Pregenerated sensors for ECHDC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019883Ensembl transcript IDs: ENSMUST00000020034.6, ENSMUST00000160399.8, ENSMUST00000161605.8
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGACCGATCAGGAACTGACCGATCAGTTGCAGGGGGTGGGACCATaGGTGTCAATGTCAGATCCAGAAGGCCTGATGGGCAGTGCACAG | + |
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Preference number: 1 (lower is better) Translates to: QTDQELTDQLQGVGP*VSMSDPEGLMGSAQ Trigger: CTGTGCACTGCCCATCAGGCCTTCTGGATCTGACATTGACACTCATGGTCCCACCCCCTGCAACTGATCGGTCAGTTCCTGATCGGTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
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| 3UTR TCA 90 bp | TGCAGGGGGTGGGACCATGAGTGTCAATGTCAGATCCAGAAGGCCTaGTGGGCAGTGCACAGTGACAGAGGTTTAAGCAAATGTCTTCCG | + |
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Preference number: 1 (lower is better) Translates to: CRGWDHECQCQIQKA*WAVHSDRGLSKCLP Trigger: CGGAAGACATTTGCTTAAACCTCTGTCACTGTGCACTGCCCATCAGGCCTTCTGGATCTGACATTGACACTCATGGTCCCACCCCCTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
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| 3UTR TCA 90 bp | AAATGGAAACCAGACAGTAGCCGACCAGTCAGACCGATCAGGAACTaGCCGATCAGTTGCAGGGGGTGGGACCATGAGTGTCAATGTCAG | + |
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Preference number: 1 (lower is better) Translates to: KWKPDSSRPVRPIRN*PISCRGWDHECQCQ Trigger: CTGACATTGACACTCATGGTCCCACCCCCTGCAACTGATCGGTCAGTTCCTGATCGGTCTGACTGGTCGGCTACTGTCTGGTTTCCATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
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| 3UTR GCA 90 bp | TCTTCCGCACCACACTCAAGGGTAAAATGGATACCTGTAAATTTCTaGCCACGTAACATTATACTCATCCTTAGTAGTGCGTTGTGGGAG | + |
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Preference number: 1 (lower is better) Translates to: SSAPHSRVKWIPVNF*PRNIILILSSALWE Trigger: CTCCCACAACGCACTACTAAGGATGAGTATAATGTTACGTGGGCAGAAATTTACAGGTATCCATTTTACCCTTGAGTGTGGTGCGGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
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| 3UTR CCA 90 bp | CAGAGGTTTAAGCAAATGTCTTCCGCACCACACTCAAGGGTAAAATaGATACCTGTAAATTTCTGCCCACGTAACATTATACTCATCCTT | + |
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Preference number: 1 (lower is better) Translates to: QRFKQMSSAPHSRVK*IPVNFCPRNIILIL Trigger: AAGGATGAGTATAATGTTACGTGGGCAGAAATTTACAGGTATCCATTTTACCCTTGAGTGTGGTGCGGAAGACATTTGCTTAAACCTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
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| 3UTR-3UTR TCA 90 bp | AACAAGTGTTTGGGAGGCGGTAGCAGGAGTGTCAGGAATTCACGTCTACCCTTGGCAGTCCCCTTTGAATaGCTTCCGCAGCTCATTTCT | + |
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Preference number: 2 (lower is better) Translates to: NKCLGGGSRSVRNSRLPLAVPFE*LPQLIS Trigger: AGAAATGAGCTGCGGAAGTCATTCAAAGGGGACTGC...CAAGGGTAGACGTGAATTCCTGACACTCCTGCTACCGCCTCCCAAACACTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 |
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| 3UTR CAA 90 bp | AGTAGTGATAGTGAGGATGCCCCTGTGGTAGTTGCACAGCACTCTTaGACCCAACAGAGACCTTTGGTTCCAAATGGAAACCAGACAGTA | + |
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Preference number: 2 (lower is better) Translates to: SSDSEDAPVVVAQHS*TQQRPLVPNGNQTV Trigger: TACTGTCTGGTTTCCATTTGGAACCAAAGGTCTCTGTTGGGTCAAAGAGTGCTGTGCAACTACCACAGGGGCATCCTCACTATCACTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
