Pregenerated sensors for ECM2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043631Ensembl transcript IDs: ENSMUST00000051504.8
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTCACTATATAGACCCGGCTGGCCTCATACTCACTGAGATCCTTTaGCCTCTGTCTCACAGCGCTGGGGTTAAAGGCATGTGCCACCAT | + |
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Preference number: 1 (lower is better) Translates to: SHYIDPAGLILTEIL*PLSHSAGVKGMCHH Trigger: ATGGTGGCACATGCCTTTAACCCCAGCGCTGTGAGACAGAGGCCAAAGGATCTCAGTGAGTATGAGGCCAGCCGGGTCTATATAGTGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| 3UTR CCA 90 bp | AACCAAGAAATTAGCATTAGAATGGTGTTTTGGAGACTGGAGACATaGATCAAGCAGTTAAGAACATGTACTGCTCTTACCACATACCCA | + |
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Preference number: 1 (lower is better) Translates to: NQEISIRMVFWRLET*IKQLRTCTALTTYP Trigger: TGGGTATGTGGTAAGAGCAGTACATGTTCTTAACTGCTTGATCCATGTCTCCAGTCTCCAAAACACCATTCTAATGCTAATTTCTTGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| 3UTR-3UTR GCA 90 bp | ATACAGAGATCAAAGATTGCACATGCCTTTAATCCTTGCACCTGGTTAAGTGCCATAAATGGCAGAAGGTaGCGGGCGGTGGTGGCGCAC | + |
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Preference number: 2 (lower is better) Translates to: IQRSKIAHAFNPCTWLSAINGRR*RAVVAH Trigger: GTGCGCCACCACCGCCCGGCACCTTCTGCCATTTAT...GGCACTTAACCAGGTGCAAGGATTAAAGGCATGTGCAATCTTTGATCTCTGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGGCTCAGAACCACTTGTAACTCCAGCTCCAGGGCAACCAACACCTTCTTCTTTTAATCCTAGCACTTaGGAGGCAAAAACAGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: TGSEPLVTPAPGQPTPSSFNPST*EAKTGG Trigger: TCCACCTGTTTTTGCCTCCCAAGTGCTAGGATTAAA...AGAAGAAGGTGTTGGTTGCCCTGGAGCTGGAGTTACAAGTGGTTCTGAGCCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| 3UTR-3UTR GCA 90 bp | CACATACCCAAGTTCATTTTACAGCACACTTATCAACTGGCTCAGAACCACTTGAGCACAGAACTCATGTaGACAAACACATACAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: HIPKFILQHTYQLAQNHLSTELM*TNTYRN Trigger: GTTTCTGTATGTGTTTGTGCACATGAGTTCTGTGCT...CAAGTGGTTCTGAGCCAGTTGATAAGTGTGCTGTAAAATGAACTTGGGTATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| 3UTR CCA 72 bp | ATAGACCCGGCTGGCCTCATACTCACTGAGATCCTTTaGCCTCTGTCTCACAGCGCTGGGGTTAAAGGCATG | + |
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Preference number: 3 (lower is better) Translates to: IDPAGLILTEIL*PLSHSAGVKGM Trigger: CATGCCTTTAACCCCAGCGCTGTGAGACAGAGGCCAAAGGATCTCAGTGAGTATGAGGCCAGCCGGGTCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| 3UTR TCA 72 bp | CCAGCTCCAGGGCAACCAACACCTTCTTCTGGTTACTaGGAGCACAGAACTCATGTGCACAAACACATACAG | + |
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Preference number: 3 (lower is better) Translates to: PAPGQPTPSSGY*EHRTHVHKHIQ Trigger: CTGTATGTGTTTGTGCACATGAGTTCTGTGCTCTCAGTAACCAGAAGAAGGTGTTGGTTGCCCTGGAGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| 3UTR TCA 72 bp | ATCCTAGCACTTGGGAGGCAAAAACAGGTGGATTTCTaGGTTCGAGGCCAGTCTGGTCTACAAAGTGAGTTC | + |
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Preference number: 3 (lower is better) Translates to: ILALGRQKQVDF*VRGQSGLQSEF Trigger: GAACTCACTTTGTAGACCAGACTGGCCTCGAACTCAGAAATCCACCTGTTTTTGCCTCCCAAGTGCTAGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| 3UTR CCA 72 bp | ACATACCCAAGTTCATTTTACAGCACACTTATCAACTaGCTCAGAACCACTTGTAACTCCAGCTCCAGGGCA | + |
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Preference number: 3 (lower is better) Translates to: TYPSSFYSTLIN*LRTTCNSSSRA Trigger: TGCCCTGGAGCTGGAGTTACAAGTGGTTCTGAGCCAGTTGATAAGTGTGCTGTAAAATGAACTTGGGTATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| 3UTR CCA 72 bp | TATTTAAACCAAGAAATTAGCATTAGAATGGTGTTTTaGAGACTGGAGACATGGATCAAGCAGTTAAGAACA | + |
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Preference number: 3 (lower is better) Translates to: YLNQEISIRMVF*RLETWIKQLRT Trigger: TGTTCTTAACTGCTTGATCCATGTCTCCAGTCTCCAAAACACCATTCTAATGCTAATTTCTTGGTTTAAATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS-3UTR CCA 90 bp | AGCTCCAGGGCAACCAACACCTTCTTCTGGTTACTGAGAGCACAGAACTCATGTGCTTCTGGGCAGACGTaGCCTGCCTCTTGGGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: SSRATNTFFWLLRAQNSCASGQT*PASWGS Trigger: GGAACCCCAAGAGGCAGGCCACGTCTGCCCAGAAGC...ACATGAGTTCTGTGCTCTCAGTAACCAGAAGAAGGTGTTGGTTGCCCTGGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS-3UTR TCA 90 bp | TCACTGAGATCCTTTGGCCTCTGTCTCACAGCGCTGGGGTTAAAGGCATGTGCCGCTGCCTGTTGGCTCTaGGGTGGAATGAAGAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: SLRSFGLCLTALGLKACAAACWL*GGMKSF Trigger: AAAGCTCTTCATTCCACCTCAGAGCCAACAGGCAGC...GGCACATGCCTTTAACCCCAGCGCTGTGAGACAGAGGCCAAAGGATCTCAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS-3UTR