Pregenerated sensors for ECI3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021416Ensembl transcript IDs: ENSMUST00000021853.12, ENSMUST00000164155.2
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CACTCTCCTCGTAACTGCTATGCTAGGAATAACAAGGGCACAGAGGAGTCTGTGGACTGGGACTCTCAGTaGATGCCCGCTCTGGTGGTC | + |
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Preference number: 2 (lower is better) Translates to: HSPRNCYARNNKGTEESVDWDSQ*MPALVV Trigger: GACCACCAGAGCGGGCATGCACTGAGAGTCCCAGTC...CACAGACTCCTCTGTGCCCTTGTTATTCCTAGCATAGCAGTTACGAGGAGAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021853.12 |
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| CDS-3UTR CCA 90 bp | GCTAGGAATAACAAGGGCACAGAGGAGTCTGTGTCATTGAAGCTCCTGAGACTGGCTCCACGCTTTCCCTaGCTCGGGGCTTCAGATGAG | + |
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Preference number: 4 (lower is better) Translates to: ARNNKGTEESVSLKLLRLAPRFP*LGASDE Trigger: CTCATCTGAAGCCCCGAGCCAGGGAAAGCGTGGAGC...CAGTCTCAGGAGCTTCAATGACACAGACTCCTCTGTGCCCTTGTTATTCCTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021853.12 |
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| CDS-3UTR CCA 90 bp | CACTCTCCTCGTAACTGCTATGCTAGGAATAACAAGGGCACAGAGGAGTCTGTGTCCTGGCAGTTTCCTTaGGTAGGCTGCCCAGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: HSPRNCYARNNKGTEESVSWQFP*VGCPGH Trigger: ATGCCCTGGGCAGCCTACCCAAGGAAACTGCCAGGA...CACAGACTCCTCTGTGCCCTTGTTATTCCTAGCATAGCAGTTACGAGGAGAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021853.12 |
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| 3UTR CAA 72 bp | GCTAGGAATAACAAGGGCACAGAGGAGTCTGTGTCATaGAAGCTCCTGAGACTGGGACTCTCAGTGCATGCC | + |
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Preference number: 4 (lower is better) Translates to: ARNNKGTEESVS*KLLRLGLSVHA Trigger: GGCATGCACTGAGAGTCCCAGTCTCAGGAGCTTCAATGACACAGACTCCTCTGTGCCCTTGTTATTCCTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021853.12 |
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| CDS-3UTR GCA 90 bp | CACTCTCCTCGTAACTGCTATGCTAGGAATAACAAGGGCACAGAGGAGTCTGTGGCCCAGGGCATTTCTTaGATCCCACGTGGCTTTGTT | + |
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Preference number: 4 (lower is better) Translates to: HSPRNCYARNNKGTEESVAQGIS*IPRGFV Trigger: AACAAAGCCACGTGGGATGCAAGAAATGCCCTGGGC...CACAGACTCCTCTGTGCCCTTGTTATTCCTAGCATAGCAGTTACGAGGAGAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021853.12 |
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| CDS-3UTR GCA 90 bp | CAAGGGCACAGAGGAGTCTGTGTCATTGAAGCTCCTGAGACTGGGACTCTCAGTTGGGCCATTTACTACTaGAACCAGAGGCTTCGGAAA | + |
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Preference number: 4 (lower is better) Translates to: QGHRGVCVIEAPETGTLSWAIYY*NQRLRK Trigger: TTTCCGAAGCCTCTGGTTGCAGTAGTAAATGGCCCA...ACTGAGAGTCCCAGTCTCAGGAGCTTCAATGACACAGACTCCTCTGTGCCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021853.12 |
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| CDS-3UTR GCA 90 bp | GCTAGGAATAACAAGGGCACAGAGGAGTCTGTGTCATTGAAGCTCCTGAGACTGAGCCCAGGCCTCTCTTaGTGTGAGCTTCTTCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: ARNNKGTEESVSLKLLRLSPGLS*CELLPK Trigger: TTTGGGAAGAAGCTCACAGCAAGAGAGGCCTGGGCT...CAGTCTCAGGAGCTTCAATGACACAGACTCCTCTGTGCCCTTGTTATTCCTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021853.12 |
