RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EDA (Mus musculus)

Ensembl gene IDs: ENSMUSG00000059327

Ensembl transcript IDs: ENSMUST00000071453.3, ENSMUST00000113775.8, ENSMUST00000113776.8, ENSMUST00000113777.8, ENSMUST00000113778.8, ENSMUST00000113779.8, ENSMUST00000113780.8, ENSMUST00000113781.8, ENSMUST00000113783.8

Found 538 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACACAGCAGCACTTAGAGGTTCTGGGAGTCCTGGCTCCCAAACCTaGGGCAGGGGCATGGGCCAGGATGGAATGGGAGAATCTAGGATG +
Preference number: 1 (lower is better)
Translates to: HTAALRGSGSPGSQT*GRGMGQDGMGESRM
Trigger: CATCCTAGATTCTCCCATTCCATCCTGGCCCATGCCCCTGCCCCAGGTTTGGGAGCCAGGACTCCCAGAACCTCTAAGTGCTGCTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
3UTR GCA 90 bp GATGCAGGGGCTTCGCCCAGCCTGATGGCCCCGAAGAAGGTGGTGTaGTTGCTCATATTGATAGAGATGTCAGCGTGCACCATCTTCACG +
Preference number: 1 (lower is better)
Translates to: DAGASPSLMAPKKVV*LLILIEMSACTIFT
Trigger: CGTGAAGATGGTGCACGCTGACATCTCTATCAATATGAGCAAGCACACCACCTTCTTCGGGGCCATCAGGCTGGGCGAAGCCCCTGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
3UTR CCA 90 bp TCAGGTTCTGTAGTAGGCATGGCCCAGGGAAAGCCCAGGCAAGGGTaGGACCTCAGGCAACACAAGAGAAGCCTAAAATCTGTCTGGCTC +
Preference number: 1 (lower is better)
Translates to: SGSVVGMAQGKPRQG*DLRQHKRSLKSVWL
Trigger: GAGCCAGACAGATTTTAGGCTTCTCTTGTGTTGCCTGAGGTCCCACCCTTGCCTGGGCTTTCCCTGGGCCATGCCTACTACAGAACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR TCA 90 bp AGATGTCAGCGTGCACCATCTTCACGGCGATTTTCTGCCTGGCCTTaGGGAGGCACACGCCTGCAGTATAGCAAGTGTTGTAGTTGGTCT +
Preference number: 1 (lower is better)
Translates to: RCQRAPSSRRFSAWP*GGTRLQYSKCCSWS
Trigger: AGACCAACTACAACACTTGCTATACTGCAGGCGTGTGCCTCCTCAAGGCCAGGCAGAAAATCGCCGTGAAGATGGTGCACGCTGACATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
3UTR CCA 90 bp TGGTCATTCCTGCATGATTCCAAGCCAAAGCAAAGTTCCCAGCTCTaGAGTCCAGCAAGCTGCCACAGTATACCTCTCAGCCTGAGTGGG +
Preference number: 1 (lower is better)
Translates to: WSFLHDSKPKQSSQL*SPASCHSIPLSLSG
Trigger: CCCACTCAGGCTGAGAGGTATACTGTGGCAGCTTGCTGGACTCCAGAGCTGGGAACTTTGCTTTGGCTTGGAATCATGCAGGAATGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CCA 90 bp AGAAGGTTCTGCTTCTTGACAACCCTGGGGCTCCGTCAACTGTCCTaGCAACTCAAGGTCTTTCTGGGAAGTCACATAGGCCTTGTCATC +
Preference number: 1 (lower is better)
Translates to: RRFCFLTTLGLRQLS*QLKVFLGSHIGLVI
Trigger: GATGACAAGGCCTATGTGACTTCCCAGAAAGACCTTGAGTTGCCAGGACAGTTGACGGAGCCCCAGGGTTGTCAAGAAGCAGAACCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CCA 90 bp TGCTCAATAGCAGACAGATGCTCTAGGAAAGCACCGCAGAAAGACTaGGCTAGTGGGCCATGGCCTGCTGCTCTTTCAGATAAGAGCTTG +
Preference number: 1 (lower is better)
Translates to: CSIADRCSRKAPQKD*ASGPWPAALSDKSL
Trigger: CAAGCTCTTATCTGAAAGAGCAGCAGGCCATGGCCCACTAGCCCAGTCTTTCTGCGGTGCTTTCCTAGAGCATCTGTCTGCTATTGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CCA 90 bp GGAACCGGCTGGACCAGGTTGATCCTTCCAGCTTTAGGCTGTGCCTaGTACCCTGAAGCTAGGCAATTGGAAAGAAGTCTCATGAACCTA +
Preference number: 1 (lower is better)
Translates to: GTGWTRLILPALGCA*YPEARQLERSLMNL
Trigger: TAGGTTCATGAGACTTCTTTCCAATTGCCTAGCTTCAGGGTACCAGGCACAGCCTAAAGCTGGAAGGATCAACCTGGTCCAGCCGGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CCA 90 bp CCCCACATAGCAGCTCGTTGTGTGATGGTTGCTGCTTTTATCAGATaGGTGAAAGGTCATGAAGGCTCCAAGTTCTGTGGGTCCCAGAGC +
Preference number: 1 (lower is better)
Translates to: PHIAARCVMVAAFIR*VKGHEGSKFCGSQS
Trigger: GCTCTGGGACCCACAGAACTTGGAGCCTTCATGACCTTTCACCCATCTGATAAAAGCAGCAACCATCACACAACGAGCTGCTATGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR TCA 90 bp AGGATTCAGGATGAAGACAGGGTAGTGAGAAGCCCACTTCCCCTATaGTCTCCAAGCACAGAGCATATGATGGGGTTGGCATGTCCTGCA +
Preference number: 1 (lower is better)
Translates to: RIQDEDRVVRSPLPL*SPSTEHMMGLACPA
Trigger: TGCAGGACATGCCAACCCCATCATATGCTCTGTGCTTGGAGATCATAGGGGAAGTGGGCTTCTCACTACCCTGTCTTCATCCTGAATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR GCA 90 bp GATTCCAAGCCAAAGCAAAGTTCCCAGCTCTGGAGTCCAGCAAGCTaGCACAGTATACCTCTCAGCCTGAGTGGGAAGTTTTCTTTGAGC +
Preference number: 1 (lower is better)
Translates to: DSKPKQSSQLWSPAS*HSIPLSLSGKFSLS
Trigger: GCTCAAAGAAAACTTCCCACTCAGGCTGAGAGGTATACTGTGGCAGCTTGCTGGACTCCAGAGCTGGGAACTTTGCTTTGGCTTGGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CCA 90 bp AGATGCTCTAGGAAAGCACCGCAGAAAGACTGGGCTAGTGGGCCATaGCCTGCTGCTCTTTCAGATAAGAGCTTGGGTCTCAACAAAAGT +
Preference number: 1 (lower is better)
Translates to: RCSRKAPQKDWASGP*PAALSDKSLGLNKS
Trigger: ACTTTTGTTGAGACCCAAGCTCTTATCTGAAAGAGCAGCAGGCCATGGCCCACTAGCCCAGTCTTTCTGCGGTGCTTTCCTAGAGCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CCA 90 bp AGCATTGGGCCTGCTCCAGGCCATTCTCCCCTTATCCTCATCAGCTaGAAGCTTTTTGAAGAAAGAAATGACACACCTCACGCTCTCCTG +
Preference number: 1 (lower is better)
Translates to: SIGPAPGHSPLILIS*KLFEERNDTPHALL
Trigger: CAGGAGAGCGTGAGGTGTGTCATTTCTTTCTTCAAAAAGCTTCCAGCTGATGAGGATAAGGGGAGAATGGCCTGGAGCAGGCCCAATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CCA 90 bp TATACACAGTATCTCACACAGGATGCTGATTCCCCAAAGCAGCATTaGGCCTGCTCCAGGCCATTCTCCCCTTATCCTCATCAGCTGGAA +
Preference number: 1 (lower is better)
Translates to: YTQYLTQDADSPKQH*ACSRPFSPYPHQLE
Trigger: TTCCAGCTGATGAGGATAAGGGGAGAATGGCCTGGAGCAGGCCCAATGCTGCTTTGGGGAATCAGCATCCTGTGTGAGATACTGTGTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR TCA 90 bp GCAGAGATTAGGCTCAGGATGGGTCCAGGGGCAACTAAGGCAAAATaGTACATCTTCCAGGGAACCAGTAGCCACATAACATCTAGCAGG +
Preference number: 1 (lower is better)
Translates to: AEIRLRMGPGATKAK*YIFQGTSSHITSSR
Trigger: CCTGCTAGATGTTATGTGGCTACTGGTTCCCTGGAAGATGTATCATTTTGCCTTAGTTGCCCCTGGACCCATCCTGAGCCTAATCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CCA 90 bp ACTGGGCTAGTGGGCCATGGCCTGCTGCTCTTTCAGATAAGAGCTTaGGTCTCAACAAAAGTGGACAACATTTCCTGTTCTATCCCCACT +
Preference number: 1 (lower is better)
Translates to: TGLVGHGLLLFQIRA*VSTKVDNISCSIPT
Trigger: AGTGGGGATAGAACAGGAAATGTTGTCCACTTTTGTTGAGACCCAAGCTCTTATCTGAAAGAGCAGCAGGCCATGGCCCACTAGCCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CCA 90 bp CATCTCCTCAAAAAGAAATACATTTCAGGAGCAAGAGGAACCGGCTaGACCAGGTTGATCCTTCCAGCTTTAGGCTGTGCCTGGTACCCT +
Preference number: 1 (lower is better)
Translates to: HLLKKKYISGARGTG*TRLILPALGCAWYP
Trigger: AGGGTACCAGGCACAGCCTAAAGCTGGAAGGATCAACCTGGTCCAGCCGGTTCCTCTTGCTCCTGAAATGTATTTCTTTTTGAGGAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CCA 90 bp GCAGGGGCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCATGTaGCTTTGGAATGGTGCTCTTAGGTTTTCCCTCCATTCTCGGGAG +
Preference number: 1 (lower is better)
Translates to: AGAQLGNFLYFSIAM*LWNGALRFSLHSRE
Trigger: CTCCCGAGAATGGAGGGAAAACCTAAGAGCACCATTCCAAAGCCACATGGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGCCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CCA 90 bp ACCAGTAGCCACATAACATCTAGCAGGTACAATTTTGTGCCAGCTTaGCTTTTGAAGCTCAAGCAGCTGGTAGAGGCTCCTGCGGTGCAA +
Preference number: 1 (lower is better)
Translates to: TSSHITSSRYNFVPA*LLKLKQLVEAPAVQ
Trigger: TTGCACCGCAGGAGCCTCTACCAGCTGCTTGAGCTTCAAAAGCCAAGCTGGCACAAAATTGTACCTGCTAGATGTTATGTGGCTACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR GCA 90 bp CCTATGATCTCCAAGCACAGAGCATATGATGGGGTTGGCATGTCCTaGAGGGGCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCAT +
Preference number: 1 (lower is better)
Translates to: PMISKHRAYDGVGMS*RGTVRKLPLFLHSH
Trigger: ATGGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCCAACCCCATCATATGCTCTGTGCTTGGAGATCATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CCA 90 bp TCCTGGAGTCACTGGGGAATAAATAGCATGGGGCATTTCTCTTTGTaGCTGCAACGCCAGTATACCTCATTCCACACACAGCAGCACTTA +
Preference number: 1 (lower is better)
Translates to: SWSHWGINSMGHFSL*LQRQYTSFHTQQHL
Trigger: TAAGTGCTGCTGTGTGTGGAATGAGGTATACTGGCGTTGCAGCCACAAAGAGAAATGCCCCATGCTATTTATTCCCCAGTGACTCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CCA 90 bp GCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCATGTGGCTTTaGAATGGTGCTCTTAGGTTTTCCCTCCATTCTCGGGAGGGCAAC +
Preference number: 1 (lower is better)
Translates to: AQLGNFLYFSIAMWL*NGALRFSLHSREGN
Trigger: GTTGCCCTCCCGAGAATGGAGGGAAAACCTAAGAGCACCATTCCAAAGCCACATGGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR GCA 90 bp AGCAAGAATGCCTCTTCTGTCAAGGATATTGACTTGGTAGGTTATTaGCCAGGTCTTTGCCACAAGGACTTGCCTTCTTCTGACCTGACC +
Preference number: 1 (lower is better)
Translates to: SKNASSVKDIDLVGY*PGLCHKDLPSSDLT
Trigger: GGTCAGGTCAGAAGAAGGCAAGTCCTTGTGGCAAAGACCTGGGCAATAACCTACCAAGTCAATATCCTTGACAGAAGAGGCATTCTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR TCA 90 bp CATTTTAGTGCAACAAATGATACATCTGATGAGGGACCTAAGGGTTaGGGAGTCACCATAAGCCAGTCAGCAGGGAGCCTAAGAAGGTTC +
Preference number: 1 (lower is better)
Translates to: HFSATNDTSDEGPKG*GVTISQSAGSLRRF
Trigger: GAACCTTCTTAGGCTCCCTGCTGACTGGCTTATGGTGACTCCTCAACCCTTAGGTCCCTCATCAGATGTATCATTTGTTGCACTAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR TCA 90 bp CCAAATATAGCTTCTTACATAGGCATGCATGTGGTCATTCCTGCATaGTTCCAAGCCAAAGCAAAGTTCCCAGCTCTGGAGTCCAGCAAG +
Preference number: 1 (lower is better)
Translates to: PNIASYIGMHVVIPA*FQAKAKFPALESSK
Trigger: CTTGCTGGACTCCAGAGCTGGGAACTTTGCTTTGGCTTGGAATCATGCAGGAATGACCACATGCATGCCTATGTAAGAAGCTATATTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR TCA 90 bp CTTCAAACACTAAGGAGAGGGTCTGTTAGTTCTTGCTACCACTGCTaGTTGTTCAAGGCCTCCAAGGGCAGATGCATGTCTAAAATCGAC +
Preference number: 1 (lower is better)
Translates to: LQTLRRGSVSSCYHC*LFKASKGRCMSKID
Trigger: GTCGATTTTAGACATGCATCTGCCCTTGGAGGCCTTGAACAATCAGCAGTGGTAGCAAGAACTAACAGACCCTCTCCTTAGTGTTTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR GCA 90 bp TCTTCTGTCAAGGATATTGACTTGGTAGGTTATTGCCCAGGTCTTTaGCACAAGGACTTGCCTTCTTCTGACCTGACCCTCTCCTTAAGT +
Preference number: 1 (lower is better)
Translates to: SSVKDIDLVGYCPGL*HKDLPSSDLTLSLS
Trigger: ACTTAAGGAGAGGGTCAGGTCAGAAGAAGGCAAGTCCTTGTGGCAAAGACCTGGGCAATAACCTACCAAGTCAATATCCTTGACAGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR GCA 90 bp TGTGCCAGCTTGGCTTTTGAAGCTCAAGCAGCTGGTAGAGGCTCCTaGGGTGCAATTTTTCTTCTAACATGTCATCTGCTTACACAAACA +
Preference number: 1 (lower is better)
Translates to: CASLAFEAQAAGRGS*GAIFLLTCHLLTQT
Trigger: TGTTTGTGTAAGCAGATGACATGTTAGAAGAAAAATTGCACCGCAGGAGCCTCTACCAGCTGCTTGAGCTTCAAAAGCCAAGCTGGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR TCA 90 bp AGGCAGTACCATAGCATTGCTAGGTTTCTCCCTAGGACTCTGCCATaGTATCAGTTCCATGTGATCACTTTTAATTTTTCTTTCGGAACC +
Preference number: 1 (lower is better)
Translates to: RQYHSIARFLPRTLP*YQFHVITFNFSFGT
Trigger: GGTTCCGAAAGAAAAATTAAAAGTGATCACATGGAACTGATATCATGGCAGAGTCCTAGGGAGAAACCTAGCAATGCTATGGTACTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR GCA 90 bp GGACATCAATTGCATATGAGTAACAGGATGGGATGTAGGTTGGGCTaGATTCCCTCTAAAAGCCTTTCTAGGTCAAAGATTTCTCTACAT +
Preference number: 1 (lower is better)
Translates to: GHQLHMSNRMGCRLG*IPSKSLSRSKISLH
Trigger: ATGTAGAGAAATCTTTGACCTAGAAAGGCTTTTAGAGGGAATGCAGCCCAACCTACATCCCATCCTGTTACTCATATGCAATTGATGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp CTGCTGAGTCTGGAGGTGGGGGCCTGCCTGCACACTGTCCTAGGTGGGCCAGTTGCACCGCAGAAAGACTaGGCTAGTGGGCCATGGCCT +
Preference number: 2 (lower is better)
Translates to: LLSLEVGACLHTVLGGPVAPQKD*ASGPWP
Trigger: AGGCCATGGCCCACTAGCCCAGTCTTTCTGCGGTGC...AACTGGCCCACCTAGGACAGTGTGCAGGCAGGCCCCCACCTCCAGACTCAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp TTCTGTAGTAGGCATGGCCCAGGGAAAGCCCAGGCAAGGGTGGGACCTCAGGCAGCACCGCAGAAAGACTaGGCTAGTGGGCCATGGCCT +
Preference number: 2 (lower is better)
Translates to: FCSRHGPGKAQARVGPQAAPQKD*ASGPWP
Trigger: AGGCCATGGCCCACTAGCCCAGTCTTTCTGCGGTGC...TGCCTGAGGTCCCACCCTTGCCTGGGCTTTCCCTGGGCCATGCCTACTACAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp CTGCTGAGTCTGGAGGTGGGGGCCTGCCTGCACACTGTCCTAGGTGGGCCAGTTTGGAGTCCAGCAAGCTaGCACAGTATACCTCTCAGC +
Preference number: 2 (lower is better)
Translates to: LLSLEVGACLHTVLGGPVWSPAS*HSIPLS
Trigger: GCTGAGAGGTATACTGTGGCAGCTTGCTGGACTCCA...AACTGGCCCACCTAGGACAGTGTGCAGGCAGGCCCCCACCTCCAGACTCAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp CAAATCAGGTTCTGTAGTAGGCATGGCCCAGGGAAAGCCCAGGCAAGGGTGGGACTGGAGGTGGGGGCCTaGCTGCACACTGTCCTAGGT +
Preference number: 2 (lower is better)
Translates to: QIRFCSRHGPGKAQARVGLEVGA*LHTVLG
Trigger: ACCTAGGACAGTGTGCAGGCAGGCCCCCACCTCCAG...TCCCACCCTTGCCTGGGCTTTCCCTGGGCCATGCCTACTACAGAACCTGATTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp TTCTGTAGTAGGCATGGCCCAGGGAAAGCCCAGGCAAGGGTGGGACCTCAGGCAAAGCAGCATTGGGCCTaGTCCAGGCCATTCTCCCCT +
Preference number: 2 (lower is better)
Translates to: FCSRHGPGKAQARVGPQAKQHWA*SRPFSP
Trigger: AGGGGAGAATGGCCTGGAGCAGGCCCAATGCTGCTT...TGCCTGAGGTCCCACCCTTGCCTGGGCTTTCCCTGGGCCATGCCTACTACAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp TATTGCCCAGGTCTTTGCCACAAGGACTTGCCTTCTTCTGACCTGACCCTCTCCCCTGGCTCCCAAACCTaGGGCAGGGGCATGGGCCAG +
Preference number: 2 (lower is better)
Translates to: YCPGLCHKDLPSSDLTLSPGSQT*GRGMGQ
Trigger: CTGGCCCATGCCCCTGCCCCAGGTTTGGGAGCCAGG...GGAGAGGGTCAGGTCAGAAGAAGGCAAGTCCTTGTGGCAAAGACCTGGGCAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CAA 90 bp GCAGGGGCTTCGCCCAGCCTGATGGCCCCGAAGAAGGTGGTGTGCTaGCTCATATTGATAGAGATGTCAGCGTGCACCATCTTCACGGCG +
Preference number: 2 (lower is better)
Translates to: AGASPSLMAPKKVVC*LILIEMSACTIFTA
Trigger: CGCCGTGAAGATGGTGCACGCTGACATCTCTATCAATATGAGCAAGCACACCACCTTCTTCGGGGCCATCAGGCTGGGCGAAGCCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
3UTR-3UTR TCA 90 bp CTGCTGAGTCTGGAGGTGGGGGCCTGCCTGCACACTGTCCTAGGTGGGCCAGTTTCTTGCTACCACTGCTaGTTGTTCAAGGCCTCCAAG +
Preference number: 2 (lower is better)
Translates to: LLSLEVGACLHTVLGGPVSCYHC*LFKASK
Trigger: CTTGGAGGCCTTGAACAATCAGCAGTGGTAGCAAGA...AACTGGCCCACCTAGGACAGTGTGCAGGCAGGCCCCCACCTCCAGACTCAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp GGGGCTTCGCCCAGCCTGATGGCCCCGAAGAAGGTGGTGTGCTTGCTCATATTGTCTCAATGCTGCGGGTaGACTGCAGGAAGGGCTTCT +
Preference number: 2 (lower is better)
Translates to: GASPSLMAPKKVVCLLILSQCCG*TAGRAS
Trigger: AGAAGCCCTTCCTGCAGTGCACCCGCAGCATTGAGA...CAATATGAGCAAGCACACCACCTTCTTCGGGGCCATCAGGCTGGGCGAAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
3UTR-3UTR TCA 90 bp ACCAGGTTGATCCTTCCAGCTTTAGGCTGTGCCTGGTACCCTGAAGCTAGGCAAGACTGGGGTGGGTGGTaGCAGGTGGGAAGACTCCAG +
Preference number: 2 (lower is better)
Translates to: TRLILPALGCAWYPEARQDWGGW*QVGRLQ
Trigger: CTGGAGTCTTCCCACCTGTCACCACCCACCCCAGTC...TTGCCTAGCTTCAGGGTACCAGGCACAGCCTAAAGCTGGAAGGATCAACCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp TTCTGTAGTAGGCATGGCCCAGGGAAAGCCCAGGCAAGGGTGGGACCTCAGGCATGGGACAGGTTGCTTTaGCTCCTTCTCCTGCTGAGT +
Preference number: 2 (lower is better)
Translates to: FCSRHGPGKAQARVGPQAWDRLL*LLLLLS
Trigger: ACTCAGCAGGAGAAGGAGGCAAAGCAACCTGTCCCA...TGCCTGAGGTCCCACCCTTGCCTGGGCTTTCCCTGGGCCATGCCTACTACAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp CAAATCAGGTTCTGTAGTAGGCATGGCCCAGGGAAAGCCCAGGCAAGGGTGGGAATGCTGCGGGTGCACTaGAGGAAGGGCTTCTCATCC +
Preference number: 2 (lower is better)
Translates to: QIRFCSRHGPGKAQARVGMLRVH*RKGFSS
Trigger: GGATGAGAAGCCCTTCCTGCAGTGCACCCGCAGCAT...TCCCACCCTTGCCTGGGCTTTCCCTGGGCCATGCCTACTACAGAACCTGATTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
3UTR-3UTR CCA 90 bp TTCTGTAGTAGGCATGGCCCAGGGAAAGCCCAGGCAAGGGTGGGACCTCAGGCAGCTTTAGGCTGTGCCTaGTACCCTGAAGCTAGGCAA +
Preference number: 2 (lower is better)
Translates to: FCSRHGPGKAQARVGPQAALGCA*YPEARQ
Trigger: TTGCCTAGCTTCAGGGTACCAGGCACAGCCTAAAGC...TGCCTGAGGTCCCACCCTTGCCTGGGCTTTCCCTGGGCCATGCCTACTACAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp CTGCTGAGTCTGGAGGTGGGGGCCTGCCTGCACACTGTCCTAGGTGGGCCAGTTAAGCAATGTGGCTACTaGGAAATGGAGGTACAGCTG +
Preference number: 2 (lower is better)
Translates to: LLSLEVGACLHTVLGGPVKQCGY*EMEVQL
Trigger: CAGCTGTACCTCCATTTCCCAGTAGCCACATTGCTT...AACTGGCCCACCTAGGACAGTGTGCAGGCAGGCCCCCACCTCCAGACTCAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp TTCTGTAGTAGGCATGGCCCAGGGAAAGCCCAGGCAAGGGTGGGACCTCAGGCAAGCCTAAGAAGGTTCTaGTTCTTGACAACCCTGGGG +
Preference number: 2 (lower is better)
Translates to: FCSRHGPGKAQARVGPQASLRRF*FLTTLG
Trigger: CCCCAGGGTTGTCAAGAAGCAGAACCTTCTTAGGCT...TGCCTGAGGTCCCACCCTTGCCTGGGCTTTCCCTGGGCCATGCCTACTACAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp GTCAGCAGGGAGCCTAAGAAGGTTCTGCTTCTTGACAACCCTGGGGCTCCGTCATTCACGGCGATTTTCTaGCTGGCCTTGAGGAGGCAC +
Preference number: 2 (lower is better)
Translates to: VSREPKKVLLLDNPGAPSFTAIF*LALRRH
Trigger: GTGCCTCCTCAAGGCCAGGCAGAAAATCGCCGTGAA...TGACGGAGCCCCAGGGTTGTCAAGAAGCAGAACCTTCTTAGGCTCCCTGCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
3UTR-3UTR CCA 90 bp GTAACAGGATGGGATGTAGGTTGGGCTGCATTCCCTCTAAAAGCCTTTCTAGGTCCTGGCTCCCAAACCTaGGGCAGGGGCATGGGCCAG +
Preference number: 2 (lower is better)
Translates to: VTGWDVGWAAFPLKAFLGPGSQT*GRGMGQ
Trigger: CTGGCCCATGCCCCTGCCCCAGGTTTGGGAGCCAGG...ACCTAGAAAGGCTTTTAGAGGGAATGCAGCCCAACCTACATCCCATCCTGTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp ACCAGGTTGATCCTTCCAGCTTTAGGCTGTGCCTGGTACCCTGAAGCTAGGCAAAGGTTCTGGGAGTCCTaGCTCCCAAACCTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: TRLILPALGCAWYPEARQRFWES*LPNLGQ
Trigger: CTGCCCCAGGTTTGGGAGCCAGGACTCCCAGAACCT...TTGCCTAGCTTCAGGGTACCAGGCACAGCCTAAAGCTGGAAGGATCAACCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp CAAATCAGGTTCTGTAGTAGGCATGGCCCAGGGAAAGCCCAGGCAAGGGTGGGAAAAGAGGAGGCCCCATaGGACAGGTTGCTTTGCCTC +
Preference number: 2 (lower is better)
Translates to: QIRFCSRHGPGKAQARVGKEEAP*DRLLCL
Trigger: GAGGCAAAGCAACCTGTCCCATGGGGCCTCCTCTTT...TCCCACCCTTGCCTGGGCTTTCCCTGGGCCATGCCTACTACAGAACCTGATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp CAAATCAGGTTCTGTAGTAGGCATGGCCCAGGGAAAGCCCAGGCAAGGGTGGGAGGACTTGCCTTCTTCTaGCCTGACCCTCTCCTTAAG +
Preference number: 2 (lower is better)
Translates to: QIRFCSRHGPGKAQARVGGLAFF*PDPLLK
Trigger: CTTAAGGAGAGGGTCAGGTCAGAAGAAGGCAAGTCC...TCCCACCCTTGCCTGGGCTTTCCCTGGGCCATGCCTACTACAGAACCTGATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp TATACACAGTATCTCACACAGGATGCTGATTCCCCAAAGCAGCATTGGGCCTGCGACTGGGGTGGGTGGTaGCAGGTGGGAAGACTCCAG +
Preference number: 2 (lower is better)
Translates to: YTQYLTQDADSPKQHWACDWGGW*QVGRLQ
Trigger: CTGGAGTCTTCCCACCTGTCACCACCCACCCCAGTC...GCAGGCCCAATGCTGCTTTGGGGAATCAGCATCCTGTGTGAGATACTGTGTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp TTCTGTAGTAGGCATGGCCCAGGGAAAGCCCAGGCAAGGGTGGGACCTCAGGCATGTGAGGATTCAGGATaGAGACAGGGTAGTGAGAAG +
Preference number: 2 (lower is better)
Translates to: FCSRHGPGKAQARVGPQACEDSG*RQGSEK
Trigger: CTTCTCACTACCCTGTCTTCATCCTGAATCCTCACA...TGCCTGAGGTCCCACCCTTGCCTGGGCTTTCCCTGGGCCATGCCTACTACAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp CAAATCAGGTTCTGTAGTAGGCATGGCCCAGGGAAAGCCCAGGCAAGGGTGGGATGGAGTCCAGCAAGCTaGCACAGTATACCTCTCAGC +
Preference number: 2 (lower is better)
Translates to: QIRFCSRHGPGKAQARVGWSPAS*HSIPLS
Trigger: GCTGAGAGGTATACTGTGGCAGCTTGCTGGACTCCA...TCCCACCCTTGCCTGGGCTTTCCCTGGGCCATGCCTACTACAGAACCTGATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp AGCCTAAGAAGGTTCTGCTTCTTGACAACCCTGGGGCTCCGTCAACTGTCCTGGTCTCAATGCTGCGGGTaGACTGCAGGAAGGGCTTCT +
Preference number: 2 (lower is better)
Translates to: SLRRFCFLTTLGLRQLSWSQCCG*TAGRAS
Trigger: AGAAGCCCTTCCTGCAGTGCACCCGCAGCATTGAGA...CCAGGACAGTTGACGGAGCCCCAGGGTTGTCAAGAAGCAGAACCTTCTTAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
3UTR-3UTR CCA 90 bp GAACCTAGCATAAGACAATGCAGGAAAACTGGTGGAGGTGCCTTTGGATCTGAACCTGGCTCCCAAACCTaGGGCAGGGGCATGGGCCAG +
Preference number: 2 (lower is better)
Translates to: EPSIRQCRKTGGGAFGSEPGSQT*GRGMGQ
Trigger: CTGGCCCATGCCCCTGCCCCAGGTTTGGGAGCCAGG...TTCAGATCCAAAGGCACCTCCACCAGTTTTCCTGCATTGTCTTATGCTAGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp TCCAAGGGCAGATGCATGTCTAAAATCGACCTCATTTCTGGTTGTAAGGCTGTCCCTGGCTCCCAAACCTaGGGCAGGGGCATGGGCCAG +
Preference number: 2 (lower is better)
Translates to: SKGRCMSKIDLISGCKAVPGSQT*GRGMGQ
Trigger: CTGGCCCATGCCCCTGCCCCAGGTTTGGGAGCCAGG...GACAGCCTTACAACCAGAAATGAGGTCGATTTTAGACATGCATCTGCCCTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp GCATGGGGCATTTCTCTTTGTGGCTGCAACGCCAGTATACCTCATTCCACACACAGGTTCTGGGAGTCCTaGCTCCCAAACCTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: AWGISLCGCNASIPHSTHRFWES*LPNLGQ
Trigger: CTGCCCCAGGTTTGGGAGCCAGGACTCCCAGAACCT...GTGTGTGGAATGAGGTATACTGGCGTTGCAGCCACAAAGAGAAATGCCCCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp CTGCTGAGTCTGGAGGTGGGGGCCTGCCTGCACACTGTCCTAGGTGGGCCAGTTTTCCAAAATTTACTGTaGCAGGTAACTGCTGAGTGC +
Preference number: 2 (lower is better)
Translates to: LLSLEVGACLHTVLGGPVFQNLL*QVTAEC
Trigger: GCACTCAGCAGTTACCTGCCACAGTAAATTTTGGAA...AACTGGCCCACCTAGGACAGTGTGCAGGCAGGCCCCCACCTCCAGACTCAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CAA 90 bp TCGCCCAGCCTGATGGCCCCGAAGAAGGTGGTGTGCTTGCTCATATaGATAGAGATGTCAGCGTGCACCATCTTCACGGCGATTTTCTGC +
Preference number: 2 (lower is better)
Translates to: SPSLMAPKKVVCLLI*IEMSACTIFTAIFC
Trigger: GCAGAAAATCGCCGTGAAGATGGTGCACGCTGACATCTCTATCAATATGAGCAAGCACACCACCTTCTTCGGGGCCATCAGGCTGGGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
3UTR-3UTR TCA 90 bp GCACAAATATCTTGGGGGACTATGTGTGGGGAGGCAAGTTGTGATGGAGATTGTGACTGGGGTGGGTGGTaGCAGGTGGGAAGACTCCAG +
Preference number: 2 (lower is better)
Translates to: AQISWGTMCGEASCDGDCDWGGW*QVGRLQ
Trigger: CTGGAGTCTTCCCACCTGTCACCACCCACCCCAGTC...ACAATCTCCATCACAACTTGCCTCCCCACACATAGTCCCCCAAGATATTTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp CAAATCAGGTTCTGTAGTAGGCATGGCCCAGGGAAAGCCCAGGCAAGGGTGGGATCTTGCTACCACTGCTaGTTGTTCAAGGCCTCCAAG +
Preference number: 2 (lower is better)
Translates to: QIRFCSRHGPGKAQARVGSCYHC*LFKASK
Trigger: CTTGGAGGCCTTGAACAATCAGCAGTGGTAGCAAGA...TCCCACCCTTGCCTGGGCTTTCCCTGGGCCATGCCTACTACAGAACCTGATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp CTGCTGAGTCTGGAGGTGGGGGCCTGCCTGCACACTGTCCTAGGTGGGCCAGTTGACATCAATTGCATATaGGTAACAGGATGGGATGTA +
Preference number: 2 (lower is better)
Translates to: LLSLEVGACLHTVLGGPVDINCI*VTGWDV
Trigger: TACATCCCATCCTGTTACTCATATGCAATTGATGTC...AACTGGCCCACCTAGGACAGTGTGCAGGCAGGCCCCCACCTCCAGACTCAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp GTTCTTGCTACCACTGCTGATTGTTCAAGGCCTCCAAGGGCAGATGCATGTCTATTTTCTGCCTGGCCTTaGGGAGGCACACGCCTGCAG +
Preference number: 2 (lower is better)
Translates to: VLATTADCSRPPRADACLFSAWP*GGTRLQ
Trigger: CTGCAGGCGTGTGCCTCCTCAAGGCCAGGCAGAAAA...TAGACATGCATCTGCCCTTGGAGGCCTTGAACAATCAGCAGTGGTAGCAAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
3UTR-3UTR GCA 90 bp CCTGTGGCAGCCAAGAGACTAGGCAGTACCATAGCATTGCTAGGTTTCTCCCTATCCCTGTCTCAATGCTaGGGGTGCACTGCAGGAAGG +
Preference number: 2 (lower is better)
Translates to: PVAAKRLGSTIALLGFSLSLSQC*GCTAGR
Trigger: CCTTCCTGCAGTGCACCCGCAGCATTGAGACAGGGA...TAGGGAGAAACCTAGCAATGCTATGGTACTGCCTAGTCTCTTGGCTGCCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
3UTR-3UTR CCA 90 bp GCTACCACTGCTGATTGTTCAAGGCCTCCAAGGGCAGATGCATGTCTAAAATCGAGGTTCTGGGAGTCCTaGCTCCCAAACCTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: ATTADCSRPPRADACLKSRFWES*LPNLGQ