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| 3UTR-3UTR TCA 90 bp | ACCATGAGTGTCAATGTCAGATCCAGAAGGCCTGATGGGCAGTGCACAGTGACATGGGGTGTTGATAGTTaGGAGCTGTTCAGTATAACA | + |
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Preference number: 2 (lower is better) Translates to: TMSVNVRSRRPDGQCTVTWGVDS*ELFSIT Trigger: TGTTATACTGAACAGCTCTCAACTATCAACACCCCA...TGTCACTGTGCACTGCCCATCAGGCCTTCTGGATCTGACATTGACACTCATGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
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| 3UTR-3UTR GCA 90 bp | GACAGCATAGCTGAACGGAGTCACAGAGGTGAAGGAGAAGAAGATCATGAATCGTCTCTAGTCTCTCCCTaGCTTTTGCTTCCTATGAAG | + |
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Preference number: 2 (lower is better) Translates to: DSIAERSHRGEGEEDHESSLVSP*LLLPMK Trigger: CTTCATAGGAAGCAAAAGGCAGGGAGAGACTAGAGA...CGATTCATGATCTTCTTCTCCTTCACCTCTGTGACTCCGTTCAGCTATGCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
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| 3UTR-3UTR CCA 90 bp | GACAGCATAGCTGAACGGAGTCACAGAGGTGAAGGAGAAGAAGATCATGAATCGCCCAACAGAGACCTTTaGTTCCAAATGGAAACCAGA | + |
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Preference number: 2 (lower is better) Translates to: DSIAERSHRGEGEEDHESPNRDL*FQMETR Trigger: TCTGGTTTCCATTTGGAACCAAAGGTCTCTGTTGGG...CGATTCATGATCTTCTTCTCCTTCACCTCTGTGACTCCGTTCAGCTATGCTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
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| 3UTR CAA 90 bp | CAGTTAACCAGCCCTGTAACACCATCCCCTGATGCAGGCATTTCTTaGGAAGACTCTTTTGCTCATTTACAACTCAGTGGAGACAGCATA | + |
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Preference number: 2 (lower is better) Translates to: QLTSPVTPSPDAGIS*EDSFAHLQLSGDSI Trigger: TATGCTGTCTCCACTGAGTTGTAAATGAGCAAAAGAGTCTTCCAAAGAAATGCCTGCATCAGGGGATGGTGTTACAGGGCTGGTTAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
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| 3UTR-3UTR CCA 90 bp | GACAGCATAGCTGAACGGAGTCACAGAGGTGAAGGAGAAGAAGATCATGAATCGAATGGGCGCTGTGTTTaGAATAAACAAATGTGGAAA | + |
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Preference number: 2 (lower is better) Translates to: DSIAERSHRGEGEEDHESNGRCV*NKQMWK Trigger: TTTCCACATTTGTTTATTCCAAACACAGCGCCCATT...CGATTCATGATCTTCTTCTCCTTCACCTCTGTGACTCCGTTCAGCTATGCTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
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| 3UTR-3UTR CCA 90 bp | AAGGGATATGGGAAAGACAGACCTGAAATTAAAATGTCTAACATGTCTCTGCTGGGGATGGGGACACTTTaGTATTTGTGGCTAAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: KGYGKDRPEIKMSNMSLLGMGTL*YLWLKS Trigger: GCTCTTTAGCCACAAATACCAAAGTGTCCCCATCCC...CAGCAGAGACATGTTAGACATTTTAATTTCAGGTCTGTCTTTCCCATATCCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
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| 3UTR CAA 90 bp | ACTTTATATGGATTGACAAGGGAGGAAATACTGGCGAACACAGAATaGAGAATTTGTCCCGGAGAAAACACATCTGCCTGTGTTTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: TLYGLTREEILANTE*RICPGENTSACVSF Trigger: AAAGGAAACACAGGCAGATGTGTTTTCTCCGGGACAAATTCTCAATTCTGTGTTCGCCAGTATTTCCTCCCTTGTCAATCCATATAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
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| 3UTR-3UTR GCA 90 bp | TCTCTAGTCTCTCCCTGCCTTTTGCTTCCTATGAAGGATATATTAAGTTATTTTCCATGCATGTTCCCCTaGAGCTTCACCTGTACTACA | + |
