Pregenerated sensors for ECSCR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073599Ensembl transcript IDs: ENSMUST00000097618.10, ENSMUST00000123973.2, ENSMUST00000133064.8, ENSMUST00000134656.8, ENSMUST00000235163.2
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGTCTCCTCTCCTTCCTCATGGCCAGGGGACAGCCGCATCACACGTaGACCCATGGCGACTCCAGGTCACTCTTAAAGAATCTTCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: RLLSFLMARGQPHHT*THGDSRSLLKNLLC Trigger: GCAGAGAAGATTCTTTAAGAGTGACCTGGAGTCGCCATGGGTCCACGTGTGATGCGGCTGTCCCCTGGCCATGAGGAAGGAGAGGAGACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235163.2 |
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| 3UTR CCA 90 bp | GCAGGAGGAGGGGGAGCAGGCCAAGTGTCTAGCATGGCTTCCAAGTaGGAAGGAGTCTCTTGTGTGGTAGGTTCTTCTGGATCTAGAGGA | + |
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Preference number: 1 (lower is better) Translates to: AGGGGAGQVSSMASK*EGVSCVVGSSGSRG Trigger: TCCTCTAGATCCAGAAGAACCTACCACACAAGAGACTCCTTCCCACTTGGAAGCCATGCTAGACACTTGGCCTGCTCCCCCTCCTCCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000235163.2 |
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| 3UTR GCA 90 bp | GAACTGGGAGCAGGCATGACATCAAATAATTTATGTGTGGTCCGCTaGCTCCCCCAATCTCGTCTCCTCTCCTTCCTCATGGCCAGGGGA | + |
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Preference number: 1 (lower is better) Translates to: ELGAGMTSNNLCVVR*LPQSRLLSFLMARG Trigger: TCCCCTGGCCATGAGGAAGGAGAGGAGACGAGATTGGGGGAGGCAGCGGACCACACATAAATTATTTGATGTCATGCCTGCTCCCAGTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTGGTCCGCTGCCTCCCCCAATCTCGTCTCCTCTCCTTCCTCATGGCCAGGGCAAATAATTTATGTGTaGTCCGCTGCCTCCCCCAAT | + |
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Preference number: 2 (lower is better) Translates to: VWSAASPNLVSSPSSWPGQIIYV*SAASPN Trigger: ATTGGGGGAGGCAGCGGACCACACATAAATTATTTG...CCCTGGCCATGAGGAAGGAGAGGAGACGAGATTGGGGGAGGCAGCGGACCACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
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| 3UTR-3UTR TCA 90 bp | ATCTCGTCTCCTCTCCTTCCTCATGGCCAGGGGACAGCCGCATCACACGTGGACAACTGGGAGCAGGCATaGCATCAAATAATTTATGTG | + |
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Preference number: 2 (lower is better) Translates to: ISSPLLPHGQGTAASHVDNWEQA*HQIIYV Trigger: CACATAAATTATTTGATGTCATGCCTGCTCCCAGTT...GTCCACGTGTGATGCGGCTGTCCCCTGGCCATGAGGAAGGAGAGGAGACGAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000235163.2 |
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| 3UTR-3UTR CCA 90 bp | CTACCTCATTATTTCCTTAAGTCTTGCTCTATTGACTCCTCGTTCCTGAGTTTCAGCATGGCTTCCAAGTaGGAAGGAGTCTCTTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: LPHYFLKSCSIDSSFLSFSMASK*EGVSCV Trigger: CACACAAGAGACTCCTTCCCACTTGGAAGCCATGCT...GAAACTCAGGAACGAGGAGTCAATAGAGCAAGACTTAAGGAAATAATGAGGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000235163.2 |
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| 3UTR-3UTR CCA 90 bp | GTCTCTTGTGTGGTAGGTTCTTCTGGATCTAGAGGAATCTCATGTCCTTTAGAACAAATAATTTATGTGTaGTCCGCTGCCTCCCCCAAT | + |
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Preference number: 2 (lower is better) Translates to: VSCVVGSSGSRGISCPLEQIIYV*SAASPN Trigger: ATTGGGGGAGGCAGCGGACCACACATAAATTATTTG...TTCTAAAGGACATGAGATTCCTCTAGATCCAGAAGAACCTACCACACAAGAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000235163.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGTAGAATGGACAATCTACCTCATTATTTCCTTAAGTCTTGCTCTATTGACTAGCATGGCTTCCAAGTaGGAAGGAGTCTCTTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: LVEWTIYLIISLSLALLTSMASK*EGVSCV Trigger: CACACAAGAGACTCCTTCCCACTTGGAAGCCATGCT...AGTCAATAGAGCAAGACTTAAGGAAATAATGAGGTAGATTGTCCATTCTACTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000235163.2 |
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| 3UTR-3UTR TCA 90 bp | CTAGTAGAATGGACAATCTACCTCATTATTTCCTTAAGTCTTGCTCTATTGACTAAGAATCTTCTCTGCTaGCATGCTGCCTTTGCTGTT | + |
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Preference number: 2 (lower is better) Translates to: LVEWTIYLIISLSLALLTKNLLC*HAAFAV Trigger: AACAGCAAAGGCAGCATGTCAGCAGAGAAGATTCTT...AGTCAATAGAGCAAGACTTAAGGAAATAATGAGGTAGATTGTCCATTCTACTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235163.2 |
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| 3UTR CCA 72 bp | GCTGCCTCCCCCAATCTCGTCTCCTCTCCTTCCTCATaGCCAGGGGACAGCCGCATCACACGTGGACCCATG | + |
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Preference number: 3 (lower is better) Translates to: AASPNLVSSPSS*PGDSRITRGPM Trigger: CATGGGTCCACGTGTGATGCGGCTGTCCCCTGGCCATGAGGAAGGAGAGGAGACGAGATTGGGGGAGGCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000235163.2 |
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| 3UTR-3UTR CAA 90 bp | GTCTCCTCTCCTTCCTCATGGCCAGGGGACAGCCGCATCACACGTGGACCCATGGCTGACATGCTGCCTTaGCTGTTGTTCACGTTGATG | + |
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Preference number: 3 (lower is better) Translates to: VSSPSSWPGDSRITRGPMADMLP*LLFTLM Trigger: CATCAACGTGAACAACAGCAAAGGCAGCATGTCAGC...CATGGGTCCACGTGTGATGCGGCTGTCCCCTGGCCATGAGGAAGGAGAGGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235163.2 |
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| 3UTR GCA 72 bp | GCAGGCATGACATCAAATAATTTATGTGTGGTCCGCTaGCTCCCCCAATCTCGTCTCCTCTCCTTCCTCATG | + |