Trigger: CTGCCCCAGGTTTGGGAGCCAGGACTCCCAGAACCT...CGATTTTAGACATGCATCTGCCCTTGGAGGCCTTGAACAATCAGCAGTGGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp TATACACAGTATCTCACACAGGATGCTGATTCCCCAAAGCAGCATTGGGCCTGCAGGTTCTGGGAGTCCTaGCTCCCAAACCTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: YTQYLTQDADSPKQHWACRFWES*LPNLGQ
Trigger: CTGCCCCAGGTTTGGGAGCCAGGACTCCCAGAACCT...GCAGGCCCAATGCTGCTTTGGGGAATCAGCATCCTGTGTGAGATACTGTGTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp CATATGATGGGGTTGGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATGCACCGCAGAAAGACTaGGCTAGTGGGCCATGGCCT +
Preference number: 2 (lower is better)
Translates to: HMMGLACPAGAQLGNFLYAPQKD*ASGPWP
Trigger: AGGCCATGGCCCACTAGCCCAGTCTTTCTGCGGTGC...ATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCCAACCCCATCATATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp AGGGAGTGTAGGGTTTGGGAATTCCAAAATTTACTGTGGCAGGTAACTGCTGAGGACTGGGGTGGGTGGTaGCAGGTGGGAAGACTCCAG +
Preference number: 2 (lower is better)
Translates to: RECRVWEFQNLLWQVTAEDWGGW*QVGRLQ
Trigger: CTGGAGTCTTCCCACCTGTCACCACCCACCCCAGTC...CTCAGCAGTTACCTGCCACAGTAAATTTTGGAATTCCCAAACCCTACACTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp AGCCTAAGAAGGTTCTGCTTCTTGACAACCCTGGGGCTCCGTCAACTGTCCTGGACCCTCTCCTTAAGTTaGAACCTAATGGCACCCCCA +
Preference number: 2 (lower is better)
Translates to: SLRRFCFLTTLGLRQLSWTLSLS*NLMAPP
Trigger: TGGGGGTGCCATTAGGTTGCAACTTAAGGAGAGGGT...CCAGGACAGTTGACGGAGCCCCAGGGTTGTCAAGAAGCAGAACCTTCTTAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp ACCTTGCCCCACATAGCAGCTCGTTGTGTGATGGTTGCTGCTTTTATCAGATGGTGGGAGAATCTAGGATaGAGGGGCTTCGCCCAGCCT +
Preference number: 2 (lower is better)
Translates to: TLPHIAARCVMVAAFIRWWENLG*RGFAQP
Trigger: AGGCTGGGCGAAGCCCCTGCATCCTAGATTCTCCCA...CCATCTGATAAAAGCAGCAACCATCACACAACGAGCTGCTATGTGGGGCAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
3UTR-3UTR CCA 90 bp TCAGATAAGAGCTTGGGTCTCAACAAAAGTGGACAACATTTCCTGTTCTATCCCCCTGGCTCCCAAACCTaGGGCAGGGGCATGGGCCAG +
Preference number: 2 (lower is better)
Translates to: SDKSLGLNKSGQHFLFYPPGSQT*GRGMGQ
Trigger: CTGGCCCATGCCCCTGCCCCAGGTTTGGGAGCCAGG...GGGATAGAACAGGAAATGTTGTCCACTTTTGTTGAGACCCAAGCTCTTATCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp GCACAAATATCTTGGGGGACTATGTGTGGGGAGGCAAGTTGTGATGGAGATTGTAGGTTCTGGGAGTCCTaGCTCCCAAACCTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: AQISWGTMCGEASCDGDCRFWES*LPNLGQ
Trigger: CTGCCCCAGGTTTGGGAGCCAGGACTCCCAGAACCT...ACAATCTCCATCACAACTTGCCTCCCCACACATAGTCCCCCAAGATATTTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp GTTCTTGCTACCACTGCTGATTGTTCAAGGCCTCCAAGGGCAGATGCATGTCTACTAGTCAGACTGGGGTaGGTGGTGACAGGTGGGAAG +
Preference number: 2 (lower is better)
Translates to: VLATTADCSRPPRADACLLVRLG*VVTGGK
Trigger: CTTCCCACCTGTCACCACCCACCCCAGTCTGACTAG...TAGACATGCATCTGCCCTTGGAGGCCTTGAACAATCAGCAGTGGTAGCAAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp AGCTTGGCTTTTGAAGCTCAAGCAGCTGGTAGAGGCTCCTGCGGTGCAATTTTTCTAGTCAGACTGGGGTaGGTGGTGACAGGTGGGAAG +
Preference number: 2 (lower is better)
Translates to: SLAFEAQAAGRGSCGAIFLVRLG*VVTGGK
Trigger: CTTCCCACCTGTCACCACCCACCCCAGTCTGACTAG...AAAAATTGCACCGCAGGAGCCTCTACCAGCTGCTTGAGCTTCAAAAGCCAAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp CCTGTGGCAGCCAAGAGACTAGGCAGTACCATAGCATTGCTAGGTTTCTCCCTAGGACTTGCCTTCTTCTaGCCTGACCCTCTCCTTAAG +
Preference number: 2 (lower is better)
Translates to: PVAAKRLGSTIALLGFSLGLAFF*PDPLLK
Trigger: CTTAAGGAGAGGGTCAGGTCAGAAGAAGGCAAGTCC...TAGGGAGAAACCTAGCAATGCTATGGTACTGCCTAGTCTCTTGGCTGCCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp GGTGCACAAATATCTTGGGGGACTATGTGTGGGGAGGCAAGTTGTGATGGAGATGATTCTGTGGGTGTATaGAAGAGGAGGCCCCATGGG +
Preference number: 2 (lower is better)
Translates to: GAQISWGTMCGEASCDGDDSVGV*KRRPHG
Trigger: CCCATGGGGCCTCCTCTTTCATACACCCACAGAATC...ATCTCCATCACAACTTGCCTCCCCACACATAGTCCCCCAAGATATTTGTGCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp GAACCTAGCATAAGACAATGCAGGAAAACTGGTGGAGGTGCCTTTGGATCTGAATTTTCTGCCTGGCCTTaGGGAGGCACACGCCTGCAG +
Preference number: 2 (lower is better)
Translates to: EPSIRQCRKTGGGAFGSEFSAWP*GGTRLQ
Trigger: CTGCAGGCGTGTGCCTCCTCAAGGCCAGGCAGAAAA...TTCAGATCCAAAGGCACCTCCACCAGTTTTCCTGCATTGTCTTATGCTAGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
3UTR-3UTR GCA 90 bp TTGGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCTTCACGGCGATTTTCTaGCTGGCCTTGAGGAGGCAC +
Preference number: 2 (lower is better)
Translates to: LACPAGAQLGNFLYFSIAFTAIF*LALRRH
Trigger: GTGCCTCCTCAAGGCCAGGCAGAAAATCGCCGTGAA...GGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
3UTR-3UTR CCA 90 bp ACCAGGTTGATCCTTCCAGCTTTAGGCTGTGCCTGGTACCCTGAAGCTAGGCAAGGGCATTTCTCTTTGTaGCTGCAACGCCAGTATACC +
Preference number: 2 (lower is better)
Translates to: TRLILPALGCAWYPEARQGHFSL*LQRQYT
Trigger: GGTATACTGGCGTTGCAGCCACAAAGAGAAATGCCC...TTGCCTAGCTTCAGGGTACCAGGCACAGCCTAAAGCTGGAAGGATCAACCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp TTGGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCCAAAGTTCCCAGCTCTaGAGTCCAGCAAGCTGCCAC +
Preference number: 2 (lower is better)
Translates to: LACPAGAQLGNFLYFSIAQSSQL*SPASCH
Trigger: GTGGCAGCTTGCTGGACTCCAGAGCTGGGAACTTTG...GGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp CATATGATGGGGTTGGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATCAAAGTTCCCAGCTCTaGAGTCCAGCAAGCTGCCAC +
Preference number: 2 (lower is better)
Translates to: HMMGLACPAGAQLGNFLYQSSQL*SPASCH
Trigger: GTGGCAGCTTGCTGGACTCCAGAGCTGGGAACTTTG...ATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCCAACCCCATCATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp CCAGAACTAGTAGCTAGGGTCAGGAATGGAAGACAGAAGACCTTGCCCCACATACAAAGTTCCCAGCTCTaGAGTCCAGCAAGCTGCCAC +
Preference number: 2 (lower is better)
Translates to: PELVARVRNGRQKTLPHIQSSQL*SPASCH
Trigger: GTGGCAGCTTGCTGGACTCCAGAGCTGGGAACTTTG...TATGTGGGGCAAGGTCTTCTGTCTTCCATTCCTGACCCTAGCTACTAGTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp GAACCTAGCATAAGACAATGCAGGAAAACTGGTGGAGGTGCCTTTGGATCTGAAGCACCGCAGAAAGACTaGGCTAGTGGGCCATGGCCT +
Preference number: 2 (lower is better)
Translates to: EPSIRQCRKTGGGAFGSEAPQKD*ASGPWP
Trigger: AGGCCATGGCCCACTAGCCCAGTCTTTCTGCGGTGC...TTCAGATCCAAAGGCACCTCCACCAGTTTTCCTGCATTGTCTTATGCTAGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CAA 90 bp GACTGGGCTAGTGGGCCATGGCCTGCTGCTCTTTCAGATAAGAGCTaGGGTCTCAACAAAAGTGGACAACATTTCCTGTTCTATCCCCAC +
Preference number: 2 (lower is better)
Translates to: DWASGPWPAALSDKS*GLNKSGQHFLFYPH
Trigger: GTGGGGATAGAACAGGAAATGTTGTCCACTTTTGTTGAGACCCAAGCTCTTATCTGAAAGAGCAGCAGGCCATGGCCCACTAGCCCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CAA 90 bp TCCACAGAGCCTGTGGCAGCCAAGAGACTAGGCAGTACCATAGCATaGCTAGGTTTCTCCCTAGGACTCTGCCATGATATCAGTTCCATG +
Preference number: 2 (lower is better)
Translates to: STEPVAAKRLGSTIA*LGFSLGLCHDISSM
Trigger: CATGGAACTGATATCATGGCAGAGTCCTAGGGAGAAACCTAGCAATGCTATGGTACTGCCTAGTCTCTTGGCTGCCACAGGCTCTGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp TATTGCCCAGGTCTTTGCCACAAGGACTTGCCTTCTTCTGACCTGACCCTCTCCGTGGTCATTCCTGCATaGTTCCAAGCCAAAGCAAAG +
Preference number: 2 (lower is better)
Translates to: YCPGLCHKDLPSSDLTLSVVIPA*FQAKAK
Trigger: CTTTGCTTTGGCTTGGAATCATGCAGGAATGACCAC...GGAGAGGGTCAGGTCAGAAGAAGGCAAGTCCTTGTGGCAAAGACCTGGGCAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp CCCACTTTCTCCCCCTCCCTGGGAAAGGTAGAAAAGCTATACTGTGCTGATGCCGTGGTCATTCCTGCATaGTTCCAAGCCAAAGCAAAG +
Preference number: 2 (lower is better)
Translates to: PTFSPSLGKVEKLYCADAVVIPA*FQAKAK
Trigger: CTTTGCTTTGGCTTGGAATCATGCAGGAATGACCAC...GGCATCAGCACAGTATAGCTTTTCTACCTTTCCCAGGGAGGGGGAGAAAGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp AGTTTTCTGAGAGTGGAACATAGCTGTAAACACAATGAGACATGCATGACCCCAGACTGGGGTGGGTGGTaGCAGGTGGGAAGACTCCAG +
Preference number: 2 (lower is better)
Translates to: SFLRVEHSCKHNETCMTPDWGGW*QVGRLQ
Trigger: CTGGAGTCTTCCCACCTGTCACCACCCACCCCAGTC...TGGGGTCATGCATGTCTCATTGTGTTTACAGCTATGTTCCACTCTCAGAAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp GGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCATCAAGCACAGAGCATATaGTGGGGTTGGCATGTCCTG +
Preference number: 2 (lower is better)
Translates to: GMSCRGTVRKLPLFLHSHQAQSI*WGWHVL
Trigger: CAGGACATGCCAACCCCATCATATGCTCTGTGCTTG...ATGGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp CCCACTTTCTCCCCCTCCCTGGGAAAGGTAGAAAAGCTATACTGTGCTGATGCCTATTGCCCAGGTCTTTaGCACAAGGACTTGCCTTCT +
Preference number: 2 (lower is better)
Translates to: PTFSPSLGKVEKLYCADAYCPGL*HKDLPS
Trigger: AGAAGGCAAGTCCTTGTGGCAAAGACCTGGGCAATA...GGCATCAGCACAGTATAGCTTTTCTACCTTTCCCAGGGAGGGGGAGAAAGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp GGTGCACAAATATCTTGGGGGACTATGTGTGGGGAGGCAAGTTGTGATGGAGATTGGAGTCCAGCAAGCTaGCACAGTATACCTCTCAGC +
Preference number: 2 (lower is better)
Translates to: GAQISWGTMCGEASCDGDWSPAS*HSIPLS
Trigger: GCTGAGAGGTATACTGTGGCAGCTTGCTGGACTCCA...ATCTCCATCACAACTTGCCTCCCCACACATAGTCCCCCAAGATATTTGTGCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp TATACACAGTATCTCACACAGGATGCTGATTCCCCAAAGCAGCATTGGGCCTGCTGGAGTCCAGCAAGCTaGCACAGTATACCTCTCAGC +
Preference number: 2 (lower is better)
Translates to: YTQYLTQDADSPKQHWACWSPAS*HSIPLS
Trigger: GCTGAGAGGTATACTGTGGCAGCTTGCTGGACTCCA...GCAGGCCCAATGCTGCTTTGGGGAATCAGCATCCTGTGTGAGATACTGTGTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp TTGGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCTGGAGTCCAGCAAGCTaGCACAGTATACCTCTCAGC +
Preference number: 2 (lower is better)
Translates to: LACPAGAQLGNFLYFSIAWSPAS*HSIPLS
Trigger: GCTGAGAGGTATACTGTGGCAGCTTGCTGGACTCCA...GGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp TCCAAGGGCAGATGCATGTCTAAAATCGACCTCATTTCTGGTTGTAAGGCTGTCATGCTGCGGGTGCACTaGAGGAAGGGCTTCTCATCC +
Preference number: 2 (lower is better)
Translates to: SKGRCMSKIDLISGCKAVMLRVH*RKGFSS
Trigger: GGATGAGAAGCCCTTCCTGCAGTGCACCCGCAGCAT...GACAGCCTTACAACCAGAAATGAGGTCGATTTTAGACATGCATCTGCCCTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
3UTR-3UTR GCA 90 bp GAACCTAGCATAAGACAATGCAGGAAAACTGGTGGAGGTGCCTTTGGATCTGAATCCCTGTCTCAATGCTaGGGGTGCACTGCAGGAAGG +
Preference number: 2 (lower is better)
Translates to: EPSIRQCRKTGGGAFGSESLSQC*GCTAGR
Trigger: CCTTCCTGCAGTGCACCCGCAGCATTGAGACAGGGA...TTCAGATCCAAAGGCACCTCCACCAGTTTTCCTGCATTGTCTTATGCTAGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
3UTR-3UTR GCA 90 bp TCCAAGGGCAGATGCATGTCTAAAATCGACCTCATTTCTGGTTGTAAGGCTGTCTGGGAGAATCTAGGATaGAGGGGCTTCGCCCAGCCT +
Preference number: 2 (lower is better)
Translates to: SKGRCMSKIDLISGCKAVWENLG*RGFAQP
Trigger: AGGCTGGGCGAAGCCCCTGCATCCTAGATTCTCCCA...GACAGCCTTACAACCAGAAATGAGGTCGATTTTAGACATGCATCTGCCCTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
3UTR-3UTR CCA 90 bp ACCAGTAGCCACATAACATCTAGCAGGTACAATTTTGTGCCAGCTTGGCTTTTGAGGTTCTGGGAGTCCTaGCTCCCAAACCTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: TSSHITSSRYNFVPAWLLRFWES*LPNLGQ
Trigger: CTGCCCCAGGTTTGGGAGCCAGGACTCCCAGAACCT...CAAAAGCCAAGCTGGCACAAAATTGTACCTGCTAGATGTTATGTGGCTACTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp AAGTCTCATGAACCTAGCATAAGACAATGCAGGAAAACTGGTGGAGGTGCCTTTAGGTTCTGGGAGTCCTaGCTCCCAAACCTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: KSHEPSIRQCRKTGGGAFRFWES*LPNLGQ
Trigger: CTGCCCCAGGTTTGGGAGCCAGGACTCCCAGAACCT...AAAGGCACCTCCACCAGTTTTCCTGCATTGTCTTATGCTAGGTTCATGAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp ACCAGGTTGATCCTTCCAGCTTTAGGCTGTGCCTGGTACCCTGAAGCTAGGCAATCATCCTGGAGTCACTaGGGAATAAATAGCATGGGG +
Preference number: 2 (lower is better)
Translates to: TRLILPALGCAWYPEARQSSWSH*GINSMG
Trigger: CCCCATGCTATTTATTCCCCAGTGACTCCAGGATGA...TTGCCTAGCTTCAGGGTACCAGGCACAGCCTAAAGCTGGAAGGATCAACCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp ACAGAAGACCTTGCCCCACATAGCAGCTCGTTGTGTGATGGTTGCTGCTTTTATCAAAGTTCCCAGCTCTaGAGTCCAGCAAGCTGCCAC +
Preference number: 2 (lower is better)
Translates to: TEDLAPHSSSLCDGCCFYQSSQL*SPASCH
Trigger: GTGGCAGCTTGCTGGACTCCAGAGCTGGGAACTTTG...ATAAAAGCAGCAACCATCACACAACGAGCTGCTATGTGGGGCAAGGTCTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp AGCTTGGCTTTTGAAGCTCAAGCAGCTGGTAGAGGCTCCTGCGGTGCAATTTTTGCTTTAGGCTGTGCCTaGTACCCTGAAGCTAGGCAA +
Preference number: 2 (lower is better)
Translates to: SLAFEAQAAGRGSCGAIFALGCA*YPEARQ
Trigger: TTGCCTAGCTTCAGGGTACCAGGCACAGCCTAAAGC...AAAAATTGCACCGCAGGAGCCTCTACCAGCTGCTTGAGCTTCAAAAGCCAAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp GCACAAATATCTTGGGGGACTATGTGTGGGGAGGCAAGTTGTGATGGAGATTGTGCAAGAGGAACCGGCTaGACCAGGTTGATCCTTCCA +
Preference number: 2 (lower is better)
Translates to: AQISWGTMCGEASCDGDCARGTG*TRLILP
Trigger: TGGAAGGATCAACCTGGTCCAGCCGGTTCCTCTTGC...ACAATCTCCATCACAACTTGCCTCCCCACACATAGTCCCCCAAGATATTTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp AGCTTGGCTTTTGAAGCTCAAGCAGCTGGTAGAGGCTCCTGCGGTGCAATTTTTAGATTAGGCTCAGGATaGGTCCAGGGGCAACTAAGG +
Preference number: 2 (lower is better)
Translates to: SLAFEAQAAGRGSCGAIFRLGSG*VQGQLR
Trigger: CCTTAGTTGCCCCTGGACCCATCCTGAGCCTAATCT...AAAAATTGCACCGCAGGAGCCTCTACCAGCTGCTTGAGCTTCAAAAGCCAAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CAA 90 bp TCATCCTGGAGTCACTGGGGAATAAATAGCATGGGGCATTTCTCTTaGTGGCTGCAACGCCAGTATACCTCATTCCACACACAGCAGCAC +
Preference number: 2 (lower is better)
Translates to: SSWSHWGINSMGHFS*WLQRQYTSFHTQQH
Trigger: GTGCTGCTGTGTGTGGAATGAGGTATACTGGCGTTGCAGCCACAAAGAGAAATGCCCCATGCTATTTATTCCCCAGTGACTCCAGGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CAA 90 bp AAAAAGAAATACATTTCAGGAGCAAGAGGAACCGGCTGGACCAGGTaGATCCTTCCAGCTTTAGGCTGTGCCTGGTACCCTGAAGCTAGG +
Preference number: 2 (lower is better)
Translates to: KKKYISGARGTGWTR*ILPALGCAWYPEAR
Trigger: CCTAGCTTCAGGGTACCAGGCACAGCCTAAAGCTGGAAGGATCAACCTGGTCCAGCCGGTTCCTCTTGCTCCTGAAATGTATTTCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp CCTGTGGCAGCCAAGAGACTAGGCAGTACCATAGCATTGCTAGGTTTCTCCCTAGTGGTCATTCCTGCATaGTTCCAAGCCAAAGCAAAG +
Preference number: 2 (lower is better)
Translates to: PVAAKRLGSTIALLGFSLVVIPA*FQAKAK
Trigger: CTTTGCTTTGGCTTGGAATCATGCAGGAATGACCAC...TAGGGAGAAACCTAGCAATGCTATGGTACTGCCTAGTCTCTTGGCTGCCACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp ACCAGGTTGATCCTTCCAGCTTTAGGCTGTGCCTGGTACCCTGAAGCTAGGCAACTCCAGGTAGTTTTCTaGGAGTGGAACATAGCTGTA +
Preference number: 2 (lower is better)
Translates to: TRLILPALGCAWYPEARQLQVVF*EWNIAV
Trigger: TACAGCTATGTTCCACTCTCAGAAAACTACCTGGAG...TTGCCTAGCTTCAGGGTACCAGGCACAGCCTAAAGCTGGAAGGATCAACCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp GGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCATTCTTGCTACCACTGCTaGTTGTTCAAGGCCTCCAAG +
Preference number: 2 (lower is better)
Translates to: GMSCRGTVRKLPLFLHSHSCYHC*LFKASK
Trigger: CTTGGAGGCCTTGAACAATCAGCAGTGGTAGCAAGA...ATGGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp GGTGCACAAATATCTTGGGGGACTATGTGTGGGGAGGCAAGTTGTGATGGAGATATGGGTGAAAGGTCATaGAGGCTCCAAGTTCTGTGG +
Preference number: 2 (lower is better)
Translates to: GAQISWGTMCGEASCDGDMGERS*RLQVLW
Trigger: CCACAGAACTTGGAGCCTTCATGACCTTTCACCCAT...ATCTCCATCACAACTTGCCTCCCCACACATAGTCCCCCAAGATATTTGTGCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp GGAAGATGTTCTGGCAACATTAAGGCCTTTGTAATATGGCAGGAGGAGAGGAGGCAAGCACAGAGCATATaGTGGGGTTGGCATGTCCTG +
Preference number: 2 (lower is better)
Translates to: GRCSGNIKAFVIWQEERRQAQSI*WGWHVL
Trigger: CAGGACATGCCAACCCCATCATATGCTCTGTGCTTG...CCTCCTCTCCTCCTGCCATATTACAAAGGCCTTAATGTTGCCAGAACATCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp TTGGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCATCTGGGGCTCCTTGTaGGGATTCAGGATGAAGACA +
Preference number: 2 (lower is better)
Translates to: LACPAGAQLGNFLYFSIAIWGSL*GFRMKT
Trigger: TGTCTTCATCCTGAATCCTCACAAGGAGCCCCAGAT...GGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp TATACACAGTATCTCACACAGGATGCTGATTCCCCAAAGCAGCATTGGGCCTGCATCTGGGGCTCCTTGTaGGGATTCAGGATGAAGACA +
Preference number: 2 (lower is better)
Translates to: YTQYLTQDADSPKQHWACIWGSL*GFRMKT
Trigger: TGTCTTCATCCTGAATCCTCACAAGGAGCCCCAGAT...GCAGGCCCAATGCTGCTTTGGGGAATCAGCATCCTGTGTGAGATACTGTGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp TATACACAGTATCTCACACAGGATGCTGATTCCCCAAAGCAGCATTGGGCCTGCAGCCTAAGAAGGTTCTaGTTCTTGACAACCCTGGGG +
Preference number: 2 (lower is better)
Translates to: YTQYLTQDADSPKQHWACSLRRF*FLTTLG
Trigger: CCCCAGGGTTGTCAAGAAGCAGAACCTTCTTAGGCT...GCAGGCCCAATGCTGCTTTGGGGAATCAGCATCCTGTGTGAGATACTGTGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp CAAATCAGGTTCTGTAGTAGGCATGGCCCAGGGAAAGCCCAGGCAAGGGTGGGAAGAAGACGCATAAAATaGAATCACTCACATGAGGAC +
Preference number: 2 (lower is better)
Translates to: QIRFCSRHGPGKAQARVGRRRIK*NHSHED
Trigger: GTCCTCATGTGAGTGATTGCATTTTATGCGTCTTCT...TCCCACCCTTGCCTGGGCTTTCCCTGGGCCATGCCTACTACAGAACCTGATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp CCTGTGGCAGCCAAGAGACTAGGCAGTACCATAGCATTGCTAGGTTTCTCCCTAATAGAGATGTCAGCGTaGACCATCTTCACGGCGATT +
Preference number: 2 (lower is better)
Translates to: PVAAKRLGSTIALLGFSLIEMSA*TIFTAI
Trigger: AATCGCCGTGAAGATGGTGCACGCTGACATCTCTAT...TAGGGAGAAACCTAGCAATGCTATGGTACTGCCTAGTCTCTTGGCTGCCACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
3UTR-3UTR CCA 90 bp GGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCATGGGCATTTCTCTTTGTaGCTGCAACGCCAGTATACC +
Preference number: 2 (lower is better)
Translates to: GMSCRGTVRKLPLFLHSHGHFSL*LQRQYT
Trigger: GGTATACTGGCGTTGCAGCCACAAAGAGAAATGCCC...ATGGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp GTCAGCAGGGAGCCTAAGAAGGTTCTGCTTCTTGACAACCCTGGGGCTCCGTCAATCACCCCTAGAATCTaGAGTGCACCTTTTCTTTTT +
Preference number: 2 (lower is better)
Translates to: VSREPKKVLLLDNPGAPSITPRI*SAPFLF
Trigger: AAAAAGAAAAGGTGCACTCCAGATTCTAGGGGTGAT...TGACGGAGCCCCAGGGTTGTCAAGAAGCAGAACCTTCTTAGGCTCCCTGCTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp GGAAGATGTTCTGGCAACATTAAGGCCTTTGTAATATGGCAGGAGGAGAGGAGGGCTTTAGGCTGTGCCTaGTACCCTGAAGCTAGGCAA +
Preference number: 2 (lower is better)
Translates to: GRCSGNIKAFVIWQEERRALGCA*YPEARQ
Trigger: TTGCCTAGCTTCAGGGTACCAGGCACAGCCTAAAGC...CCTCCTCTCCTCCTGCCATATTACAAAGGCCTTAATGTTGCCAGAACATCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp TCCAAGGGCAGATGCATGTCTAAAATCGACCTCATTTCTGGTTGTAAGGCTGTCGGACTTGCCTTCTTCTaGCCTGACCCTCTCCTTAAG +
Preference number: 2 (lower is better)
Translates to: SKGRCMSKIDLISGCKAVGLAFF*PDPLLK
Trigger: CTTAAGGAGAGGGTCAGGTCAGAAGAAGGCAAGTCC...GACAGCCTTACAACCAGAAATGAGGTCGATTTTAGACATGCATCTGCCCTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp TGTGTGATGGTTGCTGCTTTTATCAGATGGGTGAAAGGTCATGAAGGCTCCAAGGGACTTGCCTTCTTCTaGCCTGACCCTCTCCTTAAG +
Preference number: 2 (lower is better)
Translates to: CVMVAAFIRWVKGHEGSKGLAFF*PDPLLK
Trigger: CTTAAGGAGAGGGTCAGGTCAGAAGAAGGCAAGTCC...CTTGGAGCCTTCATGACCTTTCACCCATCTGATAAAAGCAGCAACCATCACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp ATAAGACAATGCAGGAAAACTGGTGGAGGTGCCTTTGGATCTGAAGTAGGTGTGGGACTTGCCTTCTTCTaGCCTGACCCTCTCCTTAAG +
Preference number: 2 (lower is better)
Translates to: IRQCRKTGGGAFGSEVGVGLAFF*PDPLLK
Trigger: CTTAAGGAGAGGGTCAGGTCAGAAGAAGGCAAGTCC...CACACCTACTTCAGATCCAAAGGCACCTCCACCAGTTTTCCTGCATTGTCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp GGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCATGTGGTCATTCCTGCATaGTTCCAAGCCAAAGCAAAG +
Preference number: 2 (lower is better)
Translates to: GMSCRGTVRKLPLFLHSHVVIPA*FQAKAK
Trigger: CTTTGCTTTGGCTTGGAATCATGCAGGAATGACCAC...ATGGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp GGTGCACAAATATCTTGGGGGACTATGTGTGGGGAGGCAAGTTGTGATGGAGATCCTAGGACTCTGCCATaGTATCAGTTCCATGTGATC +
Preference number: 2 (lower is better)
Translates to: GAQISWGTMCGEASCDGDPRTLP*YQFHVI
Trigger: GATCACATGGAACTGATATCATGGCAGAGTCCTAGG...ATCTCCATCACAACTTGCCTCCCCACACATAGTCCCCCAAGATATTTGTGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp GGTGCACAAATATCTTGGGGGACTATGTGTGGGGAGGCAAGTTGTGATGGAGATTATTGCCCAGGTCTTTaGCACAAGGACTTGCCTTCT +
Preference number: 2 (lower is better)
Translates to: GAQISWGTMCGEASCDGDYCPGL*HKDLPS
Trigger: AGAAGGCAAGTCCTTGTGGCAAAGACCTGGGCAATA...ATCTCCATCACAACTTGCCTCCCCACACATAGTCCCCCAAGATATTTGTGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp ACCAGGTTGATCCTTCCAGCTTTAGGCTGTGCCTGGTACCCTGAAGCTAGGCAAGCAATGCAGCAAGAATaGCTCTTCTGTCAAGGATAT +
Preference number: 2 (lower is better)
Translates to: TRLILPALGCAWYPEARQAMQQE*LFCQGY
Trigger: ATATCCTTGACAGAAGAGGCATTCTTGCTGCATTGC...TTGCCTAGCTTCAGGGTACCAGGCACAGCCTAAAGCTGGAAGGATCAACCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp AGCTTGGCTTTTGAAGCTCAAGCAGCTGGTAGAGGCTCCTGCGGTGCAATTTTTGCATGTGGTCATTCCTaGATGATTCCAAGCCAAAGC +
Preference number: 2 (lower is better)
Translates to: SLAFEAQAAGRGSCGAIFACGHS*MIPSQS
Trigger: GCTTTGGCTTGGAATCATGCAGGAATGACCACATGC...AAAAATTGCACCGCAGGAGCCTCTACCAGCTGCTTGAGCTTCAAAAGCCAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp GGAAGATGTTCTGGCAACATTAAGGCCTTTGTAATATGGCAGGAGGAGAGGAGGGGGCATTTCTCTTTGTaGCTGCAACGCCAGTATACC +
Preference number: 2 (lower is better)
Translates to: GRCSGNIKAFVIWQEERRGHFSL*LQRQYT
Trigger: GGTATACTGGCGTTGCAGCCACAAAGAGAAATGCCC...CCTCCTCTCCTCCTGCCATATTACAAAGGCCTTAATGTTGCCAGAACATCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp GTAGAAAAGCTATACTGTGCTGATGCCCAAGGGAGTGTAGGGTTTGGGAATTCCGGGCATTTCTCTTTGTaGCTGCAACGCCAGTATACC +
Preference number: 2 (lower is better)
Translates to: VEKLYCADAQGSVGFGNSGHFSL*LQRQYT
Trigger: GGTATACTGGCGTTGCAGCCACAAAGAGAAATGCCC...GGAATTCCCAAACCCTACACTCCCTTGGGCATCAGCACAGTATAGCTTTTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp GGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCATTCATCCTGGAGTCACTaGGGAATAAATAGCATGGGG +
Preference number: 2 (lower is better)
Translates to: GMSCRGTVRKLPLFLHSHSSWSH*GINSMG
Trigger: CCCCATGCTATTTATTCCCCAGTGACTCCAGGATGA...ATGGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp ACCTTGCCCCACATAGCAGCTCGTTGTGTGATGGTTGCTGCTTTTATCAGATGGAAGGACCAAGCAATGTaGCTACTGGGAAATGGAGGT +
Preference number: 2 (lower is better)
Translates to: TLPHIAARCVMVAAFIRWKDQAM*LLGNGG
Trigger: ACCTCCATTTCCCAGTAGCCACATTGCTTGGTCCTT...CCATCTGATAAAAGCAGCAACCATCACACAACGAGCTGCTATGTGGGGCAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp CCAGAACTAGTAGCTAGGGTCAGGAATGGAAGACAGAAGACCTTGCCCCACATAAAGGACCAAGCAATGTaGCTACTGGGAAATGGAGGT +
Preference number: 2 (lower is better)
Translates to: PELVARVRNGRQKTLPHIKDQAM*LLGNGG
Trigger: ACCTCCATTTCCCAGTAGCCACATTGCTTGGTCCTT...TATGTGGGGCAAGGTCTTCTGTCTTCCATTCCTGACCCTAGCTACTAGTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp CATATGATGGGGTTGGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATAAGGCCTTTGTAATATaGCAGGAGGAGAGGAGGAGT +
Preference number: 2 (lower is better)
Translates to: HMMGLACPAGAQLGNFLYKAFVI*QEERRS
Trigger: ACTCCTCCTCTCCTCCTGCCATATTACAAAGGCCTT...ATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCCAACCCCATCATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CAA 90 bp AGCCACATAACATCTAGCAGGTACAATTTTGTGCCAGCTTGGCTTTaGAAGCTCAAGCAGCTGGTAGAGGCTCCTGCGGTGCAATTTTTC +
