Pregenerated sensors for ECI2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021417Ensembl transcript IDs: ENSMUST00000021854.14, ENSMUST00000110251.9, ENSMUST00000163280.8, ENSMUST00000167036.8, ENSMUST00000169759.2, ENSMUST00000170538.8, ENSMUST00000170989.8, ENSMUST00000171229.8, ENSMUST00000171258.8, ENSMUST00000178421.8
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | GCACAGAGAAGCATGTGTCGTTTGAGTCCTCGAAACTaGACCTCCCAGCCCATGCTCCCTATGAGGAGTCTA | + |
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Preference number: 3 (lower is better) Translates to: AQRSMCRLSPRN*TSQPMLPMRSL Trigger: TAGACTCCTCATAGGGAGCATGGGCTGGGAGGTCCAGTTTCGAGGACTCAAACGACACATGCTTCTCTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR GCA 90 bp | CCTCGAAACTGGACCTCCCAGCCCATGCTCCCTATGAGGAGTCTAGCTGCTGTGCGTGTAAGAGGAGCATaGTTCCGGGCTCTGGCCGAG | + |
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Preference number: 4 (lower is better) Translates to: PRNWTSQPMLPMRSLAAVRVRGA*FRALAE Trigger: CTCGGCCAGAGCCCGGAAGCATGCTCCTCTTACACG...CACAGCAGCTAGACTCCTCATAGGGAGCATGGGCTGGGAGGTCCAGTTTCGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR CCA 90 bp | TCGTTTGAGTCCTCGAAACTGGACCTCCCAGCCCATGCTCCCTATGAGGAGTCTGCCTGGCAGTTTCCTTaGGTAGGCTGCCCAGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: SFESSKLDLPAHAPYEESAWQFP*VGCPGH Trigger: ATGCCCTGGGCAGCCTACCCAAGGAAACTGCCAGGC...AGACTCCTCATAGGGAGCATGGGCTGGGAGGTCCAGTTTCGAGGACTCAAACGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR TCA 90 bp | GTGTCGTTTGAGTCCTCGAAACTGGACCTCCCAGCCCATGCTCCCTATGAGGAGGTTCATGCACTCCTCTaGCAGCCACCTTGCTTGCAG | + |
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Preference number: 4 (lower is better) Translates to: VSFESSKLDLPAHAPYEEVHALL*QPPCLQ Trigger: CTGCAAGCAAGGTGGCTGTCAGAGGAGTGCATGAAC...CTCCTCATAGGGAGCATGGGCTGGGAGGTCCAGTTTCGAGGACTCAAACGACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR GCA 90 bp | GAGTCCTCGAAACTGGACCTCCCAGCCCATGCTCCCTATGAGGAGTCTAGCTGCAGCCCAGGCCTCTCTTaGTGTCAGCTTCTTCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: ESSKLDLPAHAPYEESSCSPGLS*CQLLPK Trigger: TTTGGGAAGAAGCTGACAGCAAGAGAGGCCTGGGCT...GCAGCTAGACTCCTCATAGGGAGCATGGGCTGGGAGGTCCAGTTTCGAGGACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR CCA 90 bp | AACTGGACCTCCCAGCCCATGCTCCCTATGAGGAGTCTAGCTGCTGTGGTGGTCCCACATAGTTCTGCCTaGCAGTTTCCTTGGGTAGGC | + |
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Preference number: 4 (lower is better) Translates to: NWTSQPMLPMRSLAAVVVPHSSA*QFPWVG Trigger: GCCTACCCAAGGAAACTGCCAGGCAGAACTATGTGG...GACCACCACAGCAGCTAGACTCCTCATAGGGAGCATGGGCTGGGAGGTCCAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR TCA 90 bp | AACTGGACCTCCCAGCCCATGCTCCCTATGAGGAGTCTAGCTGCTGTGGTGGTCCCCACTTGGCTTTGTTaGCAAAGTCAAGCATACCAG | + |
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Preference number: 4 (lower is better) Translates to: NWTSQPMLPMRSLAAVVVPTWLC*QSQAYQ Trigger: CTGGTATGCTTGACTTTGTCAACAAAGCCAAGTGGG...GACCACCACAGCAGCTAGACTCCTCATAGGGAGCATGGGCTGGGAGGTCCAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR GCA 90 bp | TCGTTTGAGTCCTCGAAACTGGACCTCCCAGCCCATGCTCCCTATGAGGAGTCTTTTCCTTGGGTAGGCTaGCCAGGGCATTCCATGCAT | + |
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Preference number: 4 (lower is better) Translates to: SFESSKLDLPAHAPYEESFPWVG*PGHSMH Trigger: ATGCATGGAATGCCCTGGGCAGCCTACCCAAGGAAA...AGACTCCTCATAGGGAGCATGGGCTGGGAGGTCCAGTTTCGAGGACTCAAACGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR GCA 90 bp | AACTGGACCTCCCAGCCCATGCTCCCTATGAGGAGTCTAGCTGCTGTGGTGGTCTCAGGTCATTCCCACTaGAGTAGTAGTCACCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: NWTSQPMLPMRSLAAVVVSGHSH*SSSHQF Trigger: GAACTGGTGACTACTACTGCAGTGGGAATGACCTGA...GACCACCACAGCAGCTAGACTCCTCATAGGGAGCATGGGCTGGGAGGTCCAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR CCA 90 bp | TCGTTTGAGTCCTCGAAACTGGACCTCCCAGCCCATGCTCCCTATGAGGAGTCTCCACATAGTTCTGCCTaGCAGTTTCCTTGGGTAGGC | + |
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Preference number: 4 (lower is better) Translates to: SFESSKLDLPAHAPYEESPHSSA*QFPWVG Trigger: GCCTACCCAAGGAAACTGCCAGGCAGAACTATGTGG...AGACTCCTCATAGGGAGCATGGGCTGGGAGGTCCAGTTTCGAGGACTCAAACGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR GCA 90 bp | TCCTCGAAACTGGACCTCCCAGCCCATGCTCCCTATGAGGAGTCTAGCTGCTGTTCAGGTCATTCCCACTaGAGTAGTAGTCACCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: SSKLDLPAHAPYEESSCCSGHSH*SSSHQF Trigger: GAACTGGTGACTACTACTGCAGTGGGAATGACCTGA...ACAGCAGCTAGACTCCTCATAGGGAGCATGGGCTGGGAGGTCCAGTTTCGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR GCA 90 bp | GAGTCCTCGAAACTGGACCTCCCAGCCCATGCTCCCTATGAGGAGTCTAGCTGCGTTGGTCTGCCCAAGTaGAGTTTAGCCACTTGTAAT | + |
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Preference number: 4 (lower is better) Translates to: ESSKLDLPAHAPYEESSCVGLPK*SLATCN Trigger: ATTACAAGTGGCTAAACTGCACTTGGGCAGACCAAC...GCAGCTAGACTCCTCATAGGGAGCATGGGCTGGGAGGTCCAGTTTCGAGGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110251.9 ENSMUST00000171229.8 |
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| CDS-3UTR CCA 90 bp | TTGAGTCCTCGAAACTGGACCTCCCAGCCCATGCTCCCTATGAGGAGTCTAGCTTACAGGGTCCTTCTGTaGCCTGCTTGTACAGTGCAT | + |
