Pregenerated sensors for ECI1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024132Ensembl transcript IDs: ENSMUST00000024946.7, ENSMUST00000234023.2, ENSMUST00000234150.2, ENSMUST00000234304.2
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AAGGTTAGGAACACAAGAGCTAAGAGAGTTTTGAAGTTGAAGAATACCTTGTTTAATCTTTGGGACCAGTaGGTCCCTAGAAGGCACATA | + |
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Preference number: 2 (lower is better) Translates to: KVRNTRAKRVLKLKNTLFNLWDQ*VPRRHI Trigger: TATGTGCCTTCTAGGGACCCACTGGTCCCAAAGATT...AAACAAGGTATTCTTCAACTTCAAAACTCTCTTAGCTCTTGTGTTCCTAACCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234023.2 |
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| CDS-3UTR TCA 90 bp | AAGGTTAGGAACACAAGAGCTAAGAGAGTTTTGAAGTTGAAGAATACCTTGTTTAAAAGGGTCCCCAGCTaGAGGGCACGCTCCGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: KVRNTRAKRVLKLKNTLFKRVPS*RARSAS Trigger: GGAGGCGGAGCGTGCCCTTCAGCTGGGGACCCTTTT...AAACAAGGTATTCTTCAACTTCAAAACTCTCTTAGCTCTTGTGTTCCTAACCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000234023.2 |
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| CDS-3UTR TCA 90 bp | AAGGTTAGGAACACAAGAGCTAAGAGAGTTTTGAAGTTGAAGAATACCTTGTTTGAGGGCCTCTGCTGGTaGGAAAAGGGTCCCCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: KVRNTRAKRVLKLKNTLFEGLCW*EKGPQL Trigger: CAGCTGGGGACCCTTTTCTCACCAGCAGAGGCCCTC...AAACAAGGTATTCTTCAACTTCAAAACTCTCTTAGCTCTTGTGTTCCTAACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000234023.2 |
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| CDS-3UTR TCA 90 bp | AAGGTTAGGAACACAAGAGCTAAGAGAGTTTTGAAGTTGAAGAATACCTTGTTTCCACCACTCCCACCTTaGGGGCCTCTGCTGGTGAGA | + |
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Preference number: 4 (lower is better) Translates to: KVRNTRAKRVLKLKNTLFPPLPP*GPLLVR Trigger: TCTCACCAGCAGAGGCCCTCAAGGTGGGAGTGGTGG...AAACAAGGTATTCTTCAACTTCAAAACTCTCTTAGCTCTTGTGTTCCTAACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234023.2 |
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| CDS-3UTR GCA 90 bp | AAGGTTAGGAACACAAGAGCTAAGAGAGTTTTGAAGTTGAAGAATACCTTGTTTCGCTCCGCCTCCCGGTaGCCGATGGTGTTCACATAC | + |
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Preference number: 4 (lower is better) Translates to: KVRNTRAKRVLKLKNTLFRSASR*PMVFTY Trigger: GTATGTGAACACCATCGGGCACCGGGAGGCGGAGCG...AAACAAGGTATTCTTCAACTTCAAAACTCTCTTAGCTCTTGTGTTCCTAACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234023.2 |
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| CDS-3UTR TCA 90 bp | AAGGTTAGGAACACAAGAGCTAAGAGAGTTTTGAAGTTGAAGAATACCTTGTTTCAGCCTCTCGCTGCTTaGTCAGGTTGTCTGCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: KVRNTRAKRVLKLKNTLFQPLAA*SGCLRW Trigger: CCACCGCAGACAACCTGATCAAGCAGCGAGAGGCTG...AAACAAGGTATTCTTCAACTTCAAAACTCTCTTAGCTCTTGTGTTCCTAACCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234023.2 |
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| CDS-3UTR CCA 90 bp | AAGGTTAGGAACACAAGAGCTAAGAGAGTTTTGAAGTTGAAGAATACCTTGTTTGAGGCACCCTCCAGCTaGAGAGGCTCCATTGATGGC | + |
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Preference number: 4 (lower is better) Translates to: KVRNTRAKRVLKLKNTLFEAPSS*RGSIDG Trigger: GCCATCAATGGAGCCTCTCCAGCTGGAGGGTGCCTC...AAACAAGGTATTCTTCAACTTCAAAACTCTCTTAGCTCTTGTGTTCCTAACCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234023.2 |
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| CDS-3UTR TCA 90 bp | AAGGTTAGGAACACAAGAGCTAAGAGAGTTTTGAAGTTGAAGAATACCTTGTTTCAAGTCCAGGCCAGCTaGGAAGATACCCGGGCATTC | + |
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Preference number: 4 (lower is better) Translates to: KVRNTRAKRVLKLKNTLFQVQAS*EDTRAF Trigger: GAATGCCCGGGTATCTTCTCAGCTGGCCTGGACTTG...AAACAAGGTATTCTTCAACTTCAAAACTCTCTTAGCTCTTGTGTTCCTAACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234023.2 |
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| CDS-3UTR GCA 90 bp | AAGGTTAGGAACACAAGAGCTAAGAGAGTTTTGAAGTTGAAGAATACCTTGTTTCTCAGCCACAGCTCCTaGACGTTCTTCCAGTACTCA | + |
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Preference number: 4 (lower is better) Translates to: KVRNTRAKRVLKLKNTLFLSHSS*TFFQYS Trigger: TGAGTACTGGAAGAACGTGCAGGAGCTGTGGCTGAG...AAACAAGGTATTCTTCAACTTCAAAACTCTCTTAGCTCTTGTGTTCCTAACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234023.2 |
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| CDS-3UTR GCA 90 bp | AAGGTTAGGAACACAAGAGCTAAGAGAGTTTTGAAGTTGAAGAATACCTTGTTTAGAAGGGGGCAACAATaGCCAGCAGGCTCTCATTCA | + |
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Preference number: 4 (lower is better) Translates to: KVRNTRAKRVLKLKNTLFRRGQQ*PAGSHS Trigger: TGAATGAGAGCCTGCTGGGCATTGTTGCCCCCTTCT...AAACAAGGTATTCTTCAACTTCAAAACTCTCTTAGCTCTTGTGTTCCTAACCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234023.2 |
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| CDS-3UTR GCA 90 bp | AAGGTTAGGAACACAAGAGCTAAGAGAGTTTTGAAGTTGAAGAATACCTTGTTTTCACTGAGCGAGCCTTaGTGTGTACCTGATCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: KVRNTRAKRVLKLKNTLFSLSEP*CVPDPQ Trigger: CTGAGGATCAGGTACACAGCAAGGCTCGCTCAGTGA...AAACAAGGTATTCTTCAACTTCAAAACTCTCTTAGCTCTTGTGTTCCTAACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234023.2 |
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| CDS-3UTR GCA 90 bp | AAGGTTAGGAACACAAGAGCTAAGAGAGTTTTGAAGTTGAAGAATACCTTGTTTCTTGATCAGGTTGTCTaGGGTGGCCTTTCGCATCAT | + |
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Preference number: 4 (lower is better) Translates to: KVRNTRAKRVLKLKNTLFLDQVV*GGLSHH Trigger: ATGATGCGAAAGGCCACCGCAGACAACCTGATCAAG...AAACAAGGTATTCTTCAACTTCAAAACTCTCTTAGCTCTTGTGTTCCTAACCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234023.2 |
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| CDS-3UTR CCA 90 bp | AAGGTTAGGAACACAAGAGCTAAGAGAGTTTTGAAGTTGAAGAATACCTTGTTTATGTGTAGGGACTTCTaGATGGAGTCTTTGGAGATG | + |
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Preference number: 4 (lower is better) Translates to: KVRNTRAKRVLKLKNTLFMCRDF*MESLEM Trigger: CATCTCCAAAGACTCCATCCAGAAGTCCCTACACAT...AAACAAGGTATTCTTCAACTTCAAAACTCTCTTAGCTCTTGTGTTCCTAACCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234023.2 |
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| CDS-3UTR TCA 90 bp | AAGGTTAGGAACACAAGAGCTAAGAGAGTTTTGAAGTTGAAGAATACCTTGTTTAGCCCTTCTTTTGCTTaGGCTTTTCCAAGTACATGT | + |
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Preference number: 4 (lower is better) Translates to: KVRNTRAKRVLKLKNTLFSPSFA*AFPSTC Trigger: ACATGTACTTGGAAAAGCTCAAGCAAAAGAAGGGCT...AAACAAGGTATTCTTCAACTTCAAAACTCTCTTAGCTCTTGTGTTCCTAACCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000234023.2 |