Preference number: 2 (lower is better)
Translates to: SHITSSRYNFVPAWL*KLKQLVEAPAVQFF
Trigger: GAAAAATTGCACCGCAGGAGCCTCTACCAGCTGCTTGAGCTTCAAAAGCCAAGCTGGCACAAAATTGTACCTGCTAGATGTTATGTGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp GATATTCTTGATGCATTTCAGGGATGCATTTCCCATCTCCTCAAAAAGAAATACGACTGGGGTGGGTGGTaGCAGGTGGGAAGACTCCAG +
Preference number: 2 (lower is better)
Translates to: DILDAFQGCISHLLKKKYDWGGW*QVGRLQ
Trigger: CTGGAGTCTTCCCACCTGTCACCACCCACCCCAGTC...GTATTTCTTTTTGAGGAGATGGGAAATGCATCCCTGAAATGCATCAAGAATATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp ATTCTCGGGAGGGCAACCTCTCAACATCAACAGAGGAAGATGTTCTGGCAACATCCTAGGACTCTGCCATaGTATCAGTTCCATGTGATC +
Preference number: 2 (lower is better)
Translates to: ILGRATSQHQQRKMFWQHPRTLP*YQFHVI
Trigger: GATCACATGGAACTGATATCATGGCAGAGTCCTAGG...ATGTTGCCAGAACATCTTCCTCTGTTGATGTTGAGAGGTTGCCCTCCCGAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp GGCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCATGTGGCTTTGGAATGGATGGGTGAAAGGTCATaGAGGCTCCAAGTTCTGTGG +
Preference number: 2 (lower is better)
Translates to: GTVRKLPLFLHSHVALEWMGERS*RLQVLW
Trigger: CCACAGAACTTGGAGCCTTCATGACCTTTCACCCAT...CCATTCCAAAGCCACATGGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp GTAACAGGATGGGATGTAGGTTGGGCTGCATTCCCTCTAAAAGCCTTTCTAGGTTGTGAGGATTCAGGATaGAGACAGGGTAGTGAGAAG +
Preference number: 2 (lower is better)
Translates to: VTGWDVGWAAFPLKAFLGCEDSG*RQGSEK
Trigger: CTTCTCACTACCCTGTCTTCATCCTGAATCCTCACA...ACCTAGAAAGGCTTTTAGAGGGAATGCAGCCCAACCTACATCCCATCCTGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp ATGATTCCAAGCCAAAGCAAAGTTCCCAGCTCTGGAGTCCAGCAAGCTGCCACAGCAATGCAGCAAGAATaGCTCTTCTGTCAAGGATAT +
Preference number: 2 (lower is better)
Translates to: MIPSQSKVPSSGVQQAATAMQQE*LFCQGY
Trigger: ATATCCTTGACAGAAGAGGCATTCTTGCTGCATTGC...TGTGGCAGCTTGCTGGACTCCAGAGCTGGGAACTTTGCTTTGGCTTGGAATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp AAGTCTCATGAACCTAGCATAAGACAATGCAGGAAAACTGGTGGAGGTGCCTTTTGGAGTCCAGCAAGCTaGCACAGTATACCTCTCAGC +
Preference number: 2 (lower is better)
Translates to: KSHEPSIRQCRKTGGGAFWSPAS*HSIPLS
Trigger: GCTGAGAGGTATACTGTGGCAGCTTGCTGGACTCCA...AAAGGCACCTCCACCAGTTTTCCTGCATTGTCTTATGCTAGGTTCATGAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp ACCAGTAGCCACATAACATCTAGCAGGTACAATTTTGTGCCAGCTTGGCTTTTGTGGAGTCCAGCAAGCTaGCACAGTATACCTCTCAGC +
Preference number: 2 (lower is better)
Translates to: TSSHITSSRYNFVPAWLLWSPAS*HSIPLS
Trigger: GCTGAGAGGTATACTGTGGCAGCTTGCTGGACTCCA...CAAAAGCCAAGCTGGCACAAAATTGTACCTGCTAGATGTTATGTGGCTACTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp CATATGATGGGGTTGGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATCCTAGCATAAGACAATaGAGGAAAACTGGTGGAGGT +
Preference number: 2 (lower is better)
Translates to: HMMGLACPAGAQLGNFLYPSIRQ*RKTGGG
Trigger: ACCTCCACCAGTTTTCCTGCATTGTCTTATGCTAGG...ATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCCAACCCCATCATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp GTAACAGGATGGGATGTAGGTTGGGCTGCATTCCCTCTAAAAGCCTTTCTAGGTGGATGTAGGTTGGGCTaGATTCCCTCTAAAAGCCTT +
Preference number: 2 (lower is better)
Translates to: VTGWDVGWAAFPLKAFLGGCRLG*IPSKSL
Trigger: AAGGCTTTTAGAGGGAATGCAGCCCAACCTACATCC...ACCTAGAAAGGCTTTTAGAGGGAATGCAGCCCAACCTACATCCCATCCTGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp ATAAGACAATGCAGGAAAACTGGTGGAGGTGCCTTTGGATCTGAAGTAGGTGTGGAGGAGGCACACGCCTaGAGTATAGCAAGTGTTGTA +
Preference number: 2 (lower is better)
Translates to: IRQCRKTGGGAFGSEVGVEEAHA*SIASVV
Trigger: TACAACACTTGCTATACTGCAGGCGTGTGCCTCCTC...CACACCTACTTCAGATCCAAAGGCACCTCCACCAGTTTTCCTGCATTGTCTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
3UTR-3UTR GCA 90 bp GCACAAATATCTTGGGGGACTATGTGTGGGGAGGCAAGTTGTGATGGAGATTGTATAGAGATGTCAGCGTaGACCATCTTCACGGCGATT +
Preference number: 2 (lower is better)
Translates to: AQISWGTMCGEASCDGDCIEMSA*TIFTAI
Trigger: AATCGCCGTGAAGATGGTGCACGCTGACATCTCTAT...ACAATCTCCATCACAACTTGCCTCCCCACACATAGTCCCCCAAGATATTTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
3UTR-3UTR CCA 90 bp AGGGAGTGTAGGGTTTGGGAATTCCAAAATTTACTGTGGCAGGTAACTGCTGAGGGGCATTTCTCTTTGTaGCTGCAACGCCAGTATACC +
Preference number: 2 (lower is better)
Translates to: RECRVWEFQNLLWQVTAEGHFSL*LQRQYT
Trigger: GGTATACTGGCGTTGCAGCCACAAAGAGAAATGCCC...CTCAGCAGTTACCTGCCACAGTAAATTTTGGAATTCCCAAACCCTACACTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp GTAACAGGATGGGATGTAGGTTGGGCTGCATTCCCTCTAAAAGCCTTTCTAGGTTCATCCTGGAGTCACTaGGGAATAAATAGCATGGGG +
Preference number: 2 (lower is better)
Translates to: VTGWDVGWAAFPLKAFLGSSWSH*GINSMG
Trigger: CCCCATGCTATTTATTCCCCAGTGACTCCAGGATGA...ACCTAGAAAGGCTTTTAGAGGGAATGCAGCCCAACCTACATCCCATCCTGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp ATTCTCGGGAGGGCAACCTCTCAACATCAACAGAGGAAGATGTTCTGGCAACATTCATCCTGGAGTCACTaGGGAATAAATAGCATGGGG +
Preference number: 2 (lower is better)
Translates to: ILGRATSQHQQRKMFWQHSSWSH*GINSMG
Trigger: CCCCATGCTATTTATTCCCCAGTGACTCCAGGATGA...ATGTTGCCAGAACATCTTCCTCTGTTGATGTTGAGAGGTTGCCCTCCCGAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp CCTGTGGCAGCCAAGAGACTAGGCAGTACCATAGCATTGCTAGGTTTCTCCCTATGTGGCCTACTGTCTTaGATCCTCATTTTAGTGCAA +
Preference number: 2 (lower is better)
Translates to: PVAAKRLGSTIALLGFSLCGLLS*ILILVQ
Trigger: TTGCACTAAAATGAGGATCCAAGACAGTAGGCCACA...TAGGGAGAAACCTAGCAATGCTATGGTACTGCCTAGTCTCTTGGCTGCCACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp CACAGAGCATATGATGGGGTTGGCATGTCCTGCAGGGGCACAGTTAGGAAACTTTGTGGCCTACTGTCTTaGATCCTCATTTTAGTGCAA +
Preference number: 2 (lower is better)
Translates to: HRAYDGVGMSCRGTVRKLCGLLS*ILILVQ
Trigger: TTGCACTAAAATGAGGATCCAAGACAGTAGGCCACA...AAGTTTCCTAACTGTGCCCCTGCAGGACATGCCAACCCCATCATATGCTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp ATGATTCCAAGCCAAAGCAAAGTTCCCAGCTCTGGAGTCCAGCAAGCTGCCACACACCTTTTCTTTTTGTaGCCTACTGTCTTGGATCCT +
Preference number: 2 (lower is better)
Translates to: MIPSQSKVPSSGVQQAATHLFFL*PTVLDP
Trigger: AGGATCCAAGACAGTAGGCCACAAAAAGAAAAGGTG...TGTGGCAGCTTGCTGGACTCCAGAGCTGGGAACTTTGCTTTGGCTTGGAATCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp TATTGCCCAGGTCTTTGCCACAAGGACTTGCCTTCTTCTGACCTGACCCTCTCCATCACCCCTAGAATCTaGAGTGCACCTTTTCTTTTT +
Preference number: 2 (lower is better)
Translates to: YCPGLCHKDLPSSDLTLSITPRI*SAPFLF
Trigger: AAAAAGAAAAGGTGCACTCCAGATTCTAGGGGTGAT...GGAGAGGGTCAGGTCAGAAGAAGGCAAGTCCTTGTGGCAAAGACCTGGGCAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp AGTTTTCTGAGAGTGGAACATAGCTGTAAACACAATGAGACATGCATGACCCCACAAAGTTCCCAGCTCTaGAGTCCAGCAAGCTGCCAC +
Preference number: 2 (lower is better)
Translates to: SFLRVEHSCKHNETCMTPQSSQL*SPASCH
Trigger: GTGGCAGCTTGCTGGACTCCAGAGCTGGGAACTTTG...TGGGGTCATGCATGTCTCATTGTGTTTACAGCTATGTTCCACTCTCAGAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp CCTGTGGCAGCCAAGAGACTAGGCAGTACCATAGCATTGCTAGGTTTCTCCCTATTCCAAAATTTACTGTaGCAGGTAACTGCTGAGTGC +
Preference number: 2 (lower is better)
Translates to: PVAAKRLGSTIALLGFSLFQNLL*QVTAEC
Trigger: GCACTCAGCAGTTACCTGCCACAGTAAATTTTGGAA...TAGGGAGAAACCTAGCAATGCTATGGTACTGCCTAGTCTCTTGGCTGCCACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp ACAGAAGACCTTGCCCCACATAGCAGCTCGTTGTGTGATGGTTGCTGCTTTTATAAGCAATGTGGCTACTaGGAAATGGAGGTACAGCTG +
Preference number: 2 (lower is better)
Translates to: TEDLAPHSSSLCDGCCFYKQCGY*EMEVQL
Trigger: CAGCTGTACCTCCATTTCCCAGTAGCCACATTGCTT...ATAAAAGCAGCAACCATCACACAACGAGCTGCTATGTGGGGCAAGGTCTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp GCACAAATATCTTGGGGGACTATGTGTGGGGAGGCAAGTTGTGATGGAGATTGTAAGCAATGTGGCTACTaGGAAATGGAGGTACAGCTG +
Preference number: 2 (lower is better)
Translates to: AQISWGTMCGEASCDGDCKQCGY*EMEVQL
Trigger: CAGCTGTACCTCCATTTCCCAGTAGCCACATTGCTT...ACAATCTCCATCACAACTTGCCTCCCCACACATAGTCCCCCAAGATATTTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp GGAAGATGTTCTGGCAACATTAAGGCCTTTGTAATATGGCAGGAGGAGAGGAGGAAGGACCAAGCAATGTaGCTACTGGGAAATGGAGGT +
Preference number: 2 (lower is better)
Translates to: GRCSGNIKAFVIWQEERRKDQAM*LLGNGG
Trigger: ACCTCCATTTCCCAGTAGCCACATTGCTTGGTCCTT...CCTCCTCTCCTCCTGCCATATTACAAAGGCCTTAATGTTGCCAGAACATCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp ACCTTGCCCCACATAGCAGCTCGTTGTGTGATGGTTGCTGCTTTTATCAGATGGTGTATAAAAGAGTCCTaGCCTACCACCTCTTGTCCT +
Preference number: 2 (lower is better)
Translates to: TLPHIAARCVMVAAFIRWCIKES*PTTSCP
Trigger: AGGACAAGAGGTGGTAGGCCAGGACTCTTTTATACA...CCATCTGATAAAAGCAGCAACCATCACACAACGAGCTGCTATGTGGGGCAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp AGCTTGGCTTTTGAAGCTCAAGCAGCTGGTAGAGGCTCCTGCGGTGCAATTTTTGCTGCTTTTATCAGATaGGTGAAAGGTCATGAAGGC +
Preference number: 2 (lower is better)
Translates to: SLAFEAQAAGRGSCGAIFAAFIR*VKGHEG
Trigger: GCCTTCATGACCTTTCACCCATCTGATAAAAGCAGC...AAAAATTGCACCGCAGGAGCCTCTACCAGCTGCTTGAGCTTCAAAAGCCAAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp CACAGAGCATATGATGGGGTTGGCATGTCCTGCAGGGGCACAGTTAGGAAACTTATAGCCATGTGGCTTTaGAATGGTGCTCTTAGGTTT +
Preference number: 2 (lower is better)
Translates to: HRAYDGVGMSCRGTVRKLIAMWL*NGALRF
Trigger: AAACCTAAGAGCACCATTCCAAAGCCACATGGCTAT...AAGTTTCCTAACTGTGCCCCTGCAGGACATGCCAACCCCATCATATGCTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp TATACACAGTATCTCACACAGGATGCTGATTCCCCAAAGCAGCATTGGGCCTGCCTAGCTTTGATTCTGTaGGTGTATGAAAGAGGAGGC +
Preference number: 2 (lower is better)
Translates to: YTQYLTQDADSPKQHWACLALIL*VYERGG
Trigger: GCCTCCTCTTTCATACACCCACAGAATCAAAGCTAG...GCAGGCCCAATGCTGCTTTGGGGAATCAGCATCCTGTGTGAGATACTGTGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CAA 90 bp GATATTGACTTGGTAGGTTATTGCCCAGGTCTTTGCCACAAGGACTaGCCTTCTTCTGACCTGACCCTCTCCTTAAGTTGCAACCTAATG +
Preference number: 2 (lower is better)
Translates to: DIDLVGYCPGLCHKD*PSSDLTLSLSCNLM
Trigger: CATTAGGTTGCAACTTAAGGAGAGGGTCAGGTCAGAAGAAGGCAAGTCCTTGTGGCAAAGACCTGGGCAATAACCTACCAAGTCAATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp GGAAGATGTTCTGGCAACATTAAGGCCTTTGTAATATGGCAGGAGGAGAGGAGGCTCCAGGTAGTTTTCTaGGAGTGGAACATAGCTGTA +
Preference number: 2 (lower is better)
Translates to: GRCSGNIKAFVIWQEERRLQVVF*EWNIAV
Trigger: TACAGCTATGTTCCACTCTCAGAAAACTACCTGGAG...CCTCCTCTCCTCCTGCCATATTACAAAGGCCTTAATGTTGCCAGAACATCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp GTTCTTGCTACCACTGCTGATTGTTCAAGGCCTCCAAGGGCAGATGCATGTCTATTAAAGAGTACACTGTaGAGCACCTGTCTAAAGCAG +
Preference number: 2 (lower is better)
Translates to: VLATTADCSRPPRADACLLKSTL*STCLKQ
Trigger: CTGCTTTAGACAGGTGCTTCACAGTGTACTCTTTAA...TAGACATGCATCTGCCCTTGGAGGCCTTGAACAATCAGCAGTGGTAGCAAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp CATATGATGGGGTTGGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATGCAATGCAGCAAGAATaGCTCTTCTGTCAAGGATAT +
Preference number: 2 (lower is better)
Translates to: HMMGLACPAGAQLGNFLYAMQQE*LFCQGY
Trigger: ATATCCTTGACAGAAGAGGCATTCTTGCTGCATTGC...ATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCCAACCCCATCATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp ACCTTGCCCCACATAGCAGCTCGTTGTGTGATGGTTGCTGCTTTTATCAGATGGGCAATGCAGCAAGAATaGCTCTTCTGTCAAGGATAT +
Preference number: 2 (lower is better)
Translates to: TLPHIAARCVMVAAFIRWAMQQE*LFCQGY
Trigger: ATATCCTTGACAGAAGAGGCATTCTTGCTGCATTGC...CCATCTGATAAAAGCAGCAACCATCACACAACGAGCTGCTATGTGGGGCAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp AGGGAGTGTAGGGTTTGGGAATTCCAAAATTTACTGTGGCAGGTAACTGCTGAGGCATGTGGTCATTCCTaGATGATTCCAAGCCAAAGC +
Preference number: 2 (lower is better)
Translates to: RECRVWEFQNLLWQVTAEACGHS*MIPSQS
Trigger: GCTTTGGCTTGGAATCATGCAGGAATGACCACATGC...CTCAGCAGTTACCTGCCACAGTAAATTTTGGAATTCCCAAACCCTACACTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp GTAACAGGATGGGATGTAGGTTGGGCTGCATTCCCTCTAAAAGCCTTTCTAGGTCCTAGCATAAGACAATaGAGGAAAACTGGTGGAGGT +
Preference number: 2 (lower is better)
Translates to: VTGWDVGWAAFPLKAFLGPSIRQ*RKTGGG
Trigger: ACCTCCACCAGTTTTCCTGCATTGTCTTATGCTAGG...ACCTAGAAAGGCTTTTAGAGGGAATGCAGCCCAACCTACATCCCATCCTGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp GGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCATGATGCATTTCAGGGATaGATTTCCCATCTCCTCAAA +
Preference number: 2 (lower is better)
Translates to: GMSCRGTVRKLPLFLHSHDAFQG*ISHLLK
Trigger: TTTGAGGAGATGGGAAATGCATCCCTGAAATGCATC...ATGGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp TATACACAGTATCTCACACAGGATGCTGATTCCCCAAAGCAGCATTGGGCCTGCGATGCATTTCAGGGATaGATTTCCCATCTCCTCAAA +
Preference number: 2 (lower is better)
Translates to: YTQYLTQDADSPKQHWACDAFQG*ISHLLK
Trigger: TTTGAGGAGATGGGAAATGCATCCCTGAAATGCATC...GCAGGCCCAATGCTGCTTTGGGGAATCAGCATCCTGTGTGAGATACTGTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp GTTCTTGCTACCACTGCTGATTGTTCAAGGCCTCCAAGGGCAGATGCATGTCTAGATGCATTTCAGGGATaGATTTCCCATCTCCTCAAA +
Preference number: 2 (lower is better)
Translates to: VLATTADCSRPPRADACLDAFQG*ISHLLK
Trigger: TTTGAGGAGATGGGAAATGCATCCCTGAAATGCATC...TAGACATGCATCTGCCCTTGGAGGCCTTGAACAATCAGCAGTGGTAGCAAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp ACCAGTAGCCACATAACATCTAGCAGGTACAATTTTGTGCCAGCTTGGCTTTTGGAGGAGGCACACGCCTaGAGTATAGCAAGTGTTGTA +
Preference number: 2 (lower is better)
Translates to: TSSHITSSRYNFVPAWLLEEAHA*SIASVV
Trigger: TACAACACTTGCTATACTGCAGGCGTGTGCCTCCTC...CAAAAGCCAAGCTGGCACAAAATTGTACCTGCTAGATGTTATGTGGCTACTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
3UTR-3UTR CCA 90 bp TCCAAGGGCAGATGCATGTCTAAAATCGACCTCATTTCTGGTTGTAAGGCTGTCTCATCCTGGAGTCACTaGGGAATAAATAGCATGGGG +
Preference number: 2 (lower is better)
Translates to: SKGRCMSKIDLISGCKAVSSWSH*GINSMG
Trigger: CCCCATGCTATTTATTCCCCAGTGACTCCAGGATGA...GACAGCCTTACAACCAGAAATGAGGTCGATTTTAGACATGCATCTGCCCTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp GCTACCACTGCTGATTGTTCAAGGCCTCCAAGGGCAGATGCATGTCTAAAATCGTGTGGCCTACTGTCTTaGATCCTCATTTTAGTGCAA +
Preference number: 2 (lower is better)
Translates to: ATTADCSRPPRADACLKSCGLLS*ILILVQ
Trigger: TTGCACTAAAATGAGGATCCAAGACAGTAGGCCACA...CGATTTTAGACATGCATCTGCCCTTGGAGGCCTTGAACAATCAGCAGTGGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp CCAGAACTAGTAGCTAGGGTCAGGAATGGAAGACAGAAGACCTTGCCCCACATACACCTTTTCTTTTTGTaGCCTACTGTCTTGGATCCT +
Preference number: 2 (lower is better)
Translates to: PELVARVRNGRQKTLPHIHLFFL*PTVLDP
Trigger: AGGATCCAAGACAGTAGGCCACAAAAAGAAAAGGTG...TATGTGGGGCAAGGTCTTCTGTCTTCCATTCCTGACCCTAGCTACTAGTTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp CCTGTGGCAGCCAAGAGACTAGGCAGTACCATAGCATTGCTAGGTTTCTCCCTAATCACCCCTAGAATCTaGAGTGCACCTTTTCTTTTT +
Preference number: 2 (lower is better)
Translates to: PVAAKRLGSTIALLGFSLITPRI*SAPFLF
Trigger: AAAAAGAAAAGGTGCACTCCAGATTCTAGGGGTGAT...TAGGGAGAAACCTAGCAATGCTATGGTACTGCCTAGTCTCTTGGCTGCCACAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp CCCATTCTCTATGCTAACCTTGGGATAACTTCACATCATGACAATTCCAAACTGGCAAGAGGAACCGGCTaGACCAGGTTGATCCTTCCA +
Preference number: 2 (lower is better)
Translates to: PILYANLGITSHHDNSKLARGTG*TRLILP
Trigger: TGGAAGGATCAACCTGGTCCAGCCGGTTCCTCTTGC...CAGTTTGGAATTGTCATGATGTGAAGTTATCCCAAGGTTAGCATAGAGAATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp GCACAAATATCTTGGGGGACTATGTGTGGGGAGGCAAGTTGTGATGGAGATTGTTGTATAAAAGAGTCCTaGCCTACCACCTCTTGTCCT +
Preference number: 2 (lower is better)
Translates to: AQISWGTMCGEASCDGDCCIKES*PTTSCP
Trigger: AGGACAAGAGGTGGTAGGCCAGGACTCTTTTATACA...ACAATCTCCATCACAACTTGCCTCCCCACACATAGTCCCCCAAGATATTTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp GCACAAATATCTTGGGGGACTATGTGTGGGGAGGCAAGTTGTGATGGAGATTGTGCTGCTTTTATCAGATaGGTGAAAGGTCATGAAGGC +
Preference number: 2 (lower is better)
Translates to: AQISWGTMCGEASCDGDCAAFIR*VKGHEG
Trigger: GCCTTCATGACCTTTCACCCATCTGATAAAAGCAGC...ACAATCTCCATCACAACTTGCCTCCCCACACATAGTCCCCCAAGATATTTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp ATTCTCGGGAGGGCAACCTCTCAACATCAACAGAGGAAGATGTTCTGGCAACATGCTGCTTTTATCAGATaGGTGAAAGGTCATGAAGGC +
Preference number: 2 (lower is better)
Translates to: ILGRATSQHQQRKMFWQHAAFIR*VKGHEG
Trigger: GCCTTCATGACCTTTCACCCATCTGATAAAAGCAGC...ATGTTGCCAGAACATCTTCCTCTGTTGATGTTGAGAGGTTGCCCTCCCGAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp GTAGAAAAGCTATACTGTGCTGATGCCCAAGGGAGTGTAGGGTTTGGGAATTCCAGCAAGTGTTGTAGTTaGTCTTCCCTGTCTCAATGC +
Preference number: 2 (lower is better)
Translates to: VEKLYCADAQGSVGFGNSSKCCS*SSLSQC
Trigger: GCATTGAGACAGGGAAGACCAACTACAACACTTGCT...GGAATTCCCAAACCCTACACTCCCTTGGGCATCAGCACAGTATAGCTTTTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
3UTR-3UTR CCA 90 bp ACAGAAGACCTTGCCCCACATAGCAGCTCGTTGTGTGATGGTTGCTGCTTTTATAGCAAGTGTTGTAGTTaGTCTTCCCTGTCTCAATGC +
Preference number: 2 (lower is better)
Translates to: TEDLAPHSSSLCDGCCFYSKCCS*SSLSQC
Trigger: GCATTGAGACAGGGAAGACCAACTACAACACTTGCT...ATAAAAGCAGCAACCATCACACAACGAGCTGCTATGTGGGGCAAGGTCTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
3UTR-3UTR TCA 90 bp CTTGGGTCTCAACAAAAGTGGACAACATTTCCTGTTCTATCCCCACTTTCTCCCCTCCAGGTAGTTTTCTaGGAGTGGAACATAGCTGTA +
Preference number: 2 (lower is better)
Translates to: LGSQQKWTTFPVLSPLSPLQVVF*EWNIAV
Trigger: TACAGCTATGTTCCACTCTCAGAAAACTACCTGGAG...GGGAGAAAGTGGGGATAGAACAGGAAATGTTGTCCACTTTTGTTGAGACCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp GCACAAATATCTTGGGGGACTATGTGTGGGGAGGCAAGTTGTGATGGAGATTGTTTAAAGAGTACACTGTaGAGCACCTGTCTAAAGCAG +
Preference number: 2 (lower is better)
Translates to: AQISWGTMCGEASCDGDCLKSTL*STCLKQ
Trigger: CTGCTTTAGACAGGTGCTTCACAGTGTACTCTTTAA...ACAATCTCCATCACAACTTGCCTCCCCACACATAGTCCCCCAAGATATTTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp GTAGAAAAGCTATACTGTGCTGATGCCCAAGGGAGTGTAGGGTTTGGGAATTCCTTAAAGAGTACACTGTaGAGCACCTGTCTAAAGCAG +
Preference number: 2 (lower is better)
Translates to: VEKLYCADAQGSVGFGNSLKSTL*STCLKQ
Trigger: CTGCTTTAGACAGGTGCTTCACAGTGTACTCTTTAA...GGAATTCCCAAACCCTACACTCCCTTGGGCATCAGCACAGTATAGCTTTTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp CCCATTCTCTATGCTAACCTTGGGATAACTTCACATCATGACAATTCCAAACTGCAAGCACAGAGCATATaGTGGGGTTGGCATGTCCTG +
Preference number: 2 (lower is better)
Translates to: PILYANLGITSHHDNSKLQAQSI*WGWHVL
Trigger: CAGGACATGCCAACCCCATCATATGCTCTGTGCTTG...CAGTTTGGAATTGTCATGATGTGAAGTTATCCCAAGGTTAGCATAGAGAATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp GGTGCACAAATATCTTGGGGGACTATGTGTGGGGAGGCAAGTTGTGATGGAGATGACATCAATTGCATATaGGTAACAGGATGGGATGTA +
Preference number: 2 (lower is better)
Translates to: GAQISWGTMCGEASCDGDDINCI*VTGWDV
Trigger: TACATCCCATCCTGTTACTCATATGCAATTGATGTC...ATCTCCATCACAACTTGCCTCCCCACACATAGTCCCCCAAGATATTTGTGCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp TCAGATAAGAGCTTGGGTCTCAACAAAAGTGGACAACATTTCCTGTTCTATCCCAGCCTAAGAAGGTTCTaGTTCTTGACAACCCTGGGG +
Preference number: 2 (lower is better)
Translates to: SDKSLGLNKSGQHFLFYPSLRRF*FLTTLG
Trigger: CCCCAGGGTTGTCAAGAAGCAGAACCTTCTTAGGCT...GGGATAGAACAGGAAATGTTGTCCACTTTTGTTGAGACCCAAGCTCTTATCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp TGCCACCGATCTTCAAACTCTAAGGGGCTTTTGGAGGTTATCCAGTTTAACCATTATTGCCCAGGTCTTTaGCACAAGGACTTGCCTTCT +
Preference number: 2 (lower is better)
Translates to: CHRSSNSKGLLEVIQFNHYCPGL*HKDLPS
Trigger: AGAAGGCAAGTCCTTGTGGCAAAGACCTGGGCAATA...ATGGTTAAACTGGATAACCTCCAAAAGCCCCTTAGAGTTTGAAGATCGGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp TATACACAGTATCTCACACAGGATGCTGATTCCCCAAAGCAGCATTGGGCCTGCAGAAGACGCATAAAATaGAATCACTCACATGAGGAC +
Preference number: 2 (lower is better)
Translates to: YTQYLTQDADSPKQHWACRRRIK*NHSHED
Trigger: GTCCTCATGTGAGTGATTGCATTTTATGCGTCTTCT...GCAGGCCCAATGCTGCTTTGGGGAATCAGCATCCTGTGTGAGATACTGTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp TCAGATAAGAGCTTGGGTCTCAACAAAAGTGGACAACATTTCCTGTTCTATCCCGGGCATTTCTCTTTGTaGCTGCAACGCCAGTATACC +
Preference number: 2 (lower is better)
Translates to: SDKSLGLNKSGQHFLFYPGHFSL*LQRQYT
Trigger: GGTATACTGGCGTTGCAGCCACAAAGAGAAATGCCC...GGGATAGAACAGGAAATGTTGTCCACTTTTGTTGAGACCCAAGCTCTTATCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp GTAGAAAAGCTATACTGTGCTGATGCCCAAGGGAGTGTAGGGTTTGGGAATTCCTGTGGCCTACTGTCTTaGATCCTCATTTTAGTGCAA +
Preference number: 2 (lower is better)
Translates to: VEKLYCADAQGSVGFGNSCGLLS*ILILVQ
Trigger: TTGCACTAAAATGAGGATCCAAGACAGTAGGCCACA...GGAATTCCCAAACCCTACACTCCCTTGGGCATCAGCACAGTATAGCTTTTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp ACAGAAGACCTTGCCCCACATAGCAGCTCGTTGTGTGATGGTTGCTGCTTTTATTGTGGCCTACTGTCTTaGATCCTCATTTTAGTGCAA +
Preference number: 2 (lower is better)
Translates to: TEDLAPHSSSLCDGCCFYCGLLS*ILILVQ
Trigger: TTGCACTAAAATGAGGATCCAAGACAGTAGGCCACA...ATAAAAGCAGCAACCATCACACAACGAGCTGCTATGTGGGGCAAGGTCTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp TTTCAGATAAGAGCTTGGGTCTCAACAAAAGTGGACAACATTTCCTGTTCTATCCAAAGTTCCCAGCTCTaGAGTCCAGCAAGCTGCCAC +
Preference number: 2 (lower is better)
Translates to: FQIRAWVSTKVDNISCSIQSSQL*SPASCH
Trigger: GTGGCAGCTTGCTGGACTCCAGAGCTGGGAACTTTG...GATAGAACAGGAAATGTTGTCCACTTTTGTTGAGACCCAAGCTCTTATCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp GATATTCTTGATGCATTTCAGGGATGCATTTCCCATCTCCTCAAAAAGAAATACCTAGTCAGACTGGGGTaGGTGGTGACAGGTGGGAAG +
Preference number: 2 (lower is better)
Translates to: DILDAFQGCISHLLKKKYLVRLG*VVTGGK
Trigger: CTTCCCACCTGTCACCACCCACCCCAGTCTGACTAG...GTATTTCTTTTTGAGGAGATGGGAAATGCATCCCTGAAATGCATCAAGAATATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp GGAAGATGTTCTGGCAACATTAAGGCCTTTGTAATATGGCAGGAGGAGAGGAGGTTCCAAAATTTACTGTaGCAGGTAACTGCTGAGTGC +
Preference number: 2 (lower is better)
Translates to: GRCSGNIKAFVIWQEERRFQNLL*QVTAEC
Trigger: GCACTCAGCAGTTACCTGCCACAGTAAATTTTGGAA...CCTCCTCTCCTCCTGCCATATTACAAAGGCCTTAATGTTGCCAGAACATCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp ACCTTGCCCCACATAGCAGCTCGTTGTGTGATGGTTGCTGCTTTTATCAGATGGGGGTCTCAACAAAAGTaGACAACATTTCCTGTTCTA +
Preference number: 2 (lower is better)
Translates to: TLPHIAARCVMVAAFIRWGSQQK*TTFPVL
Trigger: TAGAACAGGAAATGTTGTCCACTTTTGTTGAGACCC...CCATCTGATAAAAGCAGCAACCATCACACAACGAGCTGCTATGTGGGGCAAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp GGTGCACAAATATCTTGGGGGACTATGTGTGGGGAGGCAAGTTGTGATGGAGATGGGTCTCAACAAAAGTaGACAACATTTCCTGTTCTA +
Preference number: 2 (lower is better)
Translates to: GAQISWGTMCGEASCDGDGSQQK*TTFPVL
Trigger: TAGAACAGGAAATGTTGTCCACTTTTGTTGAGACCC...ATCTCCATCACAACTTGCCTCCCCACACATAGTCCCCCAAGATATTTGTGCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp CATATGATGGGGTTGGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATTTTCAGATAAGAGCTTaGGTCTCAACAAAAGTGGAC +
Preference number: 2 (lower is better)
Translates to: HMMGLACPAGAQLGNFLYFQIRA*VSTKVD
Trigger: GTCCACTTTTGTTGAGACCCAAGCTCTTATCTGAAA...ATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCCAACCCCATCATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp GGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCATTTTCAGATAAGAGCTTaGGTCTCAACAAAAGTGGAC +
Preference number: 2 (lower is better)
Translates to: GMSCRGTVRKLPLFLHSHFQIRA*VSTKVD
Trigger: GTCCACTTTTGTTGAGACCCAAGCTCTTATCTGAAA...ATGGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp GGAAGATGTTCTGGCAACATTAAGGCCTTTGTAATATGGCAGGAGGAGAGGAGGATAGCCATGTGGCTTTaGAATGGTGCTCTTAGGTTT +