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Preference number: 4 (lower is better) Translates to: LSPRNWTSQPMLPMRSLAYRVLL*PACTVH Trigger: ATGCACTGTACAAGCAGGCCACAGAAGGACCCTGTA...AGCTAGACTCCTCATAGGGAGCATGGGCTGGGAGGTCCAGTTTCGAGGACTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR CCA 90 bp | TCGTTTGAGTCCTCGAAACTGGACCTCCCAGCCCATGCTCCCTATGAGGAGTCTTACAGGGTCCTTCTGTaGCCTGCTTGTACAGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SFESSKLDLPAHAPYEESYRVLL*PACTVH Trigger: ATGCACTGTACAAGCAGGCCACAGAAGGACCCTGTA...AGACTCCTCATAGGGAGCATGGGCTGGGAGGTCCAGTTTCGAGGACTCAAACGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR CCA 90 bp | CCTCGAAACTGGACCTCCCAGCCCATGCTCCCTATGAGGAGTCTAGCTGCTGTGCATATGTTTTCAGCCTaGTCCAGACTTCTGTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PRNWTSQPMLPMRSLAAVHMFSA*SRLLSQ Trigger: TTGAGACAGAAGTCTGGACCAGGCTGAAAACATATG...CACAGCAGCTAGACTCCTCATAGGGAGCATGGGCTGGGAGGTCCAGTTTCGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR CCA 90 bp | TTTGAGTCCTCGAAACTGGACCTCCCAGCCCATGCTCCCTATGAGGAGTCTAGCACTGGCTCTCATTGTTaGTCTGCCCAAGTGCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: FESSKLDLPAHAPYEESSTGSHC*SAQVQF Trigger: AAACTGCACTTGGGCAGACCAACAATGAGAGCCAGT...GCTAGACTCCTCATAGGGAGCATGGGCTGGGAGGTCCAGTTTCGAGGACTCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110251.9 ENSMUST00000171229.8 |
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| CDS-3UTR CCA 90 bp | TCGTTTGAGTCCTCGAAACTGGACCTCCCAGCCCATGCTCCCTATGAGGAGTCTACTGGCTCTCATTGTTaGTCTGCCCAAGTGCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: SFESSKLDLPAHAPYEESTGSHC*SAQVQF Trigger: AAACTGCACTTGGGCAGACCAACAATGAGAGCCAGT...AGACTCCTCATAGGGAGCATGGGCTGGGAGGTCCAGTTTCGAGGACTCAAACGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110251.9 ENSMUST00000171229.8 |
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| CDS-3UTR GCA 90 bp | CGAAACTGGACCTCCCAGCCCATGCTCCCTATGAGGAGTCTAGCTGCTGTGGTGTTTCACCTGGTTCAATaGATTTTCAAAGTCCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: RNWTSQPMLPMRSLAAVVFHLVQ*IFKVLL Trigger: CAGCAGGACTTTGAAAATGCATTGAACCAGGTGAAA...CACCACAGCAGCTAGACTCCTCATAGGGAGCATGGGCTGGGAGGTCCAGTTTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR GCA 90 bp | GAGTCCTCGAAACTGGACCTCCCAGCCCATGCTCCCTATGAGGAGTCTAGCTGCTTTCACCTGGTTCAATaGATTTTCAAAGTCCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: ESSKLDLPAHAPYEESSCFHLVQ*IFKVLL Trigger: CAGCAGGACTTTGAAAATGCATTGAACCAGGTGAAA...GCAGCTAGACTCCTCATAGGGAGCATGGGCTGGGAGGTCCAGTTTCGAGGACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR GCA 90 bp | AAGGAAAAGGCACAGAGAAGCATGTGTCGTTTGAGTCCTCGAAACTGGACCTCCGCCCAGGGCATTCCATaGATCCCACTTGGCTTTGTT | + |
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Preference number: 4 (lower is better) Translates to: KEKAQRSMCRLSPRNWTSAQGIP*IPLGFV Trigger: AACAAAGCCAAGTGGGATGCATGGAATGCCCTGGGC...GGAGGTCCAGTTTCGAGGACTCAAACGACACATGCTTCTCTGTGCCTTTTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR GCA 90 bp | GTTAATCAAGGAAAAGGCACAGAGAAGCATGTGTCGTTTGAGTCCTCGAAACTGCGTGTAAGAGGAGCATaGTTCCGGGCTCTGGCCGAG | + |
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Preference number: 4 (lower is better) Translates to: VNQGKGTEKHVSFESSKLRVRGA*FRALAE Trigger: CTCGGCCAGAGCCCGGAAGCATGCTCCTCTTACACG...CAGTTTCGAGGACTCAAACGACACATGCTTCTCTGTGCCTTTTCCTTGATTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR GCA 90 bp | TTTGAGTCCTCGAAACTGGACCTCCCAGCCCATGCTCCCTATGAGGAGTCTAGCGTTGGTCTGCCCAAGTaGAGTTTAGCCACTTGTAAT | + |
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Preference number: 4 (lower is better) Translates to: FESSKLDLPAHAPYEESSVGLPK*SLATCN Trigger: ATTACAAGTGGCTAAACTGCACTTGGGCAGACCAAC...GCTAGACTCCTCATAGGGAGCATGGGCTGGGAGGTCCAGTTTCGAGGACTCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110251.9 ENSMUST00000171229.8 |
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| CDS-3UTR GCA 90 bp | CGAAACTGGACCTCCCAGCCCATGCTCCCTATGAGGAGTCTAGCTGCTGTGGTGGCTGGCATTTTTAAGTaGGAGTATAATATCCCGATA | + |
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Preference number: 4 (lower is better) Translates to: RNWTSQPMLPMRSLAAVVAGIFK*EYNIPI Trigger: TATCGGGATATTATACTCGCACTTAAAAATGCCAGC...CACCACAGCAGCTAGACTCCTCATAGGGAGCATGGGCTGGGAGGTCCAGTTTCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR GCA 90 bp | AATTGCTACGTTAATCAAGGAAAAGGCACAGAGAAGCATGTGTCGTTTGAGTCCCGTGTAAGAGGAGCATaGTTCCGGGCTCTGGCCGAG | + |
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Preference number: 4 (lower is better) Translates to: NCYVNQGKGTEKHVSFESRVRGA*FRALAE Trigger: CTCGGCCAGAGCCCGGAAGCATGCTCCTCTTACACG...GGACTCAAACGACACATGCTTCTCTGTGCCTTTTCCTTGATTAACGTAGCAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR CCA 90 bp | CATGTGTCGTTTGAGTCCTCGAAACTGGACCTCCCAGCCCATGCTCCCTATGAGCATATGTTTTCAGCCTaGTCCAGACTTCTGTCTCAA | + |
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Preference number: 4 (lower is better) Translates to: HVSFESSKLDLPAHAPYEHMFSA*SRLLSQ Trigger: TTGAGACAGAAGTCTGGACCAGGCTGAAAACATATG...CTCATAGGGAGCATGGGCTGGGAGGTCCAGTTTCGAGGACTCAAACGACACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR CCA 90 bp | TTTGAGTCCTCGAAACTGGACCTCCCAGCCCATGCTCCCTATGAGGAGTCTAGCCATATGTTTTCAGCCTaGTCCAGACTTCTGTCTCAA | + |
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Preference number: 4 (lower is better) Translates to: FESSKLDLPAHAPYEESSHMFSA*SRLLSQ Trigger: TTGAGACAGAAGTCTGGACCAGGCTGAAAACATATG...GCTAGACTCCTCATAGGGAGCATGGGCTGGGAGGTCCAGTTTCGAGGACTCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| 3UTR CAA 72 bp | TTAATCAAGGAAAAGGCACAGAGAAGCATGTGTCGTTaGAGTCCTCGAAACTGGACCTCCCAGCCCATGCTC | + |