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| CDS-3UTR TCA 90 bp | CCTCGTAACTGCTATGCTAGGAATAACAAGGGCACAGAGGAGTCTGTGTCATTGGCTCGGGGCTTCAGATaGGGAACTCAAACTGGATAC | + |
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Preference number: 4 (lower is better) Translates to: PRNCYARNNKGTEESVSLARGFR*GTQTGY Trigger: GTATCCAGTTTGAGTTCCTCATCTGAAGCCCCGAGC...CAATGACACAGACTCCTCTGTGCCCTTGTTATTCCTAGCATAGCAGTTACGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021853.12 |
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| CDS-3UTR TCA 90 bp | CACTCTCCTCGTAACTGCTATGCTAGGAATAACAAGGGCACAGAGGAGTCTGTGAGGCCTCTCTTGCTGTaGGCTTCTTCCCAAAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: HSPRNCYARNNKGTEESVRPLLL*ASSQRE Trigger: TTCTCTTTGGGAAGAAGCTCACAGCAAGAGAGGCCT...CACAGACTCCTCTGTGCCCTTGTTATTCCTAGCATAGCAGTTACGAGGAGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021853.12 |
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| CDS-3UTR CCA 90 bp | GCTAGGAATAACAAGGGCACAGAGGAGTCTGTGTCATTGAAGCTCCTGAGACTGCCACATAGTTCTTCCTaGCAGTTTCCTTGGGTAGGC | + |
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Preference number: 4 (lower is better) Translates to: ARNNKGTEESVSLKLLRLPHSSS*QFPWVG Trigger: GCCTACCCAAGGAAACTGCCAGGAAGAACTATGTGG...CAGTCTCAGGAGCTTCAATGACACAGACTCCTCTGTGCCCTTGTTATTCCTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021853.12 |
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| CDS-3UTR GCA 90 bp | CCTCGTAACTGCTATGCTAGGAATAACAAGGGCACAGAGGAGTCTGTGTCATTGCAGGAAGTTCCTGAGTaGCTTCGCATACTCCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: PRNCYARNNKGTEESVSLQEVPE*LRILLS Trigger: AGAGAGGAGTATGCGAAGGCACTCAGGAACTTCCTG...CAATGACACAGACTCCTCTGTGCCCTTGTTATTCCTAGCATAGCAGTTACGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021853.12 |
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| CDS-3UTR TCA 90 bp | GTCAGGTCAATTCTAGCTATCCTGCATAAACTCATAAGGCTTTGTTTTATGGGATCAGTGACAAGGCCTTaGGCCCAGGCCTCTCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: VRSILAILHKLIRLCFMGSVTRP*AQASLA Trigger: AGCAAGAGAGGCCTGGGCTCAAGGCCTTGTCACTGA...TCCCATAAAACAAAGCCTTATGAGTTTATGCAGGATAGCTAGAATTGACCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021853.12 |
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| CDS-3UTR GCA 90 bp | GCTAGGAATAACAAGGGCACAGAGGAGTCTGTGTCATTGAAGCTCCTGAGACTGCTTCTGTCTCAAAAGTaGTCTCAGGGAAAACTTCAG | + |
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Preference number: 4 (lower is better) Translates to: ARNNKGTEESVSLKLLRLLLSQK*SQGKLQ Trigger: CTGAAGTTTTCCCTGAGAGCACTTTTGAGACAGAAG...CAGTCTCAGGAGCTTCAATGACACAGACTCCTCTGTGCCCTTGTTATTCCTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021853.12 |
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| CDS-3UTR CCA 90 bp | CCTCGTAACTGCTATGCTAGGAATAACAAGGGCACAGAGGAGTCTGTGTCATTGACATCTGGAAGGATATaGCATTCTTTTTGGTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: PRNCYARNNKGTEESVSLTSGRI*HSFWWA Trigger: GGCCCACCAAAAAGAATGCCATATCCTTCCAGATGT...CAATGACACAGACTCCTCTGTGCCCTTGTTATTCCTAGCATAGCAGTTACGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021853.12 |
