Pregenerated sensors for ECT2L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071392Ensembl transcript IDs: ENSMUST00000095817.5, ENSMUST00000207827.2, ENSMUST00000208948.2, ENSMUST00000209178.2
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTGTTTGAGGAGAGCGCTGCCCTCAGGGGCTTGGCGTACACGTCCTaGACAATTCGCAGCATCTGCACGTACCGTCTCTCGCTCTGCACA | + |
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Preference number: 5 (lower is better) Translates to: LFEESAALRGLAYTS*TIRSICTYRLSLCT Trigger: TGTGCAGAGCGAGAGACGGTACGTGCAGATGCTGCGAATTGTGCAGGACGTGTACGCCAAGCCCCTGAGGGCAGCGCTCTCCTCAAACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS TCA 90 bp | CCCAGGCTCTGTGCCTTCCGCCCTTGTAGAGCTCTGTCTGTGAGCTaGAGCAGGCCCTCCAATGTCACTCCGCTGTGTTCGTACAGCACA | + |
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Preference number: 5 (lower is better) Translates to: PRLCAFRPCRALSVS*SRPSNVTPLCSYST Trigger: TGTGCTGTACGAACACAGCGGAGTGACATTGGAGGGCCTGCTTCAGCTCACAGACAGAGCTCTACAAGGGCGGAAGGCACAGAGCCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS CCA 90 bp | CACTCAGAATGGCTCTGTTTGAGGAGAGCGCTGCCCTCAGGGGCTTaGCGTACACGTCCTGCACAATTCGCAGCATCTGCACGTACCGTC | + |
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Preference number: 5 (lower is better) Translates to: HSEWLCLRRALPSGA*RTRPAQFAASARTV Trigger: GACGGTACGTGCAGATGCTGCGAATTGTGCAGGACGTGTACGCCAAGCCCCTGAGGGCAGCGCTCTCCTCAAACAGAGCCATTCTGAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS TCA 90 bp | ATATCCCCAGGCTCTGTGCCTTCCGCCCTTGTAGAGCTCTGTCTGTaGGCTGAAGCAGGCCCTCCAATGTCACTCCGCTGTGTTCGTACA | + |
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Preference number: 5 (lower is better) Translates to: ISPGSVPSALVELCL*AEAGPPMSLRCVRT Trigger: TGTACGAACACAGCGGAGTGACATTGGAGGGCCTGCTTCAGCTCACAGACAGAGCTCTACAAGGGCGGAAGGCACAGAGCCTGGGGATAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS TCA 90 bp | GTCCTGAGAATTGTCTTCGATGGCACTTCCTTCAGACCCTTCTTTTaGCAGCTCCATCAGTCCATCCGCCAGAGCCTGTGCAGGGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: VLRIVFDGTSFRPFF*QLHQSIRQSLCRAL Trigger: CAAGGCCCTGCACAGGCTCTGGCGGATGGACTGATGGAGCTGTCAAAAGAAGGGTCTGAAGGAAGTGCCATCGAAGACAATTCTCAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 |
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| CDS TCA 90 bp | CTCGCTCTGCACAAGCTCCCTCACAACTTGGGCTCGTGTCTCTACTaGGTTCATCTGGAGCTTCCTCTCCAGCTTAACCAGAACCTCCAC | + |
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Preference number: 5 (lower is better) Translates to: LALHKLPHNLGSCLY*VHLELPLQLNQNLH Trigger: GTGGAGGTTCTGGTTAAGCTGGAGAGGAAGCTCCAGATGAACTCAGTAGAGACACGAGCCCAAGTTGTGAGGGAGCTTGTGCAGAGCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS CCA 90 bp | GGCACTTTTCTCGTCGCCTCTCCTGGAATTCCTCGTCCTCTGTTTTaGGCTCATTCAGTGTCCCATAAACAGCAGCAGCTTCCCTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GTFLVASPGIPRPLF*AHSVSHKQQQLPWV Trigger: CACCCAGGGAAGCTGCTGCTGTTTATGGGACACTGAATGAGCCCAAAACAGAGGACGAGGAATTCCAGGAGAGGCGACGAGAAAAGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS CCA 90 bp | TCCCATAAACAGCAGCAGCTTCCCTGGGTGTTAGCCAGTCCAAGCTaGACACACAGGCAATGTAGTGATGCTTCCAAGCTCCGTATTCAT | + |
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Preference number: 5 (lower is better) Translates to: SHKQQQLPWVLASPS*THRQCSDASKLRIH Trigger: ATGAATACGGAGCTTGGAAGCATCACTACATTGCCTGTGTGTCCAGCTTGGACTGGCTAACACCCAGGGAAGCTGCTGCTGTTTATGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS CCA 90 bp | CTGTTTTGGGCTCATTCAGTGTCCCATAAACAGCAGCAGCTTCCCTaGGTGTTAGCCAGTCCAAGCTGGACACACAGGCAATGTAGTGAT | + |