Preference number: 2 (lower is better)
Translates to: GRCSGNIKAFVIWQEERRIAMWL*NGALRF
Trigger: AAACCTAAGAGCACCATTCCAAAGCCACATGGCTAT...CCTCCTCTCCTCCTGCCATATTACAAAGGCCTTAATGTTGCCAGAACATCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp TGCCACCGATCTTCAAACTCTAAGGGGCTTTTGGAGGTTATCCAGTTTAACCATCTCCAGGTAGTTTTCTaGGAGTGGAACATAGCTGTA +
Preference number: 2 (lower is better)
Translates to: CHRSSNSKGLLEVIQFNHLQVVF*EWNIAV
Trigger: TACAGCTATGTTCCACTCTCAGAAAACTACCTGGAG...ATGGTTAAACTGGATAACCTCCAAAAGCCCCTTAGAGTTTGAAGATCGGTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp ACCAGTAGCCACATAACATCTAGCAGGTACAATTTTGTGCCAGCTTGGCTTTTGCTCCAGGTAGTTTTCTaGGAGTGGAACATAGCTGTA +
Preference number: 2 (lower is better)
Translates to: TSSHITSSRYNFVPAWLLLQVVF*EWNIAV
Trigger: TACAGCTATGTTCCACTCTCAGAAAACTACCTGGAG...CAAAAGCCAAGCTGGCACAAAATTGTACCTGCTAGATGTTATGTGGCTACTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp TGTGTGATGGTTGCTGCTTTTATCAGATGGGTGAAAGGTCATGAAGGCTCCAAGTTAAAGAGTACACTGTaGAGCACCTGTCTAAAGCAG +
Preference number: 2 (lower is better)
Translates to: CVMVAAFIRWVKGHEGSKLKSTL*STCLKQ
Trigger: CTGCTTTAGACAGGTGCTTCACAGTGTACTCTTTAA...CTTGGAGCCTTCATGACCTTTCACCCATCTGATAAAAGCAGCAACCATCACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp CCCATTCTCTATGCTAACCTTGGGATAACTTCACATCATGACAATTCCAAACTGAGCCTAAGAAGGTTCTaGTTCTTGACAACCCTGGGG +
Preference number: 2 (lower is better)
Translates to: PILYANLGITSHHDNSKLSLRRF*FLTTLG
Trigger: CCCCAGGGTTGTCAAGAAGCAGAACCTTCTTAGGCT...CAGTTTGGAATTGTCATGATGTGAAGTTATCCCAAGGTTAGCATAGAGAATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp TGTGTGATGGTTGCTGCTTTTATCAGATGGGTGAAAGGTCATGAAGGCTCCAAGGATGCATTTCAGGGATaGATTTCCCATCTCCTCAAA +
Preference number: 2 (lower is better)
Translates to: CVMVAAFIRWVKGHEGSKDAFQG*ISHLLK
Trigger: TTTGAGGAGATGGGAAATGCATCCCTGAAATGCATC...CTTGGAGCCTTCATGACCTTTCACCCATCTGATAAAAGCAGCAACCATCACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp TCAGATAAGAGCTTGGGTCTCAACAAAAGTGGACAACATTTCCTGTTCTATCCCTCATCCTGGAGTCACTaGGGAATAAATAGCATGGGG +
Preference number: 2 (lower is better)
Translates to: SDKSLGLNKSGQHFLFYPSSWSH*GINSMG
Trigger: CCCCATGCTATTTATTCCCCAGTGACTCCAGGATGA...GGGATAGAACAGGAAATGTTGTCCACTTTTGTTGAGACCCAAGCTCTTATCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp ATAAGACAATGCAGGAAAACTGGTGGAGGTGCCTTTGGATCTGAAGTAGGTGTGCACCTTTTCTTTTTGTaGCCTACTGTCTTGGATCCT +
Preference number: 2 (lower is better)
Translates to: IRQCRKTGGGAFGSEVGVHLFFL*PTVLDP
Trigger: AGGATCCAAGACAGTAGGCCACAAAAAGAAAAGGTG...CACACCTACTTCAGATCCAAAGGCACCTCCACCAGTTTTCCTGCATTGTCTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp ATTCTCGGGAGGGCAACCTCTCAACATCAACAGAGGAAGATGTTCTGGCAACATATCACCCCTAGAATCTaGAGTGCACCTTTTCTTTTT +
Preference number: 2 (lower is better)
Translates to: ILGRATSQHQQRKMFWQHITPRI*SAPFLF
Trigger: AAAAAGAAAAGGTGCACTCCAGATTCTAGGGGTGAT...ATGTTGCCAGAACATCTTCCTCTGTTGATGTTGAGAGGTTGCCCTCCCGAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp GGCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCATGTGGCTTTGGAATGGTTCCAAAATTTACTGTaGCAGGTAACTGCTGAGTGC +
Preference number: 2 (lower is better)
Translates to: GTVRKLPLFLHSHVALEWFQNLL*QVTAEC
Trigger: GCACTCAGCAGTTACCTGCCACAGTAAATTTTGGAA...CCATTCCAAAGCCACATGGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp ACCAGTAGCCACATAACATCTAGCAGGTACAATTTTGTGCCAGCTTGGCTTTTGGCTGCTTTTATCAGATaGGTGAAAGGTCATGAAGGC +
Preference number: 2 (lower is better)
Translates to: TSSHITSSRYNFVPAWLLAAFIR*VKGHEG
Trigger: GCCTTCATGACCTTTCACCCATCTGATAAAAGCAGC...CAAAAGCCAAGCTGGCACAAAATTGTACCTGCTAGATGTTATGTGGCTACTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp GGCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCATGTGGCTTTGGAATGGATAGCCATGTGGCTTTaGAATGGTGCTCTTAGGTTT +
Preference number: 2 (lower is better)
Translates to: GTVRKLPLFLHSHVALEWIAMWL*NGALRF
Trigger: AAACCTAAGAGCACCATTCCAAAGCCACATGGCTAT...CCATTCCAAAGCCACATGGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CAA 90 bp CTGTCTGGACATCAATTGCATATGAGTAACAGGATGGGATGTAGGTaGGGCTGCATTCCCTCTAAAAGCCTTTCTAGGTCAAAGATTTCT +
Preference number: 2 (lower is better)
Translates to: LSGHQLHMSNRMGCR*GCIPSKSLSRSKIS
Trigger: AGAAATCTTTGACCTAGAAAGGCTTTTAGAGGGAATGCAGCCCAACCTACATCCCATCCTGTTACTCATATGCAATTGATGTCCAGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR TCA 90 bp TGCCACCGATCTTCAAACTCTAAGGGGCTTTTGGAGGTTATCCAGTTTAACCATTTAAAGAGTACACTGTaGAGCACCTGTCTAAAGCAG +
Preference number: 2 (lower is better)
Translates to: CHRSSNSKGLLEVIQFNHLKSTL*STCLKQ
Trigger: CTGCTTTAGACAGGTGCTTCACAGTGTACTCTTTAA...ATGGTTAAACTGGATAACCTCCAAAAGCCCCTTAGAGTTTGAAGATCGGTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp ACCAGTAGCCACATAACATCTAGCAGGTACAATTTTGTGCCAGCTTGGCTTTTGGCAATGCAGCAAGAATaGCTCTTCTGTCAAGGATAT +
Preference number: 2 (lower is better)
Translates to: TSSHITSSRYNFVPAWLLAMQQE*LFCQGY
Trigger: ATATCCTTGACAGAAGAGGCATTCTTGCTGCATTGC...CAAAAGCCAAGCTGGCACAAAATTGTACCTGCTAGATGTTATGTGGCTACTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp CCCATTCTCTATGCTAACCTTGGGATAACTTCACATCATGACAATTCCAAACTGGCATGTGGTCATTCCTaGATGATTCCAAGCCAAAGC +
Preference number: 2 (lower is better)
Translates to: PILYANLGITSHHDNSKLACGHS*MIPSQS
Trigger: GCTTTGGCTTGGAATCATGCAGGAATGACCACATGC...CAGTTTGGAATTGTCATGATGTGAAGTTATCCCAAGGTTAGCATAGAGAATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp ACCAGTAGCCACATAACATCTAGCAGGTACAATTTTGTGCCAGCTTGGCTTTTGGATGCATTTCAGGGATaGATTTCCCATCTCCTCAAA +
Preference number: 2 (lower is better)
Translates to: TSSHITSSRYNFVPAWLLDAFQG*ISHLLK
Trigger: TTTGAGGAGATGGGAAATGCATCCCTGAAATGCATC...CAAAAGCCAAGCTGGCACAAAATTGTACCTGCTAGATGTTATGTGGCTACTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp TGCCACCGATCTTCAAACTCTAAGGGGCTTTTGGAGGTTATCCAGTTTAACCATTGTGGCCTACTGTCTTaGATCCTCATTTTAGTGCAA +
Preference number: 2 (lower is better)
Translates to: CHRSSNSKGLLEVIQFNHCGLLS*ILILVQ
Trigger: TTGCACTAAAATGAGGATCCAAGACAGTAGGCCACA...ATGGTTAAACTGGATAACCTCCAAAAGCCCCTTAGAGTTTGAAGATCGGTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp CTTGGGTCTCAACAAAAGTGGACAACATTTCCTGTTCTATCCCCACTTTCTCCCATCACCCCTAGAATCTaGAGTGCACCTTTTCTTTTT +
Preference number: 2 (lower is better)
Translates to: LGSQQKWTTFPVLSPLSPITPRI*SAPFLF
Trigger: AAAAAGAAAAGGTGCACTCCAGATTCTAGGGGTGAT...GGGAGAAAGTGGGGATAGAACAGGAAATGTTGTCCACTTTTGTTGAGACCCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp ACCAGTAGCCACATAACATCTAGCAGGTACAATTTTGTGCCAGCTTGGCTTTTGTTCCAAAATTTACTGTaGCAGGTAACTGCTGAGTGC +
Preference number: 2 (lower is better)
Translates to: TSSHITSSRYNFVPAWLLFQNLL*QVTAEC
Trigger: GCACTCAGCAGTTACCTGCCACAGTAAATTTTGGAA...CAAAAGCCAAGCTGGCACAAAATTGTACCTGCTAGATGTTATGTGGCTACTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp AGGGAGTGTAGGGTTTGGGAATTCCAAAATTTACTGTGGCAGGTAACTGCTGAGTTTCAGATAAGAGCTTaGGTCTCAACAAAAGTGGAC +
Preference number: 2 (lower is better)
Translates to: RECRVWEFQNLLWQVTAEFQIRA*VSTKVD
Trigger: GTCCACTTTTGTTGAGACCCAAGCTCTTATCTGAAA...CTCAGCAGTTACCTGCCACAGTAAATTTTGGAATTCCCAAACCCTACACTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp CCCATTCTCTATGCTAACCTTGGGATAACTTCACATCATGACAATTCCAAACTGAAGCAATGTGGCTACTaGGAAATGGAGGTACAGCTG +
Preference number: 2 (lower is better)
Translates to: PILYANLGITSHHDNSKLKQCGY*EMEVQL
Trigger: CAGCTGTACCTCCATTTCCCAGTAGCCACATTGCTT...CAGTTTGGAATTGTCATGATGTGAAGTTATCCCAAGGTTAGCATAGAGAATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp TTTCAGATAAGAGCTTGGGTCTCAACAAAAGTGGACAACATTTCCTGTTCTATCTATTGCCCAGGTCTTTaGCACAAGGACTTGCCTTCT +
Preference number: 2 (lower is better)
Translates to: FQIRAWVSTKVDNISCSIYCPGL*HKDLPS
Trigger: AGAAGGCAAGTCCTTGTGGCAAAGACCTGGGCAATA...GATAGAACAGGAAATGTTGTCCACTTTTGTTGAGACCCAAGCTCTTATCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp TTTCAGATAAGAGCTTGGGTCTCAACAAAAGTGGACAACATTTCCTGTTCTATCGCATGTGGTCATTCCTaGATGATTCCAAGCCAAAGC +
Preference number: 2 (lower is better)
Translates to: FQIRAWVSTKVDNISCSIACGHS*MIPSQS
Trigger: GCTTTGGCTTGGAATCATGCAGGAATGACCACATGC...GATAGAACAGGAAATGTTGTCCACTTTTGTTGAGACCCAAGCTCTTATCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp GATATTCTTGATGCATTTCAGGGATGCATTTCCCATCTCCTCAAAAAGAAATACGGGCATTTCTCTTTGTaGCTGCAACGCCAGTATACC +
Preference number: 2 (lower is better)
Translates to: DILDAFQGCISHLLKKKYGHFSL*LQRQYT
Trigger: GGTATACTGGCGTTGCAGCCACAAAGAGAAATGCCC...GTATTTCTTTTTGAGGAGATGGGAAATGCATCCCTGAAATGCATCAAGAATATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp TTTGAGCCTCTAGTAGGTTATAGTGCAATGCAGCAAGAATGCCTCTTCTGTCAACACCTTTTCTTTTTGTaGCCTACTGTCTTGGATCCT +
Preference number: 2 (lower is better)
Translates to: FEPLVGYSAMQQECLFCQHLFFL*PTVLDP
Trigger: AGGATCCAAGACAGTAGGCCACAAAAAGAAAAGGTG...TTGACAGAAGAGGCATTCTTGCTGCATTGCACTATAACCTACTAGAGGCTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp TGCCACCGATCTTCAAACTCTAAGGGGCTTTTGGAGGTTATCCAGTTTAACCATTTTCAGATAAGAGCTTaGGTCTCAACAAAAGTGGAC +
Preference number: 2 (lower is better)
Translates to: CHRSSNSKGLLEVIQFNHFQIRA*VSTKVD
Trigger: GTCCACTTTTGTTGAGACCCAAGCTCTTATCTGAAA...ATGGTTAAACTGGATAACCTCCAAAAGCCCCTTAGAGTTTGAAGATCGGTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp GATATTCTTGATGCATTTCAGGGATGCATTTCCCATCTCCTCAAAAAGAAATACTCATCCTGGAGTCACTaGGGAATAAATAGCATGGGG +
Preference number: 2 (lower is better)
Translates to: DILDAFQGCISHLLKKKYSSWSH*GINSMG
Trigger: CCCCATGCTATTTATTCCCCAGTGACTCCAGGATGA...GTATTTCTTTTTGAGGAGATGGGAAATGCATCCCTGAAATGCATCAAGAATATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp TGGCCTACTGTCTTGGATCCTCATTTTAGTGCAACAAATGATACATCTGATGAGCACCTTTTCTTTTTGTaGCCTACTGTCTTGGATCCT +
Preference number: 2 (lower is better)
Translates to: WPTVLDPHFSATNDTSDEHLFFL*PTVLDP
Trigger: AGGATCCAAGACAGTAGGCCACAAAAAGAAAAGGTG...CTCATCAGATGTATCATTTGTTGCACTAAAATGAGGATCCAAGACAGTAGGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp CCCATTCTCTATGCTAACCTTGGGATAACTTCACATCATGACAATTCCAAACTGTTCCAAAATTTACTGTaGCAGGTAACTGCTGAGTGC +
Preference number: 2 (lower is better)
Translates to: PILYANLGITSHHDNSKLFQNLL*QVTAEC
Trigger: GCACTCAGCAGTTACCTGCCACAGTAAATTTTGGAA...CAGTTTGGAATTGTCATGATGTGAAGTTATCCCAAGGTTAGCATAGAGAATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp CCCATTCTCTATGCTAACCTTGGGATAACTTCACATCATGACAATTCCAAACTGATAGCCATGTGGCTTTaGAATGGTGCTCTTAGGTTT +
Preference number: 2 (lower is better)
Translates to: PILYANLGITSHHDNSKLIAMWL*NGALRF
Trigger: AAACCTAAGAGCACCATTCCAAAGCCACATGGCTAT...CAGTTTGGAATTGTCATGATGTGAAGTTATCCCAAGGTTAGCATAGAGAATGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR GCA 90 bp GATATTCTTGATGCATTTCAGGGATGCATTTCCCATCTCCTCAAAAAGAAATACCCTAGCATAAGACAATaGAGGAAAACTGGTGGAGGT +
Preference number: 2 (lower is better)
Translates to: DILDAFQGCISHLLKKKYPSIRQ*RKTGGG
Trigger: ACCTCCACCAGTTTTCCTGCATTGTCTTATGCTAGG...GTATTTCTTTTTGAGGAGATGGGAAATGCATCCCTGAAATGCATCAAGAATATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp CCCATTCTCTATGCTAACCTTGGGATAACTTCACATCATGACAATTCCAAACTGTTTCAGATAAGAGCTTaGGTCTCAACAAAAGTGGAC +
Preference number: 2 (lower is better)
Translates to: PILYANLGITSHHDNSKLFQIRA*VSTKVD
Trigger: GTCCACTTTTGTTGAGACCCAAGCTCTTATCTGAAA...CAGTTTGGAATTGTCATGATGTGAAGTTATCCCAAGGTTAGCATAGAGAATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp GATATTCTTGATGCATTTCAGGGATGCATTTCCCATCTCCTCAAAAAGAAATACCACCTTTTCTTTTTGTaGCCTACTGTCTTGGATCCT +
Preference number: 2 (lower is better)
Translates to: DILDAFQGCISHLLKKKYHLFFL*PTVLDP
Trigger: AGGATCCAAGACAGTAGGCCACAAAAAGAAAAGGTG...GTATTTCTTTTTGAGGAGATGGGAAATGCATCCCTGAAATGCATCAAGAATATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CCA 90 bp GATATTCTTGATGCATTTCAGGGATGCATTTCCCATCTCCTCAAAAAGAAATACATCACCCCTAGAATCTaGAGTGCACCTTTTCTTTTT +
Preference number: 2 (lower is better)
Translates to: DILDAFQGCISHLLKKKYITPRI*SAPFLF
Trigger: AAAAAGAAAAGGTGCACTCCAGATTCTAGGGGTGAT...GTATTTCTTTTTGAGGAGATGGGAAATGCATCCCTGAAATGCATCAAGAATATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp CTGCTGAGTCTGGAGGTGGGGGCCTGCCTGCACACTGTCCTAGGTGGGCCAGTTGGAAGACAGAAGACCTaGCCCCACATAGCAGCTCGT +
Preference number: 3 (lower is better)
Translates to: LLSLEVGACLHTVLGGPVGRQKT*PHIAAR
Trigger: ACGAGCTGCTATGTGGGGCAAGGTCTTCTGTCTTCC...AACTGGCCCACCTAGGACAGTGTGCAGGCAGGCCCCCACCTCCAGACTCAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp CTGCTGAGTCTGGAGGTGGGGGCCTGCCTGCACACTGTCCTAGGTGGGCCAGTTCCTGAAGCTAGGCAATaGGAAAGAAGTCTCATGAAC +
Preference number: 3 (lower is better)
Translates to: LLSLEVGACLHTVLGGPVPEARQ*ERSLMN
Trigger: GTTCATGAGACTTCTTTCCAATTGCCTAGCTTCAGG...AACTGGCCCACCTAGGACAGTGTGCAGGCAGGCCCCCACCTCCAGACTCAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp TTCTGTAGTAGGCATGGCCCAGGGAAAGCCCAGGCAAGGGTGGGACCTCAGGCACCACATAGCAGCTCGTaGTGTGATGGTTGCTGCTTT +
Preference number: 3 (lower is better)
Translates to: FCSRHGPGKAQARVGPQAPHSSS*CDGCCF
Trigger: AAAGCAGCAACCATCACACAACGAGCTGCTATGTGG...TGCCTGAGGTCCCACCCTTGCCTGGGCTTTCCCTGGGCCATGCCTACTACAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp TTCTGTAGTAGGCATGGCCCAGGGAAAGCCCAGGCAAGGGTGGGACCTCAGGCAAGGATGGGATGTAGGTaGGGCTGCATTCCCTCTAAA +
Preference number: 3 (lower is better)
Translates to: FCSRHGPGKAQARVGPQARMGCR*GCIPSK
Trigger: TTTAGAGGGAATGCAGCCCAACCTACATCCCATCCT...TGCCTGAGGTCCCACCCTTGCCTGGGCTTTCCCTGGGCCATGCCTACTACAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR TCA 72 bp ATGGGAGAATCTAGGATGCAGGGGCTTCGCCCAGCCTaGTGGCCCCGAAGAAGGTGGTGTGCTTGCTCATAT +
Preference number: 3 (lower is better)
Translates to: MGESRMQGLRPA*WPRRRWCACSY
Trigger: ATATGAGCAAGCACACCACCTTCTTCGGGGCCATCAGGCTGGGCGAAGCCCCTGCATCCTAGATTCTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
3UTR GCA 72 bp GCTTCGCCCAGCCTGATGGCCCCGAAGAAGGTGGTGTaGTTGCTCATATTGATAGAGATGTCAGCGTGCACC +
Preference number: 3 (lower is better)
Translates to: ASPSLMAPKKVV*LLILIEMSACT
Trigger: GGTGCACGCTGACATCTCTATCAATATGAGCAAGCACACCACCTTCTTCGGGGCCATCAGGCTGGGCGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
3UTR-3UTR CAA 90 bp AGCCTAAGAAGGTTCTGCTTCTTGACAACCCTGGGGCTCCGTCAACTGTCCTGGAGAAGGTTCTGCTTCTaGACAACCCTGGGGCTCCGT +
Preference number: 3 (lower is better)
Translates to: SLRRFCFLTTLGLRQLSWRRFCF*TTLGLR
Trigger: ACGGAGCCCCAGGGTTGTCAAGAAGCAGAACCTTCT...CCAGGACAGTTGACGGAGCCCCAGGGTTGTCAAGAAGCAGAACCTTCTTAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR TCA 72 bp CGTGCACCATCTTCACGGCGATTTTCTGCCTGGCCTTaGGGAGGCACACGCCTGCAGTATAGCAAGTGTTGT +
Preference number: 3 (lower is better)
Translates to: RAPSSRRFSAWP*GGTRLQYSKCC
Trigger: ACAACACTTGCTATACTGCAGGCGTGTGCCTCCTCAAGGCCAGGCAGAAAATCGCCGTGAAGATGGTGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
3UTR CCA 72 bp GCAGACAGATGCTCTAGGAAAGCACCGCAGAAAGACTaGGCTAGTGGGCCATGGCCTGCTGCTCTTTCAGAT +
Preference number: 3 (lower is better)
Translates to: ADRCSRKAPQKD*ASGPWPAALSD
Trigger: ATCTGAAAGAGCAGCAGGCCATGGCCCACTAGCCCAGTCTTTCTGCGGTGCTTTCCTAGAGCATCTGTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CCA 72 bp GCTTCCAGCCCAGAGGCAGGAGGTGCACAAATATCTTaGGGGACTATGTGTGGGGAGGCAAGTTGTGATGGA +
Preference number: 3 (lower is better)
Translates to: ASSPEAGGAQIS*GTMCGEASCDG
Trigger: TCCATCACAACTTGCCTCCCCACACATAGTCCCCCAAGATATTTGTGCACCTCCTGCCTCTGGGCTGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CCA 72 bp GGAGGCACACGCCTGCAGTATAGCAAGTGTTGTAGTTaGTCTTCCCTGTCTCAATGCTGCGGGTGCACTGCA +
Preference number: 3 (lower is better)
Translates to: GGTRLQYSKCCS*SSLSQCCGCTA
Trigger: TGCAGTGCACCCGCAGCATTGAGACAGGGAAGACCAACTACAACACTTGCTATACTGCAGGCGTGTGCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
3UTR-3UTR CAA 90 bp TATTGCCCAGGTCTTTGCCACAAGGACTTGCCTTCTTCTGACCTGACCCTCTCCAGAAGGTTCTGCTTCTaGACAACCCTGGGGCTCCGT +
Preference number: 3 (lower is better)
Translates to: YCPGLCHKDLPSSDLTLSRRFCF*TTLGLR
Trigger: ACGGAGCCCCAGGGTTGTCAAGAAGCAGAACCTTCT...GGAGAGGGTCAGGTCAGAAGAAGGCAAGTCCTTGTGGCAAAGACCTGGGCAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp CAAATCAGGTTCTGTAGTAGGCATGGCCCAGGGAAAGCCCAGGCAAGGGTGGGACCACATAGCAGCTCGTaGTGTGATGGTTGCTGCTTT +
Preference number: 3 (lower is better)
Translates to: QIRFCSRHGPGKAQARVGPHSSS*CDGCCF
Trigger: AAAGCAGCAACCATCACACAACGAGCTGCTATGTGG...TCCCACCCTTGCCTGGGCTTTCCCTGGGCCATGCCTACTACAGAACCTGATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR TCA 72 bp CCTTCTGCATCTGGGGCTCCTTGTGAGGATTCAGGATaGAGACAGGGTAGTGAGAAGCCCACTTCCCCTATG +
Preference number: 3 (lower is better)
Translates to: PSASGAPCEDSG*RQGSEKPTSPM
Trigger: CATAGGGGAAGTGGGCTTCTCACTACCCTGTCTTCATCCTGAATCCTCACAAGGAGCCCCAGATGCAGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CCA 72 bp GACCTCAGGCAACACAAGAGAAGCCTAAAATCTGTCTaGCTCAGAGCCAGCCTAAAGCTTCCAGCCCAGAGG +
Preference number: 3 (lower is better)
Translates to: DLRQHKRSLKSV*LRASLKLPAQR
Trigger: CCTCTGGGCTGGAAGCTTTAGGCTGGCTCTGAGCCAGACAGATTTTAGGCTTCTCTTGTGTTGCCTGAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp ATGATTCCAAGCCAAAGCAAAGTTCCCAGCTCTGGAGTCCAGCAAGCTGCCACAAGAAGGTTCTGCTTCTaGACAACCCTGGGGCTCCGT +
Preference number: 3 (lower is better)
Translates to: MIPSQSKVPSSGVQQAATRRFCF*TTLGLR
Trigger: ACGGAGCCCCAGGGTTGTCAAGAAGCAGAACCTTCT...TGTGGCAGCTTGCTGGACTCCAGAGCTGGGAACTTTGCTTTGGCTTGGAATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp CACAGAGCATATGATGGGGTTGGCATGTCCTGCAGGGGCACAGTTAGGAAACTTGACCCTCTCCTTAAGTaGCAACCTAATGGCACCCCC +
Preference number: 3 (lower is better)
Translates to: HRAYDGVGMSCRGTVRKLDPLLK*QPNGTP
Trigger: GGGGGTGCCATTAGGTTGCAACTTAAGGAGAGGGTC...AAGTTTCCTAACTGTGCCCCTGCAGGACATGCCAACCCCATCATATGCTCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR GCA 72 bp GACTTGCCTTCTTCTGACCTGACCCTCTCCTTAAGTTaGAACCTAATGGCACCCCCAGCCAGGAGAGAAGAA +
Preference number: 3 (lower is better)
Translates to: DLPSSDLTLSLS*NLMAPPARREE
Trigger: TTCTTCTCTCCTGGCTGGGGGTGCCATTAGGTTGCAACTTAAGGAGAGGGTCAGGTCAGAAGAAGGCAAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR GCA 72 bp CCAAAGCAAAGTTCCCAGCTCTGGAGTCCAGCAAGCTaGCACAGTATACCTCTCAGCCTGAGTGGGAAGTTT +
Preference number: 3 (lower is better)
Translates to: PKQSSQLWSPAS*HSIPLSLSGKF
Trigger: AAACTTCCCACTCAGGCTGAGAGGTATACTGTGGCAGCTTGCTGGACTCCAGAGCTGGGAACTTTGCTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR GCA 72 bp GAGGCAAGTTGTGATGGAGATTGTAGACCCACTCCCTaGCTCACCAGGCTCCTGAAGGGAGATAAACACTTC +
Preference number: 3 (lower is better)
Translates to: EASCDGDCRPTP*LTRLLKGDKHF
Trigger: GAAGTGTTTATCTCCCTTCAGGAGCCTGGTGAGGCAGGGAGTGGGTCTACAATCTCCATCACAACTTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CCA 72 bp CTGCATGATTCCAAGCCAAAGCAAAGTTCCCAGCTCTaGAGTCCAGCAAGCTGCCACAGTATACCTCTCAGC +
Preference number: 3 (lower is better)
Translates to: LHDSKPKQSSQL*SPASCHSIPLS
Trigger: GCTGAGAGGTATACTGTGGCAGCTTGCTGGACTCCAGAGCTGGGAACTTTGCTTTGGCTTGGAATCATGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CCA 72 bp TATCTCACACAGGATGCTGATTCCCCAAAGCAGCATTaGGCCTGCTCCAGGCCATTCTCCCCTTATCCTCAT +
Preference number: 3 (lower is better)
Translates to: YLTQDADSPKQH*ACSRPFSPYPH
Trigger: ATGAGGATAAGGGGAGAATGGCCTGGAGCAGGCCCAATGCTGCTTTGGGGAATCAGCATCCTGTGTGAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp GTTCTTGCTACCACTGCTGATTGTTCAAGGCCTCCAAGGGCAGATGCATGTCTAAGAAGGTTCTGCTTCTaGACAACCCTGGGGCTCCGT +
Preference number: 3 (lower is better)
Translates to: VLATTADCSRPPRADACLRRFCF*TTLGLR
Trigger: ACGGAGCCCCAGGGTTGTCAAGAAGCAGAACCTTCT...TAGACATGCATCTGCCCTTGGAGGCCTTGAACAATCAGCAGTGGTAGCAAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp GTCAGCAGGGAGCCTAAGAAGGTTCTGCTTCTTGACAACCCTGGGGCTCCGTCATTGTGGCCTACTGTCTaGGATCCTCATTTTAGTGCA +
Preference number: 3 (lower is better)
Translates to: VSREPKKVLLLDNPGAPSLWPTV*DPHFSA
Trigger: TGCACTAAAATGAGGATCCAAGACAGTAGGCCACAA...TGACGGAGCCCCAGGGTTGTCAAGAAGCAGAACCTTCTTAGGCTCCCTGCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp CAAATCAGGTTCTGTAGTAGGCATGGCCCAGGGAAAGCCCAGGCAAGGGTGGGACCTGAAGCTAGGCAATaGGAAAGAAGTCTCATGAAC +
Preference number: 3 (lower is better)
Translates to: QIRFCSRHGPGKAQARVGPEARQ*ERSLMN
Trigger: GTTCATGAGACTTCTTTCCAATTGCCTAGCTTCAGG...TCCCACCCTTGCCTGGGCTTTCCCTGGGCCATGCCTACTACAGAACCTGATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp TTGGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCGGAAGACAGAAGACCTaGCCCCACATAGCAGCTCGT +
Preference number: 3 (lower is better)
Translates to: LACPAGAQLGNFLYFSIAGRQKT*PHIAAR
Trigger: ACGAGCTGCTATGTGGGGCAAGGTCTTCTGTCTTCC...GGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp CCAGAACTAGTAGCTAGGGTCAGGAATGGAAGACAGAAGACCTTGCCCCACATAGGAAGACAGAAGACCTaGCCCCACATAGCAGCTCGT +
Preference number: 3 (lower is better)
Translates to: PELVARVRNGRQKTLPHIGRQKT*PHIAAR
Trigger: ACGAGCTGCTATGTGGGGCAAGGTCTTCTGTCTTCC...TATGTGGGGCAAGGTCTTCTGTCTTCCATTCCTGACCCTAGCTACTAGTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp CAAATCAGGTTCTGTAGTAGGCATGGCCCAGGGAAAGCCCAGGCAAGGGTGGGACAATTTTGTGCCAGCTaGGCTTTTGAAGCTCAAGCA +
Preference number: 3 (lower is better)
Translates to: QIRFCSRHGPGKAQARVGQFCAS*AFEAQA
Trigger: TGCTTGAGCTTCAAAAGCCAAGCTGGCACAAAATTG...TCCCACCCTTGCCTGGGCTTTCCCTGGGCCATGCCTACTACAGAACCTGATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp GTAGAAAAGCTATACTGTGCTGATGCCCAAGGGAGTGTAGGGTTTGGGAATTCCAGAAGGTTCTGCTTCTaGACAACCCTGGGGCTCCGT +
Preference number: 3 (lower is better)
Translates to: VEKLYCADAQGSVGFGNSRRFCF*TTLGLR
Trigger: ACGGAGCCCCAGGGTTGTCAAGAAGCAGAACCTTCT...GGAATTCCCAAACCCTACACTCCCTTGGGCATCAGCACAGTATAGCTTTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp CATATGATGGGGTTGGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATCTTTGCCACAAGGACTaGCCTTCTTCTGACCTGACC +
Preference number: 3 (lower is better)
Translates to: HMMGLACPAGAQLGNFLYLCHKD*PSSDLT
Trigger: GGTCAGGTCAGAAGAAGGCAAGTCCTTGTGGCAAAG...ATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCCAACCCCATCATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp GCTACCACTGCTGATTGTTCAAGGCCTCCAAGGGCAGATGCATGTCTAAAATCGCTTTGCCACAAGGACTaGCCTTCTTCTGACCTGACC +
Preference number: 3 (lower is better)
Translates to: ATTADCSRPPRADACLKSLCHKD*PSSDLT
Trigger: GGTCAGGTCAGAAGAAGGCAAGTCCTTGTGGCAAAG...CGATTTTAGACATGCATCTGCCCTTGGAGGCCTTGAACAATCAGCAGTGGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp GCACAAATATCTTGGGGGACTATGTGTGGGGAGGCAAGTTGTGATGGAGATTGTGGAAGACAGAAGACCTaGCCCCACATAGCAGCTCGT +
Preference number: 3 (lower is better)
Translates to: AQISWGTMCGEASCDGDCGRQKT*PHIAAR
Trigger: ACGAGCTGCTATGTGGGGCAAGGTCTTCTGTCTTCC...ACAATCTCCATCACAACTTGCCTCCCCACACATAGTCCCCCAAGATATTTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR TCA 72 bp TTGCCCAGGTCTTTGCCACAAGGACTTGCCTTCTTCTaGCCTGACCCTCTCCTTAAGTTGCAACCTAATGGC +
Preference number: 3 (lower is better)
Translates to: LPRSLPQGLAFF*PDPLLKLQPNG
Trigger: GCCATTAGGTTGCAACTTAAGGAGAGGGTCAGGTCAGAAGAAGGCAAGTCCTTGTGGCAAAGACCTGGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR TCA 72 bp CCCCTCCCTGGGAAAGGTAGAAAAGCTATACTGTGCTaGTGCCCAAGGGAGTGTAGGGTTTGGGAATTCCAA +
Preference number: 3 (lower is better)
Translates to: PLPGKGRKAILC*CPRECRVWEFQ