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| CDS-3UTR CCA 90 bp | CTCCTCGTAACTGCTATGCTAGGAATAACAAGGGCACAGAGGAGTCTGTGTCATTTGGAAACATGTATGTaGAGCATGCTTCCGGGATCT | + |
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Preference number: 4 (lower is better) Translates to: LLVTAMLGITRAQRSLCHLETCM*SMLPGS Trigger: AGATCCCGGAAGCATGCTCCACATACATGTTTCCAA...ATGACACAGACTCCTCTGTGCCCTTGTTATTCCTAGCATAGCAGTTACGAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021853.12 |
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| CDS-3UTR GCA 90 bp | TTCAGAGATGTAAAGTTTCATTGTAGAGGTCTATCACCCTCTGGGTCAGGTCAATTTCCTTGGGTAGGCTaGCCAGGGCATTTCTTGCAT | + |
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Preference number: 4 (lower is better) Translates to: FRDVKFHCRGLSPSGSGQFPWVG*PGHFLH Trigger: ATGCAAGAAATGCCCTGGGCAGCCTACCCAAGGAAA...TTGACCTGACCCAGAGGGTGATAGACCTCTACAATGAAACTTTACATCTCTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021853.12 |
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| CDS-3UTR GCA 90 bp | AGTTTCATTGTAGAGGTCTATCACCCTCTGGGTCAGGTCAATTCTAGCTATCCTTTAGGTCATTCCCACTaGTGTAGTAGTCACCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: SFIVEVYHPLGQVNSSYPLGHSH*CSSHQF Trigger: GAACTGGTGACTACTACAGCAGTGGGAATGACCTAA...AGGATAGCTAGAATTGACCTGACCCAGAGGGTGATAGACCTCTACAATGAAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021853.12 |
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| CDS-3UTR CCA 90 bp | TCTCCTCGTAACTGCTATGCTAGGAATAACAAGGGCACAGAGGAGTCTGTGTCAATGAGGAACTCAAACTaGATACGAGATCCACATAGT | + |
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Preference number: 4 (lower is better) Translates to: SPRNCYARNNKGTEESVSMRNSN*IRDPHS Trigger: ACTATGTGGATCTCGTATCCAGTTTGAGTTCCTCAT...TGACACAGACTCCTCTGTGCCCTTGTTATTCCTAGCATAGCAGTTACGAGGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021853.12 |
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| CDS-3UTR CCA 90 bp | CTCCTCGTAACTGCTATGCTAGGAATAACAAGGGCACAGAGGAGTCTGTGTCATAATATGTTTTCAGCCTaGTCCAGACTTCTGTCTCAA | + |
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Preference number: 4 (lower is better) Translates to: LLVTAMLGITRAQRSLCHNMFSA*SRLLSQ Trigger: TTGAGACAGAAGTCTGGACCAGGCTGAAAACATATT...ATGACACAGACTCCTCTGTGCCCTTGTTATTCCTAGCATAGCAGTTACGAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021853.12 |
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| CDS-3UTR TCA 90 bp | AGTTTCATTGTAGAGGTCTATCACCCTCTGGGTCAGGTCAATTCTAGCTATCCTGAAAACAGTTATGACTaGGTTATCCGTGCTGGCATT | + |
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Preference number: 4 (lower is better) Translates to: SFIVEVYHPLGQVNSSYPENSYD*VIRAGI Trigger: AATGCCAGCACGGATAACTCAGTCATAACTGTTTTC...AGGATAGCTAGAATTGACCTGACCCAGAGGGTGATAGACCTCTACAATGAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021853.12 |
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| CDS-3UTR GCA 90 bp | CACTCTCCTCGTAACTGCTATGCTAGGAATAACAAGGGCACAGAGGAGTCTGTGGCTGGCATTTTTAAGTaGATGCATAATATCCAGATA | + |
