Pregenerated sensors for ECHS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025465Ensembl transcript IDs: ENSMUST00000026538.13
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCTTTAATCCCAACACTTGGAAAACAGAGACTGGCTGGTCTCTGTaGGTTCAAGGTCAACCTGGTCTATATAGTAACTTCCAGGCAGCC | + |
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Preference number: 1 (lower is better) Translates to: TFNPNTWKTETGWSL*VQGQPGLYSNFQAA Trigger: GGCTGCCTGGAAGTTACTATATAGACCAGGTTGACCTTGAACTCACAGAGACCAGCCAGTCTCTGTTTTCCAAGTGTTGGGATTAAAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| 3UTR CCA 90 bp | TCGAAACTAAACTGTGAAGTAGTTACTTTCATTGAATTCTTGAGTTaGGAATCAGCAGAGAGGGCCACTTCCCTCTTGAAGCTCACATCT | + |
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Preference number: 1 (lower is better) Translates to: SKLNCEVVTFIEFLS*ESAERATSLLKLTS Trigger: AGATGTGAGCTTCAAGAGGGAAGTGGCCCTCTCTGCTGATTCCCAACTCAAGAATTCAATGAAAGTAACTACTTCACAGTTTAGTTTCGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| 3UTR-3UTR TCA 90 bp | ATGAGCTGCGGAGAATGCACAGGGGAGTGGCTGGCCCAAGCGTGCACCTGCCCTACTTCCAACAACTGGTaGAGGCTGCAGGCCACGCCA | + |
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Preference number: 2 (lower is better) Translates to: MSCGECTGEWLAQACTCPTSNNW*RLQATP Trigger: TGGCGTGGCCTGCAGCCTTCACCAGTTGTTGGAAGT...AGGGCAGGTGCACGCTTGGGCCAGCCACTCCCCTGTGCATTCTCCGCAGCTCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| 3UTR-3UTR TCA 90 bp | GGAGAATGCACAGGGGAGTGGCTGGCCCAAGCGTGCACCTGCCCTTACAGTGAATCTCAAAGGACAGGCTaGGCTTTCCAGGGTGGCAAA | + |
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Preference number: 2 (lower is better) Translates to: GECTGEWLAQACTCPYSESQRTG*AFQGGK Trigger: TTTGCCACCCTGGAAAGCTCAGCCTGTCCTTTGAGA...TTCACTGTAAGGGCAGGTGCACGCTTGGGCCAGCCACTCCCCTGTGCATTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| 3UTR CAA 90 bp | TTGGGAATCAGCAGAGAGGGCCACTTCCCTCTTGAAGCTCACATCTaGAGCTATGAGCTGCGGAGAATGCACAGGGGAGTGGCTGGCCCA | + |
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Preference number: 2 (lower is better) Translates to: LGISREGHFPLEAHI*SYELRRMHRGVAGP Trigger: TGGGCCAGCCACTCCCCTGTGCATTCTCCGCAGCTCATAGCTCAAGATGTGAGCTTCAAGAGGGAAGTGGCCCTCTCTGCTGATTCCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| 3UTR CAA 90 bp | CGGTGGGAACTGTGGCCGACACTACTACCCTTTTGGATCATTTATTaGCCTCTCAAAGGACAGGCTGAGCTTTCCAGGGTGGCAAACGGT | + |
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Preference number: 2 (lower is better) Translates to: RWELWPTLLPFWIIY*PLKGQAELSRVANG Trigger: ACCGTTTGCCACCCTGGAAAGCTCAGCCTGTCCTTTGAGAGGCAAATAAATGATCCAAAAGGGTAGTAGTGTCGGCCACAGTTCCCACCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| 3UTR-3UTR GCA 90 bp | CTTCCAACAACTGGTGAAGGCTGCAGGCCACGCCATGAGTACCCAAGCTGTGGCTTTGGATCATTTATTTaGCTCTCAAAGGACAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: LPTTGEGCRPRHEYPSCGFGSFI*LSKDRL Trigger: CAGCCTGTCCTTTGAGAGGCAAATAAATGATCCAAA...GCCACAGCTTGGGTACTCATGGCGTGGCCTGCAGCCTTCACCAGTTGTTGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| 3UTR-3UTR CCA 90 bp | ATAGTAACTTCCAGGCAGCCAGGGATACACAGTGAAACCTTAGCCATAAGAAAAGAATGCACAGGGGAGTaGCTGGCCCAAGCGTGCACC | + |
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Preference number: 2 (lower is better) Translates to: IVTSRQPGIHSETLAIRKECTGE*LAQACT Trigger: GGTGCACGCTTGGGCCAGCCACTCCCCTGTGCATTC...TTTTCTTATGGCTAAGGTTTCACTGTGTATCCCTGGCTGCCTGGAAGTTACTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| 3UTR-3UTR GCA 90 bp | AAAAACCACATTGGCTCTCTAGAGACAACTACAGGTGAGTCGAAACTAAACTGTACAACTGGTGAAGGCTaGAGGCCACGCCATGAGTAC | + |
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Preference number: 2 (lower is better) Translates to: KNHIGSLETTTGESKLNCTTGEG*RPRHEY Trigger: GTACTCATGGCGTGGCCTGCAGCCTTCACCAGTTGT...ACAGTTTAGTTTCGACTCACCTGTAGTTGTCTCTAGAGAGCCAATGTGGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| 3UTR CAA 90 bp | GGTGAGTCGAAACTAAACTGTGAAGTAGTTACTTTCATTGAATTCTaGAGTTGGGAATCAGCAGAGAGGGCCACTTCCCTCTTGAAGCTC | + |