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Preference number: 4 (lower is better) Translates to: LIKEKAQRSMCR*SPRNWTSQPML Trigger: GAGCATGGGCTGGGAGGTCCAGTTTCGAGGACTCAAACGACACATGCTTCTCTGTGCCTTTTCCTTGATTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR GCA 90 bp | CATGTGTCGTTTGAGTCCTCGAAACTGGACCTCCCAGCCCATGCTCCCTATGAGTTTCACCTGGTTCAATaGATTTTCAAAGTCCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: HVSFESSKLDLPAHAPYEFHLVQ*IFKVLL Trigger: CAGCAGGACTTTGAAAATGCATTGAACCAGGTGAAA...CTCATAGGGAGCATGGGCTGGGAGGTCCAGTTTCGAGGACTCAAACGACACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR GCA 90 bp | ATCATAATTGCTACGTTAATCAAGGAAAAGGCACAGAGAAGCATGTGTCGTTTGCGTGTAAGAGGAGCATaGTTCCGGGCTCTGGCCGAG | + |
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Preference number: 4 (lower is better) Translates to: IIIATLIKEKAQRSMCRLRVRGA*FRALAE Trigger: CTCGGCCAGAGCCCGGAAGCATGCTCCTCTTACACG...CAAACGACACATGCTTCTCTGTGCCTTTTCCTTGATTAACGTAGCAATTATGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR GCA 90 bp | TTAATCAAGGAAAAGGCACAGAGAAGCATGTGTCGTTTGAGTCCTCGAAACTGGAGCCCAGGCCTCTCTTaGTGTCAGCTTCTTCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: LIKEKAQRSMCRLSPRNWSPGLS*CQLLPK Trigger: TTTGGGAAGAAGCTGACAGCAAGAGAGGCCTGGGCT...CCAGTTTCGAGGACTCAAACGACACATGCTTCTCTGTGCCTTTTCCTTGATTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR TCA 90 bp | AATCAAGGAAAAGGCACAGAGAAGCATGTGTCGTTTGAGTCCTCGAAACTGGACCCCACTTGGCTTTGTTaGCAAAGTCAAGCATACCAG | + |
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Preference number: 4 (lower is better) Translates to: NQGKGTEKHVSFESSKLDPTWLC*QSQAYQ Trigger: CTGGTATGCTTGACTTTGTCAACAAAGCCAAGTGGG...GTCCAGTTTCGAGGACTCAAACGACACATGCTTCTCTGTGCCTTTTCCTTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR CCA 90 bp | GTTAATCAAGGAAAAGGCACAGAGAAGCATGTGTCGTTTGAGTCCTCGAAACTGTACAGGGTCCTTCTGTaGCCTGCTTGTACAGTGCAT | + |
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Preference number: 4 (lower is better) Translates to: VNQGKGTEKHVSFESSKLYRVLL*PACTVH Trigger: ATGCACTGTACAAGCAGGCCACAGAAGGACCCTGTA...CAGTTTCGAGGACTCAAACGACACATGCTTCTCTGTGCCTTTTCCTTGATTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR GCA 90 bp | CATAATTGCTACGTTAATCAAGGAAAAGGCACAGAGAAGCATGTGTCGTTTGAGTTTCCTTGGGTAGGCTaGCCAGGGCATTCCATGCAT | + |
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Preference number: 4 (lower is better) Translates to: HNCYVNQGKGTEKHVSFEFPWVG*PGHSMH Trigger: ATGCATGGAATGCCCTGGGCAGCCTACCCAAGGAAA...CTCAAACGACACATGCTTCTCTGTGCCTTTTCCTTGATTAACGTAGCAATTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR GCA 90 bp | TTAATCAAGGAAAAGGCACAGAGAAGCATGTGTCGTTTGAGTCCTCGAAACTGGTCAGGTCATTCCCACTaGAGTAGTAGTCACCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: LIKEKAQRSMCRLSPRNWSGHSH*SSSHQF Trigger: GAACTGGTGACTACTACTGCAGTGGGAATGACCTGA...CCAGTTTCGAGGACTCAAACGACACATGCTTCTCTGTGCCTTTTCCTTGATTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR TCA 90 bp | TACGTTAATCAAGGAAAAGGCACAGAGAAGCATGTGTCGTTTGAGTCCTCGAAACCCACTTGGCTTTGTTaGCAAAGTCAAGCATACCAG | + |
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Preference number: 4 (lower is better) Translates to: YVNQGKGTEKHVSFESSKPTWLC*QSQAYQ Trigger: CTGGTATGCTTGACTTTGTCAACAAAGCCAAGTGGG...TTTCGAGGACTCAAACGACACATGCTTCTCTGTGCCTTTTCCTTGATTAACGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR GCA 90 bp | ATTGCTACGTTAATCAAGGAAAAGGCACAGAGAAGCATGTGTCGTTTGAGTCCTTCAGGTCATTCCCACTaGAGTAGTAGTCACCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: IATLIKEKAQRSMCRLSPSGHSH*SSSHQF Trigger: GAACTGGTGACTACTACTGCAGTGGGAATGACCTGA...AGGACTCAAACGACACATGCTTCTCTGTGCCTTTTCCTTGATTAACGTAGCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR GCA 90 bp | ATAATTGCTACGTTAATCAAGGAAAAGGCACAGAGAAGCATGTGTCGTTTGAGTAGCCCAGGCCTCTCTTaGTGTCAGCTTCTTCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: IIATLIKEKAQRSMCRLSSPGLS*CQLLPK Trigger: TTTGGGAAGAAGCTGACAGCAAGAGAGGCCTGGGCT...ACTCAAACGACACATGCTTCTCTGTGCCTTTTCCTTGATTAACGTAGCAATTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR CCA 90 bp | CAAGGAAAAGGCACAGAGAAGCATGTGTCGTTTGAGTCCTCGAAACTGGACCTCATATCCCGATACATCTaGAAGGATATGGCATTCTTT | + |
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Preference number: 4 (lower is better) Translates to: QGKGTEKHVSFESSKLDLISRYI*KDMAFF Trigger: AAAGAATGCCATATCCTTCCAGATGTATCGGGATAT...GAGGTCCAGTTTCGAGGACTCAAACGACACATGCTTCTCTGTGCCTTTTCCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR TCA 90 bp | ATTGCTACGTTAATCAAGGAAAAGGCACAGAGAAGCATGTGTCGTTTGAGTCCTTTTTCAAAGTCCTGCTaGCTGGCTCTCATTGTTGGT | + |
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Preference number: 4 (lower is better) Translates to: IATLIKEKAQRSMCRLSPFSKSC*LALIVG Trigger: ACCAACAATGAGAGCCAGTCAGCAGGACTTTGAAAA...AGGACTCAAACGACACATGCTTCTCTGTGCCTTTTCCTTGATTAACGTAGCAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110251.9 ENSMUST00000171229.8 |
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| CDS-3UTR GCA 90 bp | AATTCTCATCATAATTGCTACGTTAATCAAGGAAAAGGCACAGAGAAGCATGTGTTTCCTTGGGTAGGCTaGCCAGGGCATTCCATGCAT | + |