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Preference number: 4 (lower is better) Translates to: HSPRNCYARNNKGTEESVAGIFK*MHNIQI Trigger: TATCTGGATATTATGCATGCACTTAAAAATGCCAGC...CACAGACTCCTCTGTGCCCTTGTTATTCCTAGCATAGCAGTTACGAGGAGAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021853.12 |
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| CDS-3UTR CCA 90 bp | GTCAGGTCAATTCTAGCTATCCTGCATAAACTCATAAGGCTTTGTTTTATGGGATGGGCCCATTATCTTTaGAAACATGTATGTGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: VRSILAILHKLIRLCFMGWAHYL*KHVCGA Trigger: TGCTCCACATACATGTTTCCAAAGATAATGGGCCCA...TCCCATAAAACAAAGCCTTATGAGTTTATGCAGGATAGCTAGAATTGACCTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021853.12 |
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| CDS-3UTR CCA 90 bp | GTCAGGTCAATTCTAGCTATCCTGCATAAACTCATAAGGCTTTGTTTTATGGGAATATCCAGATACATCTaGAAGGATATGGCATTCTTT | + |
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Preference number: 4 (lower is better) Translates to: VRSILAILHKLIRLCFMGISRYI*KDMAFF Trigger: AAAGAATGCCATATCCTTCCAGATGTATCTGGATAT...TCCCATAAAACAAAGCCTTATGAGTTTATGCAGGATAGCTAGAATTGACCTGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021853.12 |
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| CDS TCA 90 bp | GGCTTTCTCATCAGCTCCACGCTTTCCCTGGCTCGGGGCTTCAGATaGGGAACTCAAACTGGATACGAGATCCACATAGTTCTTCCTGGC | + |
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Preference number: 5 (lower is better) Translates to: GFLISSTLSLARGFR*GTQTGYEIHIVLPG Trigger: GCCAGGAAGAACTATGTGGATCTCGTATCCAGTTTGAGTTCCTCATCTGAAGCCCCGAGCCAGGGAAAGCGTGGAGCTGATGAGAAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021853.12 ENSMUST00000164155.2 |
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| CDS TCA 90 bp | GTGGAGCATGCTTCCGGGATCTGGCTGAGTTGGCTGAATGGAGTATaGAACGTTGCCCTGTCCGAAGCAAAGACAGCATCAAATAGTGCC | + |
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Preference number: 5 (lower is better) Translates to: VEHASGIWLSWLNGV*NVALSEAKTASNSA Trigger: GGCACTATTTGATGCTGTCTTTGCTTCGGACAGGGCAACGTTTCATACTCCATTCAGCCAACTCAGCCAGATCCCGGAAGCATGCTCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021853.12 ENSMUST00000164155.2 |
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| CDS-3UTR CAA 90 bp | GCTAGGAATAACAAGGGCACAGAGGAGTCTGTGTCATTGAAGCTCCTGAGACTGTGCCCAGGGCATTTCTaGCATCCCACGTGGCTTTGT | + |
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Preference number: 5 (lower is better) Translates to: ARNNKGTEESVSLKLLRLCPGHF*HPTWLC Trigger: ACAAAGCCACGTGGGATGCAAGAAATGCCCTGGGCA...CAGTCTCAGGAGCTTCAATGACACAGACTCCTCTGTGCCCTTGTTATTCCTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021853.12 |
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| CDS-3UTR CAA 90 bp | CAAGGGCACAGAGGAGTCTGTGTCATTGAAGCTCCTGAGACTGGGACTCTCAGTTTGGGCCCATTATCTTaGGAAACATGTATGTGGAGC | + |
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Preference number: 5 (lower is better) Translates to: QGHRGVCVIEAPETGTLSLGPLS*ETCMWS Trigger: GCTCCACATACATGTTTCCAAAGATAATGGGCCCAA...ACTGAGAGTCCCAGTCTCAGGAGCTTCAATGACACAGACTCCTCTGTGCCCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021853.12 |