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Preference number: 2 (lower is better) Translates to: SLVSPCLLLPMKDILSYFPCMFP*SFTCTT Trigger: TGTAGTACAGGTGAAGCTGCAGGGGAACATGCATGG...AAAATAACTTAATATATCCTTCATAGGAAGCAAAAGGCAGGGAGAGACTAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 |
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| 3UTR-3UTR CCA 90 bp | AGTTTCAGAATCTGTAACGCACTTCATGGTGTTCCCTTCCATAAGATTTGCTGTAGTGGTATTTCTGTCTaGGCTACAAGCATAGTGTTA | + |
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Preference number: 2 (lower is better) Translates to: SFRICNALHGVPFHKICCSGISV*ATSIVL Trigger: TAACACTATGCTTGTAGCCCAGACAGAAATACCACT...ACAGCAAATCTTATGGAAGGGAACACCATGAAGTGCGTTACAGATTCTGAAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
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| 3UTR TCA 72 bp | CAGGAACTGACCGATCAGTTGCAGGGGGTGGGACCATaGGTGTCAATGTCAGATCCAGAAGGCCTGATGGGC | + |
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Preference number: 3 (lower is better) Translates to: QELTDQLQGVGP*VSMSDPEGLMG Trigger: GCCCATCAGGCCTTCTGGATCTGACATTGACACTCATGGTCCCACCCCCTGCAACTGATCGGTCAGTTCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
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| 3UTR TCA 72 bp | TGCAGTGCCATCTTCTACAAGGCCCCTGACATCAGTTaGTGGTCAGTTAACCAGCCCTGTAACACCATCCCC | + |
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Preference number: 3 (lower is better) Translates to: CSAIFYKAPDIS*WSVNQPCNTIP Trigger: GGGGATGGTGTTACAGGGCTGGTTAACTGACCATCAACTGATGTCAGGGGCCTTGTAGAAGATGGCACTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
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| 3UTR TCA 72 bp | ATGTCAGATCCAGAAGGCCTGATGGGCAGTGCACAGTaGCAGAGGTTTAAGCAAATGTCTTCCGCACCACAC | + |
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Preference number: 3 (lower is better) Translates to: MSDPEGLMGSAQ*QRFKQMSSAPH Trigger: GTGTGGTGCGGAAGACATTTGCTTAAACCTCTGTCACTGTGCACTGCCCATCAGGCCTTCTGGATCTGACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
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| 3UTR TCA 72 bp | TGGGACCATGAGTGTCAATGTCAGATCCAGAAGGCCTaGTGGGCAGTGCACAGTGACAGAGGTTTAAGCAAA | + |
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Preference number: 3 (lower is better) Translates to: WDHECQCQIQKA*WAVHSDRGLSK Trigger: TTTGCTTAAACCTCTGTCACTGTGCACTGCCCATCAGGCCTTCTGGATCTGACATTGACACTCATGGTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
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| 3UTR GCA 72 bp | GACTTCCGCAGCTCATTTCTAATCATCTCACCTCCATaGATGTTCCCCTGCAGCTTCACCTGTACTACACTC | + |
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Preference number: 3 (lower is better) Translates to: DFRSSFLIISPP*MFPCSFTCTTL Trigger: GAGTGTAGTACAGGTGAAGCTGCAGGGGAACATGCATGGAGGTGAGATGATTAGAAATGAGCTGCGGAAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 |
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| 3UTR-3UTR CAA 90 bp | AGTGTCAATGTCAGATCCAGAAGGCCTGATGGGCAGTGCACAGTGACAGAGGTTGTCTCTCCCTGCCTTTaGCTTCCTATGAAGGATATA | + |
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Preference number: 3 (lower is better) Translates to: SVNVRSRRPDGQCTVTEVVSPCL*LPMKDI Trigger: TATATCCTTCATAGGAAGCAAAAGGCAGGGAGAGAC...AACCTCTGTCACTGTGCACTGCCCATCAGGCCTTCTGGATCTGACATTGACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