Trigger: TTGGAATTCCCAAACCCTACACTCCCTTGGGCATCAGCACAGTATAGCTTTTCTACCTTTCCCAGGGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp GCTACCACTGCTGATTGTTCAAGGCCTCCAAGGGCAGATGCATGTCTAAAATCGATGGGGCATTTCTCTTaGTGGCTGCAACGCCAGTAT +
Preference number: 3 (lower is better)
Translates to: ATTADCSRPPRADACLKSMGHFS*WLQRQY
Trigger: ATACTGGCGTTGCAGCCACAAAGAGAAATGCCCCAT...CGATTTTAGACATGCATCTGCCCTTGGAGGCCTTGAACAATCAGCAGTGGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp CCCACTTTCTCCCCCTCCCTGGGAAAGGTAGAAAAGCTATACTGTGCTGATGCCGTGCACCTTTTCTTTTaGTGGCCTACTGTCTTGGAT +
Preference number: 3 (lower is better)
Translates to: PTFSPSLGKVEKLYCADAVHLFF*WPTVLD
Trigger: ATCCAAGACAGTAGGCCACAAAAAGAAAAGGTGCAC...GGCATCAGCACAGTATAGCTTTTCTACCTTTCCCAGGGAGGGGGAGAAAGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp TCCAAGGGCAGATGCATGTCTAAAATCGACCTCATTTCTGGTTGTAAGGCTGTCGACCCTCTCCTTAAGTaGCAACCTAATGGCACCCCC +
Preference number: 3 (lower is better)
Translates to: SKGRCMSKIDLISGCKAVDPLLK*QPNGTP
Trigger: GGGGGTGCCATTAGGTTGCAACTTAAGGAGAGGGTC...GACAGCCTTACAACCAGAAATGAGGTCGATTTTAGACATGCATCTGCCCTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp ATTCTCGGGAGGGCAACCTCTCAACATCAACAGAGGAAGATGTTCTGGCAACATCTTTGCCACAAGGACTaGCCTTCTTCTGACCTGACC +
Preference number: 3 (lower is better)
Translates to: ILGRATSQHQQRKMFWQHLCHKD*PSSDLT
Trigger: GGTCAGGTCAGAAGAAGGCAAGTCCTTGTGGCAAAG...ATGTTGCCAGAACATCTTCCTCTGTTGATGTTGAGAGGTTGCCCTCCCGAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp TATTGCCCAGGTCTTTGCCACAAGGACTTGCCTTCTTCTGACCTGACCCTCTCCGTCAAGGATATTGACTaGGTAGGTTATTGCCCAGGT +
Preference number: 3 (lower is better)
Translates to: YCPGLCHKDLPSSDLTLSVKDID*VGYCPG
Trigger: ACCTGGGCAATAACCTACCAAGTCAATATCCTTGAC...GGAGAGGGTCAGGTCAGAAGAAGGCAAGTCCTTGTGGCAAAGACCTGGGCAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp TATACACAGTATCTCACACAGGATGCTGATTCCCCAAAGCAGCATTGGGCCTGCGGCAGTACCATAGCATaGCTAGGTTTCTCCCTAGGA +
Preference number: 3 (lower is better)
Translates to: YTQYLTQDADSPKQHWACGSTIA*LGFSLG
Trigger: TCCTAGGGAGAAACCTAGCAATGCTATGGTACTGCC...GCAGGCCCAATGCTGCTTTGGGGAATCAGCATCCTGTGTGAGATACTGTGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp AGCTTGGCTTTTGAAGCTCAAGCAGCTGGTAGAGGCTCCTGCGGTGCAATTTTTGGCAGTACCATAGCATaGCTAGGTTTCTCCCTAGGA +
Preference number: 3 (lower is better)
Translates to: SLAFEAQAAGRGSCGAIFGSTIA*LGFSLG
Trigger: TCCTAGGGAGAAACCTAGCAATGCTATGGTACTGCC...AAAAATTGCACCGCAGGAGCCTCTACCAGCTGCTTGAGCTTCAAAAGCCAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp GCACAAATATCTTGGGGGACTATGTGTGGGGAGGCAAGTTGTGATGGAGATTGTGTGCCAGCTTGGCTTTaGAAGCTCAAGCAGCTGGTA +
Preference number: 3 (lower is better)
Translates to: AQISWGTMCGEASCDGDCVPAWL*KLKQLV
Trigger: TACCAGCTGCTTGAGCTTCAAAAGCCAAGCTGGCAC...ACAATCTCCATCACAACTTGCCTCCCCACACATAGTCCCCCAAGATATTTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR TCA 72 bp GCAACAAATGATACATCTGATGAGGGACCTAAGGGTTaGGGAGTCACCATAAGCCAGTCAGCAGGGAGCCTA +
Preference number: 3 (lower is better)
Translates to: ATNDTSDEGPKG*GVTISQSAGSL
Trigger: TAGGCTCCCTGCTGACTGGCTTATGGTGACTCCTCAACCCTTAGGTCCCTCATCAGATGTATCATTTGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR TCA 72 bp CTAAGGAGAGGGTCTGTTAGTTCTTGCTACCACTGCTaGTTGTTCAAGGCCTCCAAGGGCAGATGCATGTCT +
Preference number: 3 (lower is better)
Translates to: LRRGSVSSCYHC*LFKASKGRCMS
Trigger: AGACATGCATCTGCCCTTGGAGGCCTTGAACAATCAGCAGTGGTAGCAAGAACTAACAGACCCTCTCCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CCA 72 bp GCAGCTCGTTGTGTGATGGTTGCTGCTTTTATCAGATaGGTGAAAGGTCATGAAGGCTCCAAGTTCTGTGGG +
Preference number: 3 (lower is better)
Translates to: AARCVMVAAFIR*VKGHEGSKFCG
Trigger: CCCACAGAACTTGGAGCCTTCATGACCTTTCACCCATCTGATAAAAGCAGCAACCATCACACAACGAGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp ATTCTCGGGAGGGCAACCTCTCAACATCAACAGAGGAAGATGTTCTGGCAACATATGGGGCATTTCTCTTaGTGGCTGCAACGCCAGTAT +
Preference number: 3 (lower is better)
Translates to: ILGRATSQHQQRKMFWQHMGHFS*WLQRQY
Trigger: ATACTGGCGTTGCAGCCACAAAGAGAAATGCCCCAT...ATGTTGCCAGAACATCTTCCTCTGTTGATGTTGAGAGGTTGCCCTCCCGAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp GTAACAGGATGGGATGTAGGTTGGGCTGCATTCCCTCTAAAAGCCTTTCTAGGTATGGGGCATTTCTCTTaGTGGCTGCAACGCCAGTAT +
Preference number: 3 (lower is better)
Translates to: VTGWDVGWAAFPLKAFLGMGHFS*WLQRQY
Trigger: ATACTGGCGTTGCAGCCACAAAGAGAAATGCCCCAT...ACCTAGAAAGGCTTTTAGAGGGAATGCAGCCCAACCTACATCCCATCCTGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp ACCAGTAGCCACATAACATCTAGCAGGTACAATTTTGTGCCAGCTTGGCTTTTGAGAAGGTTCTGCTTCTaGACAACCCTGGGGCTCCGT +
Preference number: 3 (lower is better)
Translates to: TSSHITSSRYNFVPAWLLRRFCF*TTLGLR
Trigger: ACGGAGCCCCAGGGTTGTCAAGAAGCAGAACCTTCT...CAAAAGCCAAGCTGGCACAAAATTGTACCTGCTAGATGTTATGTGGCTACTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp ACAGAAGACCTTGCCCCACATAGCAGCTCGTTGTGTGATGGTTGCTGCTTTTATGGCAGTACCATAGCATaGCTAGGTTTCTCCCTAGGA +
Preference number: 3 (lower is better)
Translates to: TEDLAPHSSSLCDGCCFYGSTIA*LGFSLG
Trigger: TCCTAGGGAGAAACCTAGCAATGCTATGGTACTGCC...ATAAAAGCAGCAACCATCACACAACGAGCTGCTATGTGGGGCAAGGTCTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp ATTCTCGGGAGGGCAACCTCTCAACATCAACAGAGGAAGATGTTCTGGCAACATGGCAGTACCATAGCATaGCTAGGTTTCTCCCTAGGA +
Preference number: 3 (lower is better)
Translates to: ILGRATSQHQQRKMFWQHGSTIA*LGFSLG
Trigger: TCCTAGGGAGAAACCTAGCAATGCTATGGTACTGCC...ATGTTGCCAGAACATCTTCCTCTGTTGATGTTGAGAGGTTGCCCTCCCGAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp GGAAGATGTTCTGGCAACATTAAGGCCTTTGTAATATGGCAGGAGGAGAGGAGGCCACATAGCAGCTCGTaGTGTGATGGTTGCTGCTTT +
Preference number: 3 (lower is better)
Translates to: GRCSGNIKAFVIWQEERRPHSSS*CDGCCF
Trigger: AAAGCAGCAACCATCACACAACGAGCTGCTATGTGG...CCTCCTCTCCTCCTGCCATATTACAAAGGCCTTAATGTTGCCAGAACATCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp GCACAAATATCTTGGGGGACTATGTGTGGGGAGGCAAGTTGTGATGGAGATTGTCCACATAGCAGCTCGTaGTGTGATGGTTGCTGCTTT +
Preference number: 3 (lower is better)
Translates to: AQISWGTMCGEASCDGDCPHSSS*CDGCCF
Trigger: AAAGCAGCAACCATCACACAACGAGCTGCTATGTGG...ACAATCTCCATCACAACTTGCCTCCCCACACATAGTCCCCCAAGATATTTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp ACCAGTAGCCACATAACATCTAGCAGGTACAATTTTGTGCCAGCTTGGCTTTTGGGAAGACAGAAGACCTaGCCCCACATAGCAGCTCGT +
Preference number: 3 (lower is better)
Translates to: TSSHITSSRYNFVPAWLLGRQKT*PHIAAR
Trigger: ACGAGCTGCTATGTGGGGCAAGGTCTTCTGTCTTCC...CAAAAGCCAAGCTGGCACAAAATTGTACCTGCTAGATGTTATGTGGCTACTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR TCA 72 bp GAGATAAACACTTCTAGCTTTGATTCTGTGGGTGTATaGAAGAGGAGGCCCCATGGGACAGGTTGCTTTGCC +
Preference number: 3 (lower is better)
Translates to: EINTSSFDSVGV*KRRPHGTGCFA
Trigger: GGCAAAGCAACCTGTCCCATGGGGCCTCCTCTTTCATACACCCACAGAATCAAAGCTAGAAGTGTTTATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR GCA 72 bp AAGGATATTGACTTGGTAGGTTATTGCCCAGGTCTTTaGCACAAGGACTTGCCTTCTTCTGACCTGACCCTC +
Preference number: 3 (lower is better)
Translates to: KDIDLVGYCPGL*HKDLPSSDLTL
Trigger: GAGGGTCAGGTCAGAAGAAGGCAAGTCCTTGTGGCAAAGACCTGGGCAATAACCTACCAAGTCAATATCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CCA 72 bp CACTGGGGAATAAATAGCATGGGGCATTTCTCTTTGTaGCTGCAACGCCAGTATACCTCATTCCACACACAG +
Preference number: 3 (lower is better)
Translates to: HWGINSMGHFSL*LQRQYTSFHTQ
Trigger: CTGTGTGTGGAATGAGGTATACTGGCGTTGCAGCCACAAAGAGAAATGCCCCATGCTATTTATTCCCCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CCA 72 bp GTGGGCCATGGCCTGCTGCTCTTTCAGATAAGAGCTTaGGTCTCAACAAAAGTGGACAACATTTCCTGTTCT +
Preference number: 3 (lower is better)
Translates to: VGHGLLLFQIRA*VSTKVDNISCS
Trigger: AGAACAGGAAATGTTGTCCACTTTTGTTGAGACCCAAGCTCTTATCTGAAAGAGCAGCAGGCCATGGCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CCA 72 bp AAAAAGAAATACATTTCAGGAGCAAGAGGAACCGGCTaGACCAGGTTGATCCTTCCAGCTTTAGGCTGTGCC +
Preference number: 3 (lower is better)
Translates to: KKKYISGARGTG*TRLILPALGCA
Trigger: GGCACAGCCTAAAGCTGGAAGGATCAACCTGGTCCAGCCGGTTCCTCTTGCTCCTGAAATGTATTTCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp GGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCATTTGTGGCCTACTGTCTaGGATCCTCATTTTAGTGCA +
Preference number: 3 (lower is better)
Translates to: GMSCRGTVRKLPLFLHSHLWPTV*DPHFSA
Trigger: TGCACTAAAATGAGGATCCAAGACAGTAGGCCACAA...ATGGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp GCTACCACTGCTGATTGTTCAAGGCCTCCAAGGGCAGATGCATGTCTAAAATCGGTGCACCTTTTCTTTTaGTGGCCTACTGTCTTGGAT +
Preference number: 3 (lower is better)
Translates to: ATTADCSRPPRADACLKSVHLFF*WPTVLD
Trigger: ATCCAAGACAGTAGGCCACAAAAAGAAAAGGTGCAC...CGATTTTAGACATGCATCTGCCCTTGGAGGCCTTGAACAATCAGCAGTGGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp TATACACAGTATCTCACACAGGATGCTGATTCCCCAAAGCAGCATTGGGCCTGCGTGCACCTTTTCTTTTaGTGGCCTACTGTCTTGGAT +
Preference number: 3 (lower is better)
Translates to: YTQYLTQDADSPKQHWACVHLFF*WPTVLD
Trigger: ATCCAAGACAGTAGGCCACAAAAAGAAAAGGTGCAC...GCAGGCCCAATGCTGCTTTGGGGAATCAGCATCCTGTGTGAGATACTGTGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp ACCTTGCCCCACATAGCAGCTCGTTGTGTGATGGTTGCTGCTTTTATCAGATGGGTGCACCTTTTCTTTTaGTGGCCTACTGTCTTGGAT +
Preference number: 3 (lower is better)
Translates to: TLPHIAARCVMVAAFIRWVHLFF*WPTVLD
Trigger: ATCCAAGACAGTAGGCCACAAAAAGAAAAGGTGCAC...CCATCTGATAAAAGCAGCAACCATCACACAACGAGCTGCTATGTGGGGCAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp AGTTTTCTGAGAGTGGAACATAGCTGTAAACACAATGAGACATGCATGACCCCAGACCCTCTCCTTAAGTaGCAACCTAATGGCACCCCC +
Preference number: 3 (lower is better)
Translates to: SFLRVEHSCKHNETCMTPDPLLK*QPNGTP
Trigger: GGGGGTGCCATTAGGTTGCAACTTAAGGAGAGGGTC...TGGGGTCATGCATGTCTCATTGTGTTTACAGCTATGTTCCACTCTCAGAAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp GGTGCACAAATATCTTGGGGGACTATGTGTGGGGAGGCAAGTTGTGATGGAGATGTCAAGGATATTGACTaGGTAGGTTATTGCCCAGGT +
Preference number: 3 (lower is better)
Translates to: GAQISWGTMCGEASCDGDVKDID*VGYCPG
Trigger: ACCTGGGCAATAACCTACCAAGTCAATATCCTTGAC...ATCTCCATCACAACTTGCCTCCCCACACATAGTCCCCCAAGATATTTGTGCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp GGAAGATGTTCTGGCAACATTAAGGCCTTTGTAATATGGCAGGAGGAGAGGAGGTTGTGGCCTACTGTCTaGGATCCTCATTTTAGTGCA +
Preference number: 3 (lower is better)
Translates to: GRCSGNIKAFVIWQEERRLWPTV*DPHFSA
Trigger: TGCACTAAAATGAGGATCCAAGACAGTAGGCCACAA...CCTCCTCTCCTCCTGCCATATTACAAAGGCCTTAATGTTGCCAGAACATCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp TGGCCTACTGTCTTGGATCCTCATTTTAGTGCAACAAATGATACATCTGATGAGGACCCTCTCCTTAAGTaGCAACCTAATGGCACCCCC +
Preference number: 3 (lower is better)
Translates to: WPTVLDPHFSATNDTSDEDPLLK*QPNGTP
Trigger: GGGGGTGCCATTAGGTTGCAACTTAAGGAGAGGGTC...CTCATCAGATGTATCATTTGTTGCACTAAAATGAGGATCCAAGACAGTAGGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp TTTGAGCCTCTAGTAGGTTATAGTGCAATGCAGCAAGAATGCCTCTTCTGTCAACTTTGCCACAAGGACTaGCCTTCTTCTGACCTGACC +
Preference number: 3 (lower is better)
Translates to: FEPLVGYSAMQQECLFCQLCHKD*PSSDLT
Trigger: GGTCAGGTCAGAAGAAGGCAAGTCCTTGTGGCAAAG...TTGACAGAAGAGGCATTCTTGCTGCATTGCACTATAACCTACTAGAGGCTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp ATTCTCGGGAGGGCAACCTCTCAACATCAACAGAGGAAGATGTTCTGGCAACATGTCAAGGATATTGACTaGGTAGGTTATTGCCCAGGT +
Preference number: 3 (lower is better)
Translates to: ILGRATSQHQQRKMFWQHVKDID*VGYCPG
Trigger: ACCTGGGCAATAACCTACCAAGTCAATATCCTTGAC...ATGTTGCCAGAACATCTTCCTCTGTTGATGTTGAGAGGTTGCCCTCCCGAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp ATTCTCGGGAGGGCAACCTCTCAACATCAACAGAGGAAGATGTTCTGGCAACATCCTGAAGCTAGGCAATaGGAAAGAAGTCTCATGAAC +
Preference number: 3 (lower is better)
Translates to: ILGRATSQHQQRKMFWQHPEARQ*ERSLMN
Trigger: GTTCATGAGACTTCTTTCCAATTGCCTAGCTTCAGG...ATGTTGCCAGAACATCTTCCTCTGTTGATGTTGAGAGGTTGCCCTCCCGAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp ACAGAAGACCTTGCCCCACATAGCAGCTCGTTGTGTGATGGTTGCTGCTTTTATCCTGAAGCTAGGCAATaGGAAAGAAGTCTCATGAAC +
Preference number: 3 (lower is better)
Translates to: TEDLAPHSSSLCDGCCFYPEARQ*ERSLMN
Trigger: GTTCATGAGACTTCTTTCCAATTGCCTAGCTTCAGG...ATAAAAGCAGCAACCATCACACAACGAGCTGCTATGTGGGGCAAGGTCTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp GCTACCACTGCTGATTGTTCAAGGCCTCCAAGGGCAGATGCATGTCTAAAATCGCAGTACCTGATATTCTaGATGCATTTCAGGGATGCA +
Preference number: 3 (lower is better)
Translates to: ATTADCSRPPRADACLKSQYLIF*MHFRDA
Trigger: TGCATCCCTGAAATGCATCAAGAATATCAGGTACTG...CGATTTTAGACATGCATCTGCCCTTGGAGGCCTTGAACAATCAGCAGTGGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp TTGGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCCAGTACCTGATATTCTaGATGCATTTCAGGGATGCA +
Preference number: 3 (lower is better)
Translates to: LACPAGAQLGNFLYFSIAQYLIF*MHFRDA
Trigger: TGCATCCCTGAAATGCATCAAGAATATCAGGTACTG...GGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp GGTGCACAAATATCTTGGGGGACTATGTGTGGGGAGGCAAGTTGTGATGGAGATCAGTACCTGATATTCTaGATGCATTTCAGGGATGCA +
Preference number: 3 (lower is better)
Translates to: GAQISWGTMCGEASCDGDQYLIF*MHFRDA
Trigger: TGCATCCCTGAAATGCATCAAGAATATCAGGTACTG...ATCTCCATCACAACTTGCCTCCCCACACATAGTCCCCCAAGATATTTGTGCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp GTAACAGGATGGGATGTAGGTTGGGCTGCATTCCCTCTAAAAGCCTTTCTAGGTCAATTTTGTGCCAGCTaGGCTTTTGAAGCTCAAGCA +
Preference number: 3 (lower is better)
Translates to: VTGWDVGWAAFPLKAFLGQFCAS*AFEAQA
Trigger: TGCTTGAGCTTCAAAAGCCAAGCTGGCACAAAATTG...ACCTAGAAAGGCTTTTAGAGGGAATGCAGCCCAACCTACATCCCATCCTGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CCA 72 bp TCCAGCAAGCTGCCACAGTATACCTCTCAGCCTGAGTaGGAAGTTTTCTTTGAGCCTCTAGTAGGTTATAGT +
Preference number: 3 (lower is better)
Translates to: SSKLPQYTSQPE*EVFFEPLVGYS
Trigger: ACTATAACCTACTAGAGGCTCAAAGAAAACTTCCCACTCAGGCTGAGAGGTATACTGTGGCAGCTTGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CCA 72 bp CTGAGTGCCACCGATCTTCAAACTCTAAGGGGCTTTTaGAGGTTATCCAGTTTAACCATCTGTTCCCAGACA +
Preference number: 3 (lower is better)
Translates to: LSATDLQTLRGF*RLSSLTICSQT
Trigger: TGTCTGGGAACAGATGGTTAAACTGGATAACCTCCAAAAGCCCCTTAGAGTTTGAAGATCGGTGGCACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CCA 72 bp AGGGAGTGTAGGGTTTGGGAATTCCAAAATTTACTGTaGCAGGTAACTGCTGAGTGCCACCGATCTTCAAAC +
Preference number: 3 (lower is better)
Translates to: RECRVWEFQNLL*QVTAECHRSSN
Trigger: GTTTGAAGATCGGTGGCACTCAGCAGTTACCTGCCACAGTAAATTTTGGAATTCCCAAACCCTACACTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CCA 72 bp GGAAACTTCCTCTATTTCTCCATAGCCATGTGGCTTTaGAATGGTGCTCTTAGGTTTTCCCTCCATTCTCGG +
Preference number: 3 (lower is better)
Translates to: GNFLYFSIAMWL*NGALRFSLHSR
Trigger: CCGAGAATGGAGGGAAAACCTAAGAGCACCATTCCAAAGCCACATGGCTATGGAGAAATAGAGGAAGTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CCA 72 bp CACATAACATCTAGCAGGTACAATTTTGTGCCAGCTTaGCTTTTGAAGCTCAAGCAGCTGGTAGAGGCTCCT +
Preference number: 3 (lower is better)
Translates to: HITSSRYNFVPA*LLKLKQLVEAP
Trigger: AGGAGCCTCTACCAGCTGCTTGAGCTTCAAAAGCCAAGCTGGCACAAAATTGTACCTGCTAGATGTTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp CCTCTAGTAGGTTATAGTGCAATGCAGCAAGAATGCCTCTTCTGTCAAGGATATATGGGGCATTTCTCTTaGTGGCTGCAACGCCAGTAT +
Preference number: 3 (lower is better)
Translates to: PLVGYSAMQQECLFCQGYMGHFS*WLQRQY
Trigger: ATACTGGCGTTGCAGCCACAAAGAGAAATGCCCCAT...ATATCCTTGACAGAAGAGGCATTCTTGCTGCATTGCACTATAACCTACTAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp AGGGAGTGTAGGGTTTGGGAATTCCAAAATTTACTGTGGCAGGTAACTGCTGAGGTCAAGGATATTGACTaGGTAGGTTATTGCCCAGGT +
Preference number: 3 (lower is better)
Translates to: RECRVWEFQNLLWQVTAEVKDID*VGYCPG
Trigger: ACCTGGGCAATAACCTACCAAGTCAATATCCTTGAC...CTCAGCAGTTACCTGCCACAGTAAATTTTGGAATTCCCAAACCCTACACTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp TCCAAGGGCAGATGCATGTCTAAAATCGACCTCATTTCTGGTTGTAAGGCTGTCGTCAAGGATATTGACTaGGTAGGTTATTGCCCAGGT +
Preference number: 3 (lower is better)
Translates to: SKGRCMSKIDLISGCKAVVKDID*VGYCPG
Trigger: ACCTGGGCAATAACCTACCAAGTCAATATCCTTGAC...GACAGCCTTACAACCAGAAATGAGGTCGATTTTAGACATGCATCTGCCCTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR GCA 72 bp TTGGCTTTTGAAGCTCAAGCAGCTGGTAGAGGCTCCTaGGGTGCAATTTTTCTTCTAACATGTCATCTGCTT +
Preference number: 3 (lower is better)
Translates to: LAFEAQAAGRGS*GAIFLLTCHLL
Trigger: AAGCAGATGACATGTTAGAAGAAAAATTGCACCGCAGGAGCCTCTACCAGCTGCTTGAGCTTCAAAAGCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp CCCATTCTCTATGCTAACCTTGGGATAACTTCACATCATGACAATTCCAAACTGATGGGGCATTTCTCTTaGTGGCTGCAACGCCAGTAT +
Preference number: 3 (lower is better)
Translates to: PILYANLGITSHHDNSKLMGHFS*WLQRQY
Trigger: ATACTGGCGTTGCAGCCACAAAGAGAAATGCCCCAT...CAGTTTGGAATTGTCATGATGTGAAGTTATCCCAAGGTTAGCATAGAGAATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp GATATTCTTGATGCATTTCAGGGATGCATTTCCCATCTCCTCAAAAAGAAATACAGAAGGTTCTGCTTCTaGACAACCCTGGGGCTCCGT +
Preference number: 3 (lower is better)
Translates to: DILDAFQGCISHLLKKKYRRFCF*TTLGLR
Trigger: ACGGAGCCCCAGGGTTGTCAAGAAGCAGAACCTTCT...GTATTTCTTTTTGAGGAGATGGGAAATGCATCCCTGAAATGCATCAAGAATATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp TTTCAGATAAGAGCTTGGGTCTCAACAAAAGTGGACAACATTTCCTGTTCTATCCTTTGCCACAAGGACTaGCCTTCTTCTGACCTGACC +
Preference number: 3 (lower is better)
Translates to: FQIRAWVSTKVDNISCSILCHKD*PSSDLT
Trigger: GGTCAGGTCAGAAGAAGGCAAGTCCTTGTGGCAAAG...GATAGAACAGGAAATGTTGTCCACTTTTGTTGAGACCCAAGCTCTTATCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp AAGTCTCATGAACCTAGCATAAGACAATGCAGGAAAACTGGTGGAGGTGCCTTTGTCAAGGATATTGACTaGGTAGGTTATTGCCCAGGT +
Preference number: 3 (lower is better)
Translates to: KSHEPSIRQCRKTGGGAFVKDID*VGYCPG
Trigger: ACCTGGGCAATAACCTACCAAGTCAATATCCTTGAC...AAAGGCACCTCCACCAGTTTTCCTGCATTGTCTTATGCTAGGTTCATGAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp AAGTCTCATGAACCTAGCATAAGACAATGCAGGAAAACTGGTGGAGGTGCCTTTCCTGAAGCTAGGCAATaGGAAAGAAGTCTCATGAAC +
Preference number: 3 (lower is better)
Translates to: KSHEPSIRQCRKTGGGAFPEARQ*ERSLMN
Trigger: GTTCATGAGACTTCTTTCCAATTGCCTAGCTTCAGG...AAAGGCACCTCCACCAGTTTTCCTGCATTGTCTTATGCTAGGTTCATGAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR GCA 72 bp CTACATCTGTTTGCATCCACTAGAAGACGCATAAAATaGAATCACTCACATGAGGACCAAAGCCCTCATCTC +
Preference number: 3 (lower is better)
Translates to: LHLFASTRRRIK*NHSHEDQSPHL
Trigger: GAGATGAGGGCTTTGGTCCTCATGTGAGTGATTGCATTTTATGCGTCTTCTAGTGGATGCAAACAGATGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp AGTTTTCTGAGAGTGGAACATAGCTGTAAACACAATGAGACATGCATGACCCCATTGTGGCCTACTGTCTaGGATCCTCATTTTAGTGCA +
Preference number: 3 (lower is better)
Translates to: SFLRVEHSCKHNETCMTPLWPTV*DPHFSA
Trigger: TGCACTAAAATGAGGATCCAAGACAGTAGGCCACAA...TGGGGTCATGCATGTCTCATTGTGTTTACAGCTATGTTCCACTCTCAGAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp TCAGATAAGAGCTTGGGTCTCAACAAAAGTGGACAACATTTCCTGTTCTATCCCTTGTGGCCTACTGTCTaGGATCCTCATTTTAGTGCA +
Preference number: 3 (lower is better)
Translates to: SDKSLGLNKSGQHFLFYPLWPTV*DPHFSA
Trigger: TGCACTAAAATGAGGATCCAAGACAGTAGGCCACAA...GGGATAGAACAGGAAATGTTGTCCACTTTTGTTGAGACCCAAGCTCTTATCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp AGTTTTCTGAGAGTGGAACATAGCTGTAAACACAATGAGACATGCATGACCCCAGTGCACCTTTTCTTTTaGTGGCCTACTGTCTTGGAT +
Preference number: 3 (lower is better)
Translates to: SFLRVEHSCKHNETCMTPVHLFF*WPTVLD
Trigger: ATCCAAGACAGTAGGCCACAAAAAGAAAAGGTGCAC...TGGGGTCATGCATGTCTCATTGTGTTTACAGCTATGTTCCACTCTCAGAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp ACCAGTAGCCACATAACATCTAGCAGGTACAATTTTGTGCCAGCTTGGCTTTTGCAGTACCTGATATTCTaGATGCATTTCAGGGATGCA +
Preference number: 3 (lower is better)
Translates to: TSSHITSSRYNFVPAWLLQYLIF*MHFRDA
Trigger: TGCATCCCTGAAATGCATCAAGAATATCAGGTACTG...CAAAAGCCAAGCTGGCACAAAATTGTACCTGCTAGATGTTATGTGGCTACTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR GCA 72 bp ATTGGAAAGAAGTCTCATGAACCTAGCATAAGACAATaGAGGAAAACTGGTGGAGGTGCCTTTGGATCTGAA +
Preference number: 3 (lower is better)
Translates to: IGKKSHEPSIRQ*RKTGGGAFGSE
Trigger: TTCAGATCCAAAGGCACCTCCACCAGTTTTCCTGCATTGTCTTATGCTAGGTTCATGAGACTTCTTTCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR-3UTR CAA 90 bp TTTCAGATAAGAGCTTGGGTCTCAACAAAAGTGGACAACATTTCCTGTTCTATCGTGCACCTTTTCTTTTaGTGGCCTACTGTCTTGGAT +
Preference number: 3 (lower is better)
Translates to: FQIRAWVSTKVDNISCSIVHLFF*WPTVLD
Trigger: ATCCAAGACAGTAGGCCACAAAAAGAAAAGGTGCAC...GATAGAACAGGAAATGTTGTCCACTTTTGTTGAGACCCAAGCTCTTATCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp CTGCTGAGTCTGGAGGTGGGGGCCTGCCTGCACACTGTCCTAGGTGGGCCAGTTGCCGTTGGGCCCAGGTaGCCCTGCCTTCTTTCCATC +
Preference number: 4 (lower is better)
Translates to: LLSLEVGACLHTVLGGPVAVGPR*PCLLSI
Trigger: GATGGAAAGAAGGCAGGGCCACCTGGGCCCAACGGC...AACTGGCCCACCTAGGACAGTGTGCAGGCAGGCCCCCACCTCCAGACTCAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp CTGCTGAGTCTGGAGGTGGGGGCCTGCCTGCACACTGTCCTAGGTGGGCCAGTTGCCGTTGGGCCCAGGTaGCCCTGCCTTCTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: LLSLEVGACLHTVLGGPVAVGPR*PCLLSL
Trigger: AAGGGAAAGAAGGCAGGGCCACCTGGGCCCAACGGC...AACTGGCCCACCTAGGACAGTGTGCAGGCAGGCCCCCACCTCCAGACTCAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
CDS-3UTR GCA 90 bp ATTCCACACACAGCAGCACTTAGAGGTTCTGGGAGTCCTGGCTCCCAAACCTGGAGCCGCAGCCCTGGCTaGCCCGCTCCCTTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: IPHTAALRGSGSPGSQTWSRSPG*PAPLAL
Trigger: CAGCGCCAAGGGAGCGGGGCAGCCAGGGCTGCGGCT...CCAGGTTTGGGAGCCAGGACTCCCAGAACCTCTAAGTGCTGCTGTGTGTGGAAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp GTCAGCAGGGAGCCTAAGAAGGTTCTGCTTCTTGACAACCCTGGGGCTCCGTCAGACGGCTGCCCCAGGTaGCGGGTGATGGGACCCACC +
Preference number: 4 (lower is better)
Translates to: VSREPKKVLLLDNPGAPSDGCPR*RVMGPT
Trigger: GGTGGGTCCCATCACCCGCCACCTGGGGCAGCCGTC...TGACGGAGCCCCAGGGTTGTCAAGAAGCAGAACCTTCTTAGGCTCCCTGCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp GGGGCTTCGCCCAGCCTGATGGCCCCGAAGAAGGTGGTGTGCTTGCTCATATTGCCACTGGCAGACCTGTaGGGAATGGGCCCAGGACAG +
Preference number: 4 (lower is better)
Translates to: GASPSLMAPKKVVCLLILPLADL*GMGPGQ
Trigger: CTGTCCTGGGCCCATTCCCCACAGGTCTGCCAGTGG...CAATATGAGCAAGCACACCACCTTCTTCGGGGCCATCAGGCTGGGCGAAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
CDS-3UTR GCA 90 bp GCATGGGGCATTTCTCTTTGTGGCTGCAACGCCAGTATACCTCATTCCACACACAGCCGCAGCCCTGGCTaGCCCGCTCCCTTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: AWGISLCGCNASIPHSTHSRSPG*PAPLAL
Trigger: CAGCGCCAAGGGAGCGGGGCAGCCAGGGCTGCGGCT...GTGTGTGGAATGAGGTATACTGGCGTTGCAGCCACAAAGAGAAATGCCCCATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp GTCAGCAGGGAGCCTAAGAAGGTTCTGCTTCTTGACAACCCTGGGGCTCCGTCACGAGGCTCCCAGGGCTaGTTAGGGTGCCAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: VSREPKKVLLLDNPGAPSRGSQG*LGCQRC
Trigger: GCACCTCTGGCACCCTAAGCAGCCCTGGGAGCCTCG...TGACGGAGCCCCAGGGTTGTCAAGAAGCAGAACCTTCTTAGGCTCCCTGCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp GCTCTGGAGTCCAGCAAGCTGCCACAGTATACCTCTCAGCCTGAGTGGGAAGTTTTAGGGTGCCAGAGGTaGCAGGAGCACCCGGGCCAC +
Preference number: 4 (lower is better)
Translates to: ALESSKLPQYTSQPEWEVLGCQR*QEHPGH