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Preference number: 5 (lower is better) Translates to: LFWAHSVSHKQQQLP*VLASPSWTHRQCSD Trigger: ATCACTACATTGCCTGTGTGTCCAGCTTGGACTGGCTAACACCCAGGGAAGCTGCTGCTGTTTATGGGACACTGAATGAGCCCAAAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS CCA 90 bp | ACAAGCTCCCTCACAACTTGGGCTCGTGTCTCTACTGAGTTCATCTaGAGCTTCCTCTCCAGCTTAACCAGAACCTCCACATTCAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: TSSLTTWARVSTEFI*SFLSSLTRTSTFRL Trigger: CAACCTGAATGTGGAGGTTCTGGTTAAGCTGGAGAGGAAGCTCCAGATGAACTCAGTAGAGACACGAGCCCAAGTTGTGAGGGAGCTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS TCA 90 bp | ACCTCCACATTCAGGTTGCTTTGGCCTGGACTTGACTTCGAGTCCTaGGAATTGTCTTCGATGGCACTTCCTTCCTTCATGAGTGCATCC | + |
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Preference number: 5 (lower is better) Translates to: TSTFRLLWPGLDFES*ELSSMALPSFMSAS Trigger: GGATGCACTCATGAAGGAAGGAAGTGCCATCGAAGACAATTCTCAGGACTCGAAGTCAAGTCCAGGCCAAAGCAACCTGAATGTGGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS GCA 90 bp | GACTTGATCAATTGCAGTGGTCAGGTCTCCACGGTCCACGTGTCCTaGCGGAGTATGGAGTCTCAGAGCATAGAGAAGGTGAATATATTC | + |
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Preference number: 5 (lower is better) Translates to: DLINCSGQVSTVHVS*RSMESQSIEKVNIF Trigger: GAATATATTCACCTTCTCTATGCTCTGAGACTCCATACTCCGGCAGGACACGTGGACCGTGGAGACCTGACCACTGCAATTGATCAAGTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS CCA 90 bp | TTTAAGGACTGGTTCTTAAAAGGTGTCCAGGCGCTGAACCGAGTGTaGAAACTTTCCACTTCCACACTTTCCAGGGGAAGGCTCCCAAGT | + |
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Preference number: 5 (lower is better) Translates to: FKDWFLKGVQALNRV*KLSTSTLSRGRLPS Trigger: ACTTGGGAGCCTTCCCCTGGAAAGTGTGGAAGTGGAAAGTTTCCACACTCGGTTCAGCGCCTGGACACCTTTTAAGAACCAGTCCTTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS TCA 90 bp | GCATCCATAAGCAATCCTGTTCCGTTAGAAACTTCCAGGGCCAGCTaGCTTGAGCGGCTGCACACAAGTCTTTCGGATTCAGAAAGGAAA | + |
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Preference number: 5 (lower is better) Translates to: ASISNPVPLETSRAS*LERLHTSLSDSERK Trigger: TTTCCTTTCTGAATCCGAAAGACTTGTGTGCAGCCGCTCAAGTCAGCTGGCCCTGGAAGTTTCTAACGGAACAGGATTGCTTATGGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 |
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| CDS TCA 90 bp | ACCTCCACATTCAGGTTGCTTTGGCCTGGACTTGACTTCGAGTCCTaGGAATTGTCTTCGATGGCACTTCCTTCAGACCCTTCTTTTGAC | + |
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Preference number: 5 (lower is better) Translates to: TSTFRLLWPGLDFES*ELSSMALPSDPSFD Trigger: GTCAAAAGAAGGGTCTGAAGGAAGTGCCATCGAAGACAATTCTCAGGACTCGAAGTCAAGTCCAGGCCAAAGCAACCTGAATGTGGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 |
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| CDS GCA 90 bp | GTTGGTATGAACCGGTTGCGATTCCAGTCGGGGCAGAGAACCATGTaGCAGTTAGTTGAGACAGCTGAGAAAGAACTTCTATACCTGCTT | + |
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Preference number: 5 (lower is better) Translates to: VGMNRLRFQSGQRTM*QLVETAEKELLYLL Trigger: AAGCAGGTATAGAAGTTCTTTCTCAGCTGTCTCAACTAACTGGCACATGGTTCTCTGCCCCGACTGGAATCGCAACCGGTTCATACCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS CCA 90 bp | TGCTTTGGCCTGGACTTGACTTCGAGTCCTGAGAATTGTCTTCGATaGCACTTCCTTCAGACCCTTCTTTTGACAGCTCCATCAGTCCAT | + |