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Preference number: 3 (lower is better) Translates to: AGMTSNNLCVVR*LPQSRLLSFLM Trigger: CATGAGGAAGGAGAGGAGACGAGATTGGGGGAGGCAGCGGACCACACATAAATTATTTGATGTCATGCCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
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| CDS-3UTR TCA 90 bp | GTCTCCTCTCCTTCCTCATGGCCAGGGGACAGCCGCATCACACGTGGACCCATGAAGGGGTGTCAGTGTTaGCCCCAGCCCGTGGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: VSSPSSWPGDSRITRGPMKGCQC*PQPVGF Trigger: GAAGCCCACGGGCTGGGGTCAACACTGACACCCCTT...CATGGGTCCACGTGTGATGCGGCTGTCCCCTGGCCATGAGGAAGGAGAGGAGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097618.10 |
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| CDS-3UTR GCA 90 bp | CTCGTCTCCTCTCCTTCCTCATGGCCAGGGGACAGCCGCATCACACGTGGACCCTGCTGCTGCTGCTGCTaGTGCTCCTTTCTGGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: LVSSPSSWPGDSRITRGPCCCCC*CSFLGF Trigger: GAACCCCAGAAAGGAGCAGCAGCAGCAGCAGCAGCA...GGGTCCACGTGTGATGCGGCTGTCCCCTGGCCATGAGGAAGGAGAGGAGACGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000235163.2 |
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| CDS-3UTR TCA 90 bp | TGGTCCGCTGCCTCCCCCAATCTCGTCTCCTCTCCTTCCTCATGGCCAGGGGACGCTTTCAGACAGCCCTaGACTCCCTGGTTTCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: WSAASPNLVSSPSSWPGDAFRQP*TPWFLW Trigger: CCACAGAAACCAGGGAGTTCAGGGCTGTCTGAAAGC...GTCCCCTGGCCATGAGGAAGGAGAGGAGACGAGATTGGGGGAGGCAGCGGACCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000235163.2 |
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| CDS-3UTR TCA 90 bp | GTGGTCCGCTGCCTCCCCCAATCTCGTCTCCTCTCCTTCCTCATGGCCAGGGGAGCTTTCAGACAGCCCTaGACTCCCTGGTTTCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: VVRCLPQSRLLSFLMARGAFRQP*TPWFLW Trigger: CCACAGAAACCAGGGAGTTCAGGGCTGTCTGAAAGC...TCCCCTGGCCATGAGGAAGGAGAGGAGACGAGATTGGGGGAGGCAGCGGACCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000235163.2 |
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| CDS-3UTR CCA 90 bp | GCTGCCTCCCCCAATCTCGTCTCCTCTCCTTCCTCATGGCCAGGGGACAGCCGCAAGGCTGGTGGTTTCTaGACTGGGAGTAGCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AASPNLVSSPSSWPGDSRKAGGF*TGSSIQ Trigger: CTGGATGCTACTCCCAGTCCAGAAACCACCAGCCTT...GCGGCTGTCCCCTGGCCATGAGGAAGGAGAGGAGACGAGATTGGGGGAGGCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
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| CDS-3UTR TCA 90 bp | TTATGTGTGGTCCGCTGCCTCCCCCAATCTCGTCTCCTCTCCTTCCTCATGGCCCTCCCCTGTGGGAGTTaGTGGGCAAGAAGGGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: LCVVRCLPQSRLLSFLMALPCGS*WARRGV Trigger: GACACCCCTTCTTGCCCATCAACTCCCACAGGGGAG...GGCCATGAGGAAGGAGAGGAGACGAGATTGGGGGAGGCAGCGGACCACACATAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000097618.10 |
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| CDS-3UTR TCA 90 bp | GGTCCGCTGCCTCCCCCAATCTCGTCTCCTCTCCTTCCTCATGGCCAGGGGACATCTTTCAGACAGCCCTaGACTCCCTGGTTTCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: GPLPPPISSPLLPHGQGTSFRQP*TPWFLW Trigger: CCACAGAAACCAGGGAGTTCAGGGCTGTCTGAAAGA...TGTCCCCTGGCCATGAGGAAGGAGAGGAGACGAGATTGGGGGAGGCAGCGGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000134656.8 |
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| CDS-3UTR CCA 90 bp | CTCGTCTCCTCTCCTTCCTCATGGCCAGGGGACAGCCGCATCACACGTGGACCCGTGTGCTTCTGTGGCTaGAAGGACATCAAGTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LVSSPSSWPGDSRITRGPVCFCG*KDIKSG Trigger: GCCTGACTTGATGTCCTTCCAGCCACAGAAGCACAC...GGGTCCACGTGTGATGCGGCTGTCCCCTGGCCATGAGGAAGGAGAGGAGACGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000235163.2 |
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| CDS-3UTR CCA 90 bp | GTCCGCTGCCTCCCCCAATCTCGTCTCCTCTCCTTCCTCATGGCCAGGGGACAGGTGTGCTTCTGTGGCTaGAAGGACATCAAGTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: VRCLPQSRLLSFLMARGQVCFCG*KDIKSG Trigger: GCCTGACTTGATGTCCTTCCAGCCACAGAAGCACAC...CTGTCCCCTGGCCATGAGGAAGGAGAGGAGACGAGATTGGGGGAGGCAGCGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
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| CDS-3UTR CCA 90 bp | CGCTGCCTCCCCCAATCTCGTCTCCTCTCCTTCCTCATGGCCAGGGGACAGCCGCAGTGTGTGCTTCTGTaGCTGGAAGGACATCAAGTC | + |
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Preference number: 4 (lower is better) Translates to: RCLPQSRLLSFLMARGQPQCVLL*LEGHQV Trigger: GACTTGATGTCCTTCCAGCCACAGAAGCACACACTG...CGGCTGTCCCCTGGCCATGAGGAAGGAGAGGAGACGAGATTGGGGGAGGCAGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
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| CDS-3UTR CCA 90 bp | GTGTGGTCCGCTGCCTCCCCCAATCTCGTCTCCTCTCCTTCCTCATGGCCAGGGAAGGCTGGTGGTTTCTaGACTGGGAGTAGCATCCAG | + |
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Preference number: 4 (lower is better) Translates to: VWSAASPNLVSSPSSWPGKAGGF*TGSSIQ Trigger: CTGGATGCTACTCCCAGTCCAGAAACCACCAGCCTT...CCCTGGCCATGAGGAAGGAGAGGAGACGAGATTGGGGGAGGCAGCGGACCACAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
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| CDS-3UTR GCA 90 bp | TATGTGTGGTCCGCTGCCTCCCCCAATCTCGTCTCCTCTCCTTCCTCATGGCCATGCTGCTGCTGCTGCTaGTGCTCCTTTCTGGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: YVWSAASPNLVSSPSSWPCCCCC*CSFLGF Trigger: GAACCCCAGAAAGGAGCAGCAGCAGCAGCAGCAGCA...TGGCCATGAGGAAGGAGAGGAGACGAGATTGGGGGAGGCAGCGGACCACACATA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