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| 3UTR-3UTR CAA 90 bp | ACCATGAGTGTCAATGTCAGATCCAGAAGGCCTGATGGGCAGTGCACAGTGACAAGTGTCTTTTACCTCTaGTTGAGACTGGTTAGAAGT | + |
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Preference number: 3 (lower is better) Translates to: TMSVNVRSRRPDGQCTVTSVFYL*LRLVRS Trigger: ACTTCTAACCAGTCTCAACAAGAGGTAAAAGACACT...TGTCACTGTGCACTGCCCATCAGGCCTTCTGGATCTGACATTGACACTCATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
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| 3UTR-3UTR CAA 90 bp | TCTGCCCACGTAACATTATACTCATCCTTAGTAGTGCGTTGTGGGAGTTGGGGGCACAGAATTGAGAATTaGTCCCGGAGAAAACACATC | + |
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Preference number: 3 (lower is better) Translates to: SAHVTLYSSLVVRCGSWGHRIEN*SRRKHI Trigger: GATGTGTTTTCTCCGGGACAAATTCTCAATTCTGTG...CCCCCAACTCCCACAACGCACTACTAAGGATGAGTATAATGTTACGTGGGCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
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| 3UTR-3UTR CAA 90 bp | AGTGTCAATGTCAGATCCAGAAGGCCTGATGGGCAGTGCACAGTGACAGAGGTTATAAGATTTGCTGTCTaGTCCTTGTACTTGGAGGTT | + |
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Preference number: 3 (lower is better) Translates to: SVNVRSRRPDGQCTVTEVIRFAV*SLYLEV Trigger: AACCTCCAAGTACAAGGACAAGACAGCAAATCTTAT...AACCTCTGTCACTGTGCACTGCCCATCAGGCCTTCTGGATCTGACATTGACACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
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| 3UTR GCA 72 bp | CCACACTCAAGGGTAAAATGGATACCTGTAAATTTCTaGCCACGTAACATTATACTCATCCTTAGTAGTGCG | + |
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Preference number: 3 (lower is better) Translates to: PHSRVKWIPVNF*PRNIILILSSA Trigger: CGCACTACTAAGGATGAGTATAATGTTACGTGGGCAGAAATTTACAGGTATCCATTTTACCCTTGAGTGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
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| 3UTR CCA 72 bp | AAGCAAATGTCTTCCGCACCACACTCAAGGGTAAAATaGATACCTGTAAATTTCTGCCCACGTAACATTATA | + |
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Preference number: 3 (lower is better) Translates to: KQMSSAPHSRVK*IPVNFCPRNII Trigger: TATAATGTTACGTGGGCAGAAATTTACAGGTATCCATTTTACCCTTGAGTGTGGTGCGGAAGACATTTGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
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| 3UTR CCA 72 bp | AATAAGGAAAGAGAAGCTATCAATGGGCGCTGTGTTTaGAATAAACAAATGTGGAAAAAGATCCATAGGTCG | + |
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Preference number: 3 (lower is better) Translates to: NKEREAINGRCV*NKQMWKKIHRS Trigger: CGACCTATGGATCTTTTTCCACATTTGTTTATTCCAAACACAGCGCCCATTGATAGCTTCTCTTTCCTTATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
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| 3UTR CCA 72 bp | TCATTTATTTACATTTACTTTACCAGGCTCCATCAGTaGTATTTCTGTCTGGGCTACAAGCATAGTGTTATA | + |
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Preference number: 3 (lower is better) Translates to: SFIYIYFTRLHQ*YFCLGYKHSVI Trigger: TATAACACTATGCTTGTAGCCCAGACAGAAATACCACTGATGGAGCCTGGTAAAGTAAATGTAAATAAATGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
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| CDS-3UTR TCA 90 bp | AACAAGTGTTTGGGAGGCGGTAGCAGGAGTGTCAGGAATTCACGTCTACCCTTGCTTGTGGAGGCCCACTaGCAAATTTCTCCAGCCACT | + |