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Preference number: 4 (lower is better) Translates to: NSHHNCYVNQGKGTEKHVFPWVG*PGHSMH Trigger: ATGCATGGAATGCCCTGGGCAGCCTACCCAAGGAAA...CACATGCTTCTCTGTGCCTTTTCCTTGATTAACGTAGCAATTATGATGAGAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR CCA 90 bp | ATAATTGCTACGTTAATCAAGGAAAAGGCACAGAGAAGCATGTGTCGTTTGAGTTACAGGGTCCTTCTGTaGCCTGCTTGTACAGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: IIATLIKEKAQRSMCRLSYRVLL*PACTVH Trigger: ATGCACTGTACAAGCAGGCCACAGAAGGACCCTGTA...ACTCAAACGACACATGCTTCTCTGTGCCTTTTCCTTGATTAACGTAGCAATTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR TCA 90 bp | CATAATTGCTACGTTAATCAAGGAAAAGGCACAGAGAAGCATGTGTCGTTTGAGTTTTCAAAGTCCTGCTaGCTGGCTCTCATTGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HNCYVNQGKGTEKHVSFEFSKSC*LALIVG Trigger: ACCAACAATGAGAGCCAGTCAGCAGGACTTTGAAAA...CTCAAACGACACATGCTTCTCTGTGCCTTTTCCTTGATTAACGTAGCAATTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110251.9 ENSMUST00000171229.8 |
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| CDS-3UTR GCA 90 bp | AAGAATTCTCATCATAATTGCTACGTTAATCAAGGAAAAGGCACAGAGAAGCATTTTCCTTGGGTAGGCTaGCCAGGGCATTCCATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KNSHHNCYVNQGKGTEKHFPWVG*PGHSMH Trigger: ATGCATGGAATGCCCTGGGCAGCCTACCCAAGGAAA...ATGCTTCTCTGTGCCTTTTCCTTGATTAACGTAGCAATTATGATGAGAATTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR GCA 90 bp | AATCAAGGAAAAGGCACAGAGAAGCATGTGTCGTTTGAGTCCTCGAAACTGGACGCTGGCATTTTTAAGTaGGAGTATAATATCCCGATA | + |
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Preference number: 4 (lower is better) Translates to: NQGKGTEKHVSFESSKLDAGIFK*EYNIPI Trigger: TATCGGGATATTATACTCGCACTTAAAAATGCCAGC...GTCCAGTTTCGAGGACTCAAACGACACATGCTTCTCTGTGCCTTTTCCTTGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR CCA 90 bp | AAGAATTCTCATCATAATTGCTACGTTAATCAAGGAAAAGGCACAGAGAAGCATCCACATAGTTCTGCCTaGCAGTTTCCTTGGGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KNSHHNCYVNQGKGTEKHPHSSA*QFPWVG Trigger: GCCTACCCAAGGAAACTGCCAGGCAGAACTATGTGG...ATGCTTCTCTGTGCCTTTTCCTTGATTAACGTAGCAATTATGATGAGAATTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR TCA 90 bp | AGTACTGTGAAGAATTCTCATCATAATTGCTACGTTAATCAAGGAAAAGGCACACCCACTTGGCTTTGTTaGCAAAGTCAAGCATACCAG | + |
|
Preference number: 4 (lower is better) Translates to: STVKNSHHNCYVNQGKGTPTWLC*QSQAYQ Trigger: CTGGTATGCTTGACTTTGTCAACAAAGCCAAGTGGG...TGTGCCTTTTCCTTGATTAACGTAGCAATTATGATGAGAATTCTTCACAGTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR GCA 90 bp | CATAATTGCTACGTTAATCAAGGAAAAGGCACAGAGAAGCATGTGTCGTTTGAGGCTGGCATTTTTAAGTaGGAGTATAATATCCCGATA | + |
|
Preference number: 4 (lower is better) Translates to: HNCYVNQGKGTEKHVSFEAGIFK*EYNIPI Trigger: TATCGGGATATTATACTCGCACTTAAAAATGCCAGC...CTCAAACGACACATGCTTCTCTGTGCCTTTTCCTTGATTAACGTAGCAATTATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR CCA 90 bp | CATAATTGCTACGTTAATCAAGGAAAAGGCACAGAGAAGCATGTGTCGTTTGAGATATCCCGATACATCTaGAAGGATATGGCATTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HNCYVNQGKGTEKHVSFEISRYI*KDMAFF Trigger: AAAGAATGCCATATCCTTCCAGATGTATCGGGATAT...CTCAAACGACACATGCTTCTCTGTGCCTTTTCCTTGATTAACGTAGCAATTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR CCA 90 bp | ATTCTCATCATAATTGCTACGTTAATCAAGGAAAAGGCACAGAGAAGCATGTGTCATATGTTTTCAGCCTaGTCCAGACTTCTGTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ILIIIATLIKEKAQRSMCHMFSA*SRLLSQ Trigger: TTGAGACAGAAGTCTGGACCAGGCTGAAAACATATG...ACACATGCTTCTCTGTGCCTTTTCCTTGATTAACGTAGCAATTATGATGAGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR GCA 90 bp | AATTCTCATCATAATTGCTACGTTAATCAAGGAAAAGGCACAGAGAAGCATGTGTTTCACCTGGTTCAATaGATTTTCAAAGTCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NSHHNCYVNQGKGTEKHVFHLVQ*IFKVLL Trigger: CAGCAGGACTTTGAAAATGCATTGAACCAGGTGAAA...CACATGCTTCTCTGTGCCTTTTCCTTGATTAACGTAGCAATTATGATGAGAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
||
| CDS-3UTR GCA 90 bp | ATAATTGCTACGTTAATCAAGGAAAAGGCACAGAGAAGCATGTGTCGTTTGAGTGCTGGCATTTTTAAGTaGGAGTATAATATCCCGATA | + |
|
Preference number: 4 (lower is better) Translates to: IIATLIKEKAQRSMCRLSAGIFK*EYNIPI Trigger: TATCGGGATATTATACTCGCACTTAAAAATGCCAGC...ACTCAAACGACACATGCTTCTCTGTGCCTTTTCCTTGATTAACGTAGCAATTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR CAA 90 bp | GTGTCGTTTGAGTCCTCGAAACTGGACCTCCCAGCCCATGCTCCCTATGAGGAGGCATCTCAGCTGCCTTaGCTGAGCCCATCATCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: VSFESSKLDLPAHAPYEEASQLP*LSPSSS Trigger: CGAAGATGATGGGCTCAGCAAAGGCAGCTGAGATGC...CTCCTCATAGGGAGCATGGGCTGGGAGGTCCAGTTTCGAGGACTCAAACGACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS TCA 90 bp | GGCTTTCTCATCAGCTCCACGCTTTCCCTGGCTCGGGGCTTCAGATaGGGAACTCAAACTGGATACGAGATCCACATAGTTCTGCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GFLISSTLSLARGFR*GTQTGYEIHIVLPG Trigger: GCCAGGCAGAACTATGTGGATCTCGTATCCAGTTTGAGTTCCTCATCTGAAGCCCCGAGCCAGGGAAAGCGTGGAGCTGATGAGAAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000163280.8 ENSMUST00000167036.8 ENSMUST00000169759.2 ENSMUST00000170538.8 ENSMUST00000170989.8 ENSMUST00000171229.8 ENSMUST00000171258.8 ENSMUST00000178421.8 |