TCA 90 bp | TCACTGAGATCCTTTGGCCTCTGTCTCACAGCGCTGGGGTTAAAGGCATGTGCCTTCCTGAGTCTTCTCTaGTGCATCCTTCTCCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: SLRSFGLCLTALGLKACAFLSLL*CILLLC Trigger: GCAAAGGAGAAGGATGCATCAGAGAAGACTCAGGAA...GGCACATGCCTTTAACCCCAGCGCTGTGAGACAGAGGCCAAAGGATCTCAGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS-3UTR TCA 90 bp | ACTGGCTCAGAACCACTTGTAACTCCAGCTCCAGGGCAACCAACACCTTCTTCTAAGCACTCTTCCATTTaGGCAGAGGCAGGTGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: TGSEPLVTPAPGQPTPSSKHSSI*AEAGGA Trigger: TGCACCACCTGCCTCTGCTCAAATGGAAGAGTGCTT...AGAAGAAGGTGTTGGTTGCCCTGGAGCTGGAGTTACAAGTGGTTCTGAGCCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS-3UTR TCA 90 bp | ACTGGCTCAGAACCACTTGTAACTCCAGCTCCAGGGCAACCAACACCTTCTTCTAAGATGCTCGAGAGCTaGGTCCTCATCCTCTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: TGSEPLVTPAPGQPTPSSKMLES*VLILFS Trigger: GCTGAAGAGGATGAGGACTCAGCTCTCGAGCATCTT...AGAAGAAGGTGTTGGTTGCCCTGGAGCTGGAGTTACAAGTGGTTCTGAGCCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS-3UTR GCA 90 bp | TCACTGAGATCCTTTGGCCTCTGTCTCACAGCGCTGGGGTTAAAGGCATGTGCCGAGGTCTCTTTCTTGTaGTCCTTGTGTCCTTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: SLRSFGLCLTALGLKACAEVSFL*SLCPSA Trigger: AGCTGAAGGACACAAGGAGCACAAGAAAGAGACCTC...GGCACATGCCTTTAACCCCAGCGCTGTGAGACAGAGGCCAAAGGATCTCAGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS-3UTR CCA 90 bp | AGCTCCAGGGCAACCAACACCTTCTTCTGGTTACTGAGAGCACAGAACTCATGTGGTGCAGAAGAGATTTaGGTAGGTAGGAGGGGACGT | + |
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Preference number: 4 (lower is better) Translates to: SSRATNTFFWLLRAQNSCGAEEI*VGRRGR Trigger: ACGTCCCCTCCTACCTACCCAAATCTCTTCTGCACC...ACATGAGTTCTGTGCTCTCAGTAACCAGAAGAAGGTGTTGGTTGCCCTGGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS-3UTR TCA 90 bp | TCACTGAGATCCTTTGGCCTCTGTCTCACAGCGCTGGGGTTAAAGGCATGTGCCGGTGGCACTTGCTTGTaGAGTTTGTTAATGGATTCT | + |
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Preference number: 4 (lower is better) Translates to: SLRSFGLCLTALGLKACAGGTCL*SLLMDS Trigger: AGAATCCATTAACAAACTTCACAAGCAAGTGCCACC...GGCACATGCCTTTAACCCCAGCGCTGTGAGACAGAGGCCAAAGGATCTCAGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS-3UTR TCA 90 bp | TCACTGAGATCCTTTGGCCTCTGTCTCACAGCGCTGGGGTTAAAGGCATGTGCCCTATGCCCGAAGAAGTaGTATTATTTCTGCTCAGAT | + |
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Preference number: 4 (lower is better) Translates to: SLRSFGLCLTALGLKACALCPKK*YYFCSD Trigger: ATCTGAGCAGAAATAATATCACTTCTTCGGGCATAG...GGCACATGCCTTTAACCCCAGCGCTGTGAGACAGAGGCCAAAGGATCTCAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS-3UTR TCA 90 bp | TCACTGAGATCCTTTGGCCTCTGTCTCACAGCGCTGGGGTTAAAGGCATGTGCCAGAAAGTCTGTTAAATaGCAGGTACAAGTACTCCAG | + |
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Preference number: 4 (lower is better) Translates to: SLRSFGLCLTALGLKACARKSVK*QVQVLQ Trigger: CTGGAGTACTTGTACCTGTCATTTAACAGACTTTCT...GGCACATGCCTTTAACCCCAGCGCTGTGAGACAGAGGCCAAAGGATCTCAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS-3UTR TCA 90 bp | TCACTGAGATCCTTTGGCCTCTGTCTCACAGCGCTGGGGTTAAAGGCATGTGCCCGTTCACAATCAGTTTaGAGAACAATAAGCAGAATG | + |
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Preference number: 4 (lower is better) Translates to: SLRSFGLCLTALGLKACARSQSV*RTISRM Trigger: CATTCTGCTTATTGTTCTTCAAACTGATTGTGAACG...GGCACATGCCTTTAACCCCAGCGCTGTGAGACAGAGGCCAAAGGATCTCAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS-3UTR TCA 90 bp | AGCTCCAGGGCAACCAACACCTTCTTCTGGTTACTGAGAGCACAGAACTCATGTATGAAGAGCTTTTCCTaGGTCTTCTCTGATGCATCC | + |
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Preference number: 4 (lower is better) Translates to: SSRATNTFFWLLRAQNSCMKSFS*VFSDAS Trigger: GGATGCATCAGAGAAGACTCAGGAAAAGCTCTTCAT...ACATGAGTTCTGTGCTCTCAGTAACCAGAAGAAGGTGTTGGTTGCCCTGGAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS-3UTR TCA 90 bp | ATACAGAGATCAAAGATTGCACATGCCTTTAATCCTTGCACCTGGTTAAGTGCCGAGTGGTTGATGTGCTaGCCTCCCTTCTTTCTCCGG | + |
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Preference number: 4 (lower is better) Translates to: IQRSKIAHAFNPCTWLSAEWLMC*PPFFLR Trigger: CCGGAGAAAGAAGGGAGGTCAGCACATCAACCACTC...GGCACTTAACCAGGTGCAAGGATTAAAGGCATGTGCAATCTTTGATCTCTGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS-3UTR TCA 90 bp | CACATACCCAAGTTCATTTTACAGCACACTTATCAACTGGCTCAGAACCACTTGGCAGCAGTGGTTTGCTaGACTTCAAGCTGCCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: HIPKFILQHTYQLAQNHLAAVVC*TSSCLL Trigger: CAACAGGCAGCTTGAAGTTCAGCAAACCACTGCTGC...CAAGTGGTTCTGAGCCAGTTGATAAGTGTGCTGTAAAATGAACTTGGGTATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS-3UTR TCA 90 bp | AGCTCCAGGGCAACCAACACCTTCTTCTGGTTACTGAGAGCACAGAACTCATGTTCATCCTCCTCAGATTaGAGAGCTTCTTTTATGGCT | + |