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Preference number: 4 (lower is better) Translates to: NKCLGGGSRSVRNSRLPLLVEAH*QISPAT Trigger: AGTGGCTGGAGAAATTTGTCAGTGGGCCTCCACAAG...CAAGGGTAGACGTGAATTCCTGACACTCCTGCTACCGCCTCCCAAACACTTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 |
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| CDS-3UTR GCA 90 bp | AAGTGTTTGGGAGGCGGTAGCAGGAGTGTCAGGAATTCACGTCTACCCTTGGCGTGTTTAGCGTCAGAATaGCAATGCCGTTCTGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: KCLGGGSRSVRNSRLPLACLASE*QCRSAS Trigger: AGAAGCAGAACGGCATTGGCATTCTGACGCTAAACA...CGCCAAGGGTAGACGTGAATTCCTGACACTCCTGCTACCGCCTCCCAAACACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 |
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| CDS-3UTR GCA 90 bp | AGTGTCAATGTCAGATCCAGAAGGCCTGATGGGCAGTGCACAGTGACAGAGGTTTGCTGTAGTAAGTTCTaGTCCTCCACCCATTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: SVNVRSRRPDGQCTVTEVCCSKF*SSTHCP Trigger: TGGGCAATGGGTGGAGGAGCAGAACTTACTACAGCA...AACCTCTGTCACTGTGCACTGCCCATCAGGCCTTCTGGATCTGACATTGACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
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| CDS-3UTR GCA 90 bp | AACAAGTGTTTGGGAGGCGGTAGCAGGAGTGTCAGGAATTCACGTCTACCCTTGTGCTGTAGTAAGTTCTaGTCCTCCACCCATTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: NKCLGGGSRSVRNSRLPLCCSKF*SSTHCP Trigger: TGGGCAATGGGTGGAGGAGCAGAACTTACTACAGCA...CAAGGGTAGACGTGAATTCCTGACACTCCTGCTACCGCCTCCCAAACACTTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 |
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| CDS-3UTR CCA 90 bp | ATTAACAAGTGTTTGGGAGGCGGTAGCAGGAGTGTCAGGAATTCACGTCTACCCTTTCAACCAGACGGCTaGTACCACCCCAGCTTGGAA | + |
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Preference number: 4 (lower is better) Translates to: INKCLGGGSRSVRNSRLPFQPDG*YHPSLE Trigger: TTCCAAGCTGGGGTGGTACCAGCCGTCTGGTTGAAA...GGGTAGACGTGAATTCCTGACACTCCTGCTACCGCCTCCCAAACACTTGTTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 |
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| CDS-3UTR GCA 90 bp | AAGGGAGGAAATACTGGCGAACACAGAATTGAGAATTTGTCCCGGAGAAAACACTGCTCCTCCACCCATTaGCCAGCCTTGAACCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: KGGNTGEHRIENLSRRKHCSSTH*PALNQS Trigger: GCTCTGGTTCAAGGCTGGGCAATGGGTGGAGGAGCA...GTGTTTTCTCCGGGACAAATTCTCAATTCTGTGTTCGCCAGTATTTCCTCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
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| CDS-3UTR GCA 90 bp | AAGTGTTTGGGAGGCGGTAGCAGGAGTGTCAGGAATTCACGTCTACCCTTGGCGCAACCTGAAATCACATaGTGTAGTAAGTTCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: KCLGGGSRSVRNSRLPLAQPEIT*CSKFCS Trigger: GGAGCAGAACTTACTACAGCATGTGATTTCAGGTTG...CGCCAAGGGTAGACGTGAATTCCTGACACTCCTGCTACCGCCTCCCAAACACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 |
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| CDS-3UTR CCA 90 bp | TCTGCCCACGTAACATTATACTCATCCTTAGTAGTGCGTTGTGGGAGTTGGGGGCTCCACTTTCTGGAGTaGAGAGTGCCTTCACAGCAT | + |
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Preference number: 4 (lower is better) Translates to: SAHVTLYSSLVVRCGSWGLHFLE*RVPSQH Trigger: ATGCTGTGAAGGCACTCTCCACTCCAGAAAGTGGAG...CCCCCAACTCCCACAACGCACTACTAAGGATGAGTATAATGTTACGTGGGCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
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| 3UