAGAGCATGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR CCA 90 bp | GGCAGTTACAGGTGCAGTAAGAGAATATGCCAAGAGCAATGGCTGTTTATAAGCGTTTTCCATGTCTCCTaGTGTCAGCACAGTGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GSYRCSKRICQEQWLFISVFHVS*CQHSGP Trigger: CGGGCCACTGTGCTGACACCAGGAGACATGGAAAAC...GCTTATAAACAGCCATTGCTCTTGGCATATTCTCTTACTGCACCTGTAACTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR CCA 90 bp | TTGGAGAAGAGCCTGCTGTCCTCGACCTGCTCACTCATCACGCATGACATTTACTGCCATAGATGTTCCTaGGTCTGTTTTCCAGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: LEKSLLSSTCSLITHDIYCHRCS*VCFPAC Trigger: ACATGCTGGAAAACAGACCCAGGAACATCTATGGCA...GTAAATGTCATGCGTGATGAGTGAGCAGGTCGAGGACAGCAGGCTCTTCTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR CCA 90 bp | ACGGTCTATACCATGCTCCCATCTCTCACTAAGTGCCTCCTTAAAAGACAGGATCACATTCCTTGGTGTTaGGAGGTGCCAAGAGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: TVYTMLPSLTKCLLKRQDHIPWC*EVPRDR Trigger: CCTGTCTCTTGGCACCTCCCAACACCAAGGAATGTG...ATCCTGTCTTTTAAGGAGGCACTTAGTGAGAGATGGGAGCATGGTATAGACCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR CCA 90 bp | AACCATGCTCTGTCTGAGGCCATGAAGGATGTGGGATGCCTGTACTTTGTAACCTTTTGGGGGTCTTTGTaGGTGTTGCTGTCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NHALSEAMKDVGCLYFVTFWGSL*VLLSAS Trigger: AGAAGCTGACAGCAACACCCACAAAGACCCCCAAAA...GGTTACAAAGTACAGGCATCCCACATCCTTCATGGCCTCAGACAGAGCATGGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR CCA 90 bp | TACAGGTGCAGTAAGAGAATATGCCAAGAGCAATGGCTGTTTATAAGCCCTGTACTGCTTGTCCGGGGCTaGCTCTTCATCACTGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: YRCSKRICQEQWLFISPVLLVRG*LFITVH Trigger: GTGGACAGTGATGAAGAGCCAGCCCCGGACAAGCAG...TACAGGGCTTATAAACAGCCATTGCTCTTGGCATATTCTCTTACTGCACCTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR TCA 90 bp | TACAGGTGCAGTAAGAGAATATGCCAAGAGCAATGGCTGTTTATAAGCCCTGTATTCTCCCTGGCCAGGTaGACTAGCGACAGCAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: YRCSKRICQEQWLFISPVFSLAR*TSDSRH Trigger: ATGTCTGCTGTCGCTAGTTCACCTGGCCAGGGAGAA...TACAGGGCTTATAAACAGCCATTGCTCTTGGCATATTCTCTTACTGCACCTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR GCA 90 bp | AAGGGACACTGCAGGGTCTCAGGAATTAAAAGGACAATTAAGCAGACATTTAACTCTTTCCTGGGGGACTaGTACAGCAGGCTGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KGHCRVSGIKRTIKQTFNSFLGD*YSRLEL Trigger: CAGCTCCAGCCTGCTGTAGCAGTCCCCCAGGAAAGA...GTTAAATGTCTGCTTAATTGTCCTTTTAATTCCTGAGACCCTGCAGTGTCCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR CCA 90 bp | CACTGCAGGGTCTCAGGAATTAAAAGGACAATTAAGCAGACATTTAACTTGCAACTGGTGTCAGCACAGTaGCCCGGAAGAAGCCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: HCRVSGIKRTIKQTFNLQLVSAQ*PGRSPH Trigger: GTGAGGGCTTCTTCCGGGCCACTGTGCTGACACCAG...TTGCAAGTTAAATGTCTGCTTAATTGTCCTTTTAATTCCTGAGACCCTGCAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR TCA 90 bp | AACACACCACTGATTGCTCTCCAAAGCCTTTGTTCAGTCATAGGCCTTGTAAAATCTGCACCAACTTTGTaGGCAGCTCTGGGATGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NTPLIALQSLCSVIGLVKSAPTL*AALGCC Trigger: ACAGCATCCCAGAGCTGCTCACAAAGTTGGTGCAGA...TTTTACAAGGCCTATGACTGAACAAAGGCTTTGGAGAGCAATCAGTGGTGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| 3UTR CAA 72 bp | TCACCATTTCCTTCTCTAGATAGGACGCACGTCCCTTaGAAGCAAGACAAGCCTGACATTGTAACTGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SPFPSLDRTHVP*KQDKPDIVTAV Trigger: CACAGCAGTTACAATGTCAGGCTTGTCTTGCTTCAAAGGGACGTGCGTCCTATCTAGAGAAGGAAATGGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR GCA 90 bp | AACACACCACTGATTGCTCTCCAAAGCCTTTGTTCAGTCATAGGCCTTGTAAAACCACTCCAATATGTCTaGACACAAGGACTCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: NTPLIALQSLCSVIGLVKPLQYV*TQGLHS Trigger: GCTGTGGAGTCCTTGTGTGCAGACATATTGGAGTGG...TTTTACAAGGCCTATGACTGAACAAAGGCTTTGGAGAGCAATCAGTGGTGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR CCA 90 bp | GTTTATAAGCCCTGTAAACGCTCAGTCCTACAGTTGCCCTTATATGAGAATGGCCAACACCACACACGTTaGCATACACATCCAGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: VYKPCKRSVLQLPLYENGQHHTR*HTHPVS Trigger: AGATACTGGATGTGTATGCCAACGTGTGTGGTGTTG...GCCATTCTCATATAAGGGCAACTGTAGGACTGAGCGTTTACAGGGCTTATAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR CCA 90 bp | AACACACCACTGATTGCTCTCCAAAGCCTTTGTTCAGTCATAGGCCTTGTAAAACATCATTCTCACTTTTaGGGGTCTTTGTGGGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: NTPLIALQSLCSVIGLVKHHSHF*GSLWVL Trigger: CAACACCCACAAAGACCCCCAAAAGTGAGAATGATG...TTTTACAAGGCCTATGACTGAACAAAGGCTTTGGAGAGCAATCAGTGGTGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| 3UTR CAA 72 bp | TCACAGTATGGTCTATATTCAGTGGTGGGAAATGGCTaGATGGTTTTAAACACACCACTGATTGCTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SQYGLYSVVGNG*MVLNTPLIALQ Trigger: TTGGAGAGCAATCAGTGGTGTGTTTAAAACCATCAAGCCATTTCCCACCACTGAATATAGACCATACTGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS CCA 90 bp | TCCCCTGGTCTGCATGGAGGACACTGCTGGCACAGCCCGGTAGTCTaGTTGTGGTATTCGTTCTCACCACAGTTGGAGTCCTCCGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SPGLHGGHCWHSPVV*LWYSFSPQLESSAL Trigger: CAAGGCGGAGGACTCCAACTGTGGTGAGAACGAATACCACAACCAGACTACCGGGCTGTGCCAGCAGTGTCCTCCATGCAGACCAGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS CCA 90 bp | AGTGCCGTATCCACAGGACATGTAGGGCTCCTCCCCTGGTCTGCATaGAGGACACTGCTGGCACAGCCCGGTAGTCTGGTTGTGGTATTC | + |
|
Preference number: 5 (lower is better) Translates to: SAVSTGHVGLLPWSA*RTLLAQPGSLVVVF Trigger: GAATACCACAACCAGACTACCGGGCTGTGCCAGCAGTGTCCTCCATGCAGACCAGGGGAGGAGCCCTACATGTCCTGTGGATACGGCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS CCA 90 bp | GCCAGGGAGACATGGGCCACACTCAGCGTCGTTTTCCATGTCTCCTaGTGTCAGCACAGTGGCCCGGAAGAAGCCCTCACAGTCTTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ARETWATLSVVFHVS*CQHSGPEEALTVFV Trigger: CACAAAGACTGTGAGGGCTTCTTCCGGGCCACTGTGCTGACACCAGGAGACATGGAAAACGACGCTGAGTGTGGCCCATGTCTCCCTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS GCA 90 