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Preference number: 4 (lower is better) Translates to: SSRATNTFFWLLRAQNSCSSSSD*RASFMA Trigger: AGCCATAAAAGAAGCTCTTCAATCTGAGGAGGATGA...ACATGAGTTCTGTGCTCTCAGTAACCAGAAGAAGGTGTTGGTTGCCCTGGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS-3UTR CCA 90 bp | TCACTGAGATCCTTTGGCCTCTGTCTCACAGCGCTGGGGTTAAAGGCATGTGCCTTCTCATCGATAGCCTaGAGATTGTTGTCATTTATT | + |
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Preference number: 4 (lower is better) Translates to: SLRSFGLCLTALGLKACAFSSIA*RLLSFI Trigger: AATAAATGACAACAATCTCCAGGCTATCGATGAGAA...GGCACATGCCTTTAACCCCAGCGCTGTGAGACAGAGGCCAAAGGATCTCAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS-3UTR CCA 90 bp | CACATACCCAAGTTCATTTTACAGCACACTTATCAACTGGCTCAGAACCACTTGCAAGTACTCCAGGCCTaGTTGCATGTGGCCAAACAC | + |
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Preference number: 4 (lower is better) Translates to: HIPKFILQHTYQLAQNHLQVLQA*LHVAKH Trigger: GTGTTTGGCCACATGCAACCAGGCCTGGAGTACTTG...CAAGTGGTTCTGAGCCAGTTGATAAGTGTGCTGTAAAATGAACTTGGGTATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS-3UTR TCA 90 bp | TGCCCTTCTGCTAGCTTTCCTTACCATTACCAGTGTGTATATGTAACCACTGTAGGCTCTGAGGTGGAATaGAGAGCTTTTCCTGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: CPSASFPYHYQCVYVTTVGSEVE*RAFPES Trigger: AGACTCAGGAAAAGCTCTTCATTCCACCTCAGAGCC...TACAGTGGTTACATATACACACTGGTAATGGTAAGGAAAGCTAGCAGAAGGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS-3UTR TCA 90 bp | TTGGGAGGCAAAAACAGGTGGATTTCTGAGTTCGAGGCCAGTCTGGTCTACAAACAGCTTTGTTGTACATaGTCATGCCCTTTACAAAGC | + |
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Preference number: 4 (lower is better) Translates to: LGGKNRWISEFEASLVYKQLCCT*SCPLQS Trigger: GCTTTGTAAAGGGCATGATCATGTACAACAAAGCTG...TTTGTAGACCAGACTGGCCTCGAACTCAGAAATCCACCTGTTTTTGCCTCCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS-3UTR CCA 90 bp | TGCCCTTCTGCTAGCTTTCCTTACCATTACCAGTGTGTATATGTAACCACTGTACTTTCCCCATCGCCATaGATCTTAGTAGGCACTGAG | + |
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Preference number: 4 (lower is better) Translates to: CPSASFPYHYQCVYVTTVLSPSP*ILVGTE Trigger: CTCAGTGCCTACTAAGATCCATGGCGATGGGGAAAG...TACAGTGGTTACATATACACACTGGTAATGGTAAGGAAAGCTAGCAGAAGGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS-3UTR GCA 90 bp | TGCCCTTCTGCTAGCTTTCCTTACCATTACCAGTGTGTATATGTAACCACTGTATGCATCCTTCTCCTTTaGCTCCTAGTACCTCGTTCA | + |
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Preference number: 4 (lower is better) Translates to: CPSASFPYHYQCVYVTTVCILLL*LLVPRS Trigger: TGAACGAGGTACTAGGAGGCAAAGGAGAAGGATGCA...TACAGTGGTTACATATACACACTGGTAATGGTAAGGAAAGCTAGCAGAAGGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS-3UTR CCA 90 bp | ATACAGAGATCAAAGATTGCACATGCCTTTAATCCTTGCACCTGGTTAAGTGCCCTGTTGGCTCTGAGGTaGAATGAAGAGCTTTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: IQRSKIAHAFNPCTWLSALLALR*NEELFL Trigger: CAGGAAAAGCTCTTCATTCCACCTCAGAGCCAACAG...GGCACTTAACCAGGTGCAAGGATTAAAGGCATGTGCAATCTTTGATCTCTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS-3UTR CCA 90 bp | ATACAGAGATCAAAGATTGCACATGCCTTTAATCCTTGCACCTGGTTAAGTGCCCATCTGGAGCAGCAGTaGTTTGCTGAACTTCAAGCT | + |
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Preference number: 4 (lower is better) Translates to: IQRSKIAHAFNPCTWLSAHLEQQ*FAELQA Trigger: AGCTTGAAGTTCAGCAAACCACTGCTGCTCCAGATG...GGCACTTAACCAGGTGCAAGGATTAAAGGCATGTGCAATCTTTGATCTCTGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS-3UTR GCA 90 bp | ATACAGAGATCAAAGATTGCACATGCCTTTAATCCTTGCACCTGGTTAAGTGCCGTTCGTTACTTCTGGTaGTGTTATTGGTGGGATCTC | + |
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Preference number: 4 (lower is better) Translates to: IQRSKIAHAFNPCTWLSAVRYFW*CYWWDL Trigger: GAGATCCCACCAATAACAGCACCAGAAGTAACGAAC...GGCACTTAACCAGGTGCAAGGATTAAAGGCATGTGCAATCTTTGATCTCTGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS-3UTR CCA 90 bp | ATACAGAGATCAAAGATTGCACATGCCTTTAATCCTTGCACCTGGTTAAGTGCCTTCTGGTGCTGTTATTaGTGGGATCTCAGTGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: IQRSKIAHAFNPCTWLSAFWCCY*WDLSEV Trigger: GACTTCACTGAGATCCCACCAATAACAGCACCAGAA...GGCACTTAACCAGGTGCAAGGATTAAAGGCATGTGCAATCTTTGATCTCTGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS-3UTR GCA 90 bp | CACATACCCAAGTTCATTTTACAGCACACTTATCAACTGGCTCAGAACCACTTGCTTCAAAGACTTGAATaGTTTTGGACCTATGCCCGA | + |