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| CDS-3UTR CCA 90 bp | CCGCTGCCTCCCCCAATCTCGTCTCCTCTCCTTCCTCATGGCCAGGGGACAGCCTTTTTGTCTGAAGGCTaGTGGTTTCTGGACTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: PLPPPISSPLLPHGQGTAFLSEG*WFLDWE Trigger: CTCCCAGTCCAGAAACCACCAGCCTTCAGACAAAAA...GGCTGTCCCCTGGCCATGAGGAAGGAGAGGAGACGAGATTGGGGGAGGCAGCGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
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| CDS-3UTR GCA 90 bp | CTCCCCCAATCTCGTCTCCTCTCCTTCCTCATGGCCAGGGGACAGCCGCATCACAGTAGCATCCAGAGATaGTTCTCCTCTCCTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: LPQSRLLSFLMARGQPHHSSIQR*FSSPAA Trigger: AGCAGCAGGAGAGGAGAAGCATCTCTGGATGCTACT...GTGATGCGGCTGTCCCCTGGCCATGAGGAAGGAGAGGAGACGAGATTGGGGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000235163.2 |
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| CDS-3UTR GCA 90 bp | CTGCCTCCCCCAATCTCGTCTCCTCTCCTTCCTCATGGCCAGGGGACAGCCGCATCTCTGCTGACATGCTaGCTTTGCTGTTGTTCACGT | + |
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Preference number: 4 (lower is better) Translates to: LPPPISSPLLPHGQGTAASLLTC*LCCCSR Trigger: ACGTGAACAACAGCAAAGGCAGCATGTCAGCAGAGA...TGCGGCTGTCCCCTGGCCATGAGGAAGGAGAGGAGACGAGATTGGGGGAGGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 |
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| CDS-3UTR CCA 90 bp | ATCTCGTCTCCTCTCCTTCCTCATGGCCAGGGGACAGCCGCATCACACGTGGACTCTGACTCTCCCCTGTaGGAGTTGATGGGCAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: ISSPLLPHGQGTAASHVDSDSPL*ELMGKK Trigger: CTTCTTGCCCATCAACTCCCACAGGGGAGAGTCAGA...GTCCACGTGTGATGCGGCTGTCCCCTGGCCATGAGGAAGGAGAGGAGACGAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097618.10 |
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| CDS-3UTR CCA 90 bp | TCTCGTCTCCTCTCCTTCCTCATGGCCAGGGGACAGCCGCATCACACGTGGACCCAGTGTGTGCTTCTGTaGCTGGAAGGACATCAAGTC | + |
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Preference number: 4 (lower is better) Translates to: SRLLSFLMARGQPHHTWTQCVLL*LEGHQV Trigger: GACTTGATGTCCTTCCAGCCACAGAAGCACACACTG...GGTCCACGTGTGATGCGGCTGTCCCCTGGCCATGAGGAAGGAGAGGAGACGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000235163.2 |
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| CDS-3UTR TCA 90 bp | CTGCCTCCCCCAATCTCGTCTCCTCTCCTTCCTCATGGCCAGGGGACAGCCGCAAAGAATCTTCTCTGCTaGCATGCTGCCTTTGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: LPPPISSPLLPHGQGTAAKNLLC*HAAFAV Trigger: AACAGCAAAGGCAGCATGTCAGCAGAGAAGATTCTT...TGCGGCTGTCCCCTGGCCATGAGGAAGGAGAGGAGACGAGATTGGGGGAGGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 |
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| CDS-3UTR GCA 90 bp | GGTCCGCTGCCTCCCCCAATCTCGTCTCCTCTCCTTCCTCATGGCCAGGGGACAACTGTTTATCCATGGTaGTTGACCTTGGTGTCACAG | + |
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Preference number: 4 (lower is better) Translates to: GPLPPPISSPLLPHGQGTTVYPW*LTLVSQ Trigger: CTGTGACACCAAGGTCAAGCACCATGGATAAACAGT...TGTCCCCTGGCCATGAGGAAGGAGAGGAGACGAGATTGGGGGAGGCAGCGGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
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| CDS-3UTR GCA 90 bp | TCTCCTCTCCTTCCTCATGGCCAGGGGACAGCCGCATCACACGTGGACCCATGGTCTCTGCTGACATGCTaGCTTTGCTGTTGTTCACGT | + |
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Preference number: 4 (lower is better) Translates to: SPLLPHGQGTAASHVDPWSLLTC*LCCCSR Trigger: ACGTGAACAACAGCAAAGGCAGCATGTCAGCAGAGA...CCATGGGTCCACGTGTGATGCGGCTGTCCCCTGGCCATGAGGAAGGAGAGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 |
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| CDS-3UTR GCA 90 bp | GTGTGGTCCGCTGCCTCCCCCAATCTCGTCTCCTCTCCTTCCTCATGGCCAGGGTCTTCTCTGCTGACATaGTGCCTTTGCTGTTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: VWSAASPNLVSSPSSWPGSSLLT*CLCCCS Trigger: TGAACAACAGCAAAGGCAGCATGTCAGCAGAGAAGA...CCCTGGCCATGAGGAAGGAGAGGAGACGAGATTGGGGGAGGCAGCGGACCACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 |
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| CDS-3UTR GCA 90 bp | CTGCCTCCCCCAATCTCGTCTCCTCTCCTTCCTCATGGCCAGGGGACAGCCGCATCTTCTCTGCTGACATaGTGCCTTTGCTGTTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: LPPPISSPLLPHGQGTAASSLLT*CLCCCS Trigger: TGAACAACAGCAAAGGCAGCATGTCAGCAGAGAAGA...TGCGGCTGTCCCCTGGCCATGAGGAAGGAGAGGAGACGAGATTGGGGGAGGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 |
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| CDS-3UTR CCA 90 bp | TTTATGTGTGGTCCGCTGCCTCCCCCAATCTCGTCTCCTCTCCTTCCTCATGGCGTTGACCCCAGCCCGTaGGCTTCCAGAGAAATGTCT | + |
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Preference number: 4 (lower is better) Translates to: FMCGPLPPPISSPLLPHGVDPSP*ASREMS Trigger: AGACATTTCTCTGGAAGCCCACGGGCTGGGGTCAAC...GCCATGAGGAAGGAGAGGAGACGAGATTGGGGGAGGCAGCGGACCACACATAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097618.10 |
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| CDS-3UTR TCA 90 bp | GTGTGGTCCGCTGCCTCCCCCAATCTCGTCTCCTCTCCTTCCTCATGGCCAGGGGATACCAAGGAGACCTaGGAAGACTTCTGTAGAATT | + |
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Preference number: 4 (lower is better) Translates to: VWSAASPNLVSSPSSWPGDTKET*EDFCRI Trigger: AATTCTACAGAAGTCTTCTCAGGTCTCCTTGGTATC...CCCTGGCCATGAGGAAGGAGAGGAGACGAGATTGGGGGAGGCAGCGGACCACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
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| CDS-3UTR TCA 90 bp | ATTTATGTGTGGTCCGCTGCCTCCCCCAATCTCGTCTCCTCTCCTTCCTCATGGGCTTTCAGACAGCCCTaGACTCCCTGGTTTCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: IYVWSAASPNLVSSPSSWAFRQP*TPWFLW Trigger: CCACAGAAACCAGGGAGTTCAGGGCTGTCTGAAAGC...CCATGAGGAAGGAGAGGAGACGAGATTGGGGGAGGCAGCGGACCACACATAAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000235163.2 |
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| CDS-3UTR TCA 90 bp | TCTCGTCTCCTCTCCTTCCTCATGGCCAGGGGACAGCCGCATCACACGTGGACCAAGAATCTTCTCTGCTaGCATGCTGCCTTTGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: SRLLSFLMARGQPHHTWTKNLLC*HAAFAV Trigger: AACAGCAAAGGCAGCATGTCAGCAGAGAAGATTCTT...GGTCCACGTGTGATGCGGCTGTCCCCTGGCCATGAGGAAGGAGAGGAGACGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 |
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| CDS-3UTR GCA 90 bp | TGTGTGGTCCGCTGCCTCCCCCAATCTCGTCTCCTCTCCTTCCTCATGGCCAGGACTGTTTATCCATGGTaGTTGACCTTGGTGTCACAG | + |
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Preference number: 4 (lower is better) Translates to: CVVRCLPQSRLLSFLMARTVYPW*LTLVSQ Trigger: CTGTGACACCAAGGTCAAGCACCATGGATAAACAGT...CCTGGCCATGAGGAAGGAGAGGAGACGAGATTGGGGGAGGCAGCGGACCACACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
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| CDS-3UTR CCA 90 bp | GCAGGCATGACATCAAATAATTTATGTGTGGTCCGCTGCCTCCCCCAATCTCGTGCCTCATGGCTCCGCTaGTCCCCAGATCAGCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: AGMTSNNLCVVRCLPQSRASWLR*SPDQLG Trigger: ACCCAGCTGATCTGGGGACCAGCGGAGCCATGAGGC...ACGAGATTGGGGGAGGCAGCGGACCACACATAAATTATTTGATGTCATGCCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133064.8 |
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| CDS-3UTR TCA 90 bp | GTCTCCTCTCCTTCCTCATGGCCAGGGGACAGCCGCATCACACGTGGACCCATGGATACCAAGGAGACCTaGGAAGACTTCTGTAGAATT | + |
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Preference number: 4 (lower is better) Translates to: VSSPSSWPGDSRITRGPMDTKET*EDFCRI Trigger: AATTCTACAGAAGTCTTCTCAGGTCTCCTTGGTATC...CATGGGTCCACGTGTGATGCGGCTGTCCCCTGGCCATGAGGAAGGAGAGGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000235163.2 |
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| CDS-3UTR GCA 90 bp | GGCATGACATCAAATAATTTATGTGTGGTCCGCTGCCTCCCCCAATCTCGTCTCTGCTGCTGCTGCTGCTaGTGCTCCTTTCTGGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: GMTSNNLCVVRCLPQSRLCCCCC*CSFLGF Trigger: GAACCCCAGAAAGGAGCAGCAGCAGCAGCAGCAGCA...GAGACGAGATTGGGGGAGGCAGCGGACCACACATAAATTATTTGATGTCATGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
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| CDS-3UTR CCA 90 bp | AATAATTTATGTGTGGTCCGCTGCCTCCCCCAATCTCGTCTCCTCTCCTTCCTCTCACACGTGGACCCATaGCGACTCCAGGTCACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NNLCVVRCLPQSRLLSFLSHVDP*RLQVTL Trigger: AAGAGTGACCTGGAGTCGCCATGGGTCCACGTGTGA...GAGGAAGGAGAGGAGACGAGATTGGGGGAGGCAGCGGACCACACATAAATTATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134656.8 |
||
| CDS-3UTR GCA 90 bp | GAAGGAGTCTCTTGTGTGGTAGGTTCTTCTGGATCTAGAGGAATCTCATGTCCTTGCTGCTGCTGCTGCTaGTCCTTTCTGGGGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EGVSCVVGSSGSRGISCPCCCCC*SFLGFL Trigger: CAGGAACCCCAGAAAGGAGCAGCAGCAGCAGCAGCA...AGGACATGAGATTCCTCTAGATCCAGAAGAACCTACCACACAAGAGACTCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000235163.2 |
||
| CDS-3UTR GCA 90 bp | CACGTGGACCCATGGCGACTCCAGGTCACTCTTAAAGAATCTTCTCTGCTGACAAGTAGCATCCAGAGATaGTTCTCCTCTCCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HVDPWRLQVTLKESSLLTSSIQR*FSSPAA Trigger: AGCAGCAGGAGAGGAGAAGCATCTCTGGATGCTACT...TGTCAGCAGAGAAGATTCTTTAAGAGTGACCTGGAGTCGCCATGGGTCCACGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235163.2 |
||
| CDS-3UTR CCA 90 bp | AATTTATGTGTGGTCCGCTGCCTCCCCCAATCTCGTCTCCTCTCCTTCCTCATGTTTTTGTCTGAAGGCTaGTGGTTTCTGGACTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NLCVVRCLPQSRLLSFLMFLSEG*WFLDWE Trigger: CTCCCAGTCCAGAAACCACCAGCCTTCAGACAAAAA...CATGAGGAAGGAGAGGAGACGAGATTGGGGGAGGCAGCGGACCACACATAAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
||
| CDS-3UTR GCA 90 bp | GGCATGACATCAAATAATTTATGTGTGGTCCGCTGCCTCCCCCAATCTCGTCTCAGTAGCATCCAGAGATaGTTCTCCTCTCCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GMTSNNLCVVRCLPQSRLSSIQR*FSSPAA Trigger: AGCAGCAGGAGAGGAGAAGCATCTCTGGATGCTACT...GAGACGAGATTGGGGGAGGCAGCGGACCACACATAAATTATTTGATGTCATGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
||
| CDS-3UTR TCA 90 bp | GTCTCTTGTGTGGTAGGTTCTTCTGGATCTAGAGGAATCTCATGTCCTTTAGAAGAGAGCTGTAGCCTCTaGCTCTCCCCTGTGGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VSCVVGSSGSRGISCPLEESCSL*LSPVGV Trigger: AACTCCCACAGGGGAGAGTCAGAGGCTACAGCTCTC...TTCTAAAGGACATGAGATTCCTCTAGATCCAGAAGAACCTACCACACAAGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097618.10 |
||
| CDS-3UTR GCA 90 bp | ATAATTTATGTGTGGTCCGCTGCCTCCCCCAATCTCGTCTCCTCTCCTTCCTCAACTGTTTATCCATGGTaGTTGACCTTGGTGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: IIYVWSAASPNLVSSPSSTVYPW*LTLVSQ Trigger: CTGTGACACCAAGGTCAAGCACCATGGATAAACAGT...TGAGGAAGGAGAGGAGACGAGATTGGGGGAGGCAGCGGACCACACATAAATTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
||
| CDS-3UTR CCA 90 bp | GACATGCTGCCTTTGCTGTTGTTCACGTTGATGTTCCTCATGGAGATGAGTGTGCAGTGTGTGCTTCTGTaGCTGGAAGGACATCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: DMLPLLLFTLMFLMEMSVQCVLL*LEGHQV Trigger: GACTTGATGTCCTTCCAGCCACAGAAGCACACACTG...CACACTCATCTCCATGAGGAACATCAACGTGAACAACAGCAAAGGCAGCATGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235163.2 |
||
| CDS-3UTR CCA 90 bp | GGCATGACATCAAATAATTTATGTGTGGTCCGCTGCCTCCCCCAATCTCGTCTCTTTTTGTCTGAAGGCTaGTGGTTTCTGGACTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GMTSNNLCVVRCLPQSRLFLSEG*WFLDWE Trigger: CTCCCAGTCCAGAAACCACCAGCCTTCAGACAAAAA...GAGACGAGATTGGGGGAGGCAGCGGACCACACATAAATTATTTGATGTCATGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
||
| CDS-3UTR CCA 90 bp | GTGGTAGGTTCTTCTGGATCTAGAGGAATCTCATGTCCTTTAGAACTGGGAGCACAGTGTGTGCTTCTGTaGCTGGAAGGACATCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VVGSSGSRGISCPLELGAQCVLL*LEGHQV Trigger: GACTTGATGTCCTTCCAGCCACAGAAGCACACACTG...TGCTCCCAGTTCTAAAGGACATGAGATTCCTCTAGATCCAGAAGAACCTACCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000235163.2 |
||
| CDS-3UTR CCA 90 bp | GGAGTCTCTTGTGTGGTAGGTTCTTCTGGATCTAGAGGAATCTCATGTCCTTTATCTCTCCATTGGCTGTaGAGCAGCTTTCAGACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GVSCVVGSSGSRGISCPLSLHWL*SSFQTA Trigger: GGCTGTCTGAAAGCTGCTCCACAGCCAATGGAGAGA...TAAAGGACATGAGATTCCTCTAGATCCAGAAGAACCTACCACACAAGAGACTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 |
||
| CDS-3UTR GCA 90 bp | GGAATCTCATGTCCTTTAGAACTGGGAGCAGGCATGACATCAAATAATTTATGTTGCTGCTGCTGCTGCTaGTGCTCCTTTCTGGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GISCPLELGAGMTSNNLCCCCCC*CSFLGF Trigger: GAACCCCAGAAAGGAGCAGCAGCAGCAGCAGCAGCA...ACATAAATTATTTGATGTCATGCCTGCTCCCAGTTCTAAAGGACATGAGATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
||
| CDS-3UTR GCA 90 bp | GGATCTAGAGGAATCTCATGTCCTTTAGAACTGGGAGCAGGCATGACATCAAATAGTAGCATCCAGAGATaGTTCTCCTCTCCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSRGISCPLELGAGMTSNSSIQR*FSSPAA Trigger: AGCAGCAGGAGAGGAGAAGCATCTCTGGATGCTACT...ATTTGATGTCATGCCTGCTCCCAGTTCTAAAGGACATGAGATTCCTCTAGATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000235163.2 |
||
| CDS-3UTR CCA 90 bp | TCTTGTGTGGTAGGTTCTTCTGGATCTAGAGGAATCTCATGTCCTTTAGAACTGAAGGCTGGTGGTTTCTaGACTGGGAGTAGCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SCVVGSSGSRGISCPLELKAGGF*TGSSIQ Trigger: CTGGATGCTACTCCCAGTCCAGAAACCACCAGCCTT...CAGTTCTAAAGGACATGAGATTCCTCTAGATCCAGAAGAACCTACCACACAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000235163.2 |
||
| 3UTR CAA 72 bp | TTCTCTGCTGACATGCTGCCTTTGCTGTTGTTCACGTaGATGTTCCTCATGGAGATGAGTGTGATGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FSADMLPLLLFT*MFLMEMSVMLS Trigger: AGACAGCATCACACTCATCTCCATGAGGAACATCAACGTGAACAACAGCAAAGGCAGCATGTCAGCAGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235163.2 |
||
| CDS-3UTR GCA 90 bp | GGATCTAGAGGAATCTCATGTCCTTTAGAACTGGGAGCAGGCATGACATCAAATACTGTTTATCCATGGTaGTTGACCTTGGTGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GSRGISCPLELGAGMTSNTVYPW*LTLVSQ Trigger: CTGTGACACCAAGGTCAAGCACCATGGATAAACAGT...ATTTGATGTCATGCCTGCTCCCAGTTCTAAAGGACATGAGATTCCTCTAGATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000235163.2 |
||
| CDS-3UTR CCA 90 bp | GTAGAATGGACAATCTACCTCATTATTTCCTTAAGTCTTGCTCTATTGACTCCTGTGTGCTTCTGTGGCTaGAAGGACATCAAGTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VEWTIYLIISLSLALLTPVCFCG*KDIKSG Trigger: GCCTGACTTGATGTCCTTCCAGCCACAGAAGCACAC...AGGAGTCAATAGAGCAAGACTTAAGGAAATAATGAGGTAGATTGTCCATTCTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000235163.2 |
||
| CDS-3UTR CCA 90 bp | CTAGTAGAATGGACAATCTACCTCATTATTTCCTTAAGTCTTGCTCTATTGACTAAGGCTGGTGGTTTCTaGACTGGGAGTAGCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LVEWTIYLIISLSLALLTKAGGF*TGSSIQ Trigger: CTGGATGCTACTCCCAGTCCAGAAACCACCAGCCTT...AGTCAATAGAGCAAGACTTAAGGAAATAATGAGGTAGATTGTCCATTCTACTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000235163.2 |
||
| CDS-3UTR CCA 90 bp | CTAGTAGAATGGACAATCTACCTCATTATTTCCTTAAGTCTTGCTCTATTGACTTCTCTCCATTGGCTGTaGAGCAGCTTTCAGACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LVEWTIYLIISLSLALLTSLHWL*SSFQTA Trigger: GGCTGTCTGAAAGCTGCTCCACAGCCAATGGAGAGA...AGTCAATAGAGCAAGACTTAAGGAAATAATGAGGTAGATTGTCCATTCTACTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 |
||
| CDS-3UTR CCA 90 bp | GTAGAATGGACAATCTACCTCATTATTTCCTTAAGTCTTGCTCTATTGACTCCTTTTTTGTCTGAAGGCTaGTGGTTTCTGGACTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VEWTIYLIISLSLALLTPFLSEG*WFLDWE Trigger: CTCCCAGTCCAGAAACCACCAGCCTTCAGACAAAAA...AGGAGTCAATAGAGCAAGACTTAAGGAAATAATGAGGTAGATTGTCCATTCTAC 41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000235163.2 |
||
| CDS GCA 90 bp | CCAGAGATGCTTCTCCTCTCCTGCTGCTGCTGCTGCTGCTGCTGCTaGTGCTCCTTTCTGGGGTTCCTGTGCCAGGTCCCAGTGTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PEMLLLSCCCCCCCC*CSFLGFLCQVPVCA Trigger: AGCACACACTGGGACCTGGCACAGGAACCCCAGAAAGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGAGGAGAAGCATCTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000097618.10 ENSMUST00000123973.2 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
||