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| CDS-3UTR CAA 90 bp | CGAAACTGGACCTCCCAGCCCATGCTCCCTATGAGGAGTCTAGCTGCTGTGGTGACCGCAACCAGAGGCTaGGGAAAGTCTATAAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: RNWTSQPMLPMRSLAAVVTATRG*GKSIKL Trigger: CAGTTTTATAGACTTTCCCAAGCCTCTGGTTGCGGT...CACCACAGCAGCTAGACTCCTCATAGGGAGCATGGGCTGGGAGGTCCAGTTTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS CCA 90 bp | CTCCACGCTTTCCCTGGCTCGGGGCTTCAGATGAGGAACTCAAACTaGATACGAGATCCACATAGTTCTGCCTGGCAGTTTCCTTGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LHAFPGSGLQMRNSN*IRDPHSSAWQFPWV Trigger: TACCCAAGGAAACTGCCAGGCAGAACTATGTGGATCTCGTATCCAGTTTGAGTTCCTCATCTGAAGCCCCGAGCCAGGGAAAGCGTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000163280.8 ENSMUST00000167036.8 ENSMUST00000169759.2 ENSMUST00000170538.8 ENSMUST00000170989.8 ENSMUST00000171229.8 ENSMUST00000171258.8 ENSMUST00000178421.8 |
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| CDS TCA 90 bp | GAAACGTGTAAGAGGAGCATGCTTCCGGGCTCTGGCCGAGTTGGCTaGATGGAGTATGAAACGTTGCCCTGTCTGATGCAAAGACAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: ETCKRSMLPGSGRVG*MEYETLPCLMQRQH Trigger: ATGCTGTCTTTGCATCAGACAGGGCAACGTTTCATACTCCATTCAGCCAACTCGGCCAGAGCCCGGAAGCATGCTCCTCTTACACGTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS TCA 90 bp | TGCTGTCAGCTTCTTCCCAAAGAGAAGCATCTCAGCTGCCTTTGCTaGGCCCATCATCTTCGGAAACGTGTAAGAGGAGCATGCTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: CCQLLPKEKHLSCLC*AHHLRKRVRGACFR Trigger: CCGGAAGCATGCTCCTCTTACACGTTTCCGAAGATGATGGGCTCAGCAAAGGCAGCTGAGATGCTTCTCTTTGGGAAGAAGCTGACAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR CAA 90 bp | GTGTCGTTTGAGTCCTCGAAACTGGACCTCCCAGCCCATGCTCCCTATGAGGAGGCATCCCACTTGGCTTaGTTGACAAAGTCAAGCATA | + |
|
Preference number: 5 (lower is better) Translates to: VSFESSKLDLPAHAPYEEASHLA*LTKSSI Trigger: TATGCTTGACTTTGTCAACAAAGCCAAGTGGGATGC...CTCCTCATAGGGAGCATGGGCTGGGAGGTCCAGTTTCGAGGACTCAAACGACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR CAA 90 bp | TCCTCGAAACTGGACCTCCCAGCCCATGCTCCCTATGAGGAGTCTAGCTGCTGTTTCCATGCATCCCACTaGGCTTTGTTGACAAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSKLDLPAHAPYEESSCCFHASH*ALLTKS Trigger: TGACTTTGTCAACAAAGCCAAGTGGGATGCATGGAA...ACAGCAGCTAGACTCCTCATAGGGAGCATGGGCTGGGAGGTCCAGTTTCGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS TCA 90 bp | TTGCCCTGTCTGATGCAAAGACAGCATCAAATAGTCCCAGAAGGGTaGCAGAGATTCCCACAGCTGGGCCATTTACTACCGCAACCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LPCLMQRQHQIVPEG*QRFPQLGHLLPQPE Trigger: CTCTGGTTGCGGTAGTAAATGGCCCAGCTGTGGGAATCTCTGTCACCCTTCTGGGACTATTTGATGCTGTCTTTGCATCAGACAGGGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR CAA 90 bp | CATGTGTCGTTTGAGTCCTCGAAACTGGACCTCCCAGCCCATGCTCCCTATGAGTCCCACTTGGCTTTGTaGACAAAGTCAAGCATACCA | + |
|
Preference number: 5 (lower is better) Translates to: HVSFESSKLDLPAHAPYESHLAL*TKSSIP Trigger: TGGTATGCTTGACTTTGTCAACAAAGCCAAGTGGGA...CTCATAGGGAGCATGGGCTGGGAGGTCCAGTTTCGAGGACTCAAACGACACATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR CAA 90 bp | TCGTTTGAGTCCTCGAAACTGGACCTCCCAGCCCATGCTCCCTATGAGGAGTCTATGGAGTATGAAACGTaGCCCTGTCTGATGCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SFESSKLDLPAHAPYEESMEYET*PCLMQR Trigger: TCTTTGCATCAGACAGGGCAACGTTTCATACTCCAT...AGACTCCTCATAGGGAGCATGGGCTGGGAGGTCCAGTTTCGAGGACTCAAACGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS GCA 90 bp | CACTTCGTTTCCCGGGTCCTTCTTCAAGAGTTTCACCTGGTTCAATaGATTTTCAAAGTCCTGCTGACTGGCTCTCATTGTTGGTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: HFVSRVLLQEFHLVQ*IFKVLLTGSHCWSA Trigger: GGCAGACCAACAATGAGAGCCAGTCAGCAGGACTTTGAAAATGCATTGAACCAGGTGAAACTCTTGAAGAAGGACCCGGGAAACGAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110251.9 ENSMUST00000171229.8 |
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| CDS-3UTR CAA 90 bp | AAGGAAAAGGCACAGAGAAGCATGTGTCGTTTGAGTCCTCGAAACTGGACCTCCTCCCACTTGGCTTTGTaGACAAAGTCAAGCATACCA | + |
|
Preference number: 5 (lower is better) Translates to: KEKAQRSMCRLSPRNWTSSHLAL*TKSSIP Trigger: TGGTATGCTTGACTTTGTCAACAAAGCCAAGTGGGA...GGAGGTCCAGTTTCGAGGACTCAAACGACACATGCTTCTCTGTGCCTTTTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR CAA 90 bp | CAAGGAAAAGGCACAGAGAAGCATGTGTCGTTTGAGTCCTCGAAACTGGACCTCTCCCACTTGGCTTTGTaGACAAAGTCAAGCATACCA | + |
|
Preference number: 5 (lower is better) Translates to: QGKGTEKHVSFESSKLDLSHLAL*TKSSIP Trigger: TGGTATGCTTGACTTTGTCAACAAAGCCAAGTGGGA...GAGGTCCAGTTTCGAGGACTCAAACGACACATGCTTCTCTGTGCCTTTTCCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR CAA 90 bp | ATTGCTACGTTAATCAAGGAAAAGGCACAGAGAAGCATGTGTCGTTTGAGTCCTGCATCTCAGCTGCCTTaGCTGAGCCCATCATCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: IATLIKEKAQRSMCRLSPASQLP*LSPSSS Trigger: CGAAGATGATGGGCTCAGCAAAGGCAGCTGAGATGC...AGGACTCAAACGACACATGCTTCTCTGTGCCTTTTCCTTGATTAACGTAGCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR CAA 90 bp | TACGTTAATCAAGGAAAAGGCACAGAGAAGCATGTGTCGTTTGAGTCCTCGAAAGCTGACTGGCTCTCATaGTTGGTCTGCCCAAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: YVNQGKGTEKHVSFESSKADWLS*LVCPSA Trigger: TGCACTTGGGCAGACCAACAATGAGAGCCAGTCAGC...TTTCGAGGACTCAAACGACACATGCTTCTCTGTGCCTTTTCCTTGATTAACGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110251.9 ENSMUST00000171229.8 |
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| CDS-3UTR CAA 90 bp | AATTGCTACGTTAATCAAGGAAAAGGCACAGAGAAGCATGTGTCGTTTGAGTCCGCTGACTGGCTCTCATaGTTGGTCTGCCCAAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: NCYVNQGKGTEKHVSFESADWLS*LVCPSA Trigger: TGCACTTGGGCAGACCAACAATGAGAGCCAGTCAGC...GGACTCAAACGACACATGCTTCTCTGTGCCTTTTCCTTGATTAACGTAGCAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110251.9 ENSMUST00000171229.8 |
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| CDS TCA 90 bp | TTCTTCAAGAGTTTCACCTGGTTCAATGCATTTTCAAAGTCCTGCTaGCTGGCTCTCATTGTTGGTCTGCCCAAGTGCAGTTTAGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: FFKSFTWFNAFSKSC*LALIVGLPKCSLAT Trigger: AGTGGCTAAACTGCACTTGGGCAGACCAACAATGAGAGCCAGTCAGCAGGACTTTGAAAATGCATTGAACCAGGTGAAACTCTTGAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110251.9 ENSMUST00000171229.8 |
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| CDS-3UTR CAA 90 bp | TTAATCAAGGAAAAGGCACAGAGAAGCATGTGTCGTTTGAGTCCTCGAAACTGGACCGCAACCAGAGGCTaGGGAAAGTCTATAAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: LIKEKAQRSMCRLSPRNWTATRG*GKSIKL Trigger: CAGTTTTATAGACTTTCCCAAGCCTCTGGTTGCGGT...CCAGTTTCGAGGACTCAAACGACACATGCTTCTCTGTGCCTTTTCCTTGATTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR CAA 90 bp | ATAATTGCTACGTTAATCAAGGAAAAGGCACAGAGAAGCATGTGTCGTTTGAGTGCATCTCAGCTGCCTTaGCTGAGCCCATCATCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: IIATLIKEKAQRSMCRLSASQLP*LSPSSS Trigger: CGAAGATGATGGGCTCAGCAAAGGCAGCTGAGATGC...ACTCAAACGACACATGCTTCTCTGTGCCTTTTCCTTGATTAACGTAGCAATTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR CAA 90 bp | TTAATCAAGGAAAAGGCACAGAGAAGCATGTGTCGTTTGAGTCCTCGAAACTGGTTCCATGCATCCCACTaGGCTTTGTTGACAAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LIKEKAQRSMCRLSPRNWFHASH*ALLTKS Trigger: TGACTTTGTCAACAAAGCCAAGTGGGATGCATGGAA...CCAGTTTCGAGGACTCAAACGACACATGCTTCTCTGTGCCTTTTCCTTGATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR CAA 90 bp | AATTGCTACGTTAATCAAGGAAAAGGCACAGAGAAGCATGTGTCGTTTGAGTCCACCGCAACCAGAGGCTaGGGAAAGTCTATAAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: NCYVNQGKGTEKHVSFESTATRG*GKSIKL Trigger: CAGTTTTATAGACTTTCCCAAGCCTCTGGTTGCGGT...GGACTCAAACGACACATGCTTCTCTGTGCCTTTTCCTTGATTAACGTAGCAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR CAA 90 bp | ATTGCTACGTTAATCAAGGAAAAGGCACAGAGAAGCATGTGTCGTTTGAGTCCTTTCCATGCATCCCACTaGGCTTTGTTGACAAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: IATLIKEKAQRSMCRLSPFHASH*ALLTKS Trigger: TGACTTTGTCAACAAAGCCAAGTGGGATGCATGGAA...AGGACTCAAACGACACATGCTTCTCTGTGCCTTTTCCTTGATTAACGTAGCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR CAA 90 bp | TACGTTAATCAAGGAAAAGGCACAGAGAAGCATGTGTCGTTTGAGTCCTCGAAAATGGAGTATGAAACGTaGCCCTGTCTGATGCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: YVNQGKGTEKHVSFESSKMEYET*PCLMQR Trigger: TCTTTGCATCAGACAGGGCAACGTTTCATACTCCAT...TTTCGAGGACTCAAACGACACATGCTTCTCTGTGCCTTTTCCTTGATTAACGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
||
| CDS-3UTR CAA 90 bp | AGTACTGTGAAGAATTCTCATCATAATTGCTACGTTAATCAAGGAAAAGGCACAGCATCTCAGCTGCCTTaGCTGAGCCCATCATCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: STVKNSHHNCYVNQGKGTASQLP*LSPSSS Trigger: CGAAGATGATGGGCTCAGCAAAGGCAGCTGAGATGC...TGTGCCTTTTCCTTGATTAACGTAGCAATTATGATGAGAATTCTTCACAGTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS GCA 90 bp | TGTGAAAACAGCCATGACAGTGTTATCAGTGCTGGCATTTTTAAGTaGGAGTATAATATCCCGATACATCTGGAAGGATATGGCATTCTT | + |
|
Preference number: 5 (lower is better) Translates to: CENSHDSVISAGIFK*EYNIPIHLEGYGIL Trigger: AAGAATGCCATATCCTTCCAGATGTATCGGGATATTATACTCGCACTTAAAAATGCCAGCACTGATAACACTGTCATGGCTGTTTTCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000163280.8 ENSMUST00000167036.8 ENSMUST00000170538.8 ENSMUST00000170989.8 ENSMUST00000171229.8 ENSMUST00000171258.8 ENSMUST00000178421.8 |
||
| CDS-3UTR CAA 90 bp | AGTACTGTGAAGAATTCTCATCATAATTGCTACGTTAATCAAGGAAAAGGCACAACCGCAACCAGAGGCTaGGGAAAGTCTATAAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: STVKNSHHNCYVNQGKGTTATRG*GKSIKL Trigger: CAGTTTTATAGACTTTCCCAAGCCTCTGGTTGCGGT...TGTGCCTTTTCCTTGATTAACGTAGCAATTATGATGAGAATTCTTCACAGTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR CAA 90 bp | AAGAATTCTCATCATAATTGCTACGTTAATCAAGGAAAAGGCACAGAGAAGCATTCCCACTTGGCTTTGTaGACAAAGTCAAGCATACCA | + |
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Preference number: 5 (lower is better) Translates to: KNSHHNCYVNQGKGTEKHSHLAL*TKSSIP Trigger: TGGTATGCTTGACTTTGTCAACAAAGCCAAGTGGGA...ATGCTTCTCTGTGCCTTTTCCTTGATTAACGTAGCAATTATGATGAGAATTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR CAA 90 bp | AAGAATTCTCATCATAATTGCTACGTTAATCAAGGAAAAGGCACAGAGAAGCATTTCCATGCATCCCACTaGGCTTTGTTGACAAAGTCA | + |
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Preference number: 5 (lower is better) Translates to: KNSHHNCYVNQGKGTEKHFHASH*ALLTKS Trigger: TGACTTTGTCAACAAAGCCAAGTGGGATGCATGGAA...ATGCTTCTCTGTGCCTTTTCCTTGATTAACGTAGCAATTATGATGAGAATTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS-3UTR CAA 90 bp | AGTACTGTGAAGAATTCTCATCATAATTGCTACGTTAATCAAGGAAAAGGCACAATGGAGTATGAAACGTaGCCCTGTCTGATGCAAAGA | + |
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Preference number: 5 (lower is better) Translates to: STVKNSHHNCYVNQGKGTMEYET*PCLMQR Trigger: TCTTTGCATCAGACAGGGCAACGTTTCATACTCCAT...TGTGCCTTTTCCTTGATTAACGTAGCAATTATGATGAGAATTCTTCACAGTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS CCA 72 bp | GACTCCCGGGCTTTCTCATCAGCTCCACGCTTTCCCTaGCTCGGGGCTTCAGATGAGGAACTCAAACTGGAT | + |
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Preference number: 6 (lower is better) Translates to: DSRAFSSAPRFP*LGASDEELKLD Trigger: ATCCAGTTTGAGTTCCTCATCTGAAGCCCCGAGCCAGGGAAAGCGTGGAGCTGATGAGAAAGCCCGGGAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000163280.8 ENSMUST00000167036.8 ENSMUST00000169759.2 ENSMUST00000170538.8 ENSMUST00000170989.8 ENSMUST00000171229.8 ENSMUST00000171258.8 ENSMUST00000178421.8 |