Trigger: GTGGCCCGGGTGCTCCTGGCACCTCTGGCACCCTAA...AACTTCCCACTCAGGCTGAGAGGTATACTGTGGCAGCTTGCTGGACTCCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp AGCCTAAGAAGGTTCTGCTTCTTGACAACCCTGGGGCTCCGTCAACTGTCCTGGTTAGGGTGCCAGAGGTaGCAGGAGCACCCGGGCCAC +
Preference number: 4 (lower is better)
Translates to: SLRRFCFLTTLGLRQLSWLGCQR*QEHPGH
Trigger: GTGGCCCGGGTGCTCCTGGCACCTCTGGCACCCTAA...CCAGGACAGTTGACGGAGCCCCAGGGTTGTCAAGAAGCAGAACCTTCTTAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp GTCAGCAGGGAGCCTAAGAAGGTTCTGCTTCTTGACAACCCTGGGGCTCCGTCAGCCGTTGGGCCCAGGTaGCCCTGCCTTCTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: VSREPKKVLLLDNPGAPSAVGPR*PCLLSL
Trigger: AAGGGAAAGAAGGCAGGGCCACCTGGGCCCAACGGC...TGACGGAGCCCCAGGGTTGTCAAGAAGCAGAACCTTCTTAGGCTCCCTGCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
CDS-3UTR GCA 90 bp ATTCCACACACAGCAGCACTTAGAGGTTCTGGGAGTCCTGGCTCCCAAACCTGGGCTGACCCTTGGCCCTaGAGATGCACCACAGCTGGC +
Preference number: 4 (lower is better)
Translates to: IPHTAALRGSGSPGSQTWADPWP*RCTTAG
Trigger: GCCAGCTGTGGTGCATCTGCAGGGCCAAGGGTCAGC...CCAGGTTTGGGAGCCAGGACTCCCAGAACCTCTAAGTGCTGCTGTGTGTGGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp GTTCTTGCTACCACTGCTGATTGTTCAAGGCCTCCAAGGGCAGATGCATGTCTAGACGGCTGCCCCAGGTaGCGGGTGATGGGACCCACC +
Preference number: 4 (lower is better)
Translates to: VLATTADCSRPPRADACLDGCPR*RVMGPT
Trigger: GGTGGGTCCCATCACCCGCCACCTGGGGCAGCCGTC...TAGACATGCATCTGCCCTTGGAGGCCTTGAACAATCAGCAGTGGTAGCAAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp GGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCATGACGGCTGCCCCAGGTaGCGGGTGATGGGACCCACC +
Preference number: 4 (lower is better)
Translates to: GMSCRGTVRKLPLFLHSHDGCPR*RVMGPT
Trigger: GGTGGGTCCCATCACCCGCCACCTGGGGCAGCCGTC...ATGGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp GGTGCACAAATATCTTGGGGGACTATGTGTGGGGAGGCAAGTTGTGATGGAGATAGGTCCTGGAGGTCCTaGGGGGCCGTTGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GAQISWGTMCGEASCDGDRSWRS*GAVGPR
Trigger: CCTGGGCCCAACGGCCCCCCAGGACCTCCAGGACCT...ATCTCCATCACAACTTGCCTCCCCACACATAGTCCCCCAAGATATTTGTGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp TTGGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCAGGTCCTGGAGGTCCTaGGGGGCCGTTGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LACPAGAQLGNFLYFSIARSWRS*GAVGPR
Trigger: CCTGGGCCCAACGGCCCCCCAGGACCTCCAGGACCT...GGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp ATTCCACACACAGCAGCACTTAGAGGTTCTGGGAGTCCTGGCTCCCAAACCTGGTCCAAAGGCTGCTGTTaGAAGGACGGCTGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: IPHTAALRGSGSPGSQTWSKGCC*KDGCPR
Trigger: CCTGGGGCAGCCGTCCTTTCAACAGCAGCCTTTGGA...CCAGGTTTGGGAGCCAGGACTCCCAGAACCTCTAAGTGCTGCTGTGTGTGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp GCTCTGGAGTCCAGCAAGCTGCCACAGTATACCTCTCAGCCTGAGTGGGAAGTTTTTTCTGCCTGGCCTTaGGGAGGCACACGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: ALESSKLPQYTSQPEWEVFSAWP*GGTRLQ
Trigger: CTGCAGGCGTGTGCCTCCTCAAGGCCAGGCAGAAAA...AACTTCCCACTCAGGCTGAGAGGTATACTGTGGCAGCTTGCTGGACTCCAGAGC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp TCCAAGGGCAGATGCATGTCTAAAATCGACCTCATTTCTGGTTGTAAGGCTGTCAGCCGCAGCCCTGGCTaGCCCGCTCCCTTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: SKGRCMSKIDLISGCKAVSRSPG*PAPLAL
Trigger: CAGCGCCAAGGGAGCGGGGCAGCCAGGGCTGCGGCT...GACAGCCTTACAACCAGAAATGAGGTCGATTTTAGACATGCATCTGCCCTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp GCACAAATATCTTGGGGGACTATGTGTGGGGAGGCAAGTTGTGATGGAGATTGTGACGGCTGCCCCAGGTaGCGGGTGATGGGACCCACC +
Preference number: 4 (lower is better)
Translates to: AQISWGTMCGEASCDGDCDGCPR*RVMGPT
Trigger: GGTGGGTCCCATCACCCGCCACCTGGGGCAGCCGTC...ACAATCTCCATCACAACTTGCCTCCCCACACATAGTCCCCCAAGATATTTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp ATTCTCGGGAGGGCAACCTCTCAACATCAACAGAGGAAGATGTTCTGGCAACATAGGTCCTGGAGGTCCTaGGGGGCCGTTGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: ILGRATSQHQQRKMFWQHRSWRS*GAVGPR
Trigger: CCTGGGCCCAACGGCCCCCCAGGACCTCCAGGACCT...ATGTTGCCAGAACATCTTCCTCTGTTGATGTTGAGAGGTTGCCCTCCCGAGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp GCACAAATATCTTGGGGGACTATGTGTGGGGAGGCAAGTTGTGATGGAGATTGTAGGTCCTGGAGGTCCTaGGGGGCCGTTGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: AQISWGTMCGEASCDGDCRSWRS*GAVGPR
Trigger: CCTGGGCCCAACGGCCCCCCAGGACCTCCAGGACCT...ACAATCTCCATCACAACTTGCCTCCCCACACATAGTCCCCCAAGATATTTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp GGGGCTTCGCCCAGCCTGATGGCCCCGAAGAAGGTGGTGTGCTTGCTCATATTGAGGTCTGACTATAGATaGAGTAGGTGCCGTCCACCA +
Preference number: 4 (lower is better)
Translates to: GASPSLMAPKKVVCLLILRSDYR*SRCRPP
Trigger: TGGTGGACGGCACCTACTTCATCTATAGTCAGACCT...CAATATGAGCAAGCACACCACCTTCTTCGGGGCCATCAGGCTGGGCGAAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
CDS-3UTR GCA 90 bp CCAGAACTAGTAGCTAGGGTCAGGAATGGAAGACAGAAGACCTTGCCCCACATATTAGGGTGCCAGAGGTaGCAGGAGCACCCGGGCCAC +
Preference number: 4 (lower is better)
Translates to: PELVARVRNGRQKTLPHILGCQR*QEHPGH
Trigger: GTGGCCCGGGTGCTCCTGGCACCTCTGGCACCCTAA...TATGTGGGGCAAGGTCTTCTGTCTTCCATTCCTGACCCTAGCTACTAGTTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp CCAGAACTAGTAGCTAGGGTCAGGAATGGAAGACAGAAGACCTTGCCCCACATACGAGGCTCCCAGGGCTaGTTAGGGTGCCAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: PELVARVRNGRQKTLPHIRGSQG*LGCQRC
Trigger: GCACCTCTGGCACCCTAAGCAGCCCTGGGAGCCTCG...TATGTGGGGCAAGGTCTTCTGTCTTCCATTCCTGACCCTAGCTACTAGTTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp AGCTTGGCTTTTGAAGCTCAAGCAGCTGGTAGAGGCTCCTGCGGTGCAATTTTTCGAGGCTCCCAGGGCTaGTTAGGGTGCCAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: SLAFEAQAAGRGSCGAIFRGSQG*LGCQRC
Trigger: GCACCTCTGGCACCCTAAGCAGCCCTGGGAGCCTCG...AAAAATTGCACCGCAGGAGCCTCTACCAGCTGCTTGAGCTTCAAAAGCCAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp CATATGATGGGGTTGGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATCGAGGCTCCCAGGGCTaGTTAGGGTGCCAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: HMMGLACPAGAQLGNFLYRGSQG*LGCQRC
Trigger: GCACCTCTGGCACCCTAAGCAGCCCTGGGAGCCTCG...ATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCCAACCCCATCATATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp GCATGGGGCATTTCTCTTTGTGGCTGCAACGCCAGTATACCTCATTCCACACACGCTGACCCTTGGCCCTaGAGATGCACCACAGCTGGC +
Preference number: 4 (lower is better)
Translates to: AWGISLCGCNASIPHSTHADPWP*RCTTAG
Trigger: GCCAGCTGTGGTGCATCTGCAGGGCCAAGGGTCAGC...GTGTGTGGAATGAGGTATACTGGCGTTGCAGCCACAAAGAGAAATGCCCCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp CCTGTGGCAGCCAAGAGACTAGGCAGTACCATAGCATTGCTAGGTTTCTCCCTAGCTGACCCTTGGCCCTaGAGATGCACCACAGCTGGC +
Preference number: 4 (lower is better)
Translates to: PVAAKRLGSTIALLGFSLADPWP*RCTTAG
Trigger: GCCAGCTGTGGTGCATCTGCAGGGCCAAGGGTCAGC...TAGGGAGAAACCTAGCAATGCTATGGTACTGCCTAGTCTCTTGGCTGCCACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp ATAAGACAATGCAGGAAAACTGGTGGAGGTGCCTTTGGATCTGAAGTAGGTGTGAGGTCCTGGAGGTCCTaGGGGGCCGTTGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: IRQCRKTGGGAFGSEVGVRSWRS*GAVGPR
Trigger: CCTGGGCCCAACGGCCCCCCAGGACCTCCAGGACCT...CACACCTACTTCAGATCCAAAGGCACCTCCACCAGTTTTCCTGCATTGTCTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp TATTGCCCAGGTCTTTGCCACAAGGACTTGCCTTCTTCTGACCTGACCCTCTCCAATTCCTGGAATCCCTaGAGGTCCCTGGGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: YCPGLCHKDLPSSDLTLSNSWNP*RSLGSR
Trigger: CCGGGACCCCAGGGACCTCCAGGGATTCCAGGAATT...GGAGAGGGTCAGGTCAGAAGAAGGCAAGTCCTTGTGGCAAAGACCTGGGCAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp CTGCTGAGTCTGGAGGTGGGGGCCTGCCTGCACACTGTCCTAGGTGGGCCAGTTCATAACAGTTGTTCCTaGAATCCCAGGAATTCCTGG +
Preference number: 4 (lower is better)
Translates to: LLSLEVGACLHTVLGGPVHNSCS*NPRNSW
Trigger: CCAGGAATTCCTGGGATTCCAGGAACAACTGTTATG...AACTGGCCCACCTAGGACAGTGTGCAGGCAGGCCCCCACCTCCAGACTCAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp ATTCCACACACAGCAGCACTTAGAGGTTCTGGGAGTCCTGGCTCCCAAACCTGGGCCAGGTGGGCCAGGTaGTCCCATAACAGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: IPHTAALRGSGSPGSQTWARWAR*SHNSCS
Trigger: GGAACAACTGTTATGGGACCACCTGGCCCACCTGGC...CCAGGTTTGGGAGCCAGGACTCCCAGAACCTCTAAGTGCTGCTGTGTGTGGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp TCAGATAAGAGCTTGGGTCTCAACAAAAGTGGACAACATTTCCTGTTCTATCCCAGCCGCAGCCCTGGCTaGCCCGCTCCCTTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: SDKSLGLNKSGQHFLFYPSRSPG*PAPLAL
Trigger: CAGCGCCAAGGGAGCGGGGCAGCCAGGGCTGCGGCT...GGGATAGAACAGGAAATGTTGTCCACTTTTGTTGAGACCCAAGCTCTTATCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp GTAACAGGATGGGATGTAGGTTGGGCTGCATTCCCTCTAAAAGCCTTTCTAGGTTTAGGGTGCCAGAGGTaGCAGGAGCACCCGGGCCAC +
Preference number: 4 (lower is better)
Translates to: VTGWDVGWAAFPLKAFLGLGCQR*QEHPGH
Trigger: GTGGCCCGGGTGCTCCTGGCACCTCTGGCACCCTAA...ACCTAGAAAGGCTTTTAGAGGGAATGCAGCCCAACCTACATCCCATCCTGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp ATTCTCGGGAGGGCAACCTCTCAACATCAACAGAGGAAGATGTTCTGGCAACATCGAGGCTCCCAGGGCTaGTTAGGGTGCCAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: ILGRATSQHQQRKMFWQHRGSQG*LGCQRC
Trigger: GCACCTCTGGCACCCTAAGCAGCCCTGGGAGCCTCG...ATGTTGCCAGAACATCTTCCTCTGTTGATGTTGAGAGGTTGCCCTCCCGAGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp GCTACCACTGCTGATTGTTCAAGGCCTCCAAGGGCAGATGCATGTCTAAAATCGGCTGACCCTTGGCCCTaGAGATGCACCACAGCTGGC +
Preference number: 4 (lower is better)
Translates to: ATTADCSRPPRADACLKSADPWP*RCTTAG
Trigger: GCCAGCTGTGGTGCATCTGCAGGGCCAAGGGTCAGC...CGATTTTAGACATGCATCTGCCCTTGGAGGCCTTGAACAATCAGCAGTGGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp TGCCACCGATCTTCAAACTCTAAGGGGCTTTTGGAGGTTATCCAGTTTAACCATGACGGCTGCCCCAGGTaGCGGGTGATGGGACCCACC +
Preference number: 4 (lower is better)
Translates to: CHRSSNSKGLLEVIQFNHDGCPR*RVMGPT
Trigger: GGTGGGTCCCATCACCCGCCACCTGGGGCAGCCGTC...ATGGTTAAACTGGATAACCTCCAAAAGCCCCTTAGAGTTTGAAGATCGGTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp AAGTCTCATGAACCTAGCATAAGACAATGCAGGAAAACTGGTGGAGGTGCCTTTAGGTCCTGGAGGTCCTaGGGGGCCGTTGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: KSHEPSIRQCRKTGGGAFRSWRS*GAVGPR
Trigger: CCTGGGCCCAACGGCCCCCCAGGACCTCCAGGACCT...AAAGGCACCTCCACCAGTTTTCCTGCATTGTCTTATGCTAGGTTCATGAGACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp CAAATCAGGTTCTGTAGTAGGCATGGCCCAGGGAAAGCCCAGGCAAGGGTGGGAAATCCCAGGAATTCCTaGAATCCCTGGAGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: QIRFCSRHGPGKAQARVGNPRNS*NPWRSL
Trigger: CAGGGACCTCCAGGGATTCCAGGAATTCCTGGGATT...TCCCACCCTTGCCTGGGCTTTCCCTGGGCCATGCCTACTACAGAACCTGATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp GGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCATCCACTGGCAGACCTGTaGGGAATGGGCCCAGGACAG +
Preference number: 4 (lower is better)
Translates to: GMSCRGTVRKLPLFLHSHPLADL*GMGPGQ
Trigger: CTGTCCTGGGCCCATTCCCCACAGGTCTGCCAGTGG...ATGGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
CDS-3UTR TCA 90 bp CATATGATGGGGTTGGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATTCCAAAGGCTGCTGTTaGAAGGACGGCTGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: HMMGLACPAGAQLGNFLYSKGCC*KDGCPR
Trigger: CCTGGGGCAGCCGTCCTTTCAACAGCAGCCTTTGGA...ATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCCAACCCCATCATATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp GGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCATTCCAAAGGCTGCTGTTaGAAGGACGGCTGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GMSCRGTVRKLPLFLHSHSKGCC*KDGCPR
Trigger: CCTGGGGCAGCCGTCCTTTCAACAGCAGCCTTTGGA...ATGGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp CTGCTGAGTCTGGAGGTGGGGGCCTGCCTGCACACTGTCCTAGGTGGGCCAGTTATTGAGCACTCCACCTaGAAGATCATTTTTGACTTG +
Preference number: 4 (lower is better)
Translates to: LLSLEVGACLHTVLGGPVIEHST*KIIFDL
Trigger: CAAGTCAAAAATGATCTTTCAGGTGGAGTGCTCAAT...AACTGGCCCACCTAGGACAGTGTGCAGGCAGGCCCCCACCTCCAGACTCAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp CAAATCAGGTTCTGTAGTAGGCATGGCCCAGGGAAAGCCCAGGCAAGGGTGGGATGCGAGACCAGTCATTaGGCACTCCACCTGAAAGAT +
Preference number: 4 (lower is better)
Translates to: QIRFCSRHGPGKAQARVGCETSH*ALHLKD
Trigger: ATCTTTCAGGTGGAGTGCTCAATGACTGGTCTCGCA...TCCCACCCTTGCCTGGGCTTTCCCTGGGCCATGCCTACTACAGAACCTGATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp GGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCATTTTTCTGCCTGGCCTTaGGGAGGCACACGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: GMSCRGTVRKLPLFLHSHFSAWP*GGTRLQ
Trigger: CTGCAGGCGTGTGCCTCCTCAAGGCCAGGCAGAAAA...ATGGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp CAAATCAGGTTCTGTAGTAGGCATGGCCCAGGGAAAGCCCAGGCAAGGGTGGGAAATGAGGGATGGAAATaGATGGCCACTGGCAGACCT +
Preference number: 4 (lower is better)
Translates to: QIRFCSRHGPGKAQARVGNEGWK*MATGRP
Trigger: AGGTCTGCCAGTGGCCATTCATTTCCATCCCTCATT...TCCCACCCTTGCCTGGGCTTTCCCTGGGCCATGCCTACTACAGAACCTGATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
CDS-3UTR GCA 90 bp CTTGGGTCTCAACAAAAGTGGACAACATTTCCTGTTCTATCCCCACTTTCTCCCTTAGGGTGCCAGAGGTaGCAGGAGCACCCGGGCCAC +
Preference number: 4 (lower is better)
Translates to: LGSQQKWTTFPVLSPLSPLGCQR*QEHPGH
Trigger: GTGGCCCGGGTGCTCCTGGCACCTCTGGCACCCTAA...GGGAGAAAGTGGGGATAGAACAGGAAATGTTGTCCACTTTTGTTGAGACCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp GCATGGGGCATTTCTCTTTGTGGCTGCAACGCCAGTATACCTCATTCCACACACTCCCTGTCTCAATGCTaGGGGTGCACTGCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: AWGISLCGCNASIPHSTHSLSQC*GCTAGR
Trigger: CCTTCCTGCAGTGCACCCGCAGCATTGAGACAGGGA...GTGTGTGGAATGAGGTATACTGGCGTTGCAGCCACAAAGAGAAATGCCCCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp TCAGATAAGAGCTTGGGTCTCAACAAAAGTGGACAACATTTCCTGTTCTATCCCAGGTCCTGGAGGTCCTaGGGGGCCGTTGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SDKSLGLNKSGQHFLFYPRSWRS*GAVGPR
Trigger: CCTGGGCCCAACGGCCCCCCAGGACCTCCAGGACCT...GGGATAGAACAGGAAATGTTGTCCACTTTTGTTGAGACCCAAGCTCTTATCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp CCAGAACTAGTAGCTAGGGTCAGGAATGGAAGACAGAAGACCTTGCCCCACATAAATTCCTGGAATCCCTaGAGGTCCCTGGGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: PELVARVRNGRQKTLPHINSWNP*RSLGSR
Trigger: CCGGGACCCCAGGGACCTCCAGGGATTCCAGGAATT...TATGTGGGGCAAGGTCTTCTGTCTTCCATTCCTGACCCTAGCTACTAGTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp GCTACCACTGCTGATTGTTCAAGGCCTCCAAGGGCAGATGCATGTCTAAAATCGAATTCCTGGAATCCCTaGAGGTCCCTGGGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: ATTADCSRPPRADACLKSNSWNP*RSLGSR
Trigger: CCGGGACCCCAGGGACCTCCAGGGATTCCAGGAATT...CGATTTTAGACATGCATCTGCCCTTGGAGGCCTTGAACAATCAGCAGTGGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp TTGGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCAATTCCTGGAATCCCTaGAGGTCCCTGGGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: LACPAGAQLGNFLYFSIANSWNP*RSLGSR
Trigger: CCGGGACCCCAGGGACCTCCAGGGATTCCAGGAATT...GGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp TTGTGGCTGCAACGCCAGTATACCTCATTCCACACACAGCAGCACTTAGAGGTTAATTCCTGGAATCCCTaGAGGTCCCTGGGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: LWLQRQYTSFHTQQHLEVNSWNP*RSLGSR
Trigger: CCGGGACCCCAGGGACCTCCAGGGATTCCAGGAATT...AACCTCTAAGTGCTGCTGTGTGTGGAATGAGGTATACTGGCGTTGCAGCCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp AGCCTAAGAAGGTTCTGCTTCTTGACAACCCTGGGGCTCCGTCAACTGTCCTGGAATCCCAGGAATTCCTaGAATCCCTGGAGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: SLRRFCFLTTLGLRQLSWNPRNS*NPWRSL
Trigger: CAGGGACCTCCAGGGATTCCAGGAATTCCTGGGATT...CCAGGACAGTTGACGGAGCCCCAGGGTTGTCAAGAAGCAGAACCTTCTTAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp GGAAGATGTTCTGGCAACATTAAGGCCTTTGTAATATGGCAGGAGGAGAGGAGGGCCGTTGGGCCCAGGTaGCCCTGCCTTCTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: GRCSGNIKAFVIWQEERRAVGPR*PCLLSL
Trigger: AAGGGAAAGAAGGCAGGGCCACCTGGGCCCAACGGC...CCTCCTCTCCTCCTGCCATATTACAAAGGCCTTAATGTTGCCAGAACATCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
3UTR CAA 72 bp TACATTTCAGGAGCAAGAGGAACCGGCTGGACCAGGTaGATCCTTCCAGCTTTAGGCTGTGCCTGGTACCCT +
Preference number: 4 (lower is better)
Translates to: YISGARGTGWTR*ILPALGCAWYP
Trigger: AGGGTACCAGGCACAGCCTAAAGCTGGAAGGATCAACCTGGTCCAGCCGGTTCCTCTTGCTCCTGAAATGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp GTAACAGGATGGGATGTAGGTTGGGCTGCATTCCCTCTAAAAGCCTTTCTAGGTTTTTCTGCCTGGCCTTaGGGAGGCACACGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: VTGWDVGWAAFPLKAFLGFSAWP*GGTRLQ
Trigger: CTGCAGGCGTGTGCCTCCTCAAGGCCAGGCAGAAAA...ACCTAGAAAGGCTTTTAGAGGGAATGCAGCCCAACCTACATCCCATCCTGTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp ACCAGTAGCCACATAACATCTAGCAGGTACAATTTTGTGCCAGCTTGGCTTTTGTTAGGGTGCCAGAGGTaGCAGGAGCACCCGGGCCAC +
Preference number: 4 (lower is better)
Translates to: TSSHITSSRYNFVPAWLLLGCQR*QEHPGH
Trigger: GTGGCCCGGGTGCTCCTGGCACCTCTGGCACCCTAA...CAAAAGCCAAGCTGGCACAAAATTGTACCTGCTAGATGTTATGTGGCTACTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp TTCTGTAGTAGGCATGGCCCAGGGAAAGCCCAGGCAAGGGTGGGACCTCAGGCATTTTGCTTCTCTTATTaGGGCGAACACGCCTACTTT +
Preference number: 4 (lower is better)
Translates to: FCSRHGPGKAQARVGPQAFCFSY*GEHAYF
Trigger: AAAGTAGGCGTGTTCGCCGCAATAAGAGAAGCAAAA...TGCCTGAGGTCCCACCCTTGCCTGGGCTTTCCCTGGGCCATGCCTACTACAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp ACCTTGCCCCACATAGCAGCTCGTTGTGTGATGGTTGCTGCTTTTATCAGATGGTCCCTGTCTCAATGCTaGGGGTGCACTGCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: TLPHIAARCVMVAAFIRWSLSQC*GCTAGR
Trigger: CCTTCCTGCAGTGCACCCGCAGCATTGAGACAGGGA...CCATCTGATAAAAGCAGCAACCATCACACAACGAGCTGCTATGTGGGGCAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp TTGGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCGCCAGGTGGGCCAGGTaGTCCCATAACAGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: LACPAGAQLGNFLYFSIAARWAR*SHNSCS
Trigger: GGAACAACTGTTATGGGACCACCTGGCCCACCTGGC...GGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp GAACCTAGCATAAGACAATGCAGGAAAACTGGTGGAGGTGCCTTTGGATCTGAAGCCGTTGGGCCCAGGTaGCCCTGCCTTCTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: EPSIRQCRKTGGGAFGSEAVGPR*PCLLSL
Trigger: AAGGGAAAGAAGGCAGGGCCACCTGGGCCCAACGGC...TTCAGATCCAAAGGCACCTCCACCAGTTTTCCTGCATTGTCTTATGCTAGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
CDS-3UTR CCA 90 bp ATAAGACAATGCAGGAAAACTGGTGGAGGTGCCTTTGGATCTGAAGTAGGTGTGGCCGTTGGGCCCAGGTaGCCCTGCCTTCTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: IRQCRKTGGGAFGSEVGVAVGPR*PCLLSL
Trigger: AAGGGAAAGAAGGCAGGGCCACCTGGGCCCAACGGC...CACACCTACTTCAGATCCAAAGGCACCTCCACCAGTTTTCCTGCATTGTCTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
CDS-3UTR TCA 90 bp TCCAAGGGCAGATGCATGTCTAAAATCGACCTCATTTCTGGTTGTAAGGCTGTCTCCAAAGGCTGCTGTTaGAAGGACGGCTGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: SKGRCMSKIDLISGCKAVSKGCC*KDGCPR
Trigger: CCTGGGGCAGCCGTCCTTTCAACAGCAGCCTTTGGA...GACAGCCTTACAACCAGAAATGAGGTCGATTTTAGACATGCATCTGCCCTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp TATTGCCCAGGTCTTTGCCACAAGGACTTGCCTTCTTCTGACCTGACCCTCTCCTTTGACTTGAATTGCTaGCCCTTGGCCCTGCAGATG +
Preference number: 4 (lower is better)
Translates to: YCPGLCHKDLPSSDLTLSFDLNC*PLALQM
Trigger: CATCTGCAGGGCCAAGGGTCAGCAATTCAAGTCAAA...GGAGAGGGTCAGGTCAGAAGAAGGCAAGTCCTTGTGGCAAAGACCTGGGCAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp GCTCCGTCAACTGTCCTGGCAACTCAAGGTCTTTCTGGGAAGTCACATAGGCCTTGCGAGACCAGTCATTaGGCACTCCACCTGAAAGAT +
Preference number: 4 (lower is better)
Translates to: APSTVLATQGLSGKSHRPCETSH*ALHLKD
Trigger: ATCTTTCAGGTGGAGTGCTCAATGACTGGTCTCGCA...AGGCCTATGTGACTTCCCAGAAAGACCTTGAGTTGCCAGGACAGTTGACGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp TCCAAGGGCAGATGCATGTCTAAAATCGACCTCATTTCTGGTTGTAAGGCTGTCTTTTCTGCCTGGCCTTaGGGAGGCACACGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SKGRCMSKIDLISGCKAVFSAWP*GGTRLQ
Trigger: CTGCAGGCGTGTGCCTCCTCAAGGCCAGGCAGAAAA...GACAGCCTTACAACCAGAAATGAGGTCGATTTTAGACATGCATCTGCCCTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp TATTGCCCAGGTCTTTGCCACAAGGACTTGCCTTCTTCTGACCTGACCCTCTCCAATGAGGGATGGAAATaGATGGCCACTGGCAGACCT +
Preference number: 4 (lower is better)
Translates to: YCPGLCHKDLPSSDLTLSNEGWK*MATGRP
Trigger: AGGTCTGCCAGTGGCCATTCATTTCCATCCCTCATT...GGAGAGGGTCAGGTCAGAAGAAGGCAAGTCCTTGTGGCAAAGACCTGGGCAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
CDS-3UTR TCA 90 bp GCTCCGTCAACTGTCCTGGCAACTCAAGGTCTTTCTGGGAAGTCACATAGGCCTCCACCATTTTTGACTTaGATTGCTGACCCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: APSTVLATQGLSGKSHRPPPFLT*IADPWP
Trigger: GGGCCAAGGGTCAGCAATTCAAGTCAAAAATGGTGG...AGGCCTATGTGACTTCCCAGAAAGACCTTGAGTTGCCAGGACAGTTGACGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113778.8
ENSMUST00000113781.8
CDS-3UTR TCA 90 bp CCCACTTTCTCCCCCTCCCTGGGAAAGGTAGAAAAGCTATACTGTGCTGATGCCAGACCTGACTATAGATaGAGTAGGTGCCGTCCACCA +
Preference number: 4 (lower is better)
Translates to: PTFSPSLGKVEKLYCADARPDYR*SRCRPP
Trigger: TGGTGGACGGCACCTACTTCATCTATAGTCAGGTCT...GGCATCAGCACAGTATAGCTTTTCTACCTTTCCCAGGGAGGGGGAGAAAGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113778.8
ENSMUST00000113781.8
CDS-3UTR GCA 90 bp GATATTCTTGATGCATTTCAGGGATGCATTTCCCATCTCCTCAAAAAGAAATACAGCCGCAGCCCTGGCTaGCCCGCTCCCTTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: DILDAFQGCISHLLKKKYSRSPG*PAPLAL
Trigger: CAGCGCCAAGGGAGCGGGGCAGCCAGGGCTGCGGCT...GTATTTCTTTTTGAGGAGATGGGAAATGCATCCCTGAAATGCATCAAGAATATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp CCTCTAGTAGGTTATAGTGCAATGCAGCAAGAATGCCTCTTCTGTCAAGGATATCGAGGCTCCCAGGGCTaGTTAGGGTGCCAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: PLVGYSAMQQECLFCQGYRGSQG*LGCQRC
Trigger: GCACCTCTGGCACCCTAAGCAGCCCTGGGAGCCTCG...ATATCCTTGACAGAAGAGGCATTCTTGCTGCATTGCACTATAACCTACTAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp AAGTCTCATGAACCTAGCATAAGACAATGCAGGAAAACTGGTGGAGGTGCCTTTGCTGACCCTTGGCCCTaGAGATGCACCACAGCTGGC +
Preference number: 4 (lower is better)
Translates to: KSHEPSIRQCRKTGGGAFADPWP*RCTTAG
Trigger: GCCAGCTGTGGTGCATCTGCAGGGCCAAGGGTCAGC...AAAGGCACCTCCACCAGTTTTCCTGCATTGTCTTATGCTAGGTTCATGAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp ACAGAAGACCTTGCCCCACATAGCAGCTCGTTGTGTGATGGTTGCTGCTTTTATATGCTGCGGGTGCACTaGAGGAAGGGCTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: TEDLAPHSSSLCDGCCFYMLRVH*RKGFSS
Trigger: GGATGAGAAGCCCTTCCTGCAGTGCACCCGCAGCAT...ATAAAAGCAGCAACCATCACACAACGAGCTGCTATGTGGGGCAAGGTCTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp GTAGAAAAGCTATACTGTGCTGATGCCCAAGGGAGTGTAGGGTTTGGGAATTCCATGCTGCGGGTGCACTaGAGGAAGGGCTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: VEKLYCADAQGSVGFGNSMLRVH*RKGFSS
Trigger: GGATGAGAAGCCCTTCCTGCAGTGCACCCGCAGCAT...GGAATTCCCAAACCCTACACTCCCTTGGGCATCAGCACAGTATAGCTTTTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp GGAAGATGTTCTGGCAACATTAAGGCCTTTGTAATATGGCAGGAGGAGAGGAGGATGCTGCGGGTGCACTaGAGGAAGGGCTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: GRCSGNIKAFVIWQEERRMLRVH*RKGFSS