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Preference number: 4 (lower is better) Translates to: HIPKFILQHTYQLAQNHLLQRLE*FWTYAR Trigger: TCGGGCATAGGTCCAAAAGCATTCAAGTCTTTGAAG...CAAGTGGTTCTGAGCCAGTTGATAAGTGTGCTGTAAAATGAACTTGGGTATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS-3UTR CCA 90 bp | TGCCCTTCTGCTAGCTTTCCTTACCATTACCAGTGTGTATATGTAACCACTGTAAGACTTGAATGCTTTTaGACCTATGCCCGAAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: CPSASFPYHYQCVYVTTVRLECF*TYARRS Trigger: ACTTCTTCGGGCATAGGTCCAAAAGCATTCAAGTCT...TACAGTGGTTACATATACACACTGGTAATGGTAAGGAAAGCTAGCAGAAGGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS-3UTR TCA 90 bp | ATACAGAGATCAAAGATTGCACATGCCTTTAATCCTTGCACCTGGTTAAGTGCCACTTCTTCAAAGACTTaGATGCTTTTGGACCTATGC | + |
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Preference number: 4 (lower is better) Translates to: IQRSKIAHAFNPCTWLSATSSKT*MLLDLC Trigger: GCATAGGTCCAAAAGCATTCAAGTCTTTGAAGAAGT...GGCACTTAACCAGGTGCAAGGATTAAAGGCATGTGCAATCTTTGATCTCTGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS-3UTR GCA 90 bp | TGCCCTTCTGCTAGCTTTCCTTACCATTACCAGTGTGTATATGTAACCACTGTACCTCAGAAAATGCAGTaGTTTCATGTCTTGTATTCC | + |
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Preference number: 4 (lower is better) Translates to: CPSASFPYHYQCVYVTTVPQKMQ*FHVLYS Trigger: GGAATACAAGACATGAAAGCACTGCATTTTCTGAGG...TACAGTGGTTACATATACACACTGGTAATGGTAAGGAAAGCTAGCAGAAGGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS-3UTR GCA 90 bp | TGCCCTTCTGCTAGCTTTCCTTACCATTACCAGTGTGTATATGTAACCACTGTATTCAGCCTCAGAAAATaGAGTGCTTTCATGTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: CPSASFPYHYQCVYVTTVFSLRK*SAFMSC Trigger: ACAAGACATGAAAGCACTGCATTTTCTGAGGCTGAA...TACAGTGGTTACATATACACACTGGTAATGGTAAGGAAAGCTAGCAGAAGGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS-3UTR CCA 90 bp | TGCCCTTCTGCTAGCTTTCCTTACCATTACCAGTGTGTATATGTAACCACTGTAGAAGAGCTTCTTTTATaGCTACTTGGTCCATTTCCA | + |
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Preference number: 4 (lower is better) Translates to: CPSASFPYHYQCVYVTTVEELLL*LLGPFP Trigger: TGGAAATGGACCAAGTAGCCATAAAAGAAGCTCTTC...TACAGTGGTTACATATACACACTGGTAATGGTAAGGAAAGCTAGCAGAAGGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS-3UTR CCA 90 bp | CACATACCCAAGTTCATTTTACAGCACACTTATCAACTGGCTCAGAACCACTTGGTCTTGTATTCCAGGTaGTATAGATTTGAAGTCATT | + |
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Preference number: 4 (lower is better) Translates to: HIPKFILQHTYQLAQNHLVLYSR*YRFEVI Trigger: AATGACTTCAAATCTATACCACCTGGAATACAAGAC...CAAGTGGTTCTGAGCCAGTTGATAAGTGTGCTGTAAAATGAACTTGGGTATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS CCA 90 bp | GCAGCTGATAGTCCTGTAGGACAGGGAACAGCTTCTGGGCAGACGTaGCCTGCCTCTTGGGGTTCCAGGAATTACCCGGGAGGACATTCT | + |
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Preference number: 5 (lower is better) Translates to: AADSPVGQGTASGQT*PASWGSRNYPGGHS Trigger: AGAATGTCCTCCCGGGTAATTCCTGGAACCCCAAGAGGCAGGCCACGTCTGCCCAGAAGCTGTTCCCTGTCCTACAGGACTATCAGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS TCA 90 bp | CGCCTTGGGGTGGCACTCGGTTTCATCACAAAGCACTCTTCCATTTaGGCAGAGGCAGGTGGTGCAGGGCTCAGGAGACCAGACAGCTTT | + |
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Preference number: 5 (lower is better) Translates to: RLGVALGFITKHSSI*AEAGGAGLRRPDSF Trigger: AAAGCTGTCTGGTCTCCTGAGCCCTGCACCACCTGCCTCTGCTCAAATGGAAGAGTGCTTTGTGATGAAACCGAGTGCCACCCCAAGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS TCA 90 bp | GAGTTGGCAGTGGGTAGTCTAGCATCTGGAGCAGCAGTGGTTTGCTaGACTTCAAGCTGCCTGTTGGCTCTGAGGTGGAATGAAGAGCTT | + |
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Preference number: 5 (lower is better) Translates to: ELAVGSLASGAAVVC*TSSCLLALRWNEEL Trigger: AAGCTCTTCATTCCACCTCAGAGCCAACAGGCAGCTTGAAGTTCAGCAAACCACTGCTGCTCCAGATGCTAGACTACCCACTGCCAACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS TCA 90 bp | GCTCTCCTCTTCCTCCCTTCTTCCATGGTAGAGTGGTTGATGTGCTaGCCTCCCTTCTTTCTCCGGCCTCAGTTTTCTCTCAGTTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: ALLFLPSSMVEWLMC*PPFFLRPQFSLSSF Trigger: GAAAGAACTGAGAGAAAACTGAGGCCGGAGAAAGAAGGGAGGTCAGCACATCAACCACTCTACCATGGAAGAAGGGAGGAAGAGGAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS-3UTR CAA 90 bp | TTGGGAGGCAAAAACAGGTGGATTTCTGAGTTCGAGGCCAGTCTGGTCTACAAATGGAGCAGCAGTGGTTaGCTGAACTTCAAGCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LGGKNRWISEFEASLVYKWSSSG*LNFKLP Trigger: AGGCAGCTTGAAGTTCAGCAAACCACTGCTGCTCCA...TTTGTAGACCAGACTGGCCTCGAACTCAGAAATCCACCTGTTTTTGCCTCCCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS-3UTR CAA 90 bp | TCACTGAGATCCTTTGGCCTCTGTCTCACAGCGCTGGGGTTAAAGGCATGTGCCTTCATCCTCCTCAGATaGAAGAGCTTCTTTTATGGC | + |