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| CDS TCA 72 bp | GCTTCCGGGCTCTGGCCGAGTTGGCTGAATGGAGTATaGAACGTTGCCCTGTCTGATGCAAAGACAGCATCA | + |
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Preference number: 6 (lower is better) Translates to: ASGLWPSWLNGV*NVALSDAKTAS Trigger: TGATGCTGTCTTTGCATCAGACAGGGCAACGTTTCATACTCCATTCAGCCAACTCGGCCAGAGCCCGGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS TCA 72 bp | AAGAGGAGCATGCTTCCGGGCTCTGGCCGAGTTGGCTaGATGGAGTATGAAACGTTGCCCTGTCTGATGCAA | + |
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Preference number: 6 (lower is better) Translates to: KRSMLPGSGRVG*MEYETLPCLMQ Trigger: TTGCATCAGACAGGGCAACGTTTCATACTCCATTCAGCCAACTCGGCCAGAGCCCGGAAGCATGCTCCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS TCA 72 bp | GGAGACGAAGCTCATGATTGCGTTCATGCACTCCTCTaGCAGCCACCTTGCTTGCAGAGTAGTGCACTCTTC | + |
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Preference number: 6 (lower is better) Translates to: GDEAHDCVHALL*QPPCLQSSALF Trigger: GAAGAGTGCACTACTCTGCAAGCAAGGTGGCTGTCAGAGGAGTGCATGAACGCAATCATGAGCTTCGTCTCC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS GCA 72 bp | AACTTCAGTGACAAGGCCTTGAGCCCAGGCCTCTCTTaGTGTCAGCTTCTTCCCAAAGAGAAGCATCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: NFSDKALSPGLS*CQLLPKEKHLS Trigger: GCTGAGATGCTTCTCTTTGGGAAGAAGCTGACAGCAAGAGAGGCCTGGGCTCAAGGCCTTGTCACTGAAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS CCA 72 bp | AACTCAAACTGGATACGAGATCCACATAGTTCTGCCTaGCAGTTTCCTTGGGTAGGCTGCCCAGGGCATTCC | + |
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Preference number: 6 (lower is better) Translates to: NSNWIRDPHSSA*QFPWVGCPGHS Trigger: GGAATGCCCTGGGCAGCCTACCCAAGGAAACTGCCAGGCAGAACTATGTGGATCTCGTATCCAGTTTGAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000163280.8 ENSMUST00000167036.8 ENSMUST00000169759.2 ENSMUST00000170538.8 ENSMUST00000170989.8 ENSMUST00000171229.8 ENSMUST00000171258.8 ENSMUST00000178421.8 |
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| CDS CCA 72 bp | TGGCGTTTGGCGGGAGCTTCGCATATGTTTTCAGCCTaGTCCAGACTTCTGTCTCAAAAGTGCTCTCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: WRLAGASHMFSA*SRLLSQKCSQG Trigger: TCCCTGAGAGCACTTTTGAGACAGAAGTCTGGACCAGGCTGAAAACATATGCGAAGCTCCCGCCAAACGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS CAA 90 bp | TTGGGTAGGCTGCCCAGGGCATTCCATGCATCCCACTTGGCTTTGTaGACAAAGTCAAGCATACCAGGCTTAGGCATATTACAGGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: LGRLPRAFHASHLAL*TKSSIPGLGILQGP Trigger: AGGACCCTGTAATATGCCTAAGCCTGGTATGCTTGACTTTGTCAACAAAGCCAAGTGGGATGCATGGAATGCCCTGGGCAGCCTACCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000163280.8 ENSMUST00000167036.8 ENSMUST00000169759.2 ENSMUST00000170538.8 ENSMUST00000170989.8 ENSMUST00000171229.8 ENSMUST00000171258.8 ENSMUST00000178421.8 |
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| CDS CAA 90 bp | TCCTTGGGTAGGCTGCCCAGGGCATTCCATGCATCCCACTTGGCTTaGTTGACAAAGTCAAGCATACCAGGCTTAGGCATATTACAGGGT | + |
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Preference number: 6 (lower is better) Translates to: SLGRLPRAFHASHLA*LTKSSIPGLGILQG Trigger: ACCCTGTAATATGCCTAAGCCTGGTATGCTTGACTTTGTCAACAAAGCCAAGTGGGATGCATGGAATGCCCTGGGCAGCCTACCCAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000163280.8 ENSMUST00000167036.8 ENSMUST00000169759.2 ENSMUST00000170538.8 ENSMUST00000170989.8 ENSMUST00000171229.8 ENSMUST00000171258.8 ENSMUST00000178421.8 |
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| CDS CAA 90 bp | AACGTGATCTTCGTGATACCATCTTCAGAAGTTACCAGGATGTCTTaGGACTCCCGGGCTTTCTCATCAGCTCCACGCTTTCCCTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: NVIFVIPSSEVTRMS*DSRAFSSAPRFPWL Trigger: GAGCCAGGGAAAGCGTGGAGCTGATGAGAAAGCCCGGGAGTCCAAAGACATCCTGGTAACTTCTGAAGATGGTATCACGAAGATCACGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000163280.8 ENSMUST00000167036.8 ENSMUST00000169759.2 ENSMUST00000170538.8 ENSMUST00000170989.8 ENSMUST00000171229.8 ENSMUST00000171258.8 ENSMUST00000178421.8 |
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| CDS CCA 72 bp | TTCCCTGGCTCGGGGCTTCAGATGAGGAACTCAAACTaGATACGAGATCCACATAGTTCTGCCTGGCAGTTT | + |
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Preference number: 6 (lower is better) Translates to: FPGSGLQMRNSN*IRDPHSSAWQF Trigger: AAACTGCCAGGCAGAACTATGTGGATCTCGTATCCAGTTTGAGTTCCTCATCTGAAGCCCCGAGCCAGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000163280.8 ENSMUST00000167036.8 ENSMUST00000169759.2 ENSMUST00000170538.8 ENSMUST00000170989.8 ENSMUST00000171229.8 ENSMUST00000171258.8 ENSMUST00000178421.8 |
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| CDS CAA 72 bp | AGGCTGCCCAGGGCATTCCATGCATCCCACTTGGCTTaGTTGACAAAGTCAAGCATACCAGGCTTAGGCATA | + |
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Preference number: 6 (lower is better) Translates to: RLPRAFHASHLA*LTKSSIPGLGI Trigger: TATGCCTAAGCCTGGTATGCTTGACTTTGTCAACAAAGCCAAGTGGGATGCATGGAATGCCCTGGGCAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000163280.8 ENSMUST00000167036.8 ENSMUST00000169759.2 ENSMUST00000170538.8 ENSMUST00000170989.8 ENSMUST00000171229.8 ENSMUST00000171258.8 ENSMUST00000178421.8 |