Trigger: GGATGAGAAGCCCTTCCTGCAGTGCACCCGCAGCAT...CCTCCTCTCCTCCTGCCATATTACAAAGGCCTTAATGTTGCCAGAACATCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp GGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCATTCTCAATGCTGCGGGTaGACTGCAGGAAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: GMSCRGTVRKLPLFLHSHSQCCG*TAGRAS
Trigger: AGAAGCCCTTCCTGCAGTGCACCCGCAGCATTGAGA...ATGGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp GCACAAATATCTTGGGGGACTATGTGTGGGGAGGCAAGTTGTGATGGAGATTGTTCCCTGTCTCAATGCTaGGGGTGCACTGCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: AQISWGTMCGEASCDGDCSLSQC*GCTAGR
Trigger: CCTTCCTGCAGTGCACCCGCAGCATTGAGACAGGGA...ACAATCTCCATCACAACTTGCCTCCCCACACATAGTCCCCCAAGATATTTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp CCCACTTTCTCCCCCTCCCTGGGAAAGGTAGAAAAGCTATACTGTGCTGATGCCGAGGAGGCACACGCCTaGAGTATAGCAAGTGTTGTA +
Preference number: 4 (lower is better)
Translates to: PTFSPSLGKVEKLYCADAEEAHA*SIASVV
Trigger: TACAACACTTGCTATACTGCAGGCGTGTGCCTCCTC...GGCATCAGCACAGTATAGCTTTTCTACCTTTCCCAGGGAGGGGGAGAAAGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp GTTCTTGCTACCACTGCTGATTGTTCAAGGCCTCCAAGGGCAGATGCATGTCTATTCACGGCGATTTTCTaGCTGGCCTTGAGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: VLATTADCSRPPRADACLFTAIF*LALRRH
Trigger: GTGCCTCCTCAAGGCCAGGCAGAAAATCGCCGTGAA...TAGACATGCATCTGCCCTTGGAGGCCTTGAACAATCAGCAGTGGTAGCAAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp CATATGATGGGGTTGGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATTTCACGGCGATTTTCTaGCTGGCCTTGAGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: HMMGLACPAGAQLGNFLYFTAIF*LALRRH
Trigger: GTGCCTCCTCAAGGCCAGGCAGAAAATCGCCGTGAA...ATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCCAACCCCATCATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp CCAGAACTAGTAGCTAGGGTCAGGAATGGAAGACAGAAGACCTTGCCCCACATAGGGCCCAGGTGGCCCTaGCTTCTTTCCCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: PELVARVRNGRQKTLPHIGPRWP*LLSLFL
Trigger: AAGAAAAAGGGAAAGAAGGCAGGGCCACCTGGGCCC...TATGTGGGGCAAGGTCTTCTGTCTTCCATTCCTGACCCTAGCTACTAGTTCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
CDS-3UTR CCA 90 bp ATGATTCCAAGCCAAAGCAAAGTTCCCAGCTCTGGAGTCCAGCAAGCTGCCACAAATCCCAGGAATTCCTaGAATCCCTGGAGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: MIPSQSKVPSSGVQQAATNPRNS*NPWRSL
Trigger: CAGGGACCTCCAGGGATTCCAGGAATTCCTGGGATT...TGTGGCAGCTTGCTGGACTCCAGAGCTGGGAACTTTGCTTTGGCTTGGAATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp GGAAGATGTTCTGGCAACATTAAGGCCTTTGTAATATGGCAGGAGGAGAGGAGGGCCAGGTGGGCCAGGTaGTCCCATAACAGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: GRCSGNIKAFVIWQEERRARWAR*SHNSCS
Trigger: GGAACAACTGTTATGGGACCACCTGGCCCACCTGGC...CCTCCTCTCCTCCTGCCATATTACAAAGGCCTTAATGTTGCCAGAACATCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp GCATGGGGCATTTCTCTTTGTGGCTGCAACGCCAGTATACCTCATTCCACACACGGAGAAGGACAAAAGTaGAGGGGAGCAAGGTCTGAC +
Preference number: 4 (lower is better)
Translates to: AWGISLCGCNASIPHSTHGEGQK*RGARSD
Trigger: GTCAGACCTTGCTCCCCTCCACTTTTGTCCTTCTCC...GTGTGTGGAATGAGGTATACTGGCGTTGCAGCCACAAAGAGAAATGCCCCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
CDS-3UTR TCA 90 bp AAGTCTCATGAACCTAGCATAAGACAATGCAGGAAAACTGGTGGAGGTGCCTTTTCCAAAGGCTGCTGTTaGAAGGACGGCTGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: KSHEPSIRQCRKTGGGAFSKGCC*KDGCPR
Trigger: CCTGGGGCAGCCGTCCTTTCAACAGCAGCCTTTGGA...AAAGGCACCTCCACCAGTTTTCCTGCATTGTCTTATGCTAGGTTCATGAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp TGGCCTACTGTCTTGGATCCTCATTTTAGTGCAACAAATGATACATCTGATGAGTTAGGGTGCCAGAGGTaGCAGGAGCACCCGGGCCAC +
Preference number: 4 (lower is better)
Translates to: WPTVLDPHFSATNDTSDELGCQR*QEHPGH
Trigger: GTGGCCCGGGTGCTCCTGGCACCTCTGGCACCCTAA...CTCATCAGATGTATCATTTGTTGCACTAAAATGAGGATCCAAGACAGTAGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp TGGCCTACTGTCTTGGATCCTCATTTTAGTGCAACAAATGATACATCTGATGAGCGAGGCTCCCAGGGCTaGTTAGGGTGCCAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: WPTVLDPHFSATNDTSDERGSQG*LGCQRC
Trigger: GCACCTCTGGCACCCTAAGCAGCCCTGGGAGCCTCG...CTCATCAGATGTATCATTTGTTGCACTAAAATGAGGATCCAAGACAGTAGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp AGGGAGTGTAGGGTTTGGGAATTCCAAAATTTACTGTGGCAGGTAACTGCTGAGATGCTGCGGGTGCACTaGAGGAAGGGCTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: RECRVWEFQNLLWQVTAEMLRVH*RKGFSS
Trigger: GGATGAGAAGCCCTTCCTGCAGTGCACCCGCAGCAT...CTCAGCAGTTACCTGCCACAGTAAATTTTGGAATTCCCAAACCCTACACTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp GGCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCATGTGGCTTTGGAATGGTCCCTGTCTCAATGCTaGGGGTGCACTGCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: GTVRKLPLFLHSHVALEWSLSQC*GCTAGR
Trigger: CCTTCCTGCAGTGCACCCGCAGCATTGAGACAGGGA...CCATTCCAAAGCCACATGGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp GCTCCGTCAACTGTCCTGGCAACTCAAGGTCTTTCTGGGAAGTCACATAGGCCTATAGAGATGTCAGCGTaGACCATCTTCACGGCGATT +
Preference number: 4 (lower is better)
Translates to: APSTVLATQGLSGKSHRPIEMSA*TIFTAI
Trigger: AATCGCCGTGAAGATGGTGCACGCTGACATCTCTAT...AGGCCTATGTGACTTCCCAGAAAGACCTTGAGTTGCCAGGACAGTTGACGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp GGAAGATGTTCTGGCAACATTAAGGCCTTTGTAATATGGCAGGAGGAGAGGAGGGGGCCCAGGTGGCCCTaGCTTCTTTCCCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: GRCSGNIKAFVIWQEERRGPRWP*LLSLFL
Trigger: AAGAAAAAGGGAAAGAAGGCAGGGCCACCTGGGCCC...CCTCCTCTCCTCCTGCCATATTACAAAGGCCTTAATGTTGCCAGAACATCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
CDS-3UTR CCA 90 bp ACCTTGCCCCACATAGCAGCTCGTTGTGTGATGGTTGCTGCTTTTATCAGATGGAATCCCAGGAATTCCTaGAATCCCTGGAGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: TLPHIAARCVMVAAFIRWNPRNS*NPWRSL
Trigger: CAGGGACCTCCAGGGATTCCAGGAATTCCTGGGATT...CCATCTGATAAAAGCAGCAACCATCACACAACGAGCTGCTATGTGGGGCAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp GGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCATAATCCCAGGAATTCCTaGAATCCCTGGAGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: GMSCRGTVRKLPLFLHSHNPRNS*NPWRSL
Trigger: CAGGGACCTCCAGGGATTCCAGGAATTCCTGGGATT...ATGGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp GGCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCATGTGGCTTTGGAATGGGCCAGGTGGGCCAGGTaGTCCCATAACAGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: GTVRKLPLFLHSHVALEWARWAR*SHNSCS
Trigger: GGAACAACTGTTATGGGACCACCTGGCCCACCTGGC...CCATTCCAAAGCCACATGGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp ATAAGACAATGCAGGAAAACTGGTGGAGGTGCCTTTGGATCTGAAGTAGGTGTGGCCAGGTGGGCCAGGTaGTCCCATAACAGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: IRQCRKTGGGAFGSEVGVARWAR*SHNSCS
Trigger: GGAACAACTGTTATGGGACCACCTGGCCCACCTGGC...CACACCTACTTCAGATCCAAAGGCACCTCCACCAGTTTTCCTGCATTGTCTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CAA 72 bp CCTGTGGCAGCCAAGAGACTAGGCAGTACCATAGCATaGCTAGGTTTCTCCCTAGGACTCTGCCATGATATC +
Preference number: 4 (lower is better)
Translates to: PVAAKRLGSTIA*LGFSLGLCHDI
Trigger: GATATCATGGCAGAGTCCTAGGGAGAAACCTAGCAATGCTATGGTACTGCCTAGTCTCTTGGCTGCCACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CAA 72 bp CTAGTAGCTAGGGTCAGGAATGGAAGACAGAAGACCTaGCCCCACATAGCAGCTCGTTGTGTGATGGTTGCT +
Preference number: 4 (lower is better)
Translates to: LVARVRNGRQKT*PHIAARCVMVA
Trigger: AGCAACCATCACACAACGAGCTGCTATGTGGGGCAAGGTCTTCTGTCTTCCATTCCTGACCCTAGCTACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CAA 72 bp ACATCTAGCAGGTACAATTTTGTGCCAGCTTGGCTTTaGAAGCTCAAGCAGCTGGTAGAGGCTCCTGCGGTG +
Preference number: 4 (lower is better)
Translates to: TSSRYNFVPAWL*KLKQLVEAPAV
Trigger: CACCGCAGGAGCCTCTACCAGCTGCTTGAGCTTCAAAAGCCAAGCTGGCACAAAATTGTACCTGCTAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp CCAGAACTAGTAGCTAGGGTCAGGAATGGAAGACAGAAGACCTTGCCCCACATATTTGACTTGAATTGCTaGCCCTTGGCCCTGCAGATG +
Preference number: 4 (lower is better)
Translates to: PELVARVRNGRQKTLPHIFDLNC*PLALQM
Trigger: CATCTGCAGGGCCAAGGGTCAGCAATTCAAGTCAAA...TATGTGGGGCAAGGTCTTCTGTCTTCCATTCCTGACCCTAGCTACTAGTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp TTGTGGCTGCAACGCCAGTATACCTCATTCCACACACAGCAGCACTTAGAGGTTTTTGACTTGAATTGCTaGCCCTTGGCCCTGCAGATG +
Preference number: 4 (lower is better)
Translates to: LWLQRQYTSFHTQQHLEVFDLNC*PLALQM
Trigger: CATCTGCAGGGCCAAGGGTCAGCAATTCAAGTCAAA...AACCTCTAAGTGCTGCTGTGTGTGGAATGAGGTATACTGGCGTTGCAGCCACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp GCTCCGTCAACTGTCCTGGCAACTCAAGGTCTTTCTGGGAAGTCACATAGGCCTAGATCATTTTTGACTTaGATTGCTGACCCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: APSTVLATQGLSGKSHRPRSFLT*IADPWP
Trigger: GGGCCAAGGGTCAGCAATTCAAGTCAAAAATGATCT...AGGCCTATGTGACTTCCCAGAAAGACCTTGAGTTGCCAGGACAGTTGACGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp ACCAGGTTGATCCTTCCAGCTTTAGGCTGTGCCTGGTACCCTGAAGCTAGGCAAAGATCATTTTTGACTTaGATTGCTGACCCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: TRLILPALGCAWYPEARQRSFLT*IADPWP
Trigger: GGGCCAAGGGTCAGCAATTCAAGTCAAAAATGATCT...TTGCCTAGCTTCAGGGTACCAGGCACAGCCTAAAGCTGGAAGGATCAACCTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp TTGGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCCTACCTGACTATAGATaGAGTAGGTGCCGTCCACCA +
Preference number: 4 (lower is better)
Translates to: LACPAGAQLGNFLYFSIALPDYR*SRCRPP
Trigger: TGGTGGACGGCACCTACTTCATCTATAGTCAGGTAG...GGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113779.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp ACCAGTAGCCACATAACATCTAGCAGGTACAATTTTGTGCCAGCTTGGCTTTTGATGCTGCGGGTGCACTaGAGGAAGGGCTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: TSSHITSSRYNFVPAWLLMLRVH*RKGFSS
Trigger: GGATGAGAAGCCCTTCCTGCAGTGCACCCGCAGCAT...CAAAAGCCAAGCTGGCACAAAATTGTACCTGCTAGATGTTATGTGGCTACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp AGGGAGTGTAGGGTTTGGGAATTCCAAAATTTACTGTGGCAGGTAACTGCTGAGTCTCAATGCTGCGGGTaGACTGCAGGAAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: RECRVWEFQNLLWQVTAESQCCG*TAGRAS
Trigger: AGAAGCCCTTCCTGCAGTGCACCCGCAGCATTGAGA...CTCAGCAGTTACCTGCCACAGTAAATTTTGGAATTCCCAAACCCTACACTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp TGTGTGATGGTTGCTGCTTTTATCAGATGGGTGAAAGGTCATGAAGGCTCCAAGTCTCAATGCTGCGGGTaGACTGCAGGAAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: CVMVAAFIRWVKGHEGSKSQCCG*TAGRAS
Trigger: AGAAGCCCTTCCTGCAGTGCACCCGCAGCATTGAGA...CTTGGAGCCTTCATGACCTTTCACCCATCTGATAAAAGCAGCAACCATCACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp GGTGCACAAATATCTTGGGGGACTATGTGTGGGGAGGCAAGTTGTGATGGAGATGAGGAGGCACACGCCTaGAGTATAGCAAGTGTTGTA +
Preference number: 4 (lower is better)
Translates to: GAQISWGTMCGEASCDGDEEAHA*SIASVV
Trigger: TACAACACTTGCTATACTGCAGGCGTGTGCCTCCTC...ATCTCCATCACAACTTGCCTCCCCACACATAGTCCCCCAAGATATTTGTGCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp CTTGGGTCTCAACAAAAGTGGACAACATTTCCTGTTCTATCCCCACTTTCTCCCTTCACGGCGATTTTCTaGCTGGCCTTGAGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: LGSQQKWTTFPVLSPLSPFTAIF*LALRRH
Trigger: GTGCCTCCTCAAGGCCAGGCAGAAAATCGCCGTGAA...GGGAGAAAGTGGGGATAGAACAGGAAATGTTGTCCACTTTTGTTGAGACCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp TATTGCCCAGGTCTTTGCCACAAGGACTTGCCTTCTTCTGACCTGACCCTCTCCAGCAAGTGTTGTAGTTaGTCTTCCCTGTCTCAATGC +
Preference number: 4 (lower is better)
Translates to: YCPGLCHKDLPSSDLTLSSKCCS*SSLSQC
Trigger: GCATTGAGACAGGGAAGACCAACTACAACACTTGCT...GGAGAGGGTCAGGTCAGAAGAAGGCAAGTCCTTGTGGCAAAGACCTGGGCAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp CCCACTTTCTCCCCCTCCCTGGGAAAGGTAGAAAAGCTATACTGTGCTGATGCCAGCAAGTGTTGTAGTTaGTCTTCCCTGTCTCAATGC +
Preference number: 4 (lower is better)
Translates to: PTFSPSLGKVEKLYCADASKCCS*SSLSQC
Trigger: GCATTGAGACAGGGAAGACCAACTACAACACTTGCT...GGCATCAGCACAGTATAGCTTTTCTACCTTTCCCAGGGAGGGGGAGAAAGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CAA 72 bp TTGGTAGGTTATTGCCCAGGTCTTTGCCACAAGGACTaGCCTTCTTCTGACCTGACCCTCTCCTTAAGTTGC +
Preference number: 4 (lower is better)
Translates to: LVGYCPGLCHKD*PSSDLTLSLSC
Trigger: GCAACTTAAGGAGAGGGTCAGGTCAGAAGAAGGCAAGTCCTTGTGGCAAAGACCTGGGCAATAACCTACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp GGAAGATGTTCTGGCAACATTAAGGCCTTTGTAATATGGCAGGAGGAGAGGAGGTTTGACTTGAATTGCTaGCCCTTGGCCCTGCAGATG +
Preference number: 4 (lower is better)
Translates to: GRCSGNIKAFVIWQEERRFDLNC*PLALQM
Trigger: CATCTGCAGGGCCAAGGGTCAGCAATTCAAGTCAAA...CCTCCTCTCCTCCTGCCATATTACAAAGGCCTTAATGTTGCCAGAACATCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp GCACAAATATCTTGGGGGACTATGTGTGGGGAGGCAAGTTGTGATGGAGATTGTTTTGACTTGAATTGCTaGCCCTTGGCCCTGCAGATG +
Preference number: 4 (lower is better)
Translates to: AQISWGTMCGEASCDGDCFDLNC*PLALQM
Trigger: CATCTGCAGGGCCAAGGGTCAGCAATTCAAGTCAAA...ACAATCTCCATCACAACTTGCCTCCCCACACATAGTCCCCCAAGATATTTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp AGCCTAAGAAGGTTCTGCTTCTTGACAACCCTGGGGCTCCGTCAACTGTCCTGGATTGAGCACTCCACCTaGAAGATCATTTTTGACTTG +
Preference number: 4 (lower is better)
Translates to: SLRRFCFLTTLGLRQLSWIEHST*KIIFDL
Trigger: CAAGTCAAAAATGATCTTTCAGGTGGAGTGCTCAAT...CCAGGACAGTTGACGGAGCCCCAGGGTTGTCAAGAAGCAGAACCTTCTTAGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp GCACAAATATCTTGGGGGACTATGTGTGGGGAGGCAAGTTGTGATGGAGATTGTTGCGAGACCAGTCATTaGGCACTCCACCTGAAAGAT +
Preference number: 4 (lower is better)
Translates to: AQISWGTMCGEASCDGDCCETSH*ALHLKD
Trigger: ATCTTTCAGGTGGAGTGCTCAATGACTGGTCTCGCA...ACAATCTCCATCACAACTTGCCTCCCCACACATAGTCCCCCAAGATATTTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp TGGCCTACTGTCTTGGATCCTCATTTTAGTGCAACAAATGATACATCTGATGAGTTTTCTGCCTGGCCTTaGGGAGGCACACGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: WPTVLDPHFSATNDTSDEFSAWP*GGTRLQ
Trigger: CTGCAGGCGTGTGCCTCCTCAAGGCCAGGCAGAAAA...CTCATCAGATGTATCATTTGTTGCACTAAAATGAGGATCCAAGACAGTAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp CCCACTTTCTCCCCCTCCCTGGGAAAGGTAGAAAAGCTATACTGTGCTGATGCCTTTTGCTTCTCTTATTaGGGCGAACACGCCTACTTT +
Preference number: 4 (lower is better)
Translates to: PTFSPSLGKVEKLYCADAFCFSY*GEHAYF
Trigger: AAAGTAGGCGTGTTCGCCGCAATAAGAGAAGCAAAA...GGCATCAGCACAGTATAGCTTTTCTACCTTTCCCAGGGAGGGGGAGAAAGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp ACCAGGTTGATCCTTCCAGCTTTAGGCTGTGCCTGGTACCCTGAAGCTAGGCAATTTTGCTTCTCTTATTaGGGCGAACACGCCTACTTT +
Preference number: 4 (lower is better)
Translates to: TRLILPALGCAWYPEARQFCFSY*GEHAYF
Trigger: AAAGTAGGCGTGTTCGCCGCAATAAGAGAAGCAAAA...TTGCCTAGCTTCAGGGTACCAGGCACAGCCTAAAGCTGGAAGGATCAACCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp ACCAGTAGCCACATAACATCTAGCAGGTACAATTTTGTGCCAGCTTGGCTTTTGTCTCAATGCTGCGGGTaGACTGCAGGAAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: TSSHITSSRYNFVPAWLLSQCCG*TAGRAS
Trigger: AGAAGCCCTTCCTGCAGTGCACCCGCAGCATTGAGA...CAAAAGCCAAGCTGGCACAAAATTGTACCTGCTAGATGTTATGTGGCTACTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp ATTCTCGGGAGGGCAACCTCTCAACATCAACAGAGGAAGATGTTCTGGCAACATGAGGAGGCACACGCCTaGAGTATAGCAAGTGTTGTA +
Preference number: 4 (lower is better)
Translates to: ILGRATSQHQQRKMFWQHEEAHA*SIASVV
Trigger: TACAACACTTGCTATACTGCAGGCGTGTGCCTCCTC...ATGTTGCCAGAACATCTTCCTCTGTTGATGTTGAGAGGTTGCCCTCCCGAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp AGCTTGGCTTTTGAAGCTCAAGCAGCTGGTAGAGGCTCCTGCGGTGCAATTTTTATAGAGATGTCAGCGTaGACCATCTTCACGGCGATT +
Preference number: 4 (lower is better)
Translates to: SLAFEAQAAGRGSCGAIFIEMSA*TIFTAI
Trigger: AATCGCCGTGAAGATGGTGCACGCTGACATCTCTAT...AAAAATTGCACCGCAGGAGCCTCTACCAGCTGCTTGAGCTTCAAAAGCCAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp ACCAGTAGCCACATAACATCTAGCAGGTACAATTTTGTGCCAGCTTGGCTTTTGGGGCCCAGGTGGCCCTaGCTTCTTTCCCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: TSSHITSSRYNFVPAWLLGPRWP*LLSLFL
Trigger: AAGAAAAAGGGAAAGAAGGCAGGGCCACCTGGGCCC...CAAAAGCCAAGCTGGCACAAAATTGTACCTGCTAGATGTTATGTGGCTACTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
CDS-3UTR GCA 90 bp TGCCACCGATCTTCAAACTCTAAGGGGCTTTTGGAGGTTATCCAGTTTAACCATGGGCCCAGGTGGCCCTaGCTTCTTTCCCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: CHRSSNSKGLLEVIQFNHGPRWP*LLSLFL
Trigger: AAGAAAAAGGGAAAGAAGGCAGGGCCACCTGGGCCC...ATGGTTAAACTGGATAACCTCCAAAAGCCCCTTAGAGTTTGAAGATCGGTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
CDS-3UTR CCA 90 bp TTTCAGATAAGAGCTTGGGTCTCAACAAAAGTGGACAACATTTCCTGTTCTATCGCCGTTGGGCCCAGGTaGCCCTGCCTTCTTTCCATC +
Preference number: 4 (lower is better)
Translates to: FQIRAWVSTKVDNISCSIAVGPR*PCLLSI
Trigger: GATGGAAAGAAGGCAGGGCCACCTGGGCCCAACGGC...GATAGAACAGGAAATGTTGTCCACTTTTGTTGAGACCCAAGCTCTTATCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp GAACCTAGCATAAGACAATGCAGGAAAACTGGTGGAGGTGCCTTTGGATCTGAAAATCCCAGGAATTCCTaGAATCCCTGGAGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: EPSIRQCRKTGGGAFGSENPRNS*NPWRSL
Trigger: CAGGGACCTCCAGGGATTCCAGGAATTCCTGGGATT...TTCAGATCCAAAGGCACCTCCACCAGTTTTCCTGCATTGTCTTATGCTAGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp CCTCTAGTAGGTTATAGTGCAATGCAGCAAGAATGCCTCTTCTGTCAAGGATATGCCAGGTGGGCCAGGTaGTCCCATAACAGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: PLVGYSAMQQECLFCQGYARWAR*SHNSCS
Trigger: GGAACAACTGTTATGGGACCACCTGGCCCACCTGGC...ATATCCTTGACAGAAGAGGCATTCTTGCTGCATTGCACTATAACCTACTAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CAA 72 bp GCTGAGTGCCACCGATCTTCAAACTCTAAGGGGCTTTaGGAGGTTATCCAGTTTAACCATCTGTTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: AECHRSSNSKGL*EVIQFNHLFPD
Trigger: GTCTGGGAACAGATGGTTAAACTGGATAACCTCCAAAAGCCCCTTAGAGTTTGAAGATCGGTGGCACTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
3UTR CAA 72 bp AGTGGGCCATGGCCTGCTGCTCTTTCAGATAAGAGCTaGGGTCTCAACAAAAGTGGACAACATTTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: SGPWPAALSDKS*GLNKSGQHFLF
Trigger: GAACAGGAAATGTTGTCCACTTTTGTTGAGACCCAAGCTCTTATCTGAAAGAGCAGCAGGCCATGGCCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp GCTCCGTCAACTGTCCTGGCAACTCAAGGTCTTTCTGGGAAGTCACATAGGCCTATTGAGCACTCCACCTaGAAGATCATTTTTGACTTG +
Preference number: 4 (lower is better)
Translates to: APSTVLATQGLSGKSHRPIEHST*KIIFDL
Trigger: CAAGTCAAAAATGATCTTTCAGGTGGAGTGCTCAAT...AGGCCTATGTGACTTCCCAGAAAGACCTTGAGTTGCCAGGACAGTTGACGGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp TGTGTGATGGTTGCTGCTTTTATCAGATGGGTGAAAGGTCATGAAGGCTCCAAGTGCGAGACCAGTCATTaGGCACTCCACCTGAAAGAT +
Preference number: 4 (lower is better)
Translates to: CVMVAAFIRWVKGHEGSKCETSH*ALHLKD
Trigger: ATCTTTCAGGTGGAGTGCTCAATGACTGGTCTCGCA...CTTGGAGCCTTCATGACCTTTCACCCATCTGATAAAAGCAGCAACCATCACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp ATAAGACAATGCAGGAAAACTGGTGGAGGTGCCTTTGGATCTGAAGTAGGTGTGTGCGAGACCAGTCATTaGGCACTCCACCTGAAAGAT +
Preference number: 4 (lower is better)
Translates to: IRQCRKTGGGAFGSEVGVCETSH*ALHLKD
Trigger: ATCTTTCAGGTGGAGTGCTCAATGACTGGTCTCGCA...CACACCTACTTCAGATCCAAAGGCACCTCCACCAGTTTTCCTGCATTGTCTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp GGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCATCTCCTTCACCACTTTTaGTTCTCTTATTGCGGCGAA +
Preference number: 4 (lower is better)
Translates to: GMSCRGTVRKLPLFLHSHLLHHF*FSYCGE
Trigger: TTCGCCGCAATAAGAGAAGCAAAAGTGGTGAAGGAG...ATGGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp TGGCCTACTGTCTTGGATCCTCATTTTAGTGCAACAAATGATACATCTGATGAGTCCCTGTCTCAATGCTaGGGGTGCACTGCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: WPTVLDPHFSATNDTSDESLSQC*GCTAGR
Trigger: CCTTCCTGCAGTGCACCCGCAGCATTGAGACAGGGA...CTCATCAGATGTATCATTTGTTGCACTAAAATGAGGATCCAAGACAGTAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp CCTCTAGTAGGTTATAGTGCAATGCAGCAAGAATGCCTCTTCTGTCAAGGATATTTCACGGCGATTTTCTaGCTGGCCTTGAGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: PLVGYSAMQQECLFCQGYFTAIF*LALRRH
Trigger: GTGCCTCCTCAAGGCCAGGCAGAAAATCGCCGTGAA...ATATCCTTGACAGAAGAGGCATTCTTGCTGCATTGCACTATAACCTACTAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp GGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCATCATAACAGTTGTTCCTaGAATCCCAGGAATTCCTGG +
Preference number: 4 (lower is better)
Translates to: GMSCRGTVRKLPLFLHSHHNSCS*NPRNSW
Trigger: CCAGGAATTCCTGGGATTCCAGGAACAACTGTTATG...ATGGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp GGTGCACAAATATCTTGGGGGACTATGTGTGGGGAGGCAAGTTGTGATGGAGATCATAACAGTTGTTCCTaGAATCCCAGGAATTCCTGG +
Preference number: 4 (lower is better)
Translates to: GAQISWGTMCGEASCDGDHNSCS*NPRNSW
Trigger: CCAGGAATTCCTGGGATTCCAGGAACAACTGTTATG...ATCTCCATCACAACTTGCCTCCCCACACATAGTCCCCCAAGATATTTGTGCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp GCTACCACTGCTGATTGTTCAAGGCCTCCAAGGGCAGATGCATGTCTAAAATCGAGCAAGTGTTGTAGTTaGTCTTCCCTGTCTCAATGC +
Preference number: 4 (lower is better)
Translates to: ATTADCSRPPRADACLKSSKCCS*SSLSQC
Trigger: GCATTGAGACAGGGAAGACCAACTACAACACTTGCT...CGATTTTAGACATGCATCTGCCCTTGGAGGCCTTGAACAATCAGCAGTGGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp ACAGAAGACCTTGCCCCACATAGCAGCTCGTTGTGTGATGGTTGCTGCTTTTATAGATCATTTTTGACTTaGATTGCTGACCCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: TEDLAPHSSSLCDGCCFYRSFLT*IADPWP
Trigger: GGGCCAAGGGTCAGCAATTCAAGTCAAAAATGATCT...ATAAAAGCAGCAACCATCACACAACGAGCTGCTATGTGGGGCAAGGTCTTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp ACCAGTAGCCACATAACATCTAGCAGGTACAATTTTGTGCCAGCTTGGCTTTTGCTACCTGACTATAGATaGAGTAGGTGCCGTCCACCA +
Preference number: 4 (lower is better)
Translates to: TSSHITSSRYNFVPAWLLLPDYR*SRCRPP
Trigger: TGGTGGACGGCACCTACTTCATCTATAGTCAGGTAG...CAAAAGCCAAGCTGGCACAAAATTGTACCTGCTAGATGTTATGTGGCTACTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113779.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp ACCAGTAGCCACATAACATCTAGCAGGTACAATTTTGTGCCAGCTTGGCTTTTGAGGTCTGACTATAGATaGAGTAGGTGCCGTCCACCA +
Preference number: 4 (lower is better)
Translates to: TSSHITSSRYNFVPAWLLRSDYR*SRCRPP
Trigger: TGGTGGACGGCACCTACTTCATCTATAGTCAGACCT...CAAAAGCCAAGCTGGCACAAAATTGTACCTGCTAGATGTTATGTGGCTACTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
CDS-3UTR GCA 90 bp ATTCTCGGGAGGGCAACCTCTCAACATCAACAGAGGAAGATGTTCTGGCAACATCTCCTTCACCACTTTTaGTTCTCTTATTGCGGCGAA +
Preference number: 4 (lower is better)
Translates to: ILGRATSQHQQRKMFWQHLLHHF*FSYCGE
Trigger: TTCGCCGCAATAAGAGAAGCAAAAGTGGTGAAGGAG...ATGTTGCCAGAACATCTTCCTCTGTTGATGTTGAGAGGTTGCCCTCCCGAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp GGAAGATGTTCTGGCAACATTAAGGCCTTTGTAATATGGCAGGAGGAGAGGAGGCTCCTTCACCACTTTTaGTTCTCTTATTGCGGCGAA +
Preference number: 4 (lower is better)
Translates to: GRCSGNIKAFVIWQEERRLLHHF*FSYCGE
Trigger: TTCGCCGCAATAAGAGAAGCAAAAGTGGTGAAGGAG...CCTCCTCTCCTCCTGCCATATTACAAAGGCCTTAATGTTGCCAGAACATCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp GCACAAATATCTTGGGGGACTATGTGTGGGGAGGCAAGTTGTGATGGAGATTGTCTCCTTCACCACTTTTaGTTCTCTTATTGCGGCGAA +
Preference number: 4 (lower is better)
Translates to: AQISWGTMCGEASCDGDCLLHHF*FSYCGE
Trigger: TTCGCCGCAATAAGAGAAGCAAAAGTGGTGAAGGAG...ACAATCTCCATCACAACTTGCCTCCCCACACATAGTCCCCCAAGATATTTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp TGGCCTACTGTCTTGGATCCTCATTTTAGTGCAACAAATGATACATCTGATGAGTCTCAATGCTGCGGGTaGACTGCAGGAAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: WPTVLDPHFSATNDTSDESQCCG*TAGRAS