bp | GGCCTGAGAGCTCTTTGTGAGCATGCTGGAAGGGAGACAAGGTGCTaGCACCGGAAGTGCTGGATGAGTGTGCTGAAACCCCAGAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GLRALCEHAGRETRC*HRKCWMSVLKPQKW Trigger: CCACTTCTGGGGTTTCAGCACACTCATCCAGCACTTCCGGTGGCAGCACCTTGTCTCCCTTCCAGCATGCTCACAAAGAGCTCTCAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS GCA 90 bp | GGGACCCCTGCTTGTCCGGGGCTGGCTCTTCATCACTGTCCACACTaGGACTTAGCAACTGCTCGTTCTCAGAGGAGGCATCATTCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: GTPACPGLALHHCPH*DLATARSQRRHHSH Trigger: GTGAGAATGATGCCTCCTCTGAGAACGAGCAGTTGCTAAGTCGCAGTGTGGACAGTGATGAAGAGCCAGCCCCGGACAAGCAGGGGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS CCA 90 bp | GGCCACACTCAGCGTCGTTTTCCATGTCTCCTGGTGTCAGCACAGTaGCCCGGAAGAAGCCCTCACAGTCTTTGTGGCGCCTGCATATCT | + |
|
Preference number: 5 (lower is better) Translates to: GHTQRRFPCLLVSAQ*PGRSPHSLCGACIS Trigger: AGATATGCAGGCGCCACAAAGACTGTGAGGGCTTCTTCCGGGCCACTGTGCTGACACCAGGAGACATGGAAAACGACGCTGAGTGTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS CCA 90 bp | TGCTGCCACCGGAAGTGCTGGATGAGTGTGCTGAAACCCCAGAAGTaGCTCCCACACATTCCTTGGTGTTGGGAGGTGCCAAGAGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: CCHRKCWMSVLKPQK*LPHIPWCWEVPRDR Trigger: CCTGTCTCTTGGCACCTCCCAACACCAAGGAATGTGTGGGAGCCACTTCTGGGGTTTCAGCACACTCATCCAGCACTTCCGGTGGCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS CCA 90 bp | GGCTCTGGATCCCAGCAGACTTGTTACTGGTCACAGACTTCTCCCTaGCCAGGTGAACTAGCGACAGCAGACATAGCTCTGGGGACCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GSGSQQTCYWSQTSP*PGELATADIALGTP Trigger: AGGGGTCCCCAGAGCTATGTCTGCTGTCGCTAGTTCACCTGGCCAGGGAGAAGTCTGTGACCAGTAACAAGTCTGCTGGGATCCAGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS TCA 90 bp | GTTGTGGTATTCGTTCTCACCACAGTTGGAGTCCTCCGCCTTGGCTaGGCACATCAGAGACACCACCAGCACTGGGAGCCAGGACATCCA | + |
|
Preference number: 5 (lower is better) Translates to: VVVFVLTTVGVLRLG*AHQRHHQHWEPGHP Trigger: TGGATGTCCTGGCTCCCAGTGCTGGTGGTGTCTCTGATGTGCTCAGCCAAGGCGGAGGACTCCAACTGTGGTGAGAACGAATACCACAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS TCA 90 bp | ATCCCAGCAGACTTGTTACTGGTCACAGACTTCTCCCTGGCCAGGTaGACTAGCGACAGCAGACATAGCTCTGGGGACCCCTGCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: IPADLLLVTDFSLAR*TSDSRHSSGDPCLS Trigger: GGACAAGCAGGGGTCCCCAGAGCTATGTCTGCTGTCGCTAGTTCACCTGGCCAGGGAGAAGTCTGTGACCAGTAACAAGTCTGCTGGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS GCA 90 bp | CTTGGCCTGAGAGCTCTTTGTGAGCATGCTGGAAGGGAGACAAGGTaGTGCCACCGGAAGTGCTGGATGAGTGTGCTGAAACCCCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LGLRALCEHAGRETR*CHRKCWMSVLKPQK Trigger: CTTCTGGGGTTTCAGCACACTCATCCAGCACTTCCGGTGGCAGCACCTTGTCTCCCTTCCAGCATGCTCACAAAGAGCTCTCAGGCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS CCA 90 bp | TGTGAGCATGCTGGAAGGGAGACAAGGTGCTGCCACCGGAAGTGCTaGATGAGTGTGCTGAAACCCCAGAAGTGGCTCCCACACATTCCT | + |
|
Preference number: 5 (lower is better) Translates to: CEHAGRETRCCHRKC*MSVLKPQKWLPHIP Trigger: AGGAATGTGTGGGAGCCACTTCTGGGGTTTCAGCACACTCATCCAGCACTTCCGGTGGCAGCACCTTGTCTCCCTTCCAGCATGCTCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS GCA 90 bp | TCAGCACAGTGGCCCGGAAGAAGCCCTCACAGTCTTTGTGGCGCCTaGATATCTGATAACCTCCTTTGGAGAACTTCTCTGCAGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SAQWPGRSPHSLCGA*ISDNLLWRTSLQGR Trigger: CCTGCCCTGCAGAGAAGTTCTCCAAAGGAGGTTATCAGATATGCAGGCGCCACAAAGACTGTGAGGGCTTCTTCCGGGCCACTGTGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS GCA 90 bp | CTTTGTGAGCATGCTGGAAGGGAGACAAGGTGCTGCCACCGGAAGTaGTGGATGAGTGTGCTGAAACCCCAGAAGTGGCTCCCACACATT | + |
|
Preference number: 5 (lower is better) Translates to: LCEHAGRETRCCHRK*WMSVLKPQKWLPHI Trigger: AATGTGTGGGAGCCACTTCTGGGGTTTCAGCACACTCATCCAGCACTTCCGGTGGCAGCACCTTGTCTCCCTTCCAGCATGCTCACAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR CAA 90 bp | CGCTCAGTCCTACAGTTGCCCTTATATGAGAATGGCGGCTGCGTTTCCCTTGACTTGGAGTCCTCCGCCTaGGCTGAGCACATCAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: RSVLQLPLYENGGCVSLDLESSA*AEHIRD Trigger: GTCTCTGATGTGCTCAGCCAAGGCGGAGGACTCCAA...GTCAAGGGAAACGCAGCCGCCATTCTCATATAAGGGCAACTGTAGGACTGAGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS-3UTR CAA 90 bp | GTGGCCACCCACACTGTATTTACCCCATGGAGGCTCCTCTGGCCTCTTCTCTTCAGCCCGGTAGTCTGGTaGTGGTATTCGTTCTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: VATHTVFTPWRLLWPLLFSPVVW*WYSFSP Trigger: TGGTGAGAACGAATACCACAACCAGACTACCGGGCT...GAAGAGAAGAGGCCAGAGGAGCCTCCATGGGGTAAATACAGTGTGGGTGGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS CCA 90 bp | AGCCCTCACAGTCTTTGTGGCGCCTGCATATCTGATAACCTCCTTTaGAGAACTTCTCTGCAGGGCAGGGCACACAGCCATAGTCGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: SPHSLCGACISDNLL*RTSLQGRAHSHSRR Trigger: ACGACGACTATGGCTGTGTGCCCTGCCCTGCAGAGAAGTTCTCCAAAGGAGGTTATCAGATATGCAGGCGCCACAAAGACTGTGAGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS CCA 90 bp | GAGGTGCCAAGAGACAGGAGTAGCAGACCATGCCATAGATGTTCCTaGGTCTGTTTTCCAGCATGTAGTAGCCAGGGAGACATGGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: EVPRDRSSRPCHRCS*VCFPACSSQGDMGH Trigger: GTGGCCCATGTCTCCCTGGCTACTACATGCTGGAAAACAGACCCAGGAACATCTATGGCATGGTCTGCTACTCCTGTCTCTTGGCACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS CCA 90 bp | TGGATGAGTGTGCTGAAACCCCAGAAGTGGCTCCCACACATTCCTTaGTGTTGGGAGGTGCCAAGAGACAGGAGTAGCAGACCATGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: WMSVLKPQKWLPHIP*CWEVPRDRSSRPCH Trigger: ATGGCATGGTCTGCTACTCCTGTCTCTTGGCACCTCCCAACACCAAGGAATGTGTGGGAGCCACTTCTGGGGTTTCAGCACACTCATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
||
| CDS CCA 90 bp | CCAGTATCTTTTTCCTCCGGCTCTGGATCCCAGCAGACTTGTTACTaGTCACAGACTTCTCCCTGGCCAGGTGAACTAGCGACAGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: PVSFSSGSGSQQTCY*SQTSPWPGELATAD Trigger: GTCTGCTGTCGCTAGTTCACCTGGCCAGGGAGAAGTCTGTGACCAGTAACAAGTCTGCTGGGATCCAGAGCCGGAGGAAAAAGATACTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| CDS CCA 90 bp | AGTGTGCTGAAACCCCAGAAGTGGCTCCCACACATTCCTTGGTGTTaGGAGGTGCCAAGAGACAGGAGTAGCAGACCATGCCATAGATGT | + |
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Preference number: 5 (lower is better) Translates to: SVLKPQKWLPHIPWC*EVPRDRSSRPCHRC Trigger: ACATCTATGGCATGGTCTGCTACTCCTGTCTCTTGGCACCTCCCAACACCAAGGAATGTGTGGGAGCCACTTCTGGGGTTTCAGCACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| CDS CCA 90 bp | ATGCCCCCAATCTCATCCCTCTTCAGTCCAAAGCTCTCGGCAAGGTaGCGCCATGTTTTCACGACCGCCTTCTCAGAGTTGTATGTAGAG | + |
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Preference number: 5 (lower is better) Translates to: MPPISSLFSPKLSAR*RHVFTTAFSELYVE Trigger: CTCTACATACAACTCTGAGAAGGCGGTCGTGAAAACATGGCGCCACCTTGCCGAGAGCTTTGGACTGAAGAGGGATGAGATTGGGGGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| CDS-3UTR CAA 90 bp | AGTCTGGAGGAGACAGACACTTTGAATGACTCTCCCAGTGCCCAGGACCTCAGAGGGTCTTTGTGGGTGTaGCTGTCAGCTTCTGGAACT | + |
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Preference number: 5 (lower is better) Translates to: SLEETDTLNDSPSAQDLRGSLWV*LSASGT Trigger: AGTTCCAGAAGCTGACAGCAACACCCACAAAGACCC...TCTGAGGTCCTGGGCACTGGGAGAGTCATTCAAAGTGTCTGTCTCCTCCAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| CDS TCA 90 bp | TTCGGCTTGTCTTCTCAAGGCAGTCAAACGGCAACTCGGTGGGGCTaGGACCTTCAACAACACCACACACGTTGGCATACACATCCAGTA | + |
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Preference number: 5 (lower is better) Translates to: FGLSSQGSQTATRWG*DLQQHHTRWHTHPV Trigger: TACTGGATGTGTATGCCAACGTGTGTGGTGTTGTTGAAGGTCTCAGCCCCACCGAGTTGCCGTTTGACTGCCTTGAGAAGACAAGCCGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| CDS GCA 90 bp | TTTGTGGCGCCTGCATATCTGATAACCTCCTTTGGAGAACTTCTCTaGAGGGCAGGGCACACAGCCATAGTCGTCGTCTTTAGTGCCGTA | + |
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Preference number: 5 (lower is better) Translates to: FVAPAYLITSFGELL*RAGHTAIVVVFSAV Trigger: TACGGCACTAAAGACGACGACTATGGCTGTGTGCCCTGCCCTGCAGAGAAGTTCTCCAAAGGAGGTTATCAGATATGCAGGCGCCACAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| CDS GCA 90 bp | ATTCCTTGGTGTTGGGAGGTGCCAAGAGACAGGAGTAGCAGACCATaGCATAGATGTTCCTGGGTCTGTTTTCCAGCATGTAGTAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: IPWCWEVPRDRSSRP*HRCSWVCFPACSSQ Trigger: CTGGCTACTACATGCTGGAAAACAGACCCAGGAACATCTATGGCATGGTCTGCTACTCCTGTCTCTTGGCACCTCCCAACACCAAGGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| CDS-3UTR CAA 90 bp | AGTCTGGAGGAGACAGACACTTTGAATGACTCTCCCAGTGCCCAGGACCTCAGAACCGCCTTCTCAGAGTaGTATGTAGAGCTGAGCATT | + |
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Preference number: 5 (lower is better) Translates to: SLEETDTLNDSPSAQDLRTAFSE*YVELSI Trigger: AATGCTCAGCTCTACATACAACTCTGAGAAGGCGGT...TCTGAGGTCCTGGGCACTGGGAGAGTCATTCAAAGTGTCTGTCTCCTCCAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| CDS CCA 90 bp | GACTTAGCAACTGCTCGTTCTCAGAGGAGGCATCATTCTCACTTTTaGGGGTCTTTGTGGGTGTTGCTGTCAGCTTCTGGAACTCACCAT | + |
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Preference number: 5 (lower is better) Translates to: DLATARSQRRHHSHF*GSLWVLLSASGTHH Trigger: ATGGTGAGTTCCAGAAGCTGACAGCAACACCCACAAAGACCCCCAAAAGTGAGAATGATGCCTCCTCTGAGAACGAGCAGTTGCTAAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| CDS-3UTR CAA 90 bp | AACACACCACTGATTGCTCTCCAAAGCCTTTGTTCAGTCATAGGCCTTGTAAAAGCTCCCACACATTCCTaGGTGTTGGGAGGTGCCAAG | + |
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Preference number: 5 (lower is better) Translates to: NTPLIALQSLCSVIGLVKAPTHS*VLGGAK Trigger: CTTGGCACCTCCCAACACCAAGGAATGTGTGGGAGC...TTTTACAAGGCCTATGACTGAACAAAGGCTTTGGAGAGCAATCAGTGGTGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| CDS-3UTR CAA 90 bp | AACACACCACTGATTGCTCTCCAAAGCCTTTGTTCAGTCATAGGCCTTGTAAAACACTTTTGGGGGTCTTaGTGGGTGTTGCTGTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: NTPLIALQSLCSVIGLVKHFWGS*WVLLSA Trigger: AGCTGACAGCAACACCCACAAAGACCCCCAAAAGTG...TTTTACAAGGCCTATGACTGAACAAAGGCTTTGGAGAGCAATCAGTGGTGTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| CDS CCA 72 bp | CAGCGTCGTTTTCCATGTCTCCTGGTGTCAGCACAGTaGCCCGGAAGAAGCCCTCACAGTCTTTGTGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: QRRFPCLLVSAQ*PGRSPHSLCGA Trigger: GGCGCCACAAAGACTGTGAGGGCTTCTTCCGGGCCACTGTGCTGACACCAGGAGACATGGAAAACGACGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| CDS CAA 90 bp | CCTGGTCTGCATGGAGGACACTGCTGGCACAGCCCGGTAGTCTGGTaGTGGTATTCGTTCTCACCACAGTTGGAGTCCTCCGCCTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: PGLHGGHCWHSPVVW*WYSFSPQLESSALA Trigger: AGCCAAGGCGGAGGACTCCAACTGTGGTGAGAACGAATACCACAACCAGACTACCGGGCTGTGCCAGCAGTGTCCTCCATGCAGACCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| CDS CAA 90 bp | TGGCACAGCCCGGTAGTCTGGTTGTGGTATTCGTTCTCACCACAGTaGGAGTCCTCCGCCTTGGCTGAGCACATCAGAGACACCACCAGC | + |
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Preference number: 6 (lower is better) Translates to: WHSPVVWLWYSFSPQ*ESSALAEHIRDTTS Trigger: GCTGGTGGTGTCTCTGATGTGCTCAGCCAAGGCGGAGGACTCCAACTGTGGTGAGAACGAATACCACAACCAGACTACCGGGCTGTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| CDS CCA 72 bp | ACATGGGCCACACTCAGCGTCGTTTTCCATGTCTCCTaGTGTCAGCACAGTGGCCCGGAAGAAGCCCTCACA | + |
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Preference number: 6 (lower is better) Translates to: TWATLSVVFHVS*CQHSGPEEALT Trigger: TGTGAGGGCTTCTTCCGGGCCACTGTGCTGACACCAGGAGACATGGAAAACGACGCTGAGTGTGGCCCATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| CDS TCA 72 bp | GACTTGTTACTGGTCACAGACTTCTCCCTGGCCAGGTaGACTAGCGACAGCAGACATAGCTCTGGGGACCCC | + |
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Preference number: 6 (lower is better) Translates to: DLLLVTDFSLAR*TSDSRHSSGDP Trigger: GGGGTCCCCAGAGCTATGTCTGCTGTCGCTAGTTCACCTGGCCAGGGAGAAGTCTGTGACCAGTAACAAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| CDS GCA 72 bp | GCTTGTCCGGGGCTGGCTCTTCATCACTGTCCACACTaGGACTTAGCAACTGCTCGTTCTCAGAGGAGGCAT | + |
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Preference number: 6 (lower is better) Translates to: ACPGLALHHCPH*DLATARSQRRH Trigger: ATGCCTCCTCTGAGAACGAGCAGTTGCTAAGTCGCAGTGTGGACAGTGATGAAGAGCCAGCCCCGGACAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| CDS CCA 72 bp | GGTATTCGTTCTCACCACAGTTGGAGTCCTCCGCCTTaGCTGAGCACATCAGAGACACCACCAGCACTGGGA | + |
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Preference number: 6 (lower is better) Translates to: GIRSHHSWSPPP*LSTSETPPALG Trigger: TCCCAGTGCTGGTGGTGTCTCTGATGTGCTCAGCCAAGGCGGAGGACTCCAACTGTGGTGAGAACGAATACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| CDS CCA 72 bp | CTGCATGGAGGACACTGCTGGCACAGCCCGGTAGTCTaGTTGTGGTATTCGTTCTCACCACAGTTGGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: LHGGHCWHSPVV*LWYSFSPQLES Trigger: GGACTCCAACTGTGGTGAGAACGAATACCACAACCAGACTACCGGGCTGTGCCAGCAGTGTCCTCCATGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| CDS CAA 72 bp | TGGTATTCGTTCTCACCACAGTTGGAGTCCTCCGCCTaGGCTGAGCACATCAGAGACACCACCAGCACTGGG | + |
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Preference number: 6 (lower is better) Translates to: WYSFSPQLESSA*AEHIRDTTSTG Trigger: CCCAGTGCTGGTGGTGTCTCTGATGTGCTCAGCCAAGGCGGAGGACTCCAACTGTGGTGAGAACGAATACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| CDS CAA 72 bp | CATGGAGGACACTGCTGGCACAGCCCGGTAGTCTGGTaGTGGTATTCGTTCTCACCACAGTTGGAGTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: HGGHCWHSPVVW*WYSFSPQLESS Trigger: GGAGGACTCCAACTGTGGTGAGAACGAATACCACAACCAGACTACCGGGCTGTGCCAGCAGTGTCCTCCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| CDS CCA 72 bp | TTTTCCTCCGGCTCTGGATCCCAGCAGACTTGTTACTaGTCACAGACTTCTCCCTGGCCAGGTGAACTAGCG | + |
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Preference number: 6 (lower is better) Translates to: FSSGSGSQQTCY*SQTSPWPGELA Trigger: CGCTAGTTCACCTGGCCAGGGAGAAGTCTGTGACCAGTAACAAGTCTGCTGGGATCCAGAGCCGGAGGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| CDS CCA 72 bp | TCCCAGCAGACTTGTTACTGGTCACAGACTTCTCCCTaGCCAGGTGAACTAGCGACAGCAGACATAGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: SQQTCYWSQTSP*PGELATADIAL Trigger: CAGAGCTATGTCTGCTGTCGCTAGTTCACCTGGCCAGGGAGAAGTCTGTGACCAGTAACAAGTCTGCTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| CDS CCA 72 bp | ATCTCATCCCTCTTCAGTCCAAAGCTCTCGGCAAGGTaGCGCCATGTTTTCACGACCGCCTTCTCAGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: ISSLFSPKLSAR*RHVFTTAFSEL Trigger: CAACTCTGAGAAGGCGGTCGTGAAAACATGGCGCCACCTTGCCGAGAGCTTTGGACTGAAGAGGGATGAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| CDS CAA 90 bp | CTCTCGGCAAGGTGGCGCCATGTTTTCACGACCGCCTTCTCAGAGTaGTATGTAGAGCTGAGCATTCGGCTTGTCTTCTCAAGGCAGTCA | + |
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Preference number: 6 (lower is better) Translates to: LSARWRHVFTTAFSE*YVELSIRLVFSRQS Trigger: TGACTGCCTTGAGAAGACAAGCCGAATGCTCAGCTCTACATACAACTCTGAGAAGGCGGTCGTGAAAACATGGCGCCACCTTGCCGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| CDS TCA 72 bp | TCTTCTCAAGGCAGTCAAACGGCAACTCGGTGGGGCTaGGACCTTCAACAACACCACACACGTTGGCATACA | + |
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Preference number: 6 (lower is better) Translates to: SSQGSQTATRWG*DLQQHHTRWHT Trigger: TGTATGCCAACGTGTGTGGTGTTGTTGAAGGTCTCAGCCCCACCGAGTTGCCGTTTGACTGCCTTGAGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| CDS GCA 72 bp | TGGCCCGGAAGAAGCCCTCACAGTCTTTGTGGCGCCTaGATATCTGATAACCTCCTTTGGAGAACTTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: WPGRSPHSLCGA*ISDNLLWRTSL Trigger: CAGAGAAGTTCTCCAAAGGAGGTTATCAGATATGCAGGCGCCACAAAGACTGTGAGGGCTTCTTCCGGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| CDS CCA 72 bp | AGTCTTTGTGGCGCCTGCATATCTGATAACCTCCTTTaGAGAACTTCTCTGCAGGGCAGGGCACACAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: SLCGACISDNLL*RTSLQGRAHSH Trigger: ATGGCTGTGTGCCCTGCCCTGCAGAGAAGTTCTCCAAAGGAGGTTATCAGATATGCAGGCGCCACAAAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| CDS TCA 72 bp | GCTCTTTCCTGGGGGACTGCTACAGCAGGCTGGAGCTaGCGGCTTAGTCTTCATGATGTAGAACATGATGAT | + |
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Preference number: 6 (lower is better) Translates to: ALSWGTATAGWS*RLSLHDVEHDD Trigger: ATCATCATGTTCTACATCATGAAGACTAAGCCGTCAGCTCCAGCCTGCTGTAGCAGTCCCCCAGGAAAGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| CDS CCA 72 bp | AGAGACAGGAGTAGCAGACCATGCCATAGATGTTCCTaGGTCTGTTTTCCAGCATGTAGTAGCCAGGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: RDRSSRPCHRCS*VCFPACSSQGD Trigger: GTCTCCCTGGCTACTACATGCTGGAAAACAGACCCAGGAACATCTATGGCATGGTCTGCTACTCCTGTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| CDS CCA 72 bp | ACTGCTCGTTCTCAGAGGAGGCATCATTCTCACTTTTaGGGGTCTTTGTGGGTGTTGCTGTCAGCTTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: TARSQRRHHSHF*GSLWVLLSASG Trigger: TCCAGAAGCTGACAGCAACACCCACAAAGACCCCCAAAAGTGAGAATGATGCCTCCTCTGAGAACGAGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| CDS CAA 72 bp | AGGTGGCGCCATGTTTTCACGACCGCCTTCTCAGAGTaGTATGTAGAGCTGAGCATTCGGCTTGTCTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: RWRHVFTTAFSE*YVELSIRLVFS Trigger: TGAGAAGACAAGCCGAATGCTCAGCTCTACATACAACTCTGAGAAGGCGGTCGTGAAAACATGGCGCCACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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| CDS GCA 72 bp | GGCTCTTCATCACTGTCCACACTGCGACTTAGCAACTaGTCGTTCTCAGAGGAGGCATCATTCTCACTTTTG | + |
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Preference number: 6 (lower is better) Translates to: GSSSLSTLRLSN*SFSEEASFSLL Trigger: CAAAAGTGAGAATGATGCCTCCTCTGAGAACGAGCAGTTGCTAAGTCGCAGTGTGGACAGTGATGAAGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003312.5 |
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