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| CDS-3UTR CAA 90 bp | CACTCTCCTCGTAACTGCTATGCTAGGAATAACAAGGGCACAGAGGAGTCTGTGGATATGGCATTCTTTTaGGTGGGCCGATTGAACGTG | + |
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Preference number: 5 (lower is better) Translates to: HSPRNCYARNNKGTEESVDMAFF*VGRLNV Trigger: CACGTTCAATCGGCCCACCAAAAAGAATGCCATATC...CACAGACTCCTCTGTGCCCTTGTTATTCCTAGCATAGCAGTTACGAGGAGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021853.12 |
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| CDS GCA 90 bp | TGCCTTTGTTGGGCCCATTATCTTTGGAAACATGTATGTGGAGCATaGTTCCGGGATCTGGCTGAGTTGGCTGAATGGAGTATGAAACGT | + |
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Preference number: 5 (lower is better) Translates to: CLCWAHYLWKHVCGA*FRDLAELAEWSMKR Trigger: ACGTTTCATACTCCATTCAGCCAACTCAGCCAGATCCCGGAAGCATGCTCCACATACATGTTTCCAAAGATAATGGGCCCAACAAAGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021853.12 ENSMUST00000164155.2 |
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| CDS-3UTR CAA 90 bp | CCTCGTAACTGCTATGCTAGGAATAACAAGGGCACAGAGGAGTCTGTGTCATTGTCCCACGTGGCTTTGTaGACAAAGTTAAACACACCA | + |
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Preference number: 5 (lower is better) Translates to: PRNCYARNNKGTEESVSLSHVAL*TKLNTP Trigger: TGGTGTGTTTAACTTTGTCAACAAAGCCACGTGGGA...CAATGACACAGACTCCTCTGTGCCCTTGTTATTCCTAGCATAGCAGTTACGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021853.12 |
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| CDS-3UTR CAA 90 bp | TTCAGAGATGTAAAGTTTCATTGTAGAGGTCTATCACCCTCTGGGTCAGGTCAAGTTACCAGGATGTCTTaGGACTCCCGGGCTTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: FRDVKFHCRGLSPSGSGQVTRMS*DSRAFS Trigger: TGAGAAAGCCCGGGAGTCCAAAGACATCCTGGTAAC...TTGACCTGACCCAGAGGGTGATAGACCTCTACAATGAAACTTTACATCTCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021853.12 |
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| CDS-3UTR CAA 90 bp | TTCAGAGATGTAAAGTTTCATTGTAGAGGTCTATCACCCTCTGGGTCAGGTCAACGGGATCTGGCTGAGTaGGCTGAATGGAGTATGAAA | + |
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Preference number: 5 (lower is better) Translates to: FRDVKFHCRGLSPSGSGQRDLAE*AEWSMK Trigger: TTTCATACTCCATTCAGCCAACTCAGCCAGATCCCG...TTGACCTGACCCAGAGGGTGATAGACCTCTACAATGAAACTTTACATCTCTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021853.12 |
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| CDS-3UTR CAA 90 bp | AGTTTCATTGTAGAGGTCTATCACCCTCTGGGTCAGGTCAATTCTAGCTATCCTGCATCCCACGTGGCTTaGTTGACAAAGTTAAACACA | + |
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Preference number: 5 (lower is better) Translates to: SFIVEVYHPLGQVNSSYPASHVA*LTKLNT Trigger: TGTGTTTAACTTTGTCAACAAAGCCACGTGGGATGC...AGGATAGCTAGAATTGACCTGACCCAGAGGGTGATAGACCTCTACAATGAAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021853.12 |
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| CDS TCA 72 bp | ATCAGCTCCACGCTTTCCCTGGCTCGGGGCTTCAGATaGGGAACTCAAACTGGATACGAGATCCACATAGTT | + |