| CDS CCA 90 bp | TCCTCTCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTCCTTTCTaGGGTTCCTGTGCCAGGTCCCAGTGTGTGCTTCTGTGGCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SSPAAAAAAAAAAPF*GSCARSQCVLLWLE Trigger: TTCCAGCCACAGAAGCACACACTGGGACCTGGCACAGGAACCCCAGAAAGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000097618.10 ENSMUST00000123973.2 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
||
| CDS GCA 90 bp | GAGATGCTTCTCCTCTCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTaGTCCTTTCTGGGGTTCCTGTGCCAGGTCCCAGTGTGTGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: EMLLLSCCCCCCCCC*SFLGFLCQVPVCAS Trigger: AGAAGCACACACTGGGACCTGGCACAGGAACCCCAGAAAGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGAGGAGAAGCATCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000097618.10 ENSMUST00000123973.2 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
||
| CDS GCA 90 bp | CATCCAGAGATGCTTCTCCTCTCCTGCTGCTGCTGCTGCTGCTGCTaGTGCTGCTCCTTTCTGGGGTTCCTGTGCCAGGTCCCAGTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: HPEMLLLSCCCCCCC*CCSFLGFLCQVPVC Trigger: ACACACTGGGACCTGGCACAGGAACCCCAGAAAGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGAGGAGAAGCATCTCTGGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000097618.10 ENSMUST00000123973.2 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
||
| CDS GCA 90 bp | TGCTGCTGCTGCTGCTGCTGCTGCTGCTCCTTTCTGGGGTTCCTGTaGCAGGTCCCAGTGTGTGCTTCTGTGGCTGGAAGGACATCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: CCCCCCCCCSFLGFL*QVPVCASVAGRTSS Trigger: ACTTGATGTCCTTCCAGCCACAGAAGCACACACTGGGACCTGGCACAGGAACCCCAGAAAGGAGCAGCAGCAGCAGCAGCAGCAGCAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000097618.10 ENSMUST00000123973.2 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
||
| CDS GCA 90 bp | CTGCTGCTGCTCCTTTCTGGGGTTCCTGTGCCAGGTCCCAGTGTGTaGTTCTGTGGCTGGAAGGACATCAAGTCAGGCAAGGAAAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LLLLLSGVPVPGPSV*FCGWKDIKSGKERD Trigger: GTCCCTTTCCTTGCCTGACTTGATGTCCTTCCAGCCACAGAAGCACACACTGGGACCTGGCACAGGAACCCCAGAAAGGAGCAGCAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000097618.10 ENSMUST00000123973.2 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
||
| CDS GCA 90 bp | TGTCTGAAGGCTGGTGGTTTCTGGACTGGGAGTAGCATCCAGAGATaGTTCTCCTCTCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: CLKAGGFWTGSSIQR*FSSPAAAAAAAAAA Trigger: AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGAGGAGAAGCATCTCTGGATGCTACTCCCAGTCCAGAAACCACCAGCCTTCAGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000097618.10 ENSMUST00000123973.2 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
||
| CDS-3UTR CAA 90 bp | TCTCGTCTCCTCTCCTTCCTCATGGCCAGGGGACAGCCGCATCACACGTGGACCGTTTATCCATGGTGCTaGACCTTGGTGTCACAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SRLLSFLMARGQPHHTWTVYPWC*TLVSQA Trigger: AGCCTGTGACACCAAGGTCAAGCACCATGGATAAAC...GGTCCACGTGTGATGCGGCTGTCCCCTGGCCATGAGGAAGGAGAGGAGACGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000235163.2 |
||
| CDS-3UTR CAA 90 bp | CTCCCCCAATCTCGTCTCCTCTCCTTCCTCATGGCCAGGGGACAGCCGCATCACGCTGACATGCTGCCTTaGCTGTTGTTCACGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: LPQSRLLSFLMARGQPHHADMLP*LLFTLM Trigger: CATCAACGTGAACAACAGCAAAGGCAGCATGTCAGC...GTGATGCGGCTGTCCCCTGGCCATGAGGAAGGAGAGGAGACGAGATTGGGGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 |
||
| CDS-3UTR CAA 90 bp | CCAATCTCGTCTCCTCTCCTTCCTCATGGCCAGGGGACAGCCGCATCACACGTGGTTTATCCATGGTGCTaGACCTTGGTGTCACAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PISSPLLPHGQGTAASHVVYPWC*TLVSQA Trigger: AGCCTGTGACACCAAGGTCAAGCACCATGGATAAAC...CACGTGTGATGCGGCTGTCCCCTGGCCATGAGGAAGGAGAGGAGACGAGATTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000235163.2 |
||
| CDS-3UTR CAA 90 bp | GGTCCGCTGCCTCCCCCAATCTCGTCTCCTCTCCTTCCTCATGGCCAGGGGACAGGATGGTCATCTTTTTaGTCTGAAGGCTGGTGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: GPLPPPISSPLLPHGQGTGWSSF*SEGWWF Trigger: AAACCACCAGCCTTCAGACAAAAAAGATGACCATCC...TGTCCCCTGGCCATGAGGAAGGAGAGGAGACGAGATTGGGGGAGGCAGCGGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
||
| CDS-3UTR CAA 90 bp | GTCCGCTGCCTCCCCCAATCTCGTCTCCTCTCCTTCCTCATGGCCAGGGGACAGGGATGGTCATCTTTTTaGTCTGAAGGCTGGTGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: VRCLPQSRLLSFLMARGQGWSSF*SEGWWF Trigger: AAACCACCAGCCTTCAGACAAAAAAGATGACCATCC...CTGTCCCCTGGCCATGAGGAAGGAGAGGAGACGAGATTGGGGGAGGCAGCGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGGTCCGCTGCCTCCCCCAATCTCGTCTCCTCTCCTTCCTCATGGCCAGGGGGATCTTCAGACTCCTaGTTCTTCCGACACTTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: VWSAASPNLVSSPSSWPGGSSDS*FFRHLN Trigger: ATTTAAGTGTCGGAAGAACAAGGAGTCTGAAGATCC...CCCTGGCCATGAGGAAGGAGAGGAGACGAGATTGGGGGAGGCAGCGGACCACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
||
| CDS-3UTR CAA 90 bp | GGTCCGCTGCCTCCCCCAATCTCGTCTCCTCTCCTTCCTCATGGCCAGGGGACAGGATCTTCAGACTCCTaGTTCTTCCGACACTTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: GPLPPPISSPLLPHGQGTGSSDS*FFRHLN Trigger: ATTTAAGTGTCGGAAGAACAAGGAGTCTGAAGATCC...TGTCCCCTGGCCATGAGGAAGGAGAGGAGACGAGATTGGGGGAGGCAGCGGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
||
| CDS CCA 90 bp | GCTCCTTTCTGGGGTTCCTGTGCCAGGTCCCAGTGTGTGCTTCTGTaGCTGGAAGGACATCAAGTCAGGCAAGGAAAGGGACTGTTTATC | + |
|
Preference number: 5 (lower is better) Translates to: APFWGSCARSQCVLL*LEGHQVRQGKGLFI Trigger: GATAAACAGTCCCTTTCCTTGCCTGACTTGATGTCCTTCCAGCCACAGAAGCACACACTGGGACCTGGCACAGGAACCCCAGAAAGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000097618.10 ENSMUST00000123973.2 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
||
| CDS-3UTR CAA 90 bp | TGTGTGGTCCGCTGCCTCCCCCAATCTCGTCTCCTCTCCTTCCTCATGGCCAGGGGATCTTCAGACTCCTaGTTCTTCCGACACTTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: CVVRCLPQSRLLSFLMARGSSDS*FFRHLN Trigger: ATTTAAGTGTCGGAAGAACAAGGAGTCTGAAGATCC...CCTGGCCATGAGGAAGGAGAGGAGACGAGATTGGGGGAGGCAGCGGACCACACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
||
| CDS CCA 90 bp | CTTTCTGGGGTTCCTGTGCCAGGTCCCAGTGTGTGCTTCTGTGGCTaGAAGGACATCAAGTCAGGCAAGGAAAGGGACTGTTTATCCATG | + |
|
Preference number: 5 (lower is better) Translates to: LSGVPVPGPSVCFCG*KDIKSGKERDCLSM Trigger: CATGGATAAACAGTCCCTTTCCTTGCCTGACTTGATGTCCTTCCAGCCACAGAAGCACACACTGGGACCTGGCACAGGAACCCCAGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000097618.10 ENSMUST00000123973.2 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
||
| CDS-3UTR CAA 90 bp | GCAGGCATGACATCAAATAATTTATGTGTGGTCCGCTGCCTCCCCCAATCTCGTTCTCCCCTGTGGGAGTaGATGGGCAAGAAGGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: AGMTSNNLCVVRCLPQSRSPLWE*MGKKGC Trigger: ACACCCCTTCTTGCCCATCAACTCCCACAGGGGAGA...ACGAGATTGGGGGAGGCAGCGGACCACACATAAATTATTTGATGTCATGCCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000097618.10 |
||
| CDS-3UTR CAA 90 bp | ATAATTTATGTGTGGTCCGCTGCCTCCCCCAATCTCGTCTCCTCTCCTTCCTCACTGAGTTGTCGTAGGTaGAGAGCTGTAGCCTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: IIYVWSAASPNLVSSPSSLSCRR*RAVALE Trigger: CTCCAAGGCTACAGCTCTCAACCTACGACAACTCAG...TGAGGAAGGAGAGGAGACGAGATTGGGGGAGGCAGCGGACCACACATAAATTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000133064.8 ENSMUST00000235163.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGAGCAGGCATGACATCAAATAATTTATGTGTGGTCCGCTGCCTCCCCCAAGTTTATCCATGGTGCTaGACCTTGGTGTCACAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LGAGMTSNNLCVVRCLPQVYPWC*TLVSQA Trigger: AGCCTGTGACACCAAGGTCAAGCACCATGGATAAAC...TTGGGGGAGGCAGCGGACCACACATAAATTATTTGATGTCATGCCTGCTCCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
||
| CDS-3UTR CAA 90 bp | GGCATGACATCAAATAATTTATGTGTGGTCCGCTGCCTCCCCCAATCTCGTCTCCTGAGTTGTCGTAGGTaGAGAGCTGTAGCCTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GMTSNNLCVVRCLPQSRLLSCRR*RAVALE Trigger: CTCCAAGGCTACAGCTCTCAACCTACGACAACTCAG...GAGACGAGATTGGGGGAGGCAGCGGACCACACATAAATTATTTGATGTCATGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000133064.8 ENSMUST00000235163.2 |
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| CDS CCA 90 bp | GGGACTGTTTATCCATGGTGCTTGACCTTGGTGTCACAGGCTGATTaGATACCAAGGAGACCTGAGAAGACTTCTGTAGAATTTCCTGCG | + |
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Preference number: 5 (lower is better) Translates to: GTVYPWCLTLVSQAD*IPRRPEKTSVEFPA Trigger: CGCAGGAAATTCTACAGAAGTCTTCTCAGGTCTCCTTGGTATCCAATCAGCCTGTGACACCAAGGTCAAGCACCATGGATAAACAGTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000235163.2 |
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| CDS-3UTR CAA 90 bp | GGAGCAGGCATGACATCAAATAATTTATGTGTGGTCCGCTGCCTCCCCCAATCTATGCTGCCTTTGCTGTaGTTCACGTTGATGTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: GAGMTSNNLCVVRCLPQSMLPLL*FTLMFL Trigger: GAGGAACATCAACGTGAACAACAGCAAAGGCAGCAT...AGATTGGGGGAGGCAGCGGACCACACATAAATTATTTGATGTCATGCCTGCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 |
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| CDS-3UTR CAA 90 bp | GTGGTAGGTTCTTCTGGATCTAGAGGAATCTCATGTCCTTTAGAACTGGGAGCAGTTTATCCATGGTGCTaGACCTTGGTGTCACAGGCT | + |
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Preference number: 5 (lower is better) Translates to: VVGSSGSRGISCPLELGAVYPWC*TLVSQA Trigger: AGCCTGTGACACCAAGGTCAAGCACCATGGATAAAC...TGCTCCCAGTTCTAAAGGACATGAGATTCCTCTAGATCCAGAAGAACCTACCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000235163.2 |
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| CDS-3UTR CAA 90 bp | GCAGGCATGACATCAAATAATTTATGTGTGGTCCGCTGCCTCCCCCAATCTCGTGGATGGTCATCTTTTTaGTCTGAAGGCTGGTGGTTT | + |
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Preference number: 5 (lower is better) Translates to: AGMTSNNLCVVRCLPQSRGWSSF*SEGWWF Trigger: AAACCACCAGCCTTCAGACAAAAAAGATGACCATCC...ACGAGATTGGGGGAGGCAGCGGACCACACATAAATTATTTGATGTCATGCCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
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| CDS-3UTR CAA 90 bp | TGGGAAGGAGTCTCTTGTGTGGTAGGTTCTTCTGGATCTAGAGGAATCTCATGTGGATGGTCATCTTTTTaGTCTGAAGGCTGGTGGTTT | + |
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Preference number: 5 (lower is better) Translates to: WEGVSCVVGSSGSRGISCGWSSF*SEGWWF Trigger: AAACCACCAGCCTTCAGACAAAAAAGATGACCATCC...ACATGAGATTCCTCTAGATCCAGAAGAACCTACCACACAAGAGACTCCTTCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000235163.2 |
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| CDS-3UTR CAA 90 bp | TCTTGTGTGGTAGGTTCTTCTGGATCTAGAGGAATCTCATGTCCTTTAGAACTGATGCTGCCTTTGCTGTaGTTCACGTTGATGTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: SCVVGSSGSRGISCPLELMLPLL*FTLMFL Trigger: GAGGAACATCAACGTGAACAACAGCAAAGGCAGCAT...CAGTTCTAAAGGACATGAGATTCCTCTAGATCCAGAAGAACCTACCACACAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 |
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| CDS-3UTR CAA 90 bp | GTCTCTTGTGTGGTAGGTTCTTCTGGATCTAGAGGAATCTCATGTCCTTTAGAAGGATCTTCAGACTCCTaGTTCTTCCGACACTTAAAT | + |
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Preference number: 5 (lower is better) Translates to: VSCVVGSSGSRGISCPLEGSSDS*FFRHLN Trigger: ATTTAAGTGTCGGAAGAACAAGGAGTCTGAAGATCC...TTCTAAAGGACATGAGATTCCTCTAGATCCAGAAGAACCTACCACACAAGAGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 ENSMUST00000235163.2 |
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| CDS-3UTR CAA 90 bp | GTAGAATGGACAATCTACCTCATTATTTCCTTAAGTCTTGCTCTATTGACTCCTGCTGACATGCTGCCTTaGCTGTTGTTCACGTTGATG | + |
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Preference number: 5 (lower is better) Translates to: VEWTIYLIISLSLALLTPADMLP*LLFTLM Trigger: CATCAACGTGAACAACAGCAAAGGCAGCATGTCAGC...AGGAGTCAATAGAGCAAGACTTAAGGAAATAATGAGGTAGATTGTCCATTCTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097618.10 ENSMUST00000133064.8 |
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| CDS GCA 72 bp | CTCCTCTCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTaGTCCTTTCTGGGGTTCCTGTGCCAGGTCCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: LLSCCCCCCCCC*SFLGFLCQVPV Trigger: CACTGGGACCTGGCACAGGAACCCCAGAAAGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGAGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000097618.10 ENSMUST00000123973.2 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
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| CDS GCA 72 bp | CTTCTCCTCTCCTGCTGCTGCTGCTGCTGCTGCTGCTaGTGCTCCTTTCTGGGGTTCCTGTGCCAGGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: LLLSCCCCCCCC*CSFLGFLCQVP Trigger: TGGGACCTGGCACAGGAACCCCAGAAAGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGAGGAGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000097618.10 ENSMUST00000123973.2 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
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| CDS CCA 72 bp | GCTGCTGCTGCTGCTGCTGCTGCTGCTGCTCCTTTCTaGGGTTCCTGTGCCAGGTCCCAGTGTGTGCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: AAAAAAAAAAPF*GSCARSQCVLL Trigger: CAGAAGCACACACTGGGACCTGGCACAGGAACCCCAGAAAGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000097618.10 ENSMUST00000123973.2 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
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| CDS GCA 72 bp | CATCCAGAGATGCTTCTCCTCTCCTGCTGCTGCTGCTaGTGCTGCTGCTGCTGCTCCTTTCTGGGGTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: HPEMLLLSCCCC*CCCCCSFLGFL Trigger: CAGGAACCCCAGAAAGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGAGGAGAAGCATCTCTGGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000097618.10 ENSMUST00000123973.2 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
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| CDS TCA 72 bp | CTGTGGGAGTTGATGGGCAAGAAGGGGTGTCAGTGTTaGCCCCAGCCCGTGGGCTTCCAGAGAAATGTCTCG | + |
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Preference number: 6 (lower is better) Translates to: LWELMGKKGCQC*PQPVGFQRNVS Trigger: CGAGACATTTCTCTGGAAGCCCACGGGCTGGGGTCAACACTGACACCCCTTCTTGCCCATCAACTCCCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097618.10 |
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| CDS CAA 72 bp | CCTGTGGGAGTTGATGGGCAAGAAGGGGTGTCAGTGTaGACCCCAGCCCGTGGGCTTCCAGAGAAATGTCTC | + |
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Preference number: 6 (lower is better) Translates to: PVGVDGQEGVSV*TPARGLPEKCL Trigger: GAGACATTTCTCTGGAAGCCCACGGGCTGGGGTCAACACTGACACCCCTTCTTGCCCATCAACTCCCACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097618.10 |
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| CDS CCA 72 bp | TGGGGTTCCTGTGCCAGGTCCCAGTGTGTGCTTCTGTaGCTGGAAGGACATCAAGTCAGGCAAGGAAAGGGA | + |
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Preference number: 6 (lower is better) Translates to: WGSCARSQCVLL*LEGHQVRQGKG Trigger: TCCCTTTCCTTGCCTGACTTGATGTCCTTCCAGCCACAGAAGCACACACTGGGACCTGGCACAGGAACCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000097618.10 ENSMUST00000123973.2 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
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| CDS CCA 72 bp | GTTCCTGTGCCAGGTCCCAGTGTGTGCTTCTGTGGCTaGAAGGACATCAAGTCAGGCAAGGAAAGGGACTGT | + |
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Preference number: 6 (lower is better) Translates to: VPVPGPSVCFCG*KDIKSGKERDC Trigger: ACAGTCCCTTTCCTTGCCTGACTTGATGTCCTTCCAGCCACAGAAGCACACACTGGGACCTGGCACAGGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000097618.10 ENSMUST00000123973.2 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
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| CDS CCA 72 bp | ACATCAAGTCAGGCAAGGAAAGGGACTGTTTATCCATaGTGCTTGACCTTGGTGTCACAGGCTGATTGGATA | + |
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Preference number: 6 (lower is better) Translates to: TSSQARKGTVYP*CLTLVSQADWI Trigger: TATCCAATCAGCCTGTGACACCAAGGTCAAGCACCATGGATAAACAGTCCCTTTCCTTGCCTGACTTGATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000097618.10 ENSMUST00000123973.2 ENSMUST00000133064.8 ENSMUST00000134656.8 ENSMUST00000235163.2 |
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