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Preference number: 5 (lower is better) Translates to: CFGLDLTSSPENCLR*HFLQTLLLTAPSVH Trigger: ATGGACTGATGGAGCTGTCAAAAGAAGGGTCTGAAGGAAGTGCCATCGAAGACAATTCTCAGGACTCGAAGTCAAGTCCAGGCCAAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 |
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| CDS TCA 90 bp | TTTGGAGTCTGGAATGTCTTCTATGAGCAGCCTGGGAAGGGCCACTaGTGCGGTGAACTGGTAGGTTGTTTTAGAAGTCTTTTCAAATGG | + |
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Preference number: 5 (lower is better) Translates to: FGVWNVFYEQPGKGH*CGELVGCFRSLFKW Trigger: CCATTTGAAAAGACTTCTAAAACAACCTACCAGTTCACCGCATCAGTGGCCCTTCCCAGGCTGCTCATAGAAGACATTCCAGACTCCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS TCA 90 bp | ACTTCGAGTCCTGAGAATTGTCTTCGATGGCACTTCCTTCCTTCATaGGTGCATCCTGTGTTTCTTTCAGGTCACATTCTGCCAGAACAT | + |
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Preference number: 5 (lower is better) Translates to: TSSPENCLRWHFLPS*VHPVFLSGHILPEH Trigger: ATGTTCTGGCAGAATGTGACCTGAAAGAAACACAGGATGCACTCATGAAGGAAGGAAGTGCCATCGAAGACAATTCTCAGGACTCGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS TCA 90 bp | ATGTTCAGCTGGCTTCCAAACTTTATGAATATTTCTCCCACACAGTaGGCTGGGCTCCATTCCTGTAGTCTGTCTCGTAGGTTATCTAGA | + |
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Preference number: 5 (lower is better) Translates to: MFSWLPNFMNISPTQ*AGLHSCSLSRRLSR Trigger: TCTAGATAACCTACGAGACAGACTACAGGAATGGAGCCCAGCTCACTGTGTGGGAGAAATATTCATAAAGTTTGGAAGCCAGCTGAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS GCA 90 bp | GTGTCAAACATAAACTGCCCTATCATGCGGCCACTGATGCTCTTCTaGAAGTTCTTGAAGAGTGGATTTAACGTTTTCCTCACTGACTTC | + |
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Preference number: 5 (lower is better) Translates to: VSNINCPIMRPLMLF*KFLKSGFNVFLTDF Trigger: GAAGTCAGTGAGGAAAACGTTAAATCCACTCTTCAAGAACTTGCAGAAGAGCATCAGTGGCCGCATGATAGGGCAGTTTATGTTTGACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS GCA 90 bp | CGAGTCCTGAGAATTGTCTTCGATGGCACTTCCTTCCTTCATGAGTaGATCCTGTGTTTCTTTCAGGTCACATTCTGCCAGAACATAATT | + |
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Preference number: 5 (lower is better) Translates to: RVLRIVFDGTSFLHE*ILCFFQVTFCQNII Trigger: AATTATGTTCTGGCAGAATGTGACCTGAAAGAAACACAGGATGCACTCATGAAGGAAGGAAGTGCCATCGAAGACAATTCTCAGGACTCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS TCA 90 bp | GAATCAGGTATCTGTTTGCTTCTGATAAAGTCGGACAGCCACAAATaGGTGTCTGTACATCGGACAGCTGCTCTCTCATCTTCAAGTTTT | + |
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Preference number: 5 (lower is better) Translates to: ESGICLLLIKSDSHK*VSVHRTAALSSSSF Trigger: AAAACTTGAAGATGAGAGAGCAGCTGTCCGATGTACAGACACTCATTTGTGGCTGTCCGACTTTATCAGAAGCAAACAGATACCTGATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS GCA 90 bp | GAAATGAAGCGTGGTAACACTGTTGAGAAATCCACTCTGGCCACCTaGTTCCTTTCTGAAAACCAGTCTTGGATGAACCTTAATTGTGAT | + |
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Preference number: 5 (lower is better) Translates to: EMKRGNTVEKSTLAT*FLSENQSWMNLNCD Trigger: ATCACAATTAAGGTTCATCCAAGACTGGTTTTCAGAAAGGAAGCAGGTGGCCAGAGTGGATTTCTCAACAGTGTTACCACGCTTCATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 |
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| CDS CCA 90 bp | TTAATAATAAAGGGTAGGAGTGACTTCCAGAGATATTGCTTCGCTTaGGCAAAGCATCTAAAGATGCCCGAAGAAACTGTCTCTCCAAGG | + |