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Preference number: 6 (lower is better) Translates to: ISSTLSLARGFR*GTQTGYEIHIV Trigger: AACTATGTGGATCTCGTATCCAGTTTGAGTTCCTCATCTGAAGCCCCGAGCCAGGGAAAGCGTGGAGCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021853.12 ENSMUST00000164155.2 |
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| CDS TCA 72 bp | CCGAAGCAAAGACAGCATCAAATAGTGCCAGGATGGTaGCAGCGATTCCCACAGCTGGGCCATTTACTACTG | + |
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Preference number: 6 (lower is better) Translates to: PKQRQHQIVPGW*QRFPQLGHLLL Trigger: CAGTAGTAAATGGCCCAGCTGTGGGAATCGCTGTCACCATCCTGGCACTATTTGATGCTGTCTTTGCTTCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021853.12 ENSMUST00000164155.2 |
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| CDS GCA 72 bp | CTTAGCCTTTGCCTTTCTGAACAGGAAGTTCCTGAGTaGCTTCGCATACTCCTCTCTCGGCATCCTTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: LSLCLSEQEVPE*LRILLSRHPFQ Trigger: CTGGAAAGGATGCCGAGAGAGGAGTATGCGAAGGCACTCAGGAACTTCCTGTTCAGAAAGGCAAAGGCTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021853.12 |
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| CDS GCA 72 bp | TGGGCCCATTATCTTTGGAAACATGTATGTGGAGCATaGTTCCGGGATCTGGCTGAGTTGGCTGAATGGAGT | + |
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Preference number: 6 (lower is better) Translates to: WAHYLWKHVCGA*FRDLAELAEWS Trigger: ACTCCATTCAGCCAACTCAGCCAGATCCCGGAAGCATGCTCCACATACATGTTTCCAAAGATAATGGGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021853.12 ENSMUST00000164155.2 |
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| CDS CCA 72 bp | TTCCCTGGCTCGGGGCTTCAGATGAGGAACTCAAACTaGATACGAGATCCACATAGTTCTTCCTGGCAGTTT | + |
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Preference number: 6 (lower is better) Translates to: FPGSGLQMRNSN*IRDPHSSSWQF Trigger: AAACTGCCAGGAAGAACTATGTGGATCTCGTATCCAGTTTGAGTTCCTCATCTGAAGCCCCGAGCCAGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021853.12 ENSMUST00000164155.2 |
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| CDS CCA 72 bp | TCACGTTTGGCGAGAGCTTCGAATATGTTTTCAGCCTaGTCCAGACTTCTGTCTCAAAAGTGCTCTCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: SRLARASNMFSA*SRLLSQKCSQG Trigger: TCCCTGAGAGCACTTTTGAGACAGAAGTCTGGACCAGGCTGAAAACATATTCGAAGCTCTCGCCAAACGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021853.12 |
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| CDS CAA 72 bp | GAAGCATCTCAGCTGCCTTTGTTGGGCCCATTATCTTaGGAAACATGTATGTGGAGCATGCTTCCGGGATCT | + |
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Preference number: 6 (lower is better) Translates to: EASQLPLLGPLS*ETCMWSMLPGS Trigger: AGATCCCGGAAGCATGCTCCACATACATGTTTCCAAAGATAATGGGCCCAACAAAGGCAGCTGAGATGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021853.12 ENSMUST00000164155.2 |
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| CDS CAA 72 bp | GCTTCTTCCCAAAGAGAAGCATCTCAGCTGCCTTTGTaGGGCCCATTATCTTTGGAAACATGTATGTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: ASSQREASQLPL*GPLSLETCMWS Trigger: GCTCCACATACATGTTTCCAAAGATAATGGGCCCAACAAAGGCAGCTGAGATGCTTCTCTTTGGGAAGAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021853.12 ENSMUST00000164155.2 |