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Preference number: 2 (lower is better) Translates to: GESKLNCEVVTFIEF*SWESAERATSLLKL Trigger: GAGCTTCAAGAGGGAAGTGGCCCTCTCTGCTGATTCCCAACTCAAGAATTCAATGAAAGTAACTACTTCACAGTTTAGTTTCGACTCACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| 3UTR-3UTR CAA 90 bp | CGCCATGAGTACCCAAGCTGTGGCCACAGCCCTGAAGCCTTCGGTGGGAACTGTTTTTGGATCATTTATTaGCCTCTCAAAGGACAGGCT | + |
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Preference number: 3 (lower is better) Translates to: RHEYPSCGHSPEAFGGNCFWIIY*PLKGQA Trigger: AGCCTGTCCTTTGAGAGGCAAATAAATGATCCAAAA...ACAGTTCCCACCGAAGGCTTCAGGGCTGTGGCCACAGCTTGGGTACTCATGGCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| 3UTR CCA 72 bp | CTTCGGTGGGAACTGTGGCCGACACTACTACCCTTTTaGATCATTTATTTGCCTCTCAAAGGACAGGCTGAG | + |
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Preference number: 3 (lower is better) Translates to: LRWELWPTLLPF*IIYLPLKGQAE Trigger: CTCAGCCTGTCCTTTGAGAGGCAAATAAATGATCCAAAAGGGTAGTAGTGTCGGCCACAGTTCCCACCGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| 3UTR TCA 72 bp | CTTTTGGATCATTTATTTGCCTCTCAAAGGACAGGCTaGGCTTTCCAGGGTGGCAAACGGTATAGCTGCCAG | + |
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Preference number: 3 (lower is better) Translates to: LLDHLFASQRTG*AFQGGKRYSCQ Trigger: CTGGCAGCTATACCGTTTGCCACCCTGGAAAGCTCAGCCTGTCCTTTGAGAGGCAAATAAATGATCCAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| 3UTR CCA 72 bp | AACTGTGAAGTAGTTACTTTCATTGAATTCTTGAGTTaGGAATCAGCAGAGAGGGCCACTTCCCTCTTGAAG | + |
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Preference number: 3 (lower is better) Translates to: NCEVVTFIEFLS*ESAERATSLLK Trigger: CTTCAAGAGGGAAGTGGCCCTCTCTGCTGATTCCCAACTCAAGAATTCAATGAAAGTAACTACTTCACAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| 3UTR TCA 72 bp | CTATATAGTAACTTCCAGGCAGCCAGGGATACACAGTaGAACCTTAGCCATAAGAAAATAGCAATAATAATT | + |
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Preference number: 3 (lower is better) Translates to: LYSNFQAARDTQ*NLSHKKIAIII Trigger: AATTATTATTGCTATTTTCTTATGGCTAAGGTTTCACTGTGTATCCCTGGCTGCCTGGAAGTTACTATATAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS-3UTR CCA 90 bp | ATGAGTACCCAAGCTGTGGCCACAGCCCTGAAGCCTTCGGTGGGAACTGTGGCCCTCCAGCACCTGGGATaGTCCCCAGGAGGATTTCTG | + |
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Preference number: 4 (lower is better) Translates to: MSTQAVATALKPSVGTVALQHLG*SPGGFL Trigger: CAGAAATCCTCCTGGGGACCATCCCAGGTGCTGGAG...GGCCACAGTTCCCACCGAAGGCTTCAGGGCTGTGGCCACAGCTTGGGTACTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS-3UTR CCA 90 bp | CTTCCAACAACTGGTGAAGGCTGCAGGCCACGCCATGAGTACCCAAGCTGTGGCAGTGCCTCCAGCACCTaGGATGGTCCCCAGGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: LPTTGEGCRPRHEYPSCGSASST*DGPQED Trigger: ATCCTCCTGGGGACCATCCCAGGTGCTGGAGGCACT...GCCACAGCTTGGGTACTCATGGCGTGGCCTGCAGCCTTCACCAGTTGTTGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS-3UTR TCA 90 bp | GGAGAATGCACAGGGGAGTGGCTGGCCCAAGCGTGCACCTGCCCTTACAGTGAAAGATGCGGTCACCAGTaGGGACCATCTCCATTGCTA | + |
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Preference number: 4 (lower is better) Translates to: GECTGEWLAQACTCPYSERCGHQ*GPSPLL Trigger: TAGCAATGGAGATGGTCCTCACTGGTGACCGCATCT...TTCACTGTAAGGGCAGGTGCACGCTTGGGCCAGCCACTCCCCTGTGCATTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS-3UTR CCA 90 bp | CTTCCAACAACTGGTGAAGGCTGCAGGCCACGCCATGAGTACCCAAGCTGTGGCGTGATGTGGTCCCAGTaGCTCAGGAACTTGCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: LPTTGEGCRPRHEYPSCGVMWSQ*LRNLLE Trigger: CTCCAGCAAGTTCCTGAGCCACTGGGACCACATCAC...GCCACAGCTTGGGTACTCATGGCGTGGCCTGCAGCCTTCACCAGTTGTTGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| 3UTR CAA 72 bp | AGCAGAGAGGGCCACTTCCCTCTTGAAGCTCACATCTaGAGCTATGAGCTGCGGAGAATGCACAGGGGAGTG | + |
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Preference number: 4 (lower is better) Translates to: SREGHFPLEAHI*SYELRRMHRGV Trigger: CACTCCCCTGTGCATTCTCCGCAGCTCATAGCTCAAGATGTGAGCTTCAAGAGGGAAGTGGCCCTCTCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS-3UTR TCA 90 bp | AGACGGGGTGAGCCTGACTTCCAACAACTGGTGAAGGCTGCAGGCCACGCCATGTCTCGCCAGCATAGATaGTATCACACATCATGGCAA | + |
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Preference number: 4 (lower is better) Translates to: RRGEPDFQQLVKAAGHAMSRQHR*YHTSWQ Trigger: TTGCCATGATGTGTGATATCATCTATGCTGGCGAGA...CATGGCGTGGCCTGCAGCCTTCACCAGTTGTTGGAAGTCAGGCTCACCCCGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS-3UTR GCA 90 bp | AGACGGGGTGAGCCTGACTTCCAACAACTGGTGAAGGCTGCAGGCCACGCCATGATAACCATTGACAGCTaGGATGACCGGTTTCTTGAC | + |
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Preference number: 4 (lower is better) Translates to: RRGEPDFQQLVKAAGHAMITIDS*DDRFLD Trigger: GTCAAGAAACCGGTCATCGCAGCTGTCAATGGTTAT...CATGGCGTGGCCTGCAGCCTTCACCAGTTGTTGGAAGTCAGGCTCACCCCGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS-3UTR GCA 90 bp | GCTTCCCAGGTTTCTGATTCAGAAGACGGGGTGAGCCTGACTTCCAACAACTGGCAGGCCATTGCAAAGTaGATTGAGTGCTTTGGGGCG | + |
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Preference number: 4 (lower is better) Translates to: ASQVSDSEDGVSLTSNNWQAIAK*IECFGA Trigger: CGCCCCAAAGCACTCAATGCACTTTGCAATGGCCTG...CCAGTTGTTGGAAGTCAGGCTCACCCCGTCTTCTGAATCAGAAACCTGGGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS-3UTR CCA 90 bp | ATAGTAACTTCCAGGCAGCCAGGGATACACAGTGAAACCTTAGCCATAAGAAAAGTGAGCTACAGGCTCTaGGCAGCAGAGCACGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: IVTSRQPGIHSETLAIRKVSYRL*AAEHAG Trigger: CCCTGCGTGCTCTGCTGCCCAGAGCCTGTAGCTCAC...TTTTCTTATGGCTAAGGTTTCACTGTGTATCCCTGGCTGCCTGGAAGTTACTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS-3UTR TCA 90 bp | CGACACTACTACCCTTTTGGATCATTTATTTGCCTCTCAAAGGACAGGCTGAGCCTTTGCATCCTGAGCTaGGATGCGGTCACCAGTGAG | + |
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Preference number: 4 (lower is better) Translates to: RHYYPFGSFICLSKDRLSLCILS*DAVTSE Trigger: CTCACTGGTGACCGCATCTCAGCTCAGGATGCAAAG...GCTCAGCCTGTCCTTTGAGAGGCAAATAAATGATCCAAAAGGGTAGTAGTGTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS-3UTR CCA 90 bp | CTTCCAACAACTGGTGAAGGCTGCAGGCCACGCCATGAGTACCCAAGCTGTGGCTTTCTGCACATTGGATaGCTTCTTCAACCAGTTTTT | + |
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Preference number: 4 (lower is better) Translates to: LPTTGEGCRPRHEYPSCGFLHIG*LLQPVF Trigger: AAAAACTGGTTGAAGAAGCCATCCAATGTGCAGAAA...GCCACAGCTTGGGTACTCATGGCGTGGCCTGCAGCCTTCACCAGTTGTTGGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| 3UTR CAA 72 bp | CTGTGGCCGACACTACTACCCTTTTGGATCATTTATTaGCCTCTCAAAGGACAGGCTGAGCTTTCCAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: LWPTLLPFWIIY*PLKGQAELSRV Trigger: CACCCTGGAAAGCTCAGCCTGTCCTTTGAGAGGCAAATAAATGATCCAAAAGGGTAGTAGTGTCGGCCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS-3UTR CCA 90 bp | ATAGTAACTTCCAGGCAGCCAGGGATACACAGTGAAACCTTAGCCATAAGAAAATTGGGGCGGTTCAACTaGATCAGCCCCACGCTGCTA | + |
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Preference number: 4 (lower is better) Translates to: IVTSRQPGIHSETLAIRKLGRFN*ISPTLL Trigger: TAGCAGCGTGGGGCTGATCCAGTTGAACCGCCCCAA...TTTTCTTATGGCTAAGGTTTCACTGTGTATCCCTGGCTGCCTGGAAGTTACTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS-3UTR CCA 90 bp | AAAAACCACATTGGCTCTCTAGAGACAACTACAGGTGAGTCGAAACTAAACTGTTTGACCCGGGTGATGTaGTCCCAGTGGCTCAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: KNHIGSLETTTGESKLNCLTRVM*SQWLRN Trigger: GTTCCTGAGCCACTGGGACCACATCACCCGGGTCAA...ACAGTTTAGTTTCGACTCACCTGTAGTTGTCTCTAGAGAGCCAATGTGGTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS-3UTR TCA 90 bp | GTAGTTACTTTCATTGAATTCTTGAGTTGGGAATCAGCAGAGAGGGCCACTTCCGGTTCTGCATTTCCTTaGTGTCAGCTCCAGCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: VVTFIEFLSWESAERATSGSAFP*CQLQLQ Trigger: TTGCAGCTGGAGCTGACATCAAGGAAATGCAGAACC...GGAAGTGGCCCTCTCTGCTGATTCCCAACTCAAGAATTCAATGAAAGTAACTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS-3UTR TCA 90 bp | AAAAACCACATTGGCTCTCTAGAGACAACTACAGGTGAGTCGAAACTAAACTGTTCTCCAGTGCTTGGTTaGGCTCCTCAATCAGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: KNHIGSLETTTGESKLNCSPVLG*APQSGH Trigger: ATGGCCTGATTGAGGAGCTCAACCAAGCACTGGAGA...ACAGTTTAGTTTCGACTCACCTGTAGTTGTCTCTAGAGAGCCAATGTGGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS-3UTR TCA 90 bp | AAAAACCACATTGGCTCTCTAGAGACAACTACAGGTGAGTCGAAACTAAACTGTTCTGTGATGATGTACTaGAAGTTAGCACCCGAGGCG | + |
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Preference number: 4 (lower is better) Translates to: KNHIGSLETTTGESKLNCSVMMY*KLAPEA Trigger: CGCCTCGGGTGCTAACTTTCAGTACATCATCACAGA...ACAGTTTAGTTTCGACTCACCTGTAGTTGTCTCTAGAGAGCCAATGTGGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS-3UTR GCA 90 bp | AAAAACCACATTGGCTCTCTAGAGACAACTACAGGTGAGTCGAAACTAAACTGTGCAAAGTGCATTGAGTaGTTTGGGGCGGTTCAACTG | + |
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Preference number: 4 (lower is better) Translates to: KNHIGSLETTTGESKLNCAKCIE*FGAVQL Trigger: CAGTTGAACCGCCCCAAAGCACTCAATGCACTTTGC...ACAGTTTAGTTTCGACTCACCTGTAGTTGTCTCTAGAGAGCCAATGTGGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS-3UTR GCA 90 bp | ATAGTAACTTCCAGGCAGCCAGGGATACACAGTGAAACCTTAGCCATAAGAAAAAGTGGCTCAGGAACTTaGTGGAGTAACAGTCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: IVTSRQPGIHSETLAIRKSGSGT*WSNSPE Trigger: TTCAGGACTGTTACTCCAGCAAGTTCCTGAGCCACT...TTTTCTTATGGCTAAGGTTTCACTGTGTATCCCTGGCTGCCTGGAAGTTACTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS-3UTR GCA 90 bp | GTAGTTACTTTCATTGAATTCTTGAGTTGGGAATCAGCAGAGAGGGCCACTTCCCGTCATCTCAAAGGCTaGATTCACAGATTCTTTCGC | + |
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Preference number: 4 (lower is better) Translates to: VVTFIEFLSWESAERATSRHLKG*IHRFFR Trigger: GCGAAAGAATCTGTGAATGCAGCCTTTGAGATGACG...GGAAGTGGCCCTCTCTGCTGATTCCCAACTCAAGAATTCAATGAAAGTAACTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS-3UTR TCA 90 bp | TCTCTAGAGACAACTACAGGTGAGTCGAAACTAAACTGTGAAGTAGTTACTTTCCATTGCAAAGTGCATTaGGTGCTTTGGGGCGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: SLETTTGESKLNCEVVTFHCKVH*VLWGGS Trigger: TGAACCGCCCCAAAGCACTCAATGCACTTTGCAATG...GAAAGTAACTACTTCACAGTTTAGTTTCGACTCACCTGTAGTTGTCTCTAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS-3UTR GCA 90 bp | AAAAACCACATTGGCTCTCTAGAGACAACTACAGGTGAGTCGAAACTAAACTGTGGATCAGCCCCACGCTaGTATTCTTTCCTTTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: KNHIGSLETTTGESKLNCGSAPR*YSFLSF Trigger: AAAAGAAAGGAAAGAATAGCAGCGTGGGGCTGATCC...ACAGTTTAGTTTCGACTCACCTGTAGTTGTCTCTAGAGAGCCAATGTGGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS-3UTR GCA 90 bp | AAAAACCACATTGGCTCTCTAGAGACAACTACAGGTGAGTCGAAACTAAACTGTCCTTTTCTCTACAAATaGAGTCATCCCTTCTCTCCG | + |
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Preference number: 4 (lower is better) Translates to: KNHIGSLETTTGESKLNCPFLYK*SHPFSP Trigger: CGGAGAGAAGGGATGACTGCATTTGTAGAGAAAAGG...ACAGTTTAGTTTCGACTCACCTGTAGTTGTCTCTAGAGAGCCAATGTGGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS CCA 90 bp | CGATTTGCCGACTGCTCGGGTGAGTCTCTGAGTGCCTCCAGCACCTaGGATGGTCCCCAGGAGGATTTCTGGCTGTCCGAACTGGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: RFADCSGESLSASST*DGPQEDFWLSELGF Trigger: AAAGCCCAGTTCGGACAGCCAGAAATCCTCCTGGGGACCATCCCAGGTGCTGGAGGCACTCAGAGACTCACCCGAGCAGTCGGCAAATCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS-3UTR CAA 90 bp | ATGAGCTGCGGAGAATGCACAGGGGAGTGGCTGGCCCAAGCGTGCACCTGCCCTTCCTCAATCAGGCCATaGCAAAGTGCATTGAGTGCT | + |
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Preference number: 5 (lower is better) Translates to: MSCGECTGEWLAQACTCPSSIRP*QSALSA Trigger: AGCACTCAATGCACTTTGCAATGGCCTGATTGAGGA...AGGGCAGGTGCACGCTTGGGCCAGCCACTCCCCTGTGCATTCTCCGCAGCTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS-3UTR CAA 90 bp | CTTCCAACAACTGGTGAAGGCTGCAGGCCACGCCATGAGTACCCAAGCTGTGGCCAAGACCTGCCTGCTTaGCATCCTGAGCTGAGATGC | + |
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Preference number: 5 (lower is better) Translates to: LPTTGEGCRPRHEYPSCGQDLPA*HPELRC Trigger: GCATCTCAGCTCAGGATGCAAAGCAGGCAGGTCTTG...GCCACAGCTTGGGTACTCATGGCGTGGCCTGCAGCCTTCACCAGTTGTTGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS GCA 90 bp | GGTCTCCAGTGCTTGGTTGAGCTCCTCAATCAGGCCATTGCAAAGTaGATTGAGTGCTTTGGGGCGGTTCAACTGGATCAGCCCCACGCT | + |
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Preference number: 5 (lower is better) Translates to: GLQCLVELLNQAIAK*IECFGAVQLDQPHA Trigger: AGCGTGGGGCTGATCCAGTTGAACCGCCCCAAAGCACTCAATGCACTTTGCAATGGCCTGATTGAGGAGCTCAACCAAGCACTGGAGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS GCA 90 bp | GCCTTATCCCCACCAGTGAGCACAATGGCACCCACAGCAGGATCTTaGTCAAAGGTCTCCAGTGCTTGGTTGAGCTCCTCAATCAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: ALSPPVSTMAPTAGS*SKVSSAWLSSSIRP Trigger: TGGCCTGATTGAGGAGCTCAACCAAGCACTGGAGACCTTTGAGCAAGATCCTGCTGTGGGTGCCATTGTGCTCACTGGTGGGGATAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS GCA 90 bp | CATGGCAAGTTCACAACCCCCACCAAGAGCATAACCATTGACAGCTaGGATGACCGGTTTCTTGACCCGGGTGATGTGGTCCCAGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: HGKFTTPTKSITIDS*DDRFLDPGDVVPVA Trigger: AGCCACTGGGACCACATCACCCGGGTCAAGAAACCGGTCATCGCAGCTGTCAATGGTTATGCTCTTGGTGGGGGTTGTGAACTTGCCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS-3UTR CAA 90 bp | GCTTCCCAGGTTTCTGATTCAGAAGACGGGGTGAGCCTGACTTCCAACAACTGGACCCACAGCAGGATCTaGCTCAAAGGTCTCCAGTGC | + |
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Preference number: 5 (lower is better) Translates to: ASQVSDSEDGVSLTSNNWTHSRI*LKGLQC Trigger: GCACTGGAGACCTTTGAGCAAGATCCTGCTGTGGGT...CCAGTTGTTGGAAGTCAGGCTCACCCCGTCTTCTGAATCAGAAACCTGGGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS-3UTR CAA 90 bp | GGAGAATGCACAGGGGAGTGGCTGGCCCAAGCGTGCACCTGCCCTTACAGTGAATCAACAGGAAAAATCTaGCTTACAAGACCTGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: GECTGEWLAQACTCPYSESTGKI*LTRPAC Trigger: GCAGGCAGGTCTTGTAAGCAAGATTTTTCCTGTTGA...TTCACTGTAAGGGCAGGTGCACGCTTGGGCCAGCCACTCCCCTGTGCATTCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS GCA 90 bp | GTCCTGAAATGTTCGGTTCTGCATTTCCTTGATGTCAGCTCCAGCTaGAAAGGCCTTATCCCCACCAGTGAGCACAATGGCACCCACAGC | + |
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Preference number: 5 (lower is better) Translates to: VLKCSVLHFLDVSSS*KGLIPTSEHNGTHS Trigger: GCTGTGGGTGCCATTGTGCTCACTGGTGGGGATAAGGCCTTTGCAGCTGGAGCTGACATCAAGGAAATGCAGAACCGAACATTTCAGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS GCA 90 bp | TGCTTGGTTGAGCTCCTCAATCAGGCCATTGCAAAGTGCATTGAGTaGTTTGGGGCGGTTCAACTGGATCAGCCCCACGCTGCTATTCTT | + |
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Preference number: 5 (lower is better) Translates to: CLVELLNQAIAKCIE*FGAVQLDQPHAAIL Trigger: AAGAATAGCAGCGTGGGGCTGATCCAGTTGAACCGCCCCAAAGCACTCAATGCACTTTGCAATGGCCTGATTGAGGAGCTCAACCAAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS GCA 90 bp | GAGCACAATGGCACCCACAGCAGGATCTTGCTCAAAGGTCTCCAGTaGTTGGTTGAGCTCCTCAATCAGGCCATTGCAAAGTGCATTGAG | + |
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Preference number: 5 (lower is better) Translates to: EHNGTHSRILLKGLQ*LVELLNQAIAKCIE Trigger: CTCAATGCACTTTGCAATGGCCTGATTGAGGAGCTCAACCAAGCACTGGAGACCTTTGAGCAAGATCCTGCTGTGGGTGCCATTGTGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS TCA 90 bp | GGAGGATTTCTGGCTGTCCGAACTGGGCTTTCTCGCCAGCATAGATaGTATCACACATCATGGCAAGTTCACAACCCCCACCAAGAGCAT | + |
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Preference number: 5 (lower is better) Translates to: GGFLAVRTGLSRQHR*YHTSWQVHNPHQEH Trigger: ATGCTCTTGGTGGGGGTTGTGAACTTGCCATGATGTGTGATATCATCTATGCTGGCGAGAAAGCCCAGTTCGGACAGCCAGAAATCCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS CCA 90 bp | ACAATGGCACCCACAGCAGGATCTTGCTCAAAGGTCTCCAGTGCTTaGTTGAGCTCCTCAATCAGGCCATTGCAAAGTGCATTGAGTGCT | + |
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Preference number: 5 (lower is better) Translates to: TMAPTAGSCSKVSSA*LSSSIRPLQSALSA Trigger: AGCACTCAATGCACTTTGCAATGGCCTGATTGAGGAGCTCAACCAAGCACTGGAGACCTTTGAGCAAGATCCTGCTGTGGGTGCCATTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS-3UTR CAA 90 bp | TCATTTATTTGCCTCTCAAAGGACAGGCTGAGCTTTCCAGGGTGGCAAACGGTACGGTTCTGCATTTCCTaGATGTCAGCTCCAGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: SFICLSKDRLSFPGWQTVRFCIS*MSAPAA Trigger: TGCAGCTGGAGCTGACATCAAGGAAATGCAGAACCG...TACCGTTTGCCACCCTGGAAAGCTCAGCCTGTCCTTTGAGAGGCAAATAAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS-3UTR CAA 90 bp | TATATAGTAACTTCCAGGCAGCCAGGGATACACAGTGAAACCTTAGCCATAAGAGTCTCCAGTGCTTGGTaGAGCTCCTCAATCAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: YIVTSRQPGIHSETLAIRVSSAW*SSSIRP Trigger: TGGCCTGATTGAGGAGCTCAACCAAGCACTGGAGAC...TCTTATGGCTAAGGTTTCACTGTGTATCCCTGGCTGCCTGGAAGTTACTATATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS-3UTR CAA 90 bp | ATAGTAACTTCCAGGCAGCCAGGGATACACAGTGAAACCTTAGCCATAAGAAAACCATTGCAAAGTGCATaGAGTGCTTTGGGGCGGTTC | + |
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Preference number: 5 (lower is better) Translates to: IVTSRQPGIHSETLAIRKPLQSA*SALGRF Trigger: GAACCGCCCCAAAGCACTCAATGCACTTTGCAATGG...TTTTCTTATGGCTAAGGTTTCACTGTGTATCCCTGGCTGCCTGGAAGTTACTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS-3UTR CAA 90 bp | GTAGTTACTTTCATTGAATTCTTGAGTTGGGAATCAGCAGAGAGGGCCACTTCCAAAGGTCTCCAGTGCTaGGTTGAGCTCCTCAATCAG | + |
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Preference number: 5 (lower is better) Translates to: VVTFIEFLSWESAERATSKGLQC*VELLNQ Trigger: CTGATTGAGGAGCTCAACCAAGCACTGGAGACCTTT...GGAAGTGGCCCTCTCTGCTGATTCCCAACTCAAGAATTCAATGAAAGTAACTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS GCA 90 bp | CACATTGGATGGCTTCTTCAACCAGTTTTTCAACAGGAAAAATCTTaGTTACAAGACCTGCCTGCTTTGCATCCTGAGCTGAGATGCGGT | + |
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Preference number: 5 (lower is better) Translates to: HIGWLLQPVFQQEKS*LQDLPALHPELRCG Trigger: ACCGCATCTCAGCTCAGGATGCAAAGCAGGCAGGTCTTGTAAGCAAGATTTTTCCTGTTGAAAAACTGGTTGAAGAAGCCATCCAATGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS-3UTR CAA 90 bp | AAAAACCACATTGGCTCTCTAGAGACAACTACAGGTGAGTCGAAACTAAACTGTAGTGCATTGAGTGCTTaGGGGCGGTTCAACTGGATC | + |
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Preference number: 5 (lower is better) Translates to: KNHIGSLETTTGESKLNCSALSA*GRFNWI Trigger: GATCCAGTTGAACCGCCCCAAAGCACTCAATGCACT...ACAGTTTAGTTTCGACTCACCTGTAGTTGTCTCTAGAGAGCCAATGTGGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS-3UTR CAA 90 bp | TCTCTAGAGACAACTACAGGTGAGTCGAAACTAAACTGTGAAGTAGTTACTTTCCAGTGGTCTTTGAAGTaGGCCTTCCTTTTCTCTACA | + |
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Preference number: 5 (lower is better) Translates to: SLETTTGESKLNCEVVTFQWSLK*AFLFST Trigger: TGTAGAGAAAAGGAAGGCCAACTTCAAAGACCACTG...GAAAGTAACTACTTCACAGTTTAGTTTCGACTCACCTGTAGTTGTCTCTAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS CCA 72 bp | GACTGCTCGGGTGAGTCTCTGAGTGCCTCCAGCACCTaGGATGGTCCCCAGGAGGATTTCTGGCTGTCCGAA | + |