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| CDS TCA 90 bp | ACTCCCACCTTGAGGGCCTCTGCTGGTGAGAAAAGGGTCCCCAGCTaGAGGGCACGCTCCGCCTCCCGGTGCCCGATGGTGTTCACATAC | + |
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Preference number: 5 (lower is better) Translates to: TPTLRASAGEKRVPS*RARSASRCPMVFTY Trigger: GTATGTGAACACCATCGGGCACCGGGAGGCGGAGCGTGCCCTTCAGCTGGGGACCCTTTTCTCACCAGCAGAGGCCCTCAAGGTGGGAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024946.7 ENSMUST00000234023.2 ENSMUST00000234304.2 |
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| CDS TCA 90 bp | GTGGGCTGGGTTCCGGCCATACATCTCCAGCAAGTCCAGGCCAGCTaGGAAGATACCCGGGCATTCCGACGTGAGGATGACACCTCGGAT | + |
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Preference number: 5 (lower is better) Translates to: VGWVPAIHLQQVQAS*EDTRAFRREDDTSD Trigger: ATCCGAGGTGTCATCCTCACGTCGGAATGCCCGGGTATCTTCTCAGCTGGCCTGGACTTGCTGGAGATGTATGGCCGGAACCCAGCCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024946.7 ENSMUST00000234023.2 ENSMUST00000234150.2 ENSMUST00000234304.2 |
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| CDS TCA 90 bp | ATAGCTAACCACTTGGTCATCACTGAGCGAGCCTTGCTGTGTACCTaGTCCTCAGGTACCACCTCATCCACCACTCCCACCTTGAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: IANHLVITERALLCT*SSGTTSSTTPTLRA Trigger: GGCCCTCAAGGTGGGAGTGGTGGATGAGGTGGTACCTGAGGATCAGGTACACAGCAAGGCTCGCTCAGTGATGACCAAGTGGTTAGCTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024946.7 ENSMUST00000234023.2 ENSMUST00000234304.2 |
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| CDS CCA 90 bp | TCTGCGGTGGCCTTTCGCATCATGTTCTTTGTCAGCTGCCGAGAATaGTCTGGGATAGCTAACCACTTGGTCATCACTGAGCGAGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: SAVAFRIMFFVSCRE*SGIANHLVITERAL Trigger: CAAGGCTCGCTCAGTGATGACCAAGTGGTTAGCTATCCCAGACCATTCTCGGCAGCTGACAAAGAACATGATGCGAAAGGCCACCGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024946.7 ENSMUST00000234023.2 ENSMUST00000234304.2 |
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| CDS GCA 90 bp | GGTGAAATTCTGGATGTCAGCCTCTCGCTGCTTGATCAGGTTGTCTaGGGTGGCCTTTCGCATCATGTTCTTTGTCAGCTGCCGAGAATG | + |
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Preference number: 5 (lower is better) Translates to: GEILDVSLSLLDQVV*GGLSHHVLCQLPRM Trigger: CATTCTCGGCAGCTGACAAAGAACATGATGCGAAAGGCCACCGCAGACAACCTGATCAAGCAGCGAGAGGCTGACATCCAGAATTTCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024946.7 ENSMUST00000234023.2 ENSMUST00000234304.2 |
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| CDS GCA 90 bp | ATCAGGTTGTCTGCGGTGGCCTTTCGCATCATGTTCTTTGTCAGCTaGCGAGAATGGTCTGGGATAGCTAACCACTTGGTCATCACTGAG | + |
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Preference number: 5 (lower is better) Translates to: IRLSAVAFRIMFFVS*REWSGIANHLVITE Trigger: CTCAGTGATGACCAAGTGGTTAGCTATCCCAGACCATTCTCGGCAGCTGACAAAGAACATGATGCGAAAGGCCACCGCAGACAACCTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024946.7 ENSMUST00000234023.2 ENSMUST00000234304.2 |
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| CDS GCA 90 bp | TCTTTGGAGATGAAACTGGTGAAATTCTGGATGTCAGCCTCTCGCTaGTTGATCAGGTTGTCTGCGGTGGCCTTTCGCATCATGTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: SLEMKLVKFWMSASR*LIRLSAVAFRIMFF Trigger: AAAGAACATGATGCGAAAGGCCACCGCAGACAACCTGATCAAGCAGCGAGAGGCTGACATCCAGAATTTCACCAGTTTCATCTCCAAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024946.7 ENSMUST00000234023.2 ENSMUST00000234304.2 |
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| CDS CCA 90 bp | CCCTTCTTTTGCTTGAGCTTTTCCAAGTACATGTGTAGGGACTTCTaGATGGAGTCTTTGGAGATGAAACTGGTGAAATTCTGGATGTCA | + |
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Preference number: 5 (lower is better) Translates to: PFFCLSFSKYMCRDF*MESLEMKLVKFWMS Trigger: TGACATCCAGAATTTCACCAGTTTCATCTCCAAAGACTCCATCCAGAAGTCCCTACACATGTACTTGGAAAAGCTCAAGCAAAAGAAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024946.7 ENSMUST00000234023.2 ENSMUST00000234304.2 |
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| CDS-3UTR CAA 90 bp | AAGGTTAGGAACACAAGAGCTAAGAGAGTTTTGAAGTTGAAGAATACCTTGTTTGCTGGAGAGGCTCCATaGATGGCAGACACTAAGATC | + |
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Preference number: 5 (lower is better) Translates to: KVRNTRAKRVLKLKNTLFAGEAP*MADTKI Trigger: GATCTTAGTGTCTGCCATCAATGGAGCCTCTCCAGC...AAACAAGGTATTCTTCAACTTCAAAACTCTCTTAGCTCTTGTGTTCCTAACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234023.2 |
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| CDS-3UTR CAA 90 bp | AAGGTTAGGAACACAAGAGCTAAGAGAGTTTTGAAGTTGAAGAATACCTTGTTTACACCTCGGATGCTCTaGTCATTTTCCAGCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: KVRNTRAKRVLKLKNTLFTPRML*SFSSFS Trigger: GGAGAAGCTGGAAAATGACAAGAGCATCCGAGGTGT...AAACAAGGTATTCTTCAACTTCAAAACTCTCTTAGCTCTTGTGTTCCTAACCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234023.2 |
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| CDS-3UTR CAA 90 bp | AAGGTTAGGAACACAAGAGCTAAGAGAGTTTTGAAGTTGAAGAATACCTTGTTTAATCCTATAGTATATTaGGGGTTGTCAGCCATAACC | + |
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Preference number: 5 (lower is better) Translates to: KVRNTRAKRVLKLKNTLFNPIVY*GLSAIT Trigger: GGTTATGGCTGACAACCCCAAATATACTATAGGATT...AAACAAGGTATTCTTCAACTTCAAAACTCTCTTAGCTCTTGTGTTCCTAACCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234023.2 |
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| CDS TCA 72 bp | TTGAGGGCCTCTGCTGGTGAGAAAAGGGTCCCCAGCTaGAGGGCACGCTCCGCCTCCCGGTGCCCGATGGTG | + |
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Preference number: 6 (lower is better) Translates to: LRASAGEKRVPS*RARSASRCPMV Trigger: CACCATCGGGCACCGGGAGGCGGAGCGTGCCCTTCAGCTGGGGACCCTTTTCTCACCAGCAGAGGCCCTCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024946.7 ENSMUST00000234023.2 ENSMUST00000234304.2 |
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| CDS TCA 72 bp | CTCATCCACCACTCCCACCTTGAGGGCCTCTGCTGGTaGGAAAAGGGTCCCCAGCTGAAGGGCACGCTCCGC | + |
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Preference number: 6 (lower is better) Translates to: LIHHSHLEGLCW*EKGPQLKGTLR Trigger: GCGGAGCGTGCCCTTCAGCTGGGGACCCTTTTCTCACCAGCAGAGGCCCTCAAGGTGGGAGTGGTGGATGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024946.7 ENSMUST00000234023.2 ENSMUST00000234304.2 |
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| CDS TCA 72 bp | GTTCCGGCCATACATCTCCAGCAAGTCCAGGCCAGCTaGGAAGATACCCGGGCATTCCGACGTGAGGATGAC | + |