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| CDS GCA 72 bp | TGCTGTGAGCTTCTTCCCAAAGAGAAGCATCTCAGCTaGCTTTGTTGGGCCCATTATCTTTGGAAACATGTA | + |
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Preference number: 6 (lower is better) Translates to: CCELLPKEKHLS*LCWAHYLWKHV Trigger: TACATGTTTCCAAAGATAATGGGCCCAACAAAGGCAGCTGAGATGCTTCTCTTTGGGAAGAAGCTCACAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021853.12 ENSMUST00000164155.2 |
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| CDS CCA 72 bp | CTTCTTCCCAAAGAGAAGCATCTCAGCTGCCTTTGTTaGGCCCATTATCTTTGGAAACATGTATGTGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: LLPKEKHLSCLC*AHYLWKHVCGA Trigger: TGCTCCACATACATGTTTCCAAAGATAATGGGCCCAACAAAGGCAGCTGAGATGCTTCTCTTTGGGAAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021853.12 ENSMUST00000164155.2 |
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| CDS CAA 90 bp | TCCAGATACATCTGGAAGGATATGGCATTCTTTTTGGTGGGCCGATaGAACGTGATCTTTGTGATGCCATCTTCAGAAGTTACCAGGATG | + |
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Preference number: 6 (lower is better) Translates to: SRYIWKDMAFFLVGR*NVIFVMPSSEVTRM Trigger: CATCCTGGTAACTTCTGAAGATGGCATCACAAAGATCACGTTCAATCGGCCCACCAAAAAGAATGCCATATCCTTCCAGATGTATCTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021853.12 ENSMUST00000164155.2 |
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| CDS CAA 72 bp | ATCTGGAAGGATATGGCATTCTTTTTGGTGGGCCGATaGAACGTGATCTTTGTGATGCCATCTTCAGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: IWKDMAFFLVGR*NVIFVMPSSEV Trigger: AACTTCTGAAGATGGCATCACAAAGATCACGTTCAATCGGCCCACCAAAAAGAATGCCATATCCTTCCAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021853.12 ENSMUST00000164155.2 |
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| CDS CAA 90 bp | GCATGCATAATATCCAGATACATCTGGAAGGATATGGCATTCTTTTaGGTGGGCCGATTGAACGTGATCTTTGTGATGCCATCTTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: ACIISRYIWKDMAFF*VGRLNVIFVMPSSE Trigger: TTCTGAAGATGGCATCACAAAGATCACGTTCAATCGGCCCACCAAAAAGAATGCCATATCCTTCCAGATGTATCTGGATATTATGCATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021853.12 ENSMUST00000164155.2 |
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| CDS TCA 72 bp | GTAGTAGTCACCAGTTCCTGTGAAAACAGTTATGACTaGGTTATCCGTGCTGGCATTTTTAAGTGCATGCAT | + |
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Preference number: 6 (lower is better) Translates to: VVVTSSCENSYD*VIRAGIFKCMH Trigger: ATGCATGCACTTAAAAATGCCAGCACGGATAACTCAGTCATAACTGTTTTCACAGGAACTGGTGACTACTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021853.12 ENSMUST00000164155.2 |
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| CDS CCA 72 bp | GCATTTTTAAGTGCATGCATAATATCCAGATACATCTaGAAGGATATGGCATTCTTTTTGGTGGGCCGATTG | + |
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Preference number: 6 (lower is better) Translates to: AFLSACIISRYI*KDMAFFLVGRL Trigger: CAATCGGCCCACCAAAAAGAATGCCATATCCTTCCAGATGTATCTGGATATTATGCATGCACTTAAAAATGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000021853.12 ENSMUST00000164155.2 |
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