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Preference number: 6 (lower is better) Translates to: DCSGESLSASST*DGPQEDFWLSE Trigger: TTCGGACAGCCAGAAATCCTCCTGGGGACCATCCCAGGTGCTGGAGGCACTCAGAGACTCACCCGAGCAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS CAA 90 bp | GGCCTTATCCCCACCAGTGAGCACAATGGCACCCACAGCAGGATCTaGCTCAAAGGTCTCCAGTGCTTGGTTGAGCTCCTCAATCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: GLIPTSEHNGTHSRI*LKGLQCLVELLNQA Trigger: GGCCTGATTGAGGAGCTCAACCAAGCACTGGAGACCTTTGAGCAAGATCCTGCTGTGGGTGCCATTGTGCTCACTGGTGGGGATAAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS TCA 72 bp | TGTCAGCTCCAGCTGCAAAGGCCTTATCCCCACCAGTaGGCACAATGGCACCCACAGCAGGATCTTGCTCAA | + |
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Preference number: 6 (lower is better) Translates to: CQLQLQRPYPHQ*AQWHPQQDLAQ Trigger: TTGAGCAAGATCCTGCTGTGGGTGCCATTGTGCTCACTGGTGGGGATAAGGCCTTTGCAGCTGGAGCTGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS TCA 72 bp | CCTGCTTTGCATCCTGAGCTGAGATGCGGTCACCAGTaGGGACCATCTCCATTGCTAGCGATTTGCCGACTG | + |
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Preference number: 6 (lower is better) Translates to: PALHPELRCGHQ*GPSPLLAICRL Trigger: CAGTCGGCAAATCGCTAGCAATGGAGATGGTCCTCACTGGTGACCGCATCTCAGCTCAGGATGCAAAGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS GCA 72 bp | GAGCTCCTCAATCAGGCCATTGCAAAGTGCATTGAGTaGTTTGGGGCGGTTCAACTGGATCAGCCCCACGCT | + |
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Preference number: 6 (lower is better) Translates to: ELLNQAIAKCIE*FGAVQLDQPHA Trigger: AGCGTGGGGCTGATCCAGTTGAACCGCCCCAAAGCACTCAATGCACTTTGCAATGGCCTGATTGAGGAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS CAA 90 bp | TCCAGTGCTTGGTTGAGCTCCTCAATCAGGCCATTGCAAAGTGCATaGAGTGCTTTGGGGCGGTTCAACTGGATCAGCCCCACGCTGCTA | + |
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Preference number: 6 (lower is better) Translates to: SSAWLSSSIRPLQSA*SALGRFNWISPTLL Trigger: TAGCAGCGTGGGGCTGATCCAGTTGAACCGCCCCAAAGCACTCAATGCACTTTGCAATGGCCTGATTGAGGAGCTCAACCAAGCACTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS TCA 72 bp | CTTGCTTACAAGACCTGCCTGCTTTGCATCCTGAGCTaGGATGCGGTCACCAGTGAGGACCATCTCCATTGC | + |
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Preference number: 6 (lower is better) Translates to: LAYKTCLLCILS*DAVTSEDHLHC Trigger: GCAATGGAGATGGTCCTCACTGGTGACCGCATCTCAGCTCAGGATGCAAAGCAGGCAGGTCTTGTAAGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS GCA 72 bp | GGCACCCACAGCAGGATCTTGCTCAAAGGTCTCCAGTaGTTGGTTGAGCTCCTCAATCAGGCCATTGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: GTHSRILLKGLQ*LVELLNQAIAK Trigger: CTTTGCAATGGCCTGATTGAGGAGCTCAACCAAGCACTGGAGACCTTTGAGCAAGATCCTGCTGTGGGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS GCA 72 bp | TTCACAACCCCCACCAAGAGCATAACCATTGACAGCTaGGATGACCGGTTTCTTGACCCGGGTGATGTGGTC | + |
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Preference number: 6 (lower is better) Translates to: FTTPTKSITIDS*DDRFLDPGDVV Trigger: GACCACATCACCCGGGTCAAGAAACCGGTCATCGCAGCTGTCAATGGTTATGCTCTTGGTGGGGGTTGTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS CAA 72 bp | TCCTCAATCAGGCCATTGCAAAGTGCATTGAGTGCTTaGGGGCGGTTCAACTGGATCAGCCCCACGCTGCTA | + |
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Preference number: 6 (lower is better) Translates to: SSIRPLQSALSA*GRFNWISPTLL Trigger: TAGCAGCGTGGGGCTGATCCAGTTGAACCGCCCCAAAGCACTCAATGCACTTTGCAATGGCCTGATTGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS CAA 72 bp | TGGTTGAGCTCCTCAATCAGGCCATTGCAAAGTGCATaGAGTGCTTTGGGGCGGTTCAACTGGATCAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: WLSSSIRPLQSA*SALGRFNWISP Trigger: GGGGCTGATCCAGTTGAACCGCCCCAAAGCACTCAATGCACTTTGCAATGGCCTGATTGAGGAGCTCAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS GCA 72 bp | TGTTCGGTTCTGCATTTCCTTGATGTCAGCTCCAGCTaGAAAGGCCTTATCCCCACCAGTGAGCACAATGGC | + |
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Preference number: 6 (lower is better) Translates to: CSVLHFLDVSSS*KGLIPTSEHNG Trigger: GCCATTGTGCTCACTGGTGGGGATAAGGCCTTTGCAGCTGGAGCTGACATCAAGGAAATGCAGAACCGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS CCA 72 bp | CCCACAGCAGGATCTTGCTCAAAGGTCTCCAGTGCTTaGTTGAGCTCCTCAATCAGGCCATTGCAAAGTGCA | + |
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Preference number: 6 (lower is better) Translates to: PTAGSCSKVSSA*LSSSIRPLQSA Trigger: TGCACTTTGCAATGGCCTGATTGAGGAGCTCAACCAAGCACTGGAGACCTTTGAGCAAGATCCTGCTGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS CAA 90 bp | TGGTTGAGCTCCTCAATCAGGCCATTGCAAAGTGCATTGAGTGCTTaGGGGCGGTTCAACTGGATCAGCCCCACGCTGCTATTCTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: WLSSSIRPLQSALSA*GRFNWISPTLLFFP Trigger: AGGAAAGAATAGCAGCGTGGGGCTGATCCAGTTGAACCGCCCCAAAGCACTCAATGCACTTTGCAATGGCCTGATTGAGGAGCTCAACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS CAA 90 bp | ATGGCACCCACAGCAGGATCTTGCTCAAAGGTCTCCAGTGCTTGGTaGAGCTCCTCAATCAGGCCATTGCAAAGTGCATTGAGTGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: MAPTAGSCSKVSSAW*SSSIRPLQSALSAL Trigger: CAAAGCACTCAATGCACTTTGCAATGGCCTGATTGAGGAGCTCAACCAAGCACTGGAGACCTTTGAGCAAGATCCTGCTGTGGGTGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS TCA 72 bp | AAAATCTTGCTTACAAGACCTGCCTGCTTTGCATCCTaGGCTGAGATGCGGTCACCAGTGAGGACCATCTCC | + |
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Preference number: 6 (lower is better) Translates to: KILLTRPACFAS*AEMRSPVRTIS Trigger: GGAGATGGTCCTCACTGGTGACCGCATCTCAGCTCAGGATGCAAAGCAGGCAGGTCTTGTAAGCAAGATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS GCA 72 bp | TGCTTGGTTGAGCTCCTCAATCAGGCCATTGCAAAGTaGATTGAGTGCTTTGGGGCGGTTCAACTGGATCAG | + |
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Preference number: 6 (lower is better) Translates to: CLVELLNQAIAK*IECFGAVQLDQ Trigger: CTGATCCAGTTGAACCGCCCCAAAGCACTCAATGCACTTTGCAATGGCCTGATTGAGGAGCTCAACCAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS CCA 72 bp | CTACAAATGCAGTCATCCCTTCTCTCCGGTCATCGGTaGCAAAGGTGGAATAGAAAAGCCTCTTCTCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: LQMQSSLLSGHR*QRWNRKASSPA Trigger: AGCTGGAGAAGAGGCTTTTCTATTCCACCTTTGCCACCGATGACCGGAGAGAAGGGATGACTGCATTTGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS CAA 72 bp | ACAGCAGGATCTTGCTCAAAGGTCTCCAGTGCTTGGTaGAGCTCCTCAATCAGGCCATTGCAAAGTGCATTG | + |
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Preference number: 6 (lower is better) Translates to: TAGSCSKVSSAW*SSSIRPLQSAL Trigger: CAATGCACTTTGCAATGGCCTGATTGAGGAGCTCAACCAAGCACTGGAGACCTTTGAGCAAGATCCTGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS TCA 72 bp | AGTAACAGTCCTGAAATGTTCGGTTCTGCATTTCCTTaGTGTCAGCTCCAGCTGCAAAGGCCTTATCCCCAC | + |
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Preference number: 6 (lower is better) Translates to: SNSPEMFGSAFP*CQLQLQRPYPH Trigger: GTGGGGATAAGGCCTTTGCAGCTGGAGCTGACATCAAGGAAATGCAGAACCGAACATTTCAGGACTGTTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS CCA 72 bp | TTGCAAAGTGCATTGAGTGCTTTGGGGCGGTTCAACTaGATCAGCCCCACGCTGCTATTCTTTCCTTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: LQSALSALGRFN*ISPTLLFFPFF Trigger: AAAGAAAGGAAAGAATAGCAGCGTGGGGCTGATCCAGTTGAACCGCCCCAAAGCACTCAATGCACTTTGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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| CDS CCA 72 bp | CAGTCATCCCTTCTCTCCGGTCATCGGTGGCAAAGGTaGAATAGAAAAGCCTCTTCTCCAGCTTATTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: QSSLLSGHRWQR*NRKASSPAYFL Trigger: AAGGAAATAAGCTGGAGAAGAGGCTTTTCTATTCCACCTTTGCCACCGATGACCGGAGAGAAGGGATGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026538.13 |
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