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Preference number: 6 (lower is better) Translates to: VPAIHLQQVQAS*EDTRAFRREDD Trigger: GTCATCCTCACGTCGGAATGCCCGGGTATCTTCTCAGCTGGCCTGGACTTGCTGGAGATGTATGGCCGGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024946.7 ENSMUST00000234023.2 ENSMUST00000234150.2 ENSMUST00000234304.2 |
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| CDS TCA 72 bp | CACTTGGTCATCACTGAGCGAGCCTTGCTGTGTACCTaGTCCTCAGGTACCACCTCATCCACCACTCCCACC | + |
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Preference number: 6 (lower is better) Translates to: HLVITERALLCT*SSGTTSSTTPT Trigger: GGTGGGAGTGGTGGATGAGGTGGTACCTGAGGATCAGGTACACAGCAAGGCTCGCTCAGTGATGACCAAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024946.7 ENSMUST00000234023.2 ENSMUST00000234304.2 |
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| CDS CAA 72 bp | GGGCATTCCGACGTGAGGATGACACCTCGGATGCTCTaGTCATTTTCCAGCTTCTCCAGGCTGATGGTGAAC | + |
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Preference number: 6 (lower is better) Translates to: GHSDVRMTPRML*SFSSFSRLMVN Trigger: GTTCACCATCAGCCTGGAGAAGCTGGAAAATGACAAGAGCATCCGAGGTGTCATCCTCACGTCGGAATGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024946.7 ENSMUST00000234023.2 ENSMUST00000234150.2 ENSMUST00000234304.2 |
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| CDS GCA 72 bp | TCTGCGGTGGCCTTTCGCATCATGTTCTTTGTCAGCTaGCGAGAATGGTCTGGGATAGCTAACCACTTGGTC | + |
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Preference number: 6 (lower is better) Translates to: SAVAFRIMFFVS*REWSGIANHLV Trigger: GACCAAGTGGTTAGCTATCCCAGACCATTCTCGGCAGCTGACAAAGAACATGATGCGAAAGGCCACCGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024946.7 ENSMUST00000234023.2 ENSMUST00000234304.2 |
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| CDS CAA 90 bp | AAGATACCCGGGCATTCCGACGTGAGGATGACACCTCGGATGCTCTaGTCATTTTCCAGCTTCTCCAGGCTGATGGTGAACTCTGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: KIPGHSDVRMTPRML*SFSSFSRLMVNSVR Trigger: TCTCACAGAGTTCACCATCAGCCTGGAGAAGCTGGAAAATGACAAGAGCATCCGAGGTGTCATCCTCACGTCGGAATGCCCGGGTATCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024946.7 ENSMUST00000234023.2 ENSMUST00000234150.2 ENSMUST00000234304.2 |
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| CDS CAA 90 bp | AAACTGGTGAAATTCTGGATGTCAGCCTCTCGCTGCTTGATCAGGTaGTCTGCGGTGGCCTTTCGCATCATGTTCTTTGTCAGCTGCCGA | + |
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Preference number: 6 (lower is better) Translates to: KLVKFWMSASRCLIR*SAVAFRIMFFVSCR Trigger: TCGGCAGCTGACAAAGAACATGATGCGAAAGGCCACCGCAGACAACCTGATCAAGCAGCGAGAGGCTGACATCCAGAATTTCACCAGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024946.7 ENSMUST00000234023.2 ENSMUST00000234304.2 |
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| CDS GCA 72 bp | ATGAAACTGGTGAAATTCTGGATGTCAGCCTCTCGCTaGTTGATCAGGTTGTCTGCGGTGGCCTTTCGCATC | + |
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Preference number: 6 (lower is better) Translates to: MKLVKFWMSASR*LIRLSAVAFRI Trigger: GATGCGAAAGGCCACCGCAGACAACCTGATCAAGCAGCGAGAGGCTGACATCCAGAATTTCACCAGTTTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024946.7 ENSMUST00000234023.2 ENSMUST00000234304.2 |