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Preference number: 5 (lower is better) Translates to: LIIKGRSDFQRYCFA*AKHLKMPEETVSPR Trigger: CCTTGGAGAGACAGTTTCTTCGGGCATCTTTAGATGCTTTGCCCAAGCGAAGCAATATCTCTGGAAGTCACTCCTACCCTTTATTATTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS GCA 90 bp | TCCTTCCTTCATGAGTGCATCCTGTGTTTCTTTCAGGTCACATTCTaGCAGAACATAATTTCCTTCAAAATCCTTGTTCGTTTTACTAGA | + |
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Preference number: 5 (lower is better) Translates to: SFLHECILCFFQVTF*QNIISFKILVRFTR Trigger: TCTAGTAAAACGAACAAGGATTTTGAAGGAAATTATGTTCTGGCAGAATGTGACCTGAAAGAAACACAGGATGCACTCATGAAGGAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS TCA 72 bp | GGCTCTGTGCCTTCCGCCCTTGTAGAGCTCTGTCTGTaGGCTGAAGCAGGCCCTCCAATGTCACTCCGCTGT | + |
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Preference number: 6 (lower is better) Translates to: GSVPSALVELCL*AEAGPPMSLRC Trigger: ACAGCGGAGTGACATTGGAGGGCCTGCTTCAGCTCACAGACAGAGCTCTACAAGGGCGGAAGGCACAGAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS CCA 72 bp | TGGCTCTGTTTGAGGAGAGCGCTGCCCTCAGGGGCTTaGCGTACACGTCCTGCACAATTCGCAGCATCTGCA | + |
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Preference number: 6 (lower is better) Translates to: WLCLRRALPSGA*RTRPAQFAASA Trigger: TGCAGATGCTGCGAATTGTGCAGGACGTGTACGCCAAGCCCCTGAGGGCAGCGCTCTCCTCAAACAGAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS CAA 72 bp | ATGGCTCTGTTTGAGGAGAGCGCTGCCCTCAGGGGCTaGGCGTACACGTCCTGCACAATTCGCAGCATCTGC | + |
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Preference number: 6 (lower is better) Translates to: MALFEESAALRG*AYTSCTIRSIC Trigger: GCAGATGCTGCGAATTGTGCAGGACGTGTACGCCAAGCCCCTGAGGGCAGCGCTCTCCTCAAACAGAGCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS CAA 90 bp | AGAACCCTGTCCCGTCTCTCCATAGCTGAGGACCACCGGGCAGGCTaGTACTTTTTAGCAACCTGGAGCAGCGCGTTCCACTCAGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: RTLSRLSIAEDHRAG*YFLATWSSAFHSAK Trigger: CTTGGCTGAGTGGAACGCGCTGCTCCAGGTTGCTAAAAAGTACAAGCCTGCCCGGTGGTCCTCAGCTATGGAGAGACGGGACAGGGTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS TCA 72 bp | TGTGCCTTCCGCCCTTGTAGAGCTCTGTCTGTGAGCTaGAGCAGGCCCTCCAATGTCACTCCGCTGTGTTCG | + |
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Preference number: 6 (lower is better) Translates to: CAFRPCRALSVS*SRPSNVTPLCS Trigger: CGAACACAGCGGAGTGACATTGGAGGGCCTGCTTCAGCTCACAGACAGAGCTCTACAAGGGCGGAAGGCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS CAA 72 bp | TCCCGTCTCTCCATAGCTGAGGACCACCGGGCAGGCTaGTACTTTTTAGCAACCTGGAGCAGCGCGTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: SRLSIAEDHRAG*YFLATWSSAFH Trigger: GTGGAACGCGCTGCTCCAGGTTGCTAAAAAGTACAAGCCTGCCCGGTGGTCCTCAGCTATGGAGAGACGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS TCA 72 bp | GATGTGGATATTGGCAGCACTCAGAATGGCTCTGTTTaGGGAGAGCGCTGCCCTCAGGGGCTTGGCGTACAC | + |
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Preference number: 6 (lower is better) Translates to: DVDIGSTQNGSV*GERCPQGLGVH Trigger: GTGTACGCCAAGCCCCTGAGGGCAGCGCTCTCCTCAAACAGAGCCATTCTGAGTGCTGCCAATATCCACATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS TCA 72 bp | AGCAGCGCGTTCCACTCAGCCAAGGGGGTCGAGCTTTaGATAACTCCTTCTTGCGGAAGGCAATGTTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: SSAFHSAKGVEL*ITPSCGRQCSP Trigger: GGGAGAACATTGCCTTCCGCAAGAAGGAGTTATTCAAAGCTCGACCCCCTTGGCTGAGTGGAACGCGCTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS GCA 72 bp | ACAATTCGCAGCATCTGCACGTACCGTCTCTCGCTCTaGACAAGCTCCCTCACAACTTGGGCTCGTGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: TIRSICTYRLSL*TSSLTTWARVS Trigger: AGAGACACGAGCCCAAGTTGTGAGGGAGCTTGTGCAGAGCGAGAGACGGTACGTGCAGATGCTGCGAATTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS GCA 72 bp | AATTGCAGTGGTCAGGTCTCCACGGTCCACGTGTCCTaGCGGAGTATGGAGTCTCAGAGCATAGAGAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: NCSGQVSTVHVS*RSMESQSIEKV Trigger: CACCTTCTCTATGCTCTGAGACTCCATACTCCGGCAGGACACGTGGACCGTGGAGACCTGACCACTGCAATT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS CCA 72 bp | CAGCAGCAGCTTCCCTGGGTGTTAGCCAGTCCAAGCTaGACACACAGGCAATGTAGTGATGCTTCCAAGCTC | + |
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Preference number: 6 (lower is better) Translates to: QQQLPWVLASPS*THRQCSDASKL Trigger: GAGCTTGGAAGCATCACTACATTGCCTGTGTGTCCAGCTTGGACTGGCTAACACCCAGGGAAGCTGCTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS CCA 72 bp | CACTCCGCTGTGTTCGTACAGCACAGCCACGACGTCTaGCTTGATGCTCTCCATCACCATCTCATATGCAGG | + |
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Preference number: 6 (lower is better) Translates to: HSAVFVQHSHDV*LDALHHHLICR Trigger: CCTGCATATGAGATGGTGATGGAGAGCATCAAGCCAGACGTCGTGGCTGTGCTGTACGAACACAGCGGAGTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS CAA 72 bp | GAGCAGCGCGTTCCACTCAGCCAAGGGGGTCGAGCTTaGAATAACTCCTTCTTGCGGAAGGCAATGTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: EQRVPLSQGGRA*NNSFLRKAMFS Trigger: GGAGAACATTGCCTTCCGCAAGAAGGAGTTATTCAAAGCTCGACCCCCTTGGCTGAGTGGAACGCGCTGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS TCA 72 bp | CGCTGTGTTCGTACAGCACAGCCACGACGTCTGGCTTaGTGCTCTCCATCACCATCTCATATGCAGGAATCC | + |
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Preference number: 6 (lower is better) Translates to: RCVRTAQPRRLA*CSPSPSHMQES Trigger: GGATTCCTGCATATGAGATGGTGATGGAGAGCATCAAGCCAGACGTCGTGGCTGTGCTGTACGAACACAGCG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS CCA 72 bp | GCTCATTCAGTGTCCCATAAACAGCAGCAGCTTCCCTaGGTGTTAGCCAGTCCAAGCTGGACACACAGGCAA | + |
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Preference number: 6 (lower is better) Translates to: AHSVSHKQQQLP*VLASPSWTHRQ Trigger: TTGCCTGTGTGTCCAGCTTGGACTGGCTAACACCCAGGGAAGCTGCTGCTGTTTATGGGACACTGAATGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS CAA 72 bp | CCGCTGTGTTCGTACAGCACAGCCACGACGTCTGGCTaGATGCTCTCCATCACCATCTCATATGCAGGAATC | + |
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Preference number: 6 (lower is better) Translates to: PLCSYSTATTSG*MLSITISYAGI Trigger: GATTCCTGCATATGAGATGGTGATGGAGAGCATCAAGCCAGACGTCGTGGCTGTGCTGTACGAACACAGCGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS TCA 72 bp | CACAAGCTCCCTCACAACTTGGGCTCGTGTCTCTACTaGGTTCATCTGGAGCTTCCTCTCCAGCTTAACCAG | + |
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Preference number: 6 (lower is better) Translates to: HKLPHNLGSCLY*VHLELPLQLNQ Trigger: CTGGTTAAGCTGGAGAGGAAGCTCCAGATGAACTCAGTAGAGACACGAGCCCAAGTTGTGAGGGAGCTTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS CCA 72 bp | CTCGTCGCCTCTCCTGGAATTCCTCGTCCTCTGTTTTaGGCTCATTCAGTGTCCCATAAACAGCAGCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: LVASPGIPRPLF*AHSVSHKQQQL Trigger: AAGCTGCTGCTGTTTATGGGACACTGAATGAGCCCAAAACAGAGGACGAGGAATTCCAGGAGAGGCGACGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS CAA 90 bp | AGCAACCTGGAGCAGCGCGTTCCACTCAGCCAAGGGGGTCGAGCTTaGAATAACTCCTTCTTGCGGAAGGCAATGTTCTCCCAAATAATT | + |
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Preference number: 6 (lower is better) Translates to: SNLEQRVPLSQGGRA*NNSFLRKAMFSQII Trigger: AATTATTTGGGAGAACATTGCCTTCCGCAAGAAGGAGTTATTCAAAGCTCGACCCCCTTGGCTGAGTGGAACGCGCTGCTCCAGGTTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS TCA 72 bp | TCCTGTTCCGTTAGAAACTTCCAGGGCCAGCTGACTTaGGCGGCTGCACACAAGTCTTTCGGATTCAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: SCSVRNFQGQLT*AAAHKSFGFRK Trigger: CTTTCTGAATCCGAAAGACTTGTGTGCAGCCGCTCAAGTCAGCTGGCCCTGGAAGTTTCTAACGGAACAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 |
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| CDS TCA 72 bp | AGCAATCCTGTTCCGTTAGAAACTTCCAGGGCCAGCTaGCTTGAGCGGCTGCACACAAGTCTTTCGGATTCA | + |
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Preference number: 6 (lower is better) Translates to: SNPVPLETSRAS*LERLHTSLSDS Trigger: TGAATCCGAAAGACTTGTGTGCAGCCGCTCAAGTCAGCTGGCCCTGGAAGTTTCTAACGGAACAGGATTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 |
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| CDS TCA 72 bp | GGACAAAAATTCCAGAGGTTTGTCAGACCCTTCTTTTaGCAGCTCCATCAGTCCATCCGCCAGAGCCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: GQKFQRFVRPFF*QLHQSIRQSLC Trigger: GCACAGGCTCTGGCGGATGGACTGATGGAGCTGTCAAAAGAAGGGTCTGACAAACCTCTGGAATTTTTGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS CCA 72 bp | TGGTTCTTAAAAGGTGTCCAGGCGCTGAACCGAGTGTaGAAACTTTCCACTTCCACACTTTCCAGGGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: WFLKGVQALNRV*KLSTSTLSRGR Trigger: CCTTCCCCTGGAAAGTGTGGAAGTGGAAAGTTTCCACACTCGGTTCAGCGCCTGGACACCTTTTAAGAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS CCA 72 bp | CTCACAACTTGGGCTCGTGTCTCTACTGAGTTCATCTaGAGCTTCCTCTCCAGCTTAACCAGAACCTCCACA | + |
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Preference number: 6 (lower is better) Translates to: LTTWARVSTEFI*SFLSSLTRTST Trigger: TGTGGAGGTTCTGGTTAAGCTGGAGAGGAAGCTCCAGATGAACTCAGTAGAGACACGAGCCCAAGTTGTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS CAA 72 bp | CCAGAACCTCCACATTCAGGTTGCTTTGGCCTGGACTaGACTTCGAGTCCTGAGAATTGTCTTCGATGGCAC | + |
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Preference number: 6 (lower is better) Translates to: PEPPHSGCFGLD*TSSPENCLRWH Trigger: GTGCCATCGAAGACAATTCTCAGGACTCGAAGTCAAGTCCAGGCCAAAGCAACCTGAATGTGGAGGTTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS CAA 90 bp | GCAGAAAATAGGACAAAAATTCCAGAGGTTTGTCAGACCCTTCTTTaGACAGCTCCATCAGTCCATCCGCCAGAGCCTGTGCAGGGCCTT | + |
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Preference number: 6 (lower is better) Translates to: AENRTKIPEVCQTLL*TAPSVHPPEPVQGL Trigger: AAGGCCCTGCACAGGCTCTGGCGGATGGACTGATGGAGCTGTCAAAAGAAGGGTCTGACAAACCTCTGGAATTTTTGTCCTATTTTCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS TCA 72 bp | CAGAACCTCCACATTCAGGTTGCTTTGGCCTGGACTTaGCTTCGAGTCCTGAGAATTGTCTTCGATGGCACT | + |
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Preference number: 6 (lower is better) Translates to: QNLHIQVALAWT*LRVLRIVFDGT Trigger: AGTGCCATCGAAGACAATTCTCAGGACTCGAAGTCAAGTCCAGGCCAAAGCAACCTGAATGTGGAGGTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS CAA 72 bp | AGGACAAAAATTCCAGAGGTTTGTCAGACCCTTCTTTaGACAGCTCCATCAGTCCATCCGCCAGAGCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: RTKIPEVCQTLL*TAPSVHPPEPV Trigger: CACAGGCTCTGGCGGATGGACTGATGGAGCTGTCAAAAGAAGGGTCTGACAAACCTCTGGAATTTTTGTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS TCA 72 bp | TGGAATGTCTTCTATGAGCAGCCTGGGAAGGGCCACTaGTGCGGTGAACTGGTAGGTTGTTTTAGAAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: WNVFYEQPGKGH*CGELVGCFRSL Trigger: AAGACTTCTAAAACAACCTACCAGTTCACCGCATCAGTGGCCCTTCCCAGGCTGCTCATAGAAGACATTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS TCA 72 bp | TTCAGGTTGCTTTGGCCTGGACTTGACTTCGAGTCCTaGGAATTGTCTTCGATGGCACTTCCTTCCTTCATG | + |
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Preference number: 6 (lower is better) Translates to: FRLLWPGLDFES*ELSSMALPSFM Trigger: CATGAAGGAAGGAAGTGCCATCGAAGACAATTCTCAGGACTCGAAGTCAAGTCCAGGCCAAAGCAACCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS CCA 72 bp | CCATCTCATATGCAGGAATCCGCGATGATATCAGGATaGCATGTAGTGGCAAAGCATCAGTTCTACCAACCC | + |
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Preference number: 6 (lower is better) Translates to: PSHMQESAMISG*HVVAKHQFYQP Trigger: GGGTTGGTAGAACTGATGCTTTGCCACTACATGCCATCCTGATATCATCGCGGATTCCTGCATATGAGATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS CCA 72 bp | CTGGACTTGACTTCGAGTCCTGAGAATTGTCTTCGATaGCACTTCCTTCAGACCCTTCTTTTGACAGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: LDLTSSPENCLR*HFLQTLLLTAP Trigger: TGGAGCTGTCAAAAGAAGGGTCTGAAGGAAGTGCCATCGAAGACAATTCTCAGGACTCGAAGTCAAGTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 |
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| CDS CCA 72 bp | TTCGGCATCCATAAGCAATCCTGTCTGTTTAAGGACTaGTTCTTAAAAGGTGTCCAGGCGCTGAACCGAGTG | + |
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Preference number: 6 (lower is better) Translates to: FGIHKQSCLFKD*FLKGVQALNRV Trigger: CACTCGGTTCAGCGCCTGGACACCTTTTAAGAACCAGTCCTTAAACAGACAGGATTGCTTATGGATGCCGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209178.2 |
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| CDS CAA 72 bp | CTGATTGCATGCTGGAGTACTGACAGCCAAAGGAATTaGTCATCTGACACCTCGGTAGCGCAGATCCATTCT | + |
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Preference number: 6 (lower is better) Translates to: LIACWSTDSQRN*SSDTSVAQIHS Trigger: AGAATGGATCTGCGCTACCGAGGTGTCAGATGACAAATTCCTTTGGCTGTCAGTACTCCAGCATGCAATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS GCA 72 bp | CGTGGTAACACTGTTGAGAAATCCACTCTGGCCACCTaGTTCCTTTCTGAAAACCAGTCTTGGATGAACCTT | + |
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Preference number: 6 (lower is better) Translates to: RGNTVEKSTLAT*FLSENQSWMNL Trigger: AAGGTTCATCCAAGACTGGTTTTCAGAAAGGAAGCAGGTGGCCAGAGTGGATTTCTCAACAGTGTTACCACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 |
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| CDS GCA 72 bp | CAAGGTGTCTTCCAGGAATTCTGTGAAACTGGACCATaGCTGCAGCTTAGACTCGCTGAAGTAGTTAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: QGVFQEFCETGP*LQLRLAEVVRK Trigger: CTTTCTAACTACTTCAGCGAGTCTAAGCTGCAGGCATGGTCCAGTTTCACAGAATTCCTGGAAGACACCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS CAA 90 bp | ATACTGCTTCTGATTGCATGCTGGAGTACTGACAGCCAAAGGAATTaGTCATCTGACACCTCGGTAGCGCAGATCCATTCTCGTTTTGAA | + |
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Preference number: 6 (lower is better) Translates to: ILLLIACWSTDSQRN*SSDTSVAQIHSRFE Trigger: TTCAAAACGAGAATGGATCTGCGCTACCGAGGTGTCAGATGACAAATTCCTTTGGCTGTCAGTACTCCAGCATGCAATCAGAAGCAGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS TCA 72 bp | ATCTGTTTGCTTCTGATAAAGTCGGACAGCCACAAATaGGTGTCTGTACATCGGACAGCTGCTCTCTCATCT | + |