|
Preference number: 5 (lower is better) Translates to: SLRSFGLCLTALGLKACAFILLR*KSFFYG Trigger: GCCATAAAAGAAGCTCTTCAATCTGAGGAGGATGAA...GGCACATGCCTTTAACCCCAGCGCTGTGAGACAGAGGCCAAAGGATCTCAGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS-3UTR CAA 90 bp | ATACAGAGATCAAAGATTGCACATGCCTTTAATCCTTGCACCTGGTTAAGTGCCGACGTGGCCTGCCTCTaGGGGTTCCAGGAATTACCC | + |
|
Preference number: 5 (lower is better) Translates to: IQRSKIAHAFNPCTWLSADVACL*GFQELP Trigger: GGGTAATTCCTGGAACCCCAAGAGGCAGGCCACGTC...GGCACTTAACCAGGTGCAAGGATTAAAGGCATGTGCAATCTTTGATCTCTGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS GCA 90 bp | GTTCGTTACTTCTGGTGCTGTTATTGGTGGGATCTCAGTGAAGTCTaGATGAACGCAGCTGATAGTCCTGTAGGACAGGGAACAGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VRYFWCCYWWDLSEV*MNAADSPVGQGTAS Trigger: AGAAGCTGTTCCCTGTCCTACAGGACTATCAGCTGCGTTCATGCAGACTTCACTGAGATCCCACCAATAACAGCACCAGAAGTAACGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS CCA 90 bp | TCTTTCTCCGGCCTCAGTTTTCTCTCAGTTCTTTCCCCATCGCCATaGATCTTAGTAGGCACTGAGGTCTCTTTCTTGTGCTCCTTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SFSGLSFLSVLSPSP*ILVGTEVSFLCSLC Trigger: ACACAAGGAGCACAAGAAAGAGACCTCAGTGCCTACTAAGATCCATGGCGATGGGGAAAGAACTGAGAGAAAACTGAGGCCGGAGAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS TCA 90 bp | AGTGGTTTGCTGAACTTCAAGCTGCCTGTTGGCTCTGAGGTGGAATaGAGAGCTTTTCCTGAGTCTTCTCTGATGCATCCTTCTCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SGLLNFKLPVGSEVE*RAFPESSLMHPSPL Trigger: CAAAGGAGAAGGATGCATCAGAGAAGACTCAGGAAAAGCTCTTCATTCCACCTCAGAGCCAACAGGCAGCTTGAAGTTCAGCAAACCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS TCA 90 bp | GGCAGGTGGTGCAGGGCTCAGGAGACCAGACAGCTTTGTTGTACATaGTCATGCCCTTTACAAAGCAGTATCCTTTCTTTCCTGGTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: GRWCRAQETRQLCCT*SCPLQSSILSFLVK Trigger: TTTTACCAGGAAAGAAAGGATACTGCTTTGTAAAGGGCATGATCATGTACAACAAAGCTGTCTGGTCTCCTGAGCCCTGCACCACCTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS-3UTR CAA 90 bp | TCACTGAGATCCTTTGGCCTCTGTCTCACAGCGCTGGGGTTAAAGGCATGTGCCTTTGTTAATGGATTCTaGTTCAGCATCAGAGCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SLRSFGLCLTALGLKACAFVNGF*FSIRAD Trigger: ATCTGCTCTGATGCTGAACAAGAATCCATTAACAAA...GGCACATGCCTTTAACCCCAGCGCTGTGAGACAGAGGCCAAAGGATCTCAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS-3UTR CAA 90 bp | AGCTCCAGGGCAACCAACACCTTCTTCTGGTTACTGAGAGCACAGAACTCATGTTCTTTCTTGTGCTCCTaGTGTCCTTCAGCTATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSRATNTFFWLLRAQNSCSFLCS*CPSAIS Trigger: AGAGATAGCTGAAGGACACAAGGAGCACAAGAAAGA...ACATGAGTTCTGTGCTCTCAGTAACCAGAAGAAGGTGTTGGTTGCCCTGGAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS TCA 90 bp | TTTTCTCTCAGTTCTTTCCCCATCGCCATGGATCTTAGTAGGCACTaGGGTCTCTTTCTTGTGCTCCTTGTGTCCTTCAGCTATCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FSLSSFPIAMDLSRH*GLFLVLLVSFSYLF Trigger: GAAGAGATAGCTGAAGGACACAAGGAGCACAAGAAAGAGACCTCAGTGCCTACTAAGATCCATGGCGATGGGGAAAGAACTGAGAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS CCA 90 bp | AATGGAGATGATCGAATTCCCAACCAACTCCAGGTTCGTTACTTCTaGTGCTGTTATTGGTGGGATCTCAGTGAAGTCTGCATGAACGCA | + |
|
Preference number: 5 (lower is better) Translates to: NGDDRIPNQLQVRYF*CCYWWDLSEVCMNA Trigger: TGCGTTCATGCAGACTTCACTGAGATCCCACCAATAACAGCACCAGAAGTAACGAACCTGGAGTTGGTTGGGAATTCGATCATCTCCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS-3UTR CAA 90 bp | CACATACCCAAGTTCATTTTACAGCACACTTATCAACTGGCTCAGAACCACTTGAAAGCACTCTTCCATTaGAGCAGAGGCAGGTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: HIPKFILQHTYQLAQNHLKALFH*SRGRWC Trigger: GCACCACCTGCCTCTGCTCAAATGGAAGAGTGCTTT...CAAGTGGTTCTGAGCCAGTTGATAAGTGTGCTGTAAAATGAACTTGGGTATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS-3UTR CAA 90 bp | TGCCCTTCTGCTAGCTTTCCTTACCATTACCAGTGTGTATATGTAACCACTGTAGTACTCCAGGCCTGGTaGCATGTGGCCAAACACATA | + |
|
Preference number: 5 (lower is better) Translates to: CPSASFPYHYQCVYVTTVVLQAW*HVAKHI Trigger: TATGTGTTTGGCCACATGCAACCAGGCCTGGAGTAC...TACAGTGGTTACATATACACACTGGTAATGGTAAGGAAAGCTAGCAGAAGGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS-3UTR CAA 90 bp | ACTGGCTCAGAACCACTTGTAACTCCAGCTCCAGGGCAACCAACACCTTCTTCTTTCCGAATCTTATTGTaGTTCAGCCTCAGAAAATGC | + |
|