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| CDS CAA 72 bp | AAACTGGTGAAATTCTGGATGTCAGCCTCTCGCTGCTaGATCAGGTTGTCTGCGGTGGCCTTTCGCATCATG | + |
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Preference number: 6 (lower is better) Translates to: KLVKFWMSASRC*IRLSAVAFRIM Trigger: CATGATGCGAAAGGCCACCGCAGACAACCTGATCAAGCAGCGAGAGGCTGACATCCAGAATTTCACCAGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024946.7 ENSMUST00000234023.2 ENSMUST00000234304.2 |
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| CDS CCA 72 bp | GCCTTTCGCATCATGTTCTTTGTCAGCTGCCGAGAATaGTCTGGGATAGCTAACCACTTGGTCATCACTGAG | + |
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Preference number: 6 (lower is better) Translates to: AFRIMFFVSCRE*SGIANHLVITE Trigger: CTCAGTGATGACCAAGTGGTTAGCTATCCCAGACCATTCTCGGCAGCTGACAAAGAACATGATGCGAAAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024946.7 ENSMUST00000234023.2 ENSMUST00000234304.2 |
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| CDS CAA 72 bp | AAATTCTGGATGTCAGCCTCTCGCTGCTTGATCAGGTaGTCTGCGGTGGCCTTTCGCATCATGTTCTTTGTC | + |
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Preference number: 6 (lower is better) Translates to: KFWMSASRCLIR*SAVAFRIMFFV Trigger: GACAAAGAACATGATGCGAAAGGCCACCGCAGACAACCTGATCAAGCAGCGAGAGGCTGACATCCAGAATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024946.7 ENSMUST00000234023.2 ENSMUST00000234304.2 |
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| CDS CAA 90 bp | TTGGAGATGAAACTGGTGAAATTCTGGATGTCAGCCTCTCGCTGCTaGATCAGGTTGTCTGCGGTGGCCTTTCGCATCATGTTCTTTGTC | + |
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Preference number: 6 (lower is better) Translates to: LEMKLVKFWMSASRC*IRLSAVAFRIMFFV Trigger: GACAAAGAACATGATGCGAAAGGCCACCGCAGACAACCTGATCAAGCAGCGAGAGGCTGACATCCAGAATTTCACCAGTTTCATCTCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024946.7 ENSMUST00000234023.2 ENSMUST00000234304.2 |
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| CDS CAA 90 bp | TTGAGCTTTTCCAAGTACATGTGTAGGGACTTCTGGATGGAGTCTTaGGAGATGAAACTGGTGAAATTCTGGATGTCAGCCTCTCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: LSFSKYMCRDFWMES*EMKLVKFWMSASRC Trigger: GCAGCGAGAGGCTGACATCCAGAATTTCACCAGTTTCATCTCCAAAGACTCCATCCAGAAGTCCCTACACATGTACTTGGAAAAGCTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024946.7 ENSMUST00000234023.2 ENSMUST00000234304.2 |
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| CDS CAA 72 bp | TCCAAGTACATGTGTAGGGACTTCTGGATGGAGTCTTaGGAGATGAAACTGGTGAAATTCTGGATGTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: SKYMCRDFWMES*EMKLVKFWMSA Trigger: GGCTGACATCCAGAATTTCACCAGTTTCATCTCCAAAGACTCCATCCAGAAGTCCCTACACATGTACTTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024946.7 ENSMUST00000234023.2 ENSMUST00000234304.2 |
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| CDS CCA 72 bp | TGCTTGAGCTTTTCCAAGTACATGTGTAGGGACTTCTaGATGGAGTCTTTGGAGATGAAACTGGTGAAATTC | + |
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Preference number: 6 (lower is better) Translates to: CLSFSKYMCRDF*MESLEMKLVKF Trigger: GAATTTCACCAGTTTCATCTCCAAAGACTCCATCCAGAAGTCCCTACACATGTACTTGGAAAAGCTCAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024946.7 ENSMUST00000234023.2 ENSMUST00000234304.2 |
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