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| CDS CAA 90 bp | GCAGTTTCCTTGGGTAGGCTGCCCAGGGCATTCCATGCATCCCACTaGGCTTTGTTGACAAAGTCAAGCATACCAGGCTTAGGCATATTA | + |
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Preference number: 6 (lower is better) Translates to: AVSLGRLPRAFHASH*ALLTKSSIPGLGIL Trigger: TAATATGCCTAAGCCTGGTATGCTTGACTTTGTCAACAAAGCCAAGTGGGATGCATGGAATGCCCTGGGCAGCCTACCCAAGGAAACTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000163280.8 ENSMUST00000167036.8 ENSMUST00000169759.2 ENSMUST00000170538.8 ENSMUST00000170989.8 ENSMUST00000171229.8 ENSMUST00000171258.8 ENSMUST00000178421.8 |
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| CDS CAA 90 bp | CTCTTGCTGTCAGCTTCTTCCCAAAGAGAAGCATCTCAGCTGCCTTaGCTGAGCCCATCATCTTCGGAAACGTGTAAGAGGAGCATGCTT | + |
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Preference number: 6 (lower is better) Translates to: LLLSASSQREASQLP*LSPSSSETCKRSML Trigger: AAGCATGCTCCTCTTACACGTTTCCGAAGATGATGGGCTCAGCAAAGGCAGCTGAGATGCTTCTCTTTGGGAAGAAGCTGACAGCAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS TCA 72 bp | CTGATGCAAAGACAGCATCAAATAGTCCCAGAAGGGTaGCAGAGATTCCCACAGCTGGGCCATTTACTACCG | + |
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Preference number: 6 (lower is better) Translates to: LMQRQHQIVPEG*QRFPQLGHLLP Trigger: CGGTAGTAAATGGCCCAGCTGTGGGAATCTCTGTCACCCTTCTGGGACTATTTGATGCTGTCTTTGCATCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000170538.8 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS TCA 72 bp | CTTCTTCCCAAAGAGAAGCATCTCAGCTGCCTTTGCTaGGCCCATCATCTTCGGAAACGTGTAAGAGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: LLPKEKHLSCLC*AHHLRKRVRGA Trigger: TGCTCCTCTTACACGTTTCCGAAGATGATGGGCTCAGCAAAGGCAGCTGAGATGCTTCTCTTTGGGAAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS CAA 72 bp | TCAGCTTCTTCCCAAAGAGAAGCATCTCAGCTGCCTTaGCTGAGCCCATCATCTTCGGAAACGTGTAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: SASSQREASQLP*LSPSSSETCKR Trigger: CCTCTTACACGTTTCCGAAGATGATGGGCTCAGCAAAGGCAGCTGAGATGCTTCTCTTTGGGAAGAAGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS CAA 72 bp | CTGCCCAGGGCATTCCATGCATCCCACTTGGCTTTGTaGACAAAGTCAAGCATACCAGGCTTAGGCATATTA | + |
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Preference number: 6 (lower is better) Translates to: LPRAFHASHLAL*TKSSIPGLGIL Trigger: TAATATGCCTAAGCCTGGTATGCTTGACTTTGTCAACAAAGCCAAGTGGGATGCATGGAATGCCCTGGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000163280.8 ENSMUST00000167036.8 ENSMUST00000169759.2 ENSMUST00000170538.8 ENSMUST00000170989.8 ENSMUST00000171229.8 ENSMUST00000171258.8 ENSMUST00000178421.8 |
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| CDS CAA 72 bp | TTCGTGATACCATCTTCAGAAGTTACCAGGATGTCTTaGGACTCCCGGGCTTTCTCATCAGCTCCACGCTTT | + |
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Preference number: 6 (lower is better) Translates to: FVIPSSEVTRMS*DSRAFSSAPRF Trigger: AAAGCGTGGAGCTGATGAGAAAGCCCGGGAGTCCAAAGACATCCTGGTAACTTCTGAAGATGGTATCACGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000163280.8 ENSMUST00000167036.8 ENSMUST00000169759.2 ENSMUST00000170538.8 ENSMUST00000170989.8 ENSMUST00000171229.8 ENSMUST00000171258.8 ENSMUST00000178421.8 |
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| CDS CAA 72 bp | CCCACAGCTGGGCCATTTACTACCGCAACCAGAGGCTaGGGAAAGTCTATAAAACTGTTTACAAAGTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: PTAGPFTTATRG*GKSIKLFTKSL Trigger: GAGGGACTTTGTAAACAGTTTTATAGACTTTCCCAAGCCTCTGGTTGCGGTAGTAAATGGCCCAGCTGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000163280.8 ENSMUST00000170538.8 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS GCA 72 bp | TCCCGGGTCCTTCTTCAAGAGTTTCACCTGGTTCAATaGATTTTCAAAGTCCTGCTGACTGGCTCTCATTGT | + |
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Preference number: 6 (lower is better) Translates to: SRVLLQEFHLVQ*IFKVLLTGSHC Trigger: ACAATGAGAGCCAGTCAGCAGGACTTTGAAAATGCATTGAACCAGGTGAAACTCTTGAAGAAGGACCCGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110251.9 ENSMUST00000171229.8 |
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| CDS CAA 90 bp | ACAGAGATTCCCACAGCTGGGCCATTTACTACCGCAACCAGAGGCTaGGGAAAGTCTATAAAACTGTTTACAAAGTCCCTCAGTAACACA | + |
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Preference number: 6 (lower is better) Translates to: TEIPTAGPFTTATRG*GKSIKLFTKSLSNT Trigger: TGTGTTACTGAGGGACTTTGTAAACAGTTTTATAGACTTTCCCAAGCCTCTGGTTGCGGTAGTAAATGGCCCAGCTGTGGGAATCTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000163280.8 ENSMUST00000170538.8 ENSMUST00000171229.8 ENSMUST00000178421.8 |
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| CDS CAA 72 bp | ATATCCCGATACATCTGGAAGGATATGGCATTCTTTTaGGTGGGCCGATTGAACGTGATCTTCGTGATACCA | + |
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Preference number: 6 (lower is better) Translates to: ISRYIWKDMAFF*VGRLNVIFVIP Trigger: TGGTATCACGAAGATCACGTTCAATCGGCCCACCAAAAAGAATGCCATATCCTTCCAGATGTATCGGGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000021854.14 ENSMUST00000110251.9 ENSMUST00000163280.8 ENSMUST00000167036.8 ENSMUST00000170538.8 ENSMUST00000170989.8 ENSMUST00000171229.8 ENSMUST00000171258.8 ENSMUST00000178421.8 |
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