Trigger: AGAAGCCCTTCCTGCAGTGCACCCGCAGCATTGAGA...CTCATCAGATGTATCATTTGTTGCACTAAAATGAGGATCCAAGACAGTAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp TGGCCTACTGTCTTGGATCCTCATTTTAGTGCAACAAATGATACATCTGATGAGGGGCCCAGGTGGCCCTaGCTTCTTTCCCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: WPTVLDPHFSATNDTSDEGPRWP*LLSLFL
Trigger: AAGAAAAAGGGAAAGAAGGCAGGGCCACCTGGGCCC...CTCATCAGATGTATCATTTGTTGCACTAAAATGAGGATCCAAGACAGTAGGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
3UTR CAA 72 bp AGTCACTGGGGAATAAATAGCATGGGGCATTTCTCTTaGTGGCTGCAACGCCAGTATACCTCATTCCACACA +
Preference number: 4 (lower is better)
Translates to: SHWGINSMGHFS*WLQRQYTSFHT
Trigger: TGTGTGGAATGAGGTATACTGGCGTTGCAGCCACAAAGAGAAATGCCCCATGCTATTTATTCCCCAGTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp TGTGTGATGGTTGCTGCTTTTATCAGATGGGTGAAAGGTCATGAAGGCTCCAAGAGATCATTTTTGACTTaGATTGCTGACCCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: CVMVAAFIRWVKGHEGSKRSFLT*IADPWP
Trigger: GGGCCAAGGGTCAGCAATTCAAGTCAAAAATGATCT...CTTGGAGCCTTCATGACCTTTCACCCATCTGATAAAAGCAGCAACCATCACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp CCTCTAGTAGGTTATAGTGCAATGCAGCAAGAATGCCTCTTCTGTCAAGGATATCCACCATTTTTGACTTaGATTGCTGACCCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: PLVGYSAMQQECLFCQGYPPFLT*IADPWP
Trigger: GGGCCAAGGGTCAGCAATTCAAGTCAAAAATGGTGG...ATATCCTTGACAGAAGAGGCATTCTTGCTGCATTGCACTATAACCTACTAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113778.8
ENSMUST00000113781.8
CDS-3UTR GCA 90 bp GGAAGATGTTCTGGCAACATTAAGGCCTTTGTAATATGGCAGGAGGAGAGGAGGTTTTGCTTCTCTTATTaGGGCGAACACGCCTACTTT +
Preference number: 4 (lower is better)
Translates to: GRCSGNIKAFVIWQEERRFCFSY*GEHAYF
Trigger: AAAGTAGGCGTGTTCGCCGCAATAAGAGAAGCAAAA...CCTCCTCTCCTCCTGCCATATTACAAAGGCCTTAATGTTGCCAGAACATCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp GGCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCATGTGGCTTTGGAATGGCTCCTTCACCACTTTTaGTTCTCTTATTGCGGCGAA +
Preference number: 4 (lower is better)
Translates to: GTVRKLPLFLHSHVALEWLLHHF*FSYCGE
Trigger: TTCGCCGCAATAAGAGAAGCAAAAGTGGTGAAGGAG...CCATTCCAAAGCCACATGGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp TTTGAGCCTCTAGTAGGTTATAGTGCAATGCAGCAAGAATGCCTCTTCTGTCAAGAGGAGGCACACGCCTaGAGTATAGCAAGTGTTGTA +
Preference number: 4 (lower is better)
Translates to: FEPLVGYSAMQQECLFCQEEAHA*SIASVV
Trigger: TACAACACTTGCTATACTGCAGGCGTGTGCCTCCTC...TTGACAGAAGAGGCATTCTTGCTGCATTGCACTATAACCTACTAGAGGCTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp CCTCTAGTAGGTTATAGTGCAATGCAGCAAGAATGCCTCTTCTGTCAAGGATATGAGGAGGCACACGCCTaGAGTATAGCAAGTGTTGTA +
Preference number: 4 (lower is better)
Translates to: PLVGYSAMQQECLFCQGYEEAHA*SIASVV
Trigger: TACAACACTTGCTATACTGCAGGCGTGTGCCTCCTC...ATATCCTTGACAGAAGAGGCATTCTTGCTGCATTGCACTATAACCTACTAGAGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp TGTGTGATGGTTGCTGCTTTTATCAGATGGGTGAAAGGTCATGAAGGCTCCAAGCATAACAGTTGTTCCTaGAATCCCAGGAATTCCTGG +
Preference number: 4 (lower is better)
Translates to: CVMVAAFIRWVKGHEGSKHNSCS*NPRNSW
Trigger: CCAGGAATTCCTGGGATTCCAGGAACAACTGTTATG...CTTGGAGCCTTCATGACCTTTCACCCATCTGATAAAAGCAGCAACCATCACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp CCCATTCTCTATGCTAACCTTGGGATAACTTCACATCATGACAATTCCAAACTGGGAGAAGGACAAAAGTaGAGGGGAGCAAGGTCTGAC +
Preference number: 4 (lower is better)
Translates to: PILYANLGITSHHDNSKLGEGQK*RGARSD
Trigger: GTCAGACCTTGCTCCCCTCCACTTTTGTCCTTCTCC...CAGTTTGGAATTGTCATGATGTGAAGTTATCCCAAGGTTAGCATAGAGAATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
CDS-3UTR TCA 90 bp TGGCCTACTGTCTTGGATCCTCATTTTAGTGCAACAAATGATACATCTGATGAGTTTGACTTGAATTGCTaGCCCTTGGCCCTGCAGATG +
Preference number: 4 (lower is better)
Translates to: WPTVLDPHFSATNDTSDEFDLNC*PLALQM
Trigger: CATCTGCAGGGCCAAGGGTCAGCAATTCAAGTCAAA...CTCATCAGATGTATCATTTGTTGCACTAAAATGAGGATCCAAGACAGTAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp TTGTGGCTGCAACGCCAGTATACCTCATTCCACACACAGCAGCACTTAGAGGTTCTGAAAGATCATTTTTaGCTTGAATTGCTGACCCTT +
Preference number: 4 (lower is better)
Translates to: LWLQRQYTSFHTQQHLEVLKDHF*LELLTL
Trigger: AAGGGTCAGCAATTCAAGTCAAAAATGATCTTTCAG...AACCTCTAAGTGCTGCTGTGTGTGGAATGAGGTATACTGGCGTTGCAGCCACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp GGTGCACAAATATCTTGGGGGACTATGTGTGGGGAGGCAAGTTGTGATGGAGATCTGAAAGATCATTTTTaGCTTGAATTGCTGACCCTT +
Preference number: 4 (lower is better)
Translates to: GAQISWGTMCGEASCDGDLKDHF*LELLTL
Trigger: AAGGGTCAGCAATTCAAGTCAAAAATGATCTTTCAG...ATCTCCATCACAACTTGCCTCCCCACACATAGTCCCCCAAGATATTTGTGCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp CATATGATGGGGTTGGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATCTGAAAGATCATTTTTaGCTTGAATTGCTGACCCTT +
Preference number: 4 (lower is better)
Translates to: HMMGLACPAGAQLGNFLYLKDHF*LELLTL
Trigger: AAGGGTCAGCAATTCAAGTCAAAAATGATCTTTCAG...ATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCCAACCCCATCATATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp ACCAGTAGCCACATAACATCTAGCAGGTACAATTTTGTGCCAGCTTGGCTTTTGGCACTCCACCATTTTTaGCTTGAATTGCTGACCCTT +
Preference number: 4 (lower is better)
Translates to: TSSHITSSRYNFVPAWLLALHHF*LELLTL
Trigger: AAGGGTCAGCAATTCAAGTCAAAAATGGTGGAGTGC...CAAAAGCCAAGCTGGCACAAAATTGTACCTGCTAGATGTTATGTGGCTACTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000113778.8
ENSMUST00000113781.8
CDS-3UTR GCA 90 bp GGCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCATGTGGCTTTGGAATGGTTTTGCTTCTCTTATTaGGGCGAACACGCCTACTTT +
Preference number: 4 (lower is better)
Translates to: GTVRKLPLFLHSHVALEWFCFSY*GEHAYF
Trigger: AAAGTAGGCGTGTTCGCCGCAATAAGAGAAGCAAAA...CCATTCCAAAGCCACATGGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp TCAGATAAGAGCTTGGGTCTCAACAAAAGTGGACAACATTTCCTGTTCTATCCCATAGAGATGTCAGCGTaGACCATCTTCACGGCGATT +
Preference number: 4 (lower is better)
Translates to: SDKSLGLNKSGQHFLFYPIEMSA*TIFTAI
Trigger: AATCGCCGTGAAGATGGTGCACGCTGACATCTCTAT...GGGATAGAACAGGAAATGTTGTCCACTTTTGTTGAGACCCAAGCTCTTATCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp AAGTCTCATGAACCTAGCATAAGACAATGCAGGAAAACTGGTGGAGGTGCCTTTCATAACAGTTGTTCCTaGAATCCCAGGAATTCCTGG +
Preference number: 4 (lower is better)
Translates to: KSHEPSIRQCRKTGGGAFHNSCS*NPRNSW
Trigger: CCAGGAATTCCTGGGATTCCAGGAACAACTGTTATG...AAAGGCACCTCCACCAGTTTTCCTGCATTGTCTTATGCTAGGTTCATGAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp CCTCTAGTAGGTTATAGTGCAATGCAGCAAGAATGCCTCTTCTGTCAAGGATATAGATCATTTTTGACTTaGATTGCTGACCCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: PLVGYSAMQQECLFCQGYRSFLT*IADPWP
Trigger: GGGCCAAGGGTCAGCAATTCAAGTCAAAAATGATCT...ATATCCTTGACAGAAGAGGCATTCTTGCTGCATTGCACTATAACCTACTAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp GGCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCATGTGGCTTTGGAATGGATTGAGCACTCCACCTaGAAGATCATTTTTGACTTG +
Preference number: 4 (lower is better)
Translates to: GTVRKLPLFLHSHVALEWIEHST*KIIFDL
Trigger: CAAGTCAAAAATGATCTTTCAGGTGGAGTGCTCAAT...CCATTCCAAAGCCACATGGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp TGCCACCGATCTTCAAACTCTAAGGGGCTTTTGGAGGTTATCCAGTTTAACCATTTTTGCTTCTCTTATTaGGGCGAACACGCCTACTTT +
Preference number: 4 (lower is better)
Translates to: CHRSSNSKGLLEVIQFNHFCFSY*GEHAYF
Trigger: AAAGTAGGCGTGTTCGCCGCAATAAGAGAAGCAAAA...ATGGTTAAACTGGATAACCTCCAAAAGCCCCTTAGAGTTTGAAGATCGGTGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp TCAGATAAGAGCTTGGGTCTCAACAAAAGTGGACAACATTTCCTGTTCTATCCCCTCCTTCACCACTTTTaGTTCTCTTATTGCGGCGAA +
Preference number: 4 (lower is better)
Translates to: SDKSLGLNKSGQHFLFYPLLHHF*FSYCGE
Trigger: TTCGCCGCAATAAGAGAAGCAAAAGTGGTGAAGGAG...GGGATAGAACAGGAAATGTTGTCCACTTTTGTTGAGACCCAAGCTCTTATCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CCA 90 bp AGTTTTCTGAGAGTGGAACATAGCTGTAAACACAATGAGACATGCATGACCCCAAGCAAGTGTTGTAGTTaGTCTTCCCTGTCTCAATGC +
Preference number: 4 (lower is better)
Translates to: SFLRVEHSCKHNETCMTPSKCCS*SSLSQC
Trigger: GCATTGAGACAGGGAAGACCAACTACAACACTTGCT...TGGGGTCATGCATGTCTCATTGTGTTTACAGCTATGTTCCACTCTCAGAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp CCCATTCTCTATGCTAACCTTGGGATAACTTCACATCATGACAATTCCAAACTGGCACTCCACCATTTTTaGCTTGAATTGCTGACCCTT +
Preference number: 4 (lower is better)
Translates to: PILYANLGITSHHDNSKLALHHF*LELLTL
Trigger: AAGGGTCAGCAATTCAAGTCAAAAATGGTGGAGTGC...CAGTTTGGAATTGTCATGATGTGAAGTTATCCCAAGGTTAGCATAGAGAATGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113778.8
ENSMUST00000113781.8
CDS-3UTR TCA 90 bp GATATTCTTGATGCATTTCAGGGATGCATTTCCCATCTCCTCAAAAAGAAATACAGACCTGACTATAGATaGAGTAGGTGCCGTCCACCA +
Preference number: 4 (lower is better)
Translates to: DILDAFQGCISHLLKKKYRPDYR*SRCRPP
Trigger: TGGTGGACGGCACCTACTTCATCTATAGTCAGGTCT...GTATTTCTTTTTGAGGAGATGGGAAATGCATCCCTGAAATGCATCAAGAATATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113778.8
ENSMUST00000113781.8
CDS-3UTR GCA 90 bp AGTTTTCTGAGAGTGGAACATAGCTGTAAACACAATGAGACATGCATGACCCCATTTTGCTTCTCTTATTaGGGCGAACACGCCTACTTT +
Preference number: 4 (lower is better)
Translates to: SFLRVEHSCKHNETCMTPFCFSY*GEHAYF
Trigger: AAAGTAGGCGTGTTCGCCGCAATAAGAGAAGCAAAA...TGGGGTCATGCATGTCTCATTGTGTTTACAGCTATGTTCCACTCTCAGAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp GATATTCTTGATGCATTTCAGGGATGCATTTCCCATCTCCTCAAAAAGAAATACATAGAGATGTCAGCGTaGACCATCTTCACGGCGATT +
Preference number: 4 (lower is better)
Translates to: DILDAFQGCISHLLKKKYIEMSA*TIFTAI
Trigger: AATCGCCGTGAAGATGGTGCACGCTGACATCTCTAT...GTATTTCTTTTTGAGGAGATGGGAAATGCATCCCTGAAATGCATCAAGAATATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp TTTGAGCCTCTAGTAGGTTATAGTGCAATGCAGCAAGAATGCCTCTTCTGTCAACTGAAAGATCATTTTTaGCTTGAATTGCTGACCCTT +
Preference number: 4 (lower is better)
Translates to: FEPLVGYSAMQQECLFCQLKDHF*LELLTL
Trigger: AAGGGTCAGCAATTCAAGTCAAAAATGATCTTTCAG...TTGACAGAAGAGGCATTCTTGCTGCATTGCACTATAACCTACTAGAGGCTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp AGTTTTCTGAGAGTGGAACATAGCTGTAAACACAATGAGACATGCATGACCCCACTGAAAGATCATTTTTaGCTTGAATTGCTGACCCTT +
Preference number: 4 (lower is better)
Translates to: SFLRVEHSCKHNETCMTPLKDHF*LELLTL
Trigger: AAGGGTCAGCAATTCAAGTCAAAAATGATCTTTCAG...TGGGGTCATGCATGTCTCATTGTGTTTACAGCTATGTTCCACTCTCAGAAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113783.8
CDS-3UTR GCA 90 bp GATATTCTTGATGCATTTCAGGGATGCATTTCCCATCTCCTCAAAAAGAAATACCTCCTTCACCACTTTTaGTTCTCTTATTGCGGCGAA +
Preference number: 4 (lower is better)
Translates to: DILDAFQGCISHLLKKKYLLHHF*FSYCGE
Trigger: TTCGCCGCAATAAGAGAAGCAAAAGTGGTGAAGGAG...GTATTTCTTTTTGAGGAGATGGGAAATGCATCCCTGAAATGCATCAAGAATATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR TCA 90 bp GATATTCTTGATGCATTTCAGGGATGCATTTCCCATCTCCTCAAAAAGAAATACATTGAGCACTCCACCTaGAAGATCATTTTTGACTTG +
Preference number: 4 (lower is better)
Translates to: DILDAFQGCISHLLKKKYIEHST*KIIFDL
Trigger: CAAGTCAAAAATGATCTTTCAGGTGGAGTGCTCAAT...GTATTTCTTTTTGAGGAGATGGGAAATGCATCCCTGAAATGCATCAAGAATATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113783.8
CDS TCA 90 bp GTTCCAAAGGCTGCTGTTGAAAGGACGGCTGCCCCAGGTGGCGGGTaGTGGGACCCACCGGGTCGAGGCTCCCAGGGCTGCTTAGGGTGC +
Preference number: 5 (lower is better)
Translates to: VPKAAVERTAAPGGG*WDPPGRGSQGCLGC
Trigger: GCACCCTAAGCAGCCCTGGGAGCCTCGACCCGGTGGGTCCCATCACCCGCCACCTGGGGCAGCCGTCCTTTCAACAGCAGCCTTTGGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071453.3
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113777.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS TCA 90 bp GCTCTGAGGAGAGCCCCGATGGAGGCACGCAATGAGGGATGGAAATaGATGGCCACTGGCAGACCTGTGGGGAATGGGCCCAGGACAGGA +
Preference number: 5 (lower is better)
Translates to: ALRRAPMEARNEGWK*MATGRPVGNGPRTG
Trigger: TCCTGTCCTGGGCCCATTCCCCACAGGTCTGCCAGTGGCCATTCATTTCCATCCCTCATTGCGTGCCTCCATCGGGGCTCTCCTCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113777.8
CDS CCA 90 bp AGGCACGCAATGAGGGATGGAAATGAATGGCCACTGGCAGACCTGTaGGGAATGGGCCCAGGACAGGAGAAGGACAAAAGTGGAGGGGAG +
Preference number: 5 (lower is better)
Translates to: RHAMRDGNEWPLADL*GMGPGQEKDKSGGE
Trigger: CTCCCCTCCACTTTTGTCCTTCTCCTGTCCTGGGCCCATTCCCCACAGGTCTGCCAGTGGCCATTCATTTCCATCCCTCATTGCGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113777.8
CDS-3UTR CAA 90 bp CAAATCAGGTTCTGTAGTAGGCATGGCCCAGGGAAAGCCCAGGCAAGGGTGGGATTCCAAAGGCTGCTGTaGAAAGGACGGCTGCCCCAG +
Preference number: 5 (lower is better)
Translates to: QIRFCSRHGPGKAQARVGFQRLL*KGRLPQ
Trigger: CTGGGGCAGCCGTCCTTTCAACAGCAGCCTTTGGAA...TCCCACCCTTGCCTGGGCTTTCCCTGGGCCATGCCTACTACAGAACCTGATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CAA 90 bp TTCTGTAGTAGGCATGGCCCAGGGAAAGCCCAGGCAAGGGTGGGACCTCAGGCAGCTCCTTCACCACTTTaGCTTCTCTTATTGCGGCGA +
Preference number: 5 (lower is better)
Translates to: FCSRHGPGKAQARVGPQAAPSPL*LLLLRR
Trigger: TCGCCGCAATAAGAGAAGCAAAAGTGGTGAAGGAGC...TGCCTGAGGTCCCACCCTTGCCTGGGCTTTCCCTGGGCCATGCCTACTACAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CAA 90 bp CAAATCAGGTTCTGTAGTAGGCATGGCCCAGGGAAAGCCCAGGCAAGGGTGGGAGCTCCTTCACCACTTTaGCTTCTCTTATTGCGGCGA +
Preference number: 5 (lower is better)
Translates to: QIRFCSRHGPGKAQARVGAPSPL*LLLLRR
Trigger: TCGCCGCAATAAGAGAAGCAAAAGTGGTGAAGGAGC...TCCCACCCTTGCCTGGGCTTTCCCTGGGCCATGCCTACTACAGAACCTGATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CAA 90 bp GCTACCACTGCTGATTGTTCAAGGCCTCCAAGGGCAGATGCATGTCTAAAATCGTTCCAAAGGCTGCTGTaGAAAGGACGGCTGCCCCAG +
Preference number: 5 (lower is better)
Translates to: ATTADCSRPPRADACLKSFQRLL*KGRLPQ
Trigger: CTGGGGCAGCCGTCCTTTCAACAGCAGCCTTTGGAA...CGATTTTAGACATGCATCTGCCCTTGGAGGCCTTGAACAATCAGCAGTGGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CAA 90 bp TTGGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCTTCCAAAGGCTGCTGTaGAAAGGACGGCTGCCCCAG +
Preference number: 5 (lower is better)
Translates to: LACPAGAQLGNFLYFSIAFQRLL*KGRLPQ
Trigger: CTGGGGCAGCCGTCCTTTCAACAGCAGCCTTTGGAA...GGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CAA 90 bp GCTCCGTCAACTGTCCTGGCAACTCAAGGTCTTTCTGGGAAGTCACATAGGCCTGCTCCTTCACCACTTTaGCTTCTCTTATTGCGGCGA +
Preference number: 5 (lower is better)
Translates to: APSTVLATQGLSGKSHRPAPSPL*LLLLRR
Trigger: TCGCCGCAATAAGAGAAGCAAAAGTGGTGAAGGAGC...AGGCCTATGTGACTTCCCAGAAAGACCTTGAGTTGCCAGGACAGTTGACGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CAA 90 bp TATTGCCCAGGTCTTTGCCACAAGGACTTGCCTTCTTCTGACCTGACCCTCTCCGCTCCTTCACCACTTTaGCTTCTCTTATTGCGGCGA +
Preference number: 5 (lower is better)
Translates to: YCPGLCHKDLPSSDLTLSAPSPL*LLLLRR
Trigger: TCGCCGCAATAAGAGAAGCAAAAGTGGTGAAGGAGC...GGAGAGGGTCAGGTCAGAAGAAGGCAAGTCCTTGTGGCAAAGACCTGGGCAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CAA 90 bp CTTGGGTCTCAACAAAAGTGGACAACATTTCCTGTTCTATCCCCACTTTCTCCCTTCCAAAGGCTGCTGTaGAAAGGACGGCTGCCCCAG +
Preference number: 5 (lower is better)
Translates to: LGSQQKWTTFPVLSPLSPFQRLL*KGRLPQ
Trigger: CTGGGGCAGCCGTCCTTTCAACAGCAGCCTTTGGAA...GGGAGAAAGTGGGGATAGAACAGGAAATGTTGTCCACTTTTGTTGAGACCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CAA 90 bp GCATGGGGCATTTCTCTTTGTGGCTGCAACGCCAGTATACCTCATTCCACACACATGCGAGACCAGTCATaGAGCACTCCACCTGAAAGA +
Preference number: 5 (lower is better)
Translates to: AWGISLCGCNASIPHSTHMRDQS*STPPER
Trigger: TCTTTCAGGTGGAGTGCTCAATGACTGGTCTCGCAT...GTGTGTGGAATGAGGTATACTGGCGTTGCAGCCACAAAGAGAAATGCCCCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113783.8
CDS-3UTR CAA 90 bp CCCACTTTCTCCCCCTCCCTGGGAAAGGTAGAAAAGCTATACTGTGCTGATGCCATGCGAGACCAGTCATaGAGCACTCCACCATTTTTG +
Preference number: 5 (lower is better)
Translates to: PTFSPSLGKVEKLYCADAMRDQS*STPPFL
Trigger: CAAAAATGGTGGAGTGCTCAATGACTGGTCTCGCAT...GGCATCAGCACAGTATAGCTTTTCTACCTTTCCCAGGGAGGGGGAGAAAGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000113778.8
ENSMUST00000113781.8
CDS-3UTR CAA 90 bp ATGATTCCAAGCCAAAGCAAAGTTCCCAGCTCTGGAGTCCAGCAAGCTGCCACACTTTTGCTTCTCTTATaGCGGCGAACACGCCTACTT +
Preference number: 5 (lower is better)
Translates to: MIPSQSKVPSSGVQQAATLLLLL*RRTRLL
Trigger: AAGTAGGCGTGTTCGCCGCAATAAGAGAAGCAAAAG...TGTGGCAGCTTGCTGGACTCCAGAGCTGGGAACTTTGCTTTGGCTTGGAATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CAA 90 bp TTGGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCGCTCCTTCACCACTTTaGCTTCTCTTATTGCGGCGA +
Preference number: 5 (lower is better)
Translates to: LACPAGAQLGNFLYFSIAAPSPL*LLLLRR
Trigger: TCGCCGCAATAAGAGAAGCAAAAGTGGTGAAGGAGC...GGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CAA 90 bp GCTACCACTGCTGATTGTTCAAGGCCTCCAAGGGCAGATGCATGTCTAAAATCGATGCGAGACCAGTCATaGAGCACTCCACCTGAAAGA +
Preference number: 5 (lower is better)
Translates to: ATTADCSRPPRADACLKSMRDQS*STPPER
Trigger: TCTTTCAGGTGGAGTGCTCAATGACTGGTCTCGCAT...CGATTTTAGACATGCATCTGCCCTTGGAGGCCTTGAACAATCAGCAGTGGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113783.8
CDS-3UTR CAA 90 bp CACAGAGCATATGATGGGGTTGGCATGTCCTGCAGGGGCACAGTTAGGAAACTTATGCGAGACCAGTCATaGAGCACTCCACCATTTTTG +
Preference number: 5 (lower is better)
Translates to: HRAYDGVGMSCRGTVRKLMRDQS*STPPFL
Trigger: CAAAAATGGTGGAGTGCTCAATGACTGGTCTCGCAT...AAGTTTCCTAACTGTGCCCCTGCAGGACATGCCAACCCCATCATATGCTCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000113778.8
ENSMUST00000113781.8
CDS-3UTR CAA 90 bp TCAGATAAGAGCTTGGGTCTCAACAAAAGTGGACAACATTTCCTGTTCTATCCCTTCCAAAGGCTGCTGTaGAAAGGACGGCTGCCCCAG +
Preference number: 5 (lower is better)
Translates to: SDKSLGLNKSGQHFLFYPFQRLL*KGRLPQ
Trigger: CTGGGGCAGCCGTCCTTTCAACAGCAGCCTTTGGAA...GGGATAGAACAGGAAATGTTGTCCACTTTTGTTGAGACCCAAGCTCTTATCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CAA 90 bp TATACACAGTATCTCACACAGGATGCTGATTCCCCAAAGCAGCATTGGGCCTGCCTTTTGCTTCTCTTATaGCGGCGAACACGCCTACTT +
Preference number: 5 (lower is better)
Translates to: YTQYLTQDADSPKQHWACLLLLL*RRTRLL
Trigger: AAGTAGGCGTGTTCGCCGCAATAAGAGAAGCAAAAG...GCAGGCCCAATGCTGCTTTGGGGAATCAGCATCCTGTGTGAGATACTGTGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CAA 90 bp CATATGATGGGGTTGGCATGTCCTGCAGGGGCACAGTTAGGAAACTTCCTCTATCTTTTGCTTCTCTTATaGCGGCGAACACGCCTACTT +
Preference number: 5 (lower is better)
Translates to: HMMGLACPAGAQLGNFLYLLLLL*RRTRLL
Trigger: AAGTAGGCGTGTTCGCCGCAATAAGAGAAGCAAAAG...ATAGAGGAAGTTTCCTAACTGTGCCCCTGCAGGACATGCCAACCCCATCATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CAA 90 bp GCACAAATATCTTGGGGGACTATGTGTGGGGAGGCAAGTTGTGATGGAGATTGTGCTCCTTCACCACTTTaGCTTCTCTTATTGCGGCGA +
Preference number: 5 (lower is better)
Translates to: AQISWGTMCGEASCDGDCAPSPL*LLLLRR
Trigger: TCGCCGCAATAAGAGAAGCAAAAGTGGTGAAGGAGC...ACAATCTCCATCACAACTTGCCTCCCCACACATAGTCCCCCAAGATATTTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CAA 90 bp GCACAAATATCTTGGGGGACTATGTGTGGGGAGGCAAGTTGTGATGGAGATTGTATGCGAGACCAGTCATaGAGCACTCCACCTGAAAGA +
Preference number: 5 (lower is better)
Translates to: AQISWGTMCGEASCDGDCMRDQS*STPPER
Trigger: TCTTTCAGGTGGAGTGCTCAATGACTGGTCTCGCAT...ACAATCTCCATCACAACTTGCCTCCCCACACATAGTCCCCCAAGATATTTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113783.8
CDS-3UTR CAA 90 bp GCACAAATATCTTGGGGGACTATGTGTGGGGAGGCAAGTTGTGATGGAGATTGTCTTTTGCTTCTCTTATaGCGGCGAACACGCCTACTT +
Preference number: 5 (lower is better)
Translates to: AQISWGTMCGEASCDGDCLLLLL*RRTRLL
Trigger: AAGTAGGCGTGTTCGCCGCAATAAGAGAAGCAAAAG...ACAATCTCCATCACAACTTGCCTCCCCACACATAGTCCCCCAAGATATTTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CAA 90 bp GGCACAGTTAGGAAACTTCCTCTATTTCTCCATAGCCATGTGGCTTTGGAATGGATGCGAGACCAGTCATaGAGCACTCCACCTGAAAGA +
Preference number: 5 (lower is better)
Translates to: GTVRKLPLFLHSHVALEWMRDQS*STPPER
Trigger: TCTTTCAGGTGGAGTGCTCAATGACTGGTCTCGCAT...CCATTCCAAAGCCACATGGCTATGGAGAAATAGAGGAAGTTTCCTAACTGTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113783.8
CDS-3UTR CAA 90 bp TGTGTGATGGTTGCTGCTTTTATCAGATGGGTGAAAGGTCATGAAGGCTCCAAGCTTTTGCTTCTCTTATaGCGGCGAACACGCCTACTT +
Preference number: 5 (lower is better)
Translates to: CVMVAAFIRWVKGHEGSKLLLLL*RRTRLL
Trigger: AAGTAGGCGTGTTCGCCGCAATAAGAGAAGCAAAAG...CTTGGAGCCTTCATGACCTTTCACCCATCTGATAAAAGCAGCAACCATCACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CAA 90 bp TGCCACCGATCTTCAAACTCTAAGGGGCTTTTGGAGGTTATCCAGTTTAACCATCTTTTGCTTCTCTTATaGCGGCGAACACGCCTACTT +
Preference number: 5 (lower is better)
Translates to: CHRSSNSKGLLEVIQFNHLLLLL*RRTRLL
Trigger: AAGTAGGCGTGTTCGCCGCAATAAGAGAAGCAAAAG...ATGGTTAAACTGGATAACCTCCAAAAGCCCCTTAGAGTTTGAAGATCGGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS-3UTR CAA 90 bp CCTCTAGTAGGTTATAGTGCAATGCAGCAAGAATGCCTCTTCTGTCAAGGATATGCTCCTTCACCACTTTaGCTTCTCTTATTGCGGCGA +
Preference number: 5 (lower is better)
Translates to: PLVGYSAMQQECLFCQGYAPSPL*LLLLRR
Trigger: TCGCCGCAATAAGAGAAGCAAAAGTGGTGAAGGAGC...ATATCCTTGACAGAAGAGGCATTCTTGCTGCATTGCACTATAACCTACTAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS TCA 72 bp GCTGCTGTTGAAAGGACGGCTGCCCCAGGTGGCGGGTaGTGGGACCCACCGGGTCGAGGCTCCCAGGGCTGC +
Preference number: 6 (lower is better)
Translates to: AAVERTAAPGGG*WDPPGRGSQGC
Trigger: GCAGCCCTGGGAGCCTCGACCCGGTGGGTCCCATCACCCGCCACCTGGGGCAGCCGTCCTTTCAACAGCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071453.3
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113777.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
ENSMUST00000113781.8
ENSMUST00000113783.8
CDS TCA 72 bp GGACAAAAGTGGAGGGGAGCAAGGTCTGACTATAGATaGAGTAGGTGCCGTCCACCAGTACCTCCAGCTCCC +
Preference number: 6 (lower is better)
Translates to: GQKWRGARSDYR*SRCRPPVPPAP
Trigger: GGGAGCTGGAGGTACTGGTGGACGGCACCTACTTCATCTATAGTCAGACCTTGCTCCCCTCCACTTTTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113777.8
CDS CCA 72 bp ATGAGGGATGGAAATGAATGGCCACTGGCAGACCTGTaGGGAATGGGCCCAGGACAGGAGAAGGACAAAAGT +
Preference number: 6 (lower is better)
Translates to: MRDGNEWPLADL*GMGPGQEKDKS
Trigger: ACTTTTGTCCTTCTCCTGTCCTGGGCCCATTCCCCACAGGTCTGCCAGTGGCCATTCATTTCCATCCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113777.8
CDS TCA 72 bp GTCATTGAGCACTCCACCATTTTTGACTTGAATTGCTaGCCCTTGGCCCTGCAGATGCACCACAGCTGGCTG +
Preference number: 6 (lower is better)
Translates to: VIEHSTIFDLNC*PLALQMHHSWL
Trigger: CAGCCAGCTGTGGTGCATCTGCAGGGCCAAGGGTCAGCAATTCAAGTCAAAAATGGTGGAGTGCTCAATGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113778.8
ENSMUST00000113781.8
CDS CAA 72 bp TTGTTTTTAACAGGACCATCTGCTCCTTCACCACTTTaGCTTCTCTTATTGCGGCGAACACGCCTACTTTCC +
Preference number: 6 (lower is better)
Translates to: LFLTGPSAPSPL*LLLLRRTRLLS
Trigger: GGAAAGTAGGCGTGTTCGCCGCAATAAGAGAAGCAAAAGTGGTGAAGGAGCAGATGGTCCTGTTAAAAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113777.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8
CDS CAA 90 bp CCCTTTTTCTTGTTTTTAACAGGACCATCTGCTCCTTCACCACTTTaGCTTCTCTTATTGCGGCGAACACGCCTACTTTCCTCTTCAGAA +
Preference number: 6 (lower is better)
Translates to: PFFLFLTGPSAPSPL*LLLLRRTRLLSSSE
Trigger: TTCTGAAGAGGAAAGTAGGCGTGTTCGCCGCAATAAGAGAAGCAAAAGTGGTGAAGGAGCAGATGGTCCTGTTAAAAACAAGAAAAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000113775.8
ENSMUST00000113776.8
ENSMUST00000113777.8
ENSMUST00000113778.8
ENSMUST00000113779.8
ENSMUST00000113780.8