Preference number: 5 (lower is better) Translates to: TGSEPLVTPAPGQPTPSSFRILL*FSLRKC Trigger: GCATTTTCTGAGGCTGAACAACAATAAGATTCGGAA...AGAAGAAGGTGTTGGTTGCCCTGGAGCTGGAGTTACAAGTGGTTCTGAGCCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS CCA 90 bp | CTTCAGCTATCTCTTCATCCTCCTCAGATTGAAGAGCTTCTTTTATaGCTACTTGGTCCATTTCCATCTGAGGAGGTGGCACTTGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LQLSLHPPQIEELLL*LLGPFPSEEVALAC Trigger: ACAAGCAAGTGCCACCTCCTCAGATGGAAATGGACCAAGTAGCCATAAAAGAAGCTCTTCAATCTGAGGAGGATGAAGAGATAGCTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS-3UTR CAA 90 bp | TGCCCTTCTGCTAGCTTTCCTTACCATTACCAGTGTGTATATGTAACCACTGTAATGCATCCTTCTCCTTaGCCTCCTAGTACCTCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: CPSASFPYHYQCVYVTTVMHPSP*PPSTSF Trigger: GAACGAGGTACTAGGAGGCAAAGGAGAAGGATGCAT...TACAGTGGTTACATATACACACTGGTAATGGTAAGGAAAGCTAGCAGAAGGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS-3UTR CAA 90 bp | ATACAGAGATCAAAGATTGCACATGCCTTTAATCCTTGCACCTGGTTAAGTGCCGGAGACCAGACAGCTTaGTTGTACATGATCATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: IQRSKIAHAFNPCTWLSAGDQTA*LYMIMP Trigger: GGGCATGATCATGTACAACAAAGCTGTCTGGTCTCC...GGCACTTAACCAGGTGCAAGGATTAAAGGCATGTGCAATCTTTGATCTCTGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS-3UTR CAA 90 bp | ACTGGCTCAGAACCACTTGTAACTCCAGCTCCAGGGCAACCAACACCTTCTTCTGGTATGATTCTAAATTaGTTTCTTCCCAGACGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: TGSEPLVTPAPGQPTPSSGMILN*FLPRRR Trigger: TCTACGTCTGGGAAGAAACAAATTTAGAATCATACC...AGAAGAAGGTGTTGGTTGCCCTGGAGCTGGAGTTACAAGTGGTTCTGAGCCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS-3UTR CAA 90 bp | AGCTCCAGGGCAACCAACACCTTCTTCTGGTTACTGAGAGCACAGAACTCATGTAGAAGCAGGAAGACCTaGTGGTATGATTCTAAATTT | + |
|
Preference number: 5 (lower is better) Translates to: SSRATNTFFWLLRAQNSCRSRKT*WYDSKF Trigger: AAATTTAGAATCATACCACAAGGTCTTCCTGCTTCT...ACATGAGTTCTGTGCTCTCAGTAACCAGAAGAAGGTGTTGGTTGCCCTGGAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS-3UTR CAA 90 bp | TGCCCTTCTGCTAGCTTTCCTTACCATTACCAGTGTGTATATGTAACCACTGTACTGAGGAGGTGGCACTaGCTTGTGAAGTTTGTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: CPSASFPYHYQCVYVTTVLRRWH*LVKFVN Trigger: ATTAACAAACTTCACAAGCAAGTGCCACCTCCTCAG...TACAGTGGTTACATATACACACTGGTAATGGTAAGGAAAGCTAGCAGAAGGGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS-3UTR CAA 90 bp | ATACAGAGATCAAAGATTGCACATGCCTTTAATCCTTGCACCTGGTTAAGTGCCGCTAGAGGGTCGACATaGATTTCACTGAGATTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: IQRSKIAHAFNPCTWLSAARGST*ISLRLF Trigger: AAACAATCTCAGTGAAATCAATGTCGACCCTCTAGC...GGCACTTAACCAGGTGCAAGGATTAAAGGCATGTGCAATCTTTGATCTCTGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS-3UTR CAA 90 bp | CACATACCCAAGTTCATTTTACAGCACACTTATCAACTGGCTCAGAACCACTTGCAGTGCTTTCATGTCTaGTATTCCAGGTGGTATAGA | + |
|
Preference number: 5 (lower is better) Translates to: HIPKFILQHTYQLAQNHLQCFHV*YSRWYR Trigger: TCTATACCACCTGGAATACAAGACATGAAAGCACTG...CAAGTGGTTCTGAGCCAGTTGATAAGTGTGCTGTAAAATGAACTTGGGTATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS-3UTR CAA 90 bp | ATACAGAGATCAAAGATTGCACATGCCTTTAATCCTTGCACCTGGTTAAGTGCCTTCAGCATTGCAGATTaGCTCAGGATGAATATTCCG | + |
|
Preference number: 5 (lower is better) Translates to: IQRSKIAHAFNPCTWLSAFSIAD*LRMNIP Trigger: CGGAATATTCATCCTGAGCAAATCTGCAATGCTGAA...GGCACTTAACCAGGTGCAAGGATTAAAGGCATGTGCAATCTTTGATCTCTGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS-3UTR CAA 90 bp | CACATACCCAAGTTCATTTTACAGCACACTTATCAACTGGCTCAGAACCACTTGAACTTCTTCAAAGACTaGAATGCTTTTGGACCTATG | + |
|
Preference number: 5 (lower is better) Translates to: HIPKFILQHTYQLAQNHLNFFKD*NAFGPM Trigger: CATAGGTCCAAAAGCATTCAAGTCTTTGAAGAAGTT...CAAGTGGTTCTGAGCCAGTTGATAAGTGTGCTGTAAAATGAACTTGGGTATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS TCA 90 bp | TCTAGTTCTAATATAATTGTTTTCAAGATGAAGATGCTCGAGAGCTaGGTCCTCATCCTCTTCAGCATTGCAGATTTGCTCAGGATGAAT | + |
|
Preference number: 5 (lower is better) Translates to: SSSNIIVFKMKMLES*VLILFSIADLLRMN Trigger: ATTCATCCTGAGCAAATCTGCAATGCTGAAGAGGATGAGGACTCAGCTCTCGAGCATCTTCATCTTGAAAACAATTATATTAGAACTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS CCA 90 bp | AATTTGTTTCTTCCCAGACGTAGATACGATAGACTTTCCAAAGATTaGAAAGCTAGAGGGTCGACATTGATTTCACTGAGATTGTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: NLFLPRRRYDRLSKD*KARGSTLISLRLFP Trigger: AGGAAACAATCTCAGTGAAATCAATGTCGACCCTCTAGCTTTCCAATCTTTGGAAAGTCTATCGTATCTACGTCTGGGAAGAAACAAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS GCA 72 bp | TGTAGGACAGGGAACAGCTTCTGGGCAGACGTGGCCTaGCTCTTGGGGTTCCAGGAATTACCCGGGAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: CRTGNSFWADVA*LLGFQELPGRT Trigger: TGTCCTCCCGGGTAATTCCTGGAACCCCAAGAGGCAGGCCACGTCTGCCCAGAAGCTGTTCCCTGTCCTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS CCA 72 bp | AGTCCTGTAGGACAGGGAACAGCTTCTGGGCAGACGTaGCCTGCCTCTTGGGGTTCCAGGAATTACCCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SPVGQGTASGQT*PASWGSRNYPG