Pregenerated sensors for ECSIT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066839Ensembl transcript IDs: ENSMUST00000098937.10, ENSMUST00000177967.2, ENSMUST00000179422.8, ENSMUST00000180180.8
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTCTGCGCTGGGCATGACCCCGTGTCGTTCCATCTGCTCCAGGACTaGGACCCCACATTCCTGCTGCCGTGGGTAGTGGACGAAGATGCG | + |
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Preference number: 5 (lower is better) Translates to: LCAGHDPVSFHLLQD*DPTFLLPWVVDEDA Trigger: CGCATCTTCGTCCACTACCCACGGCAGCAGGAATGTGGGGTCGCAGTCCTGGAGCAGATGGAACGACACGGGGTCATGCCCAGCGCAGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098937.10 ENSMUST00000177967.2 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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| CDS CCA 90 bp | GAGGGGACTGTCCCTCCAGCCTTGAAGTTGTCAGGAGCTCCCCCGTaGACCTGGCCAGGCGGAATACCACTGGGATCTGTGCCAGGGTTG | + |
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Preference number: 5 (lower is better) Translates to: EGTVPPALKLSGAPP*TWPGGIPLGSVPGL Trigger: CAACCCTGGCACAGATCCCAGTGGTATTCCGCCTGGCCAGGTCCACGGGGGAGCTCCTGACAACTTCAAGGCTGGAGGGACAGTCCCCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098937.10 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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| CDS CCA 90 bp | ACTGTCCCTCCAGCCTTGAAGTTGTCAGGAGCTCCCCCGTGGACCTaGCCAGGCGGAATACCACTGGGATCTGTGCCAGGGTTGGGTTGG | + |
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Preference number: 5 (lower is better) Translates to: TVPPALKLSGAPPWT*PGGIPLGSVPGLGW Trigger: CCAACCCAACCCTGGCACAGATCCCAGTGGTATTCCGCCTGGCCAGGTCCACGGGGGAGCTCCTGACAACTTCAAGGCTGGAGGGACAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098937.10 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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| CDS TCA 90 bp | CCCGCTCCACACCAAACTCTGGCATCTTGCGCAGTGCTAGGTAGATaGAGTCCACGTGGCCGCGCTTGCGCACATTGTGCGCCCCAAAGC | + |
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Preference number: 5 (lower is better) Translates to: PAPHQTLASCAVLGR*SPRGRACAHCAPQS Trigger: GCTTTGGGGCGCACAATGTGCGCAAGCGCGGCCACGTGGACTTCATCTACCTAGCACTGCGCAAGATGCCAGAGTTTGGTGTGGAGCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098937.10 ENSMUST00000177967.2 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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| CDS GCA 90 bp | GAGCTCCCCCGTGGACCTGGCCAGGCGGAATACCACTGGGATCTGTaGCAGGGTTGGGTTGGTCTCCTGCAAGCCTTGGATCCACTTGAT | + |
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Preference number: 5 (lower is better) Translates to: ELPRGPGQAEYHWDL*QGWVGLLQALDPLD Trigger: ATCAAGTGGATCCAAGGCTTGCAGGAGACCAACCCAACCCTGGCACAGATCCCAGTGGTATTCCGCCTGGCCAGGTCCACGGGGGAGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098937.10 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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| CDS CCA 90 bp | TCGTTCCATCTGCTCCAGGACTGCGACCCCACATTCCTGCTGCCGTaGGTAGTGGACGAAGATGCGCTGGATAACGTTGCGGGGCCGGAA | + |
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Preference number: 5 (lower is better) Translates to: SFHLLQDCDPTFLLP*VVDEDALDNVAGPE Trigger: TTCCGGCCCCGCAACGTTATCCAGCGCATCTTCGTCCACTACCCACGGCAGCAGGAATGTGGGGTCGCAGTCCTGGAGCAGATGGAACGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098937.10 ENSMUST00000177967.2 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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| CDS CCA 90 bp | AGTTGTCAGGAGCTCCCCCGTGGACCTGGCCAGGCGGAATACCACTaGGATCTGTGCCAGGGTTGGGTTGGTCTCCTGCAAGCCTTGGAT | + |
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Preference number: 5 (lower is better) Translates to: SCQELPRGPGQAEYH*DLCQGWVGLLQALD Trigger: ATCCAAGGCTTGCAGGAGACCAACCCAACCCTGGCACAGATCCCAGTGGTATTCCGCCTGGCCAGGTCCACGGGGGAGCTCCTGACAACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098937.10 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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| CDS CCA 90 bp | ACGAAGCCAGAGAGGGAAGGGGCCCTCAACAAAAACAGGCCTGGATaGGTTGTGGCGGGCCAGGGCAGCTTGCTGATCTGGACTCTGGAT | + |