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Preference number: 6 (lower is better) Translates to: ICLLLIKSDSHK*VSVHRTAALSS Trigger: AGATGAGAGAGCAGCTGTCCGATGTACAGACACTCATTTGTGGCTGTCCGACTTTATCAGAAGCAAACAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS GCA 72 bp | AGAATTGTCTTCGATGGCACTTCCTTCCTTCATGAGTaGATCCTGTGTTTCTTTCAGGTCACATTCTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: RIVFDGTSFLHE*ILCFFQVTFCQ Trigger: CTGGCAGAATGTGACCTGAAAGAAACACAGGATGCACTCATGAAGGAAGGAAGTGCCATCGAAGACAATTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS CAA 72 bp | CTCAGCCAAGGGGGTCGAGCTTTGAATAACTCCTTCTaGCGGAAGGCAATGTTCTCCCAAATAATTTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: LSQGGRALNNSF*RKAMFSQIIFL Trigger: GAGAAAAATTATTTGGGAGAACATTGCCTTCCGCAAGAAGGAGTTATTCAAAGCTCGACCCCCTTGGCTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS CAA 72 bp | CCTATCATGCGGCCACTGATGCTCTTCTGCAAGTTCTaGAAGAGTGGATTTAACGTTTTCCTCACTGACTTC | + |
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Preference number: 6 (lower is better) Translates to: PIMRPLMLFCKF*KSGFNVFLTDF Trigger: GAAGTCAGTGAGGAAAACGTTAAATCCACTCTTCAAGAACTTGCAGAAGAGCATCAGTGGCCGCATGATAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS CAA 90 bp | ATAAACTGCCCTATCATGCGGCCACTGATGCTCTTCTGCAAGTTCTaGAAGAGTGGATTTAACGTTTTCCTCACTGACTTCAAGGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: INCPIMRPLMLFCKF*KSGFNVFLTDFKVS Trigger: AGACACCTTGAAGTCAGTGAGGAAAACGTTAAATCCACTCTTCAAGAACTTGCAGAAGAGCATCAGTGGCCGCATGATAGGGCAGTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS GCA 72 bp | ATAAACTGCCCTATCATGCGGCCACTGATGCTCTTCTaGAAGTTCTTGAAGAGTGGATTTAACGTTTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: INCPIMRPLMLF*KFLKSGFNVFL Trigger: GAGGAAAACGTTAAATCCACTCTTCAAGAACTTGCAGAAGAGCATCAGTGGCCGCATGATAGGGCAGTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS CCA 72 bp | TCGAAGAATAAATGCATTCTTGATGTATTTGGAGTCTaGAATGTCTTCTATGAGCAGCCTGGGAAGGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: SKNKCILDVFGV*NVFYEQPGKGH Trigger: GTGGCCCTTCCCAGGCTGCTCATAGAAGACATTCCAGACTCCAAATACATCAAGAATGCATTTATTCTTCGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS CAA 90 bp | GCGCAGATCCATTCTCGTTTTGAACCTCGAAGAATAAATGCATTCTaGATGTATTTGGAGTCTGGAATGTCTTCTATGAGCAGCCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: AQIHSRFEPRRINAF*MYLESGMSSMSSLG Trigger: TCCCAGGCTGCTCATAGAAGACATTCCAGACTCCAAATACATCAAGAATGCATTTATTCTTCGAGGTTCAAAACGAGAATGGATCTGCGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS GCA 72 bp | TTAATAATAAAGGGTAGGAGTGACTTCCAGAGATATTaGTTCGCTTGGGCAAAGCATCTAAAGATGCCCGAA | + |
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Preference number: 6 (lower is better) Translates to: LIIKGRSDFQRY*FAWAKHLKMPE Trigger: TTCGGGCATCTTTAGATGCTTTGCCCAAGCGAAGCAATATCTCTGGAAGTCACTCCTACCCTTTATTATTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS CCA 72 bp | GGTGAACTGGTAGGTTGTTTTAGAAGTCTTTTCAAATaGAGTATGAGATGTACTCCGACTGCTAACAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: GELVGCFRSLFK*SMRCTPTANKE Trigger: CTCCTTGTTAGCAGTCGGAGTACATCTCATACTCCATTTGAAAAGACTTCTAAAACAACCTACCAGTTCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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| CDS CAA 72 bp | TTTGAACCTCGAAGAATAAATGCATTCTTGATGTATTaGGAGTCTGGAATGTCTTCTATGAGCAGCCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: FEPRRINAFLMY*ESGMSSMSSLG Trigger: TCCCAGGCTGCTCATAGAAGACATTCCAGACTCCAAATACATCAAGAATGCATTTATTCTTCGAGGTTCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095817.5 ENSMUST00000207827.2 ENSMUST00000208948.2 ENSMUST00000209178.2 |
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