Trigger: TCCCGGGTAATTCCTGGAACCCCAAGAGGCAGGCCACGTCTGCCCAGAAGCTGTTCCCTGTCCTACAGGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS CCA 72 bp | CAGGGAACAGCTTCTGGGCAGACGTGGCCTGCCTCTTaGGGTTCCAGGAATTACCCGGGAGGACATTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: QGTASGQTWPAS*GSRNYPGGHSE Trigger: TTCAGAATGTCCTCCCGGGTAATTCCTGGAACCCCAAGAGGCAGGCCACGTCTGCCCAGAAGCTGTTCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS CAA 90 bp | ACGCCTTGGGGTGGCACTCGGTTTCATCACAAAGCACTCTTCCATTaGAGCAGAGGCAGGTGGTGCAGGGCTCAGGAGACCAGACAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: TPWGGTRFHHKALFH*SRGRWCRAQETRQL Trigger: AAGCTGTCTGGTCTCCTGAGCCCTGCACCACCTGCCTCTGCTCAAATGGAAGAGTGCTTTGTGATGAAACCGAGTGCCACCCCAAGGCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS TCA 72 bp | GTGGGTAGTCTAGCATCTGGAGCAGCAGTGGTTTGCTaGACTTCAAGCTGCCTGTTGGCTCTGAGGTGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: VGSLASGAAVVC*TSSCLLALRWN Trigger: ATTCCACCTCAGAGCCAACAGGCAGCTTGAAGTTCAGCAAACCACTGCTGCTCCAGATGCTAGACTACCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS TCA 72 bp | TTCCTCCCTTCTTCCATGGTAGAGTGGTTGATGTGCTaGCCTCCCTTCTTTCTCCGGCCTCAGTTTTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: FLPSSMVEWLMC*PPFFLRPQFSL Trigger: GAGAGAAAACTGAGGCCGGAGAAAGAAGGGAGGTCAGCACATCAACCACTCTACCATGGAAGAAGGGAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS CAA 90 bp | GAGCAGAGGCAGGTGGTGCAGGGCTCAGGAGACCAGACAGCTTTGTaGTACATGATCATGCCCTTTACAAAGCAGTATCCTTTCTTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: EQRQVVQGSGDQTAL*YMIMPFTKQYPFFP Trigger: AGGAAAGAAAGGATACTGCTTTGTAAAGGGCATGATCATGTACAACAAAGCTGTCTGGTCTCCTGAGCCCTGCACCACCTGCCTCTGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS GCA 72 bp | TTCTGGTGCTGTTATTGGTGGGATCTCAGTGAAGTCTaGATGAACGCAGCTGATAGTCCTGTAGGACAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: FWCCYWWDLSEV*MNAADSPVGQG Trigger: TCCCTGTCCTACAGGACTATCAGCTGCGTTCATGCAGACTTCACTGAGATCCCACCAATAACAGCACCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS CAA 72 bp | CAGGTGGTGCAGGGCTCAGGAGACCAGACAGCTTTGTaGTACATGATCATGCCCTTTACAAAGCAGTATCCT | + |
|
Preference number: 6 (lower is better) Translates to: QVVQGSGDQTAL*YMIMPFTKQYP Trigger: AGGATACTGCTTTGTAAAGGGCATGATCATGTACAACAAAGCTGTCTGGTCTCCTGAGCCCTGCACCACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS CAA 72 bp | AGGCAGGTGGTGCAGGGCTCAGGAGACCAGACAGCTTaGTTGTACATGATCATGCCCTTTACAAAGCAGTAT | + |
|
Preference number: 6 (lower is better) Translates to: RQVVQGSGDQTA*LYMIMPFTKQY Trigger: ATACTGCTTTGTAAAGGGCATGATCATGTACAACAAAGCTGTCTGGTCTCCTGAGCCCTGCACCACCTGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS TCA 72 bp | CTGAACTTCAAGCTGCCTGTTGGCTCTGAGGTGGAATaGAGAGCTTTTCCTGAGTCTTCTCTGATGCATCCT | + |
|
Preference number: 6 (lower is better) Translates to: LNFKLPVGSEVE*RAFPESSLMHP Trigger: AGGATGCATCAGAGAAGACTCAGGAAAAGCTCTTCATTCCACCTCAGAGCCAACAGGCAGCTTGAAGTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS CCA 72 bp | CAACTCCAGGTTCGTTACTTCTGGTGCTGTTATTGGTaGGATCTCAGTGAAGTCTGCATGAACGCAGCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: QLQVRYFWCCYW*DLSEVCMNAAD Trigger: ATCAGCTGCGTTCATGCAGACTTCACTGAGATCCCACCAATAACAGCACCAGAAGTAACGAACCTGGAGTTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS CCA 72 bp | GATCGAATTCCCAACCAACTCCAGGTTCGTTACTTCTaGTGCTGTTATTGGTGGGATCTCAGTGAAGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: DRIPNQLQVRYF*CCYWWDLSEVC Trigger: GCAGACTTCACTGAGATCCCACCAATAACAGCACCAGAAGTAACGAACCTGGAGTTGGTTGGGAATTCGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS CAA 72 bp | AGGTGGCACTTGCTTGTGAAGTTTGTTAATGGATTCTaGTTCAGCATCAGAGCAGATGGGGCAGCACTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RWHLLVKFVNGF*FSIRADGAALS Trigger: GGAGAGTGCTGCCCCATCTGCTCTGATGCTGAACAAGAATCCATTAACAAACTTCACAAGCAAGTGCCACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS CAA 90 bp | TTTGAGCAGAGGCAGGTGGTGCAGGGCTCAGGAGACCAGACAGCTTaGTTGTACATGATCATGCCCTTTACAAAGCAGTATCCTTTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: FEQRQVVQGSGDQTA*LYMIMPFTKQYPFF Trigger: AAAGAAAGGATACTGCTTTGTAAAGGGCATGATCATGTACAACAAAGCTGTCTGGTCTCCTGAGCCCTGCACCACCTGCCTCTGCTCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS TCA 72 bp | TGCAGGGCTCAGGAGACCAGACAGCTTTGTTGTACATaGTCATGCCCTTTACAAAGCAGTATCCTTTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: CRAQETRQLCCT*SCPLQSSILSF Trigger: GAAAGAAAGGATACTGCTTTGTAAAGGGCATGATCATGTACAACAAAGCTGTCTGGTCTCCTGAGCCCTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS CCA 72 bp | TCTCTTCATCCTCCTCAGATTGAAGAGCTTCTTTTATaGCTACTTGGTCCATTTCCATCTGAGGAGGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SLHPPQIEELLL*LLGPFPSEEVA Trigger: TGCCACCTCCTCAGATGGAAATGGACCAAGTAGCCATAAAAGAAGCTCTTCAATCTGAGGAGGATGAAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS CAA 72 bp | GCTTTTCCTGAGTCTTCTCTGATGCATCCTTCTCCTTaGCCTCCTAGTACCTCGTTCACAATCAGTTTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: AFPESSLMHPSP*PPSTSFTISLK Trigger: CTTCAAACTGATTGTGAACGAGGTACTAGGAGGCAAAGGAGAAGGATGCATCAGAGAAGACTCAGGAAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS CAA 72 bp | GGCTACTTGGTCCATTTCCATCTGAGGAGGTGGCACTaGCTTGTGAAGTTTGTTAATGGATTCTTGTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GYLVHFHLRRWH*LVKFVNGFLFS Trigger: GCTGAACAAGAATCCATTAACAAACTTCACAAGCAAGTGCCACCTCCTCAGATGGAAATGGACCAAGTAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS CAA 90 bp | TATCTCTTCATCCTCCTCAGATTGAAGAGCTTCTTTTATGGCTACTaGGTCCATTTCCATCTGAGGAGGTGGCACTTGCTTGTGAAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: YLFILLRLKSFFYGY*VHFHLRRWHLLVKF Trigger: AAACTTCACAAGCAAGTGCCACCTCCTCAGATGGAAATGGACCAAGTAGCCATAAAAGAAGCTCTTCAATCTGAGGAGGATGAAGAGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
||
| CDS CCA 72 bp | CTTCCCAGACGTAGATACGATAGACTTTCCAAAGATTaGAAAGCTAGAGGGTCGACATTGATTTCACTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LPRRRYDRLSKD*KARGSTLISLR Trigger: TCTCAGTGAAATCAATGTCGACCCTCTAGCTTTCCAATCTTTGGAAAGTCTATCGTATCTACGTCTGGGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS CAA 90 bp | TTCTTTTATGGCTACTTGGTCCATTTCCATCTGAGGAGGTGGCACTaGCTTGTGAAGTTTGTTAATGGATTCTTGTTCAGCATCAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: FFYGYLVHFHLRRWH*LVKFVNGFLFSIRA Trigger: TGCTCTGATGCTGAACAAGAATCCATTAACAAACTTCACAAGCAAGTGCCACCTCCTCAGATGGAAATGGACCAAGTAGCCATAAAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS CCA 72 bp | TTTTATGGCTACTTGGTCCATTTCCATCTGAGGAGGTaGCACTTGCTTGTGAAGTTTGTTAATGGATTCTTG | + |
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Preference number: 6 (lower is better) Translates to: FYGYLVHFHLRR*HLLVKFVNGFL Trigger: CAAGAATCCATTAACAAACTTCACAAGCAAGTGCCACCTCCTCAGATGGAAATGGACCAAGTAGCCATAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS CAA 90 bp | AACTCCTCAGTAGAAGCAGGAAGACCTTGTGGTATGATTCTAAATTaGTTTCTTCCCAGACGTAGATACGATAGACTTTCCAAAGATTGG | + |
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Preference number: 6 (lower is better) Translates to: NSSVEAGRPCGMILN*FLPRRRYDRLSKDW Trigger: CCAATCTTTGGAAAGTCTATCGTATCTACGTCTGGGAAGAAACAAATTTAGAATCATACCACAAGGTCTTCCTGCTTCTACTGAGGAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS CAA 72 bp | GTAGAAGCAGGAAGACCTTGTGGTATGATTCTAAATTaGTTTCTTCCCAGACGTAGATACGATAGACTTTCC | + |
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Preference number: 6 (lower is better) Translates to: VEAGRPCGMILN*FLPRRRYDRLS Trigger: GGAAAGTCTATCGTATCTACGTCTGGGAAGAAACAAATTTAGAATCATACCACAAGGTCTTCCTGCTTCTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS CAA 72 bp | GTTGTTCAGCCTCAGAAAATGCAGTGCTTTCATGTCTaGTATTCCAGGTGGTATAGATTTGAAGTCATTGTG | + |
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Preference number: 6 (lower is better) Translates to: VVQPQKMQCFHV*YSRWYRFEVIV Trigger: CACAATGACTTCAAATCTATACCACCTGGAATACAAGACATGAAAGCACTGCATTTTCTGAGGCTGAACAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS CAA 90 bp | AGATACGATAGACTTTCCAAAGATTGGAAAGCTAGAGGGTCGACATaGATTTCACTGAGATTGTTTCCTTCCAATTCTAAAGTGACAAGT | + |
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Preference number: 6 (lower is better) Translates to: RYDRLSKDWKARGST*ISLRLFPSNSKVTS Trigger: ACTTGTCACTTTAGAATTGGAAGGAAACAATCTCAGTGAAATCAATGTCGACCCTCTAGCTTTCCAATCTTTGGAAAGTCTATCGTATCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS GCA 72 bp | ATATTCCGAATCTTATTGTTGTTCAGCCTCAGAAAATaGAGTGCTTTCATGTCTTGTATTCCAGGTGGTATA | + |
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Preference number: 6 (lower is better) Translates to: IFRILLLFSLRK*SAFMSCIPGGI Trigger: TATACCACCTGGAATACAAGACATGAAAGCACTGCATTTTCTGAGGCTGAACAACAATAAGATTCGGAATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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| CDS CAA 72 bp | AGACTTTCCAAAGATTGGAAAGCTAGAGGGTCGACATaGATTTCACTGAGATTGTTTCCTTCCAATTCTAAA | + |
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Preference number: 6 (lower is better) Translates to: RLSKDWKARGST*ISLRLFPSNSK Trigger: TTTAGAATTGGAAGGAAACAATCTCAGTGAAATCAATGTCGACCCTCTAGCTTTCCAATCTTTGGAAAGTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051504.8 |
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