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Preference number: 5 (lower is better) Translates to: TKPEREGALNKNRPG*VVAGQGSLLIWTLD Trigger: ATCCAGAGTCCAGATCAGCAAGCTGCCCTGGCCCGCCACAACCCATCCAGGCCTGTTTTTGTTGAGGGCCCCTTCCCTCTCTGGCTTCGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098937.10 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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| CDS GCA 90 bp | GCCTTGTCCCGCTCCCTGTTTCCTGATGGCTTGAACGAGTCTTCATaGATTGCTGGAACCTTGATGGGCTTCCTCTGGGGCTCCGGGGGT | + |
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Preference number: 5 (lower is better) Translates to: ALSRSLFPDGLNESS*IAGTLMGFLWGSGG Trigger: ACCCCCGGAGCCCCAGAGGAAGCCCATCAAGGTTCCAGCAATGCATGAAGACTCGTTCAAGCCATCAGGAAACAGGGAGCGGGACAAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098937.10 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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| CDS CCA 90 bp | TATTACGAAGCCAGAGAGGGAAGGGGCCCTCAACAAAAACAGGCCTaGATGGGTTGTGGCGGGCCAGGGCAGCTTGCTGATCTGGACTCT | + |
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Preference number: 5 (lower is better) Translates to: YYEAREGRGPQQKQA*MGCGGPGQLADLDS Trigger: AGAGTCCAGATCAGCAAGCTGCCCTGGCCCGCCACAACCCATCCAGGCCTGTTTTTGTTGAGGGCCCCTTCCCTCTCTGGCTTCGTAATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098937.10 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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| CDS CCA 90 bp | CGTGGACCTGGCCAGGCGGAATACCACTGGGATCTGTGCCAGGGTTaGGTTGGTCTCCTGCAAGCCTTGGATCCACTTGATCAATGTTGC | + |
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Preference number: 5 (lower is better) Translates to: RGPGQAEYHWDLCQG*VGLLQALDPLDQCC Trigger: GCAACATTGATCAAGTGGATCCAAGGCTTGCAGGAGACCAACCCAACCCTGGCACAGATCCCAGTGGTATTCCGCCTGGCCAGGTCCACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098937.10 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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| CDS GCA 90 bp | GGTTGGGTTGGTCTCCTGCAAGCCTTGGATCCACTTGATCAATGTTaGCTGATCATGGGCACCAGCCATGCACATGGCGAAGACAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: GWVGLLQALDPLDQC*LIMGTSHAHGEDRA Trigger: GGCCCTGTCTTCGCCATGTGCATGGCTGGTGCCCATGATCAGGCAACATTGATCAAGTGGATCCAAGGCTTGCAGGAGACCAACCCAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098937.10 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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| CDS TCA 90 bp | GCGCACTGCGTTCAGGAAGCTTGCCTTGTCCCGCTCCCTGTTTCCTaGTGGCTTGAACGAGTCTTCATGCATTGCTGGAACCTTGATGGG | + |
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Preference number: 5 (lower is better) Translates to: AHCVQEACLVPLPVS*WLERVFMHCWNLDG Trigger: CCCATCAAGGTTCCAGCAATGCATGAAGACTCGTTCAAGCCATCAGGAAACAGGGAGCGGGACAAGGCAAGCTTCCTGAACGCAGTGCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098937.10 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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| CDS TCA 90 bp | CCGGAAGACCTCCTTGGGGAAAACATCCAGCAGCAGGTTGTATACTaGCAAGTCCCGCTCCACACCAAACTCTGGCATCTTGCGCAGTGC | + |
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Preference number: 5 (lower is better) Translates to: PEDLLGENIQQQVVY*QVPLHTKLWHLAQC Trigger: GCACTGCGCAAGATGCCAGAGTTTGGTGTGGAGCGGGACTTGTCAGTATACAACCTGCTGCTGGATGTTTTCCCCAAGGAGGTCTTCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098937.10 ENSMUST00000177967.2 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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| CDS TCA 90 bp | GGGTTGGTCTCCTGCAAGCCTTGGATCCACTTGATCAATGTTGCCTaGTCATGGGCACCAGCCATGCACATGGCGAAGACAGGGCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: GLVSCKPWIHLINVA*SWAPAMHMAKTGPS Trigger: AGAAGGCCCTGTCTTCGCCATGTGCATGGCTGGTGCCCATGATCAGGCAACATTGATCAAGTGGATCCAAGGCTTGCAGGAGACCAACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098937.10 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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| CDS TCA 90 bp | TCTGTGCCAGGGTTGGGTTGGTCTCCTGCAAGCCTTGGATCCACTTaGTCAATGTTGCCTGATCATGGGCACCAGCCATGCACATGGCGA | + |
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Preference number: 5 (lower is better) Translates to: SVPGLGWSPASLGST*SMLPDHGHQPCTWR Trigger: TCGCCATGTGCATGGCTGGTGCCCATGATCAGGCAACATTGATCAAGTGGATCCAAGGCTTGCAGGAGACCAACCCAACCCTGGCACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098937.10 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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| CDS CCA 90 bp | CAGCTTGCTGATCTGGACTCTGGATTCCTACAATGTGAGGCTGTGTaGGATCTTCCATGCCTGTCGAGTCACTGGGCAAAGACATCTGGT | + |
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Preference number: 5 (lower is better) Translates to: QLADLDSGFLQCEAV*DLPCLSSHWAKTSG Trigger: ACCAGATGTCTTTGCCCAGTGACTCGACAGGCATGGAAGATCCCACACAGCCTCACATTGTAGGAATCCAGAGTCCAGATCAGCAAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098937.10 ENSMUST00000177967.2 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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| CDS TCA 90 bp | TGTCACTTCATCCACGTCAAACTCATAGTCGTCCCAACCACTCCTTaGATATTCCAGGTCCAGCTTCTGTGGGTAGTACAGCTCCCATTC | + |
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Preference number: 5 (lower is better) Translates to: CHFIHVKLIVVPTTP*IFQVQLLWVVQLPF Trigger: GAATGGGAGCTGTACTACCCACAGAAGCTGGACCTGGAATATTCAAGGAGTGGTTGGGACGACTATGAGTTTGACGTGGATGAAGTGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098937.10 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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| CDS GCA 72 bp | GGGCATGACCCCGTGTCGTTCCATCTGCTCCAGGACTaGGACCCCACATTCCTGCTGCCGTGGGTAGTGGAC | + |
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Preference number: 6 (lower is better) Translates to: GHDPVSFHLLQD*DPTFLLPWVVD Trigger: GTCCACTACCCACGGCAGCAGGAATGTGGGGTCGCAGTCCTGGAGCAGATGGAACGACACGGGGTCATGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098937.10 ENSMUST00000177967.2 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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| CDS GCA 72 bp | GTCTCTGCGCTGGGCATGACCCCGTGTCGTTCCATCTaGTCCAGGACTGCGACCCCACATTCCTGCTGCCGT | + |
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Preference number: 6 (lower is better) Translates to: VSALGMTPCRSI*SRTATPHSCCR Trigger: ACGGCAGCAGGAATGTGGGGTCGCAGTCCTGGAGCAGATGGAACGACACGGGGTCATGCCCAGCGCAGAGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098937.10 ENSMUST00000177967.2 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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| CDS CCA 72 bp | GAGCTCCCCCGTGGACCTGGCCAGGCGGAATACCACTaGGATCTGTGCCAGGGTTGGGTTGGTCTCCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: ELPRGPGQAEYH*DLCQGWVGLLQ Trigger: TTGCAGGAGACCAACCCAACCCTGGCACAGATCCCAGTGGTATTCCGCCTGGCCAGGTCCACGGGGGAGCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098937.10 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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| CDS GCA 72 bp | GCGCTTGCGCACATTGTGCGCCCCAAAGCTGCGCACTaGGTTCAGGAAGCTTGCCTTGTCCCGCTCCCTGTT | + |
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Preference number: 6 (lower is better) Translates to: ALAHIVRPKAAH*VQEACLVPLPV Trigger: AACAGGGAGCGGGACAAGGCAAGCTTCCTGAACGCAGTGCGCAGCTTTGGGGCGCACAATGTGCGCAAGCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098937.10 ENSMUST00000177967.2 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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| CDS CCA 72 bp | GAGAGGGAAGGGGCCCTCAACAAAAACAGGCCTGGATaGGTTGTGGCGGGCCAGGGCAGCTTGCTGATCTGG | + |
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Preference number: 6 (lower is better) Translates to: EREGALNKNRPG*VVAGQGSLLIW Trigger: CCAGATCAGCAAGCTGCCCTGGCCCGCCACAACCCATCCAGGCCTGTTTTTGTTGAGGGCCCCTTCCCTCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000098937.10 ENSMUST00000177967.2 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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| CDS CCA 72 bp | GTCCCTCCAGCCTTGAAGTTGTCAGGAGCTCCCCCGTaGACCTGGCCAGGCGGAATACCACTGGGATCTGTG | + |
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Preference number: 6 (lower is better) Translates to: VPPALKLSGAPP*TWPGGIPLGSV Trigger: CACAGATCCCAGTGGTATTCCGCCTGGCCAGGTCCACGGGGGAGCTCCTGACAACTTCAAGGCTGGAGGGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098937.10 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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| CDS CCA 72 bp | CTGCTCCAGGACTGCGACCCCACATTCCTGCTGCCGTaGGTAGTGGACGAAGATGCGCTGGATAACGTTGCG | + |
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Preference number: 6 (lower is better) Translates to: LLQDCDPTFLLP*VVDEDALDNVA Trigger: CGCAACGTTATCCAGCGCATCTTCGTCCACTACCCACGGCAGCAGGAATGTGGGGTCGCAGTCCTGGAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098937.10 ENSMUST00000177967.2 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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| CDS CCA 72 bp | GTCTCATCATCTTCCTCAGGCCCCTTGGGAGGACTGTaGGGAGGGGACTGTCCCTCCAGCCTTGAAGTTGTC | + |
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Preference number: 6 (lower is better) Translates to: VSSSSSGPLGGL*GGDCPSSLEVV Trigger: GACAACTTCAAGGCTGGAGGGACAGTCCCCTCCCCACAGTCCTCCCAAGGGGCCTGAGGAAGATGATGAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098937.10 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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| CDS TCA 72 bp | CACCAAACTCTGGCATCTTGCGCAGTGCTAGGTAGATaGAGTCCACGTGGCCGCGCTTGCGCACATTGTGCG | + |
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Preference number: 6 (lower is better) Translates to: HQTLASCAVLGR*SPRGRACAHCA Trigger: CGCACAATGTGCGCAAGCGCGGCCACGTGGACTTCATCTACCTAGCACTGCGCAAGATGCCAGAGTTTGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098937.10 ENSMUST00000177967.2 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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| CDS CAA 72 bp | GATGGCTTGAACGAGTCTTCATGCATTGCTGGAACCTaGATGGGCTTCCTCTGGGGCTCCGGGGGTCGAGGA | + |
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Preference number: 6 (lower is better) Translates to: DGLNESSCIAGT*MGFLWGSGGRG Trigger: TCCTCGACCCCCGGAGCCCCAGAGGAAGCCCATCAAGGTTCCAGCAATGCATGAAGACTCGTTCAAGCCATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098937.10 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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| CDS CAA 90 bp | CTGTTTCCTGATGGCTTGAACGAGTCTTCATGCATTGCTGGAACCTaGATGGGCTTCCTCTGGGGCTCCGGGGGTCGAGGAACCAACCAC | + |
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Preference number: 6 (lower is better) Translates to: LFPDGLNESSCIAGT*MGFLWGSGGRGTNH Trigger: GTGGTTGGTTCCTCGACCCCCGGAGCCCCAGAGGAAGCCCATCAAGGTTCCAGCAATGCATGAAGACTCGTTCAAGCCATCAGGAAACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098937.10 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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| CDS TCA 72 bp | GGGTTGGGTTGGTCTCCTGCAAGCCTTGGATCCACTTaGTCAATGTTGCCTGATCATGGGCACCAGCCATGC | + |
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Preference number: 6 (lower is better) Translates to: GLGWSPASLGST*SMLPDHGHQPC Trigger: GCATGGCTGGTGCCCATGATCAGGCAACATTGATCAAGTGGATCCAAGGCTTGCAGGAGACCAACCCAACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098937.10 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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| CDS CAA 90 bp | GCGTTCAGGAAGCTTGCCTTGTCCCGCTCCCTGTTTCCTGATGGCTaGAACGAGTCTTCATGCATTGCTGGAACCTTGATGGGCTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: AFRKLALSRSLFPDG*NESSCIAGTLMGFL Trigger: GAGGAAGCCCATCAAGGTTCCAGCAATGCATGAAGACTCGTTCAAGCCATCAGGAAACAGGGAGCGGGACAAGGCAAGCTTCCTGAACGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098937.10 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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| CDS CAA 90 bp | TACCACTGGGATCTGTGCCAGGGTTGGGTTGGTCTCCTGCAAGCCTaGGATCCACTTGATCAATGTTGCCTGATCATGGGCACCAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: YHWDLCQGWVGLLQA*DPLDQCCLIMGTSH Trigger: ATGGCTGGTGCCCATGATCAGGCAACATTGATCAAGTGGATCCAAGGCTTGCAGGAGACCAACCCAACCCTGGCACAGATCCCAGTGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098937.10 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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| CDS GCA 72 bp | GGTCTCCTGCAAGCCTTGGATCCACTTGATCAATGTTaGCTGATCATGGGCACCAGCCATGCACATGGCGAA | + |
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Preference number: 6 (lower is better) Translates to: GLLQALDPLDQC*LIMGTSHAHGE Trigger: TTCGCCATGTGCATGGCTGGTGCCCATGATCAGGCAACATTGATCAAGTGGATCCAAGGCTTGCAGGAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098937.10 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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| CDS CAA 72 bp | GATCTGTGCCAGGGTTGGGTTGGTCTCCTGCAAGCCTaGGATCCACTTGATCAATGTTGCCTGATCATGGGC | + |
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Preference number: 6 (lower is better) Translates to: DLCQGWVGLLQA*DPLDQCCLIMG Trigger: GCCCATGATCAGGCAACATTGATCAAGTGGATCCAAGGCTTGCAGGAGACCAACCCAACCCTGGCACAGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098937.10 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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| CDS CAA 72 bp | AGGCGGAATACCACTGGGATCTGTGCCAGGGTTGGGTaGGTCTCCTGCAAGCCTTGGATCCACTTGATCAAT | + |
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Preference number: 6 (lower is better) Translates to: RRNTTGICARVG*VSCKPWIHLIN Trigger: ATTGATCAAGTGGATCCAAGGCTTGCAGGAGACCAACCCAACCCTGGCACAGATCCCAGTGGTATTCCGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098937.10 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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| CDS TCA 72 bp | GTTCAGGAAGCTTGCCTTGTCCCGCTCCCTGTTTCCTaGTGGCTTGAACGAGTCTTCATGCATTGCTGGAAC | + |
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Preference number: 6 (lower is better) Translates to: VQEACLVPLPVS*WLERVFMHCWN Trigger: GTTCCAGCAATGCATGAAGACTCGTTCAAGCCATCAGGAAACAGGGAGCGGGACAAGGCAAGCTTCCTGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098937.10 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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| CDS CCA 72 bp | GATCTGGACTCTGGATTCCTACAATGTGAGGCTGTGTaGGATCTTCCATGCCTGTCGAGTCACTGGGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: DLDSGFLQCEAV*DLPCLSSHWAK Trigger: CTTTGCCCAGTGACTCGACAGGCATGGAAGATCCCACACAGCCTCACATTGTAGGAATCCAGAGTCCAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098937.10 ENSMUST00000177967.2 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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| CDS CAA 72 bp | CGGAAGACCTCCTTGGGGAAAACATCCAGCAGCAGGTaGTATACTGACAAGTCCCGCTCCACACCAAACTCT | + |
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Preference number: 6 (lower is better) Translates to: RKTSLGKTSSSR*YTDKSRSTPNS Trigger: AGAGTTTGGTGTGGAGCGGGACTTGTCAGTATACAACCTGCTGCTGGATGTTTTCCCCAAGGAGGTCTTCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000098937.10 ENSMUST00000177967.2 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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| CDS CAA 90 bp | CTGTCACTTCATCCACGTCAAACTCATAGTCGTCCCAACCACTCCTaGAATATTCCAGGTCCAGCTTCTGTGGGTAGTACAGCTCCCATT | + |
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Preference number: 6 (lower is better) Translates to: LSLHPRQTHSRPNHS*NIPGPASVGSTAPI Trigger: AATGGGAGCTGTACTACCCACAGAAGCTGGACCTGGAATATTCAAGGAGTGGTTGGGACGACTATGAGTTTGACGTGGATGAAGTGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098937.10 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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| CDS CAA 72 bp | CATCCACGTCAAACTCATAGTCGTCCCAACCACTCCTaGAATATTCCAGGTCCAGCTTCTGTGGGTAGTACA | + |
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Preference number: 6 (lower is better) Translates to: HPRQTHSRPNHS*NIPGPASVGST Trigger: TGTACTACCCACAGAAGCTGGACCTGGAATATTCAAGGAGTGGTTGGGACGACTATGAGTTTGACGTGGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098937.10 ENSMUST00000179422.8 ENSMUST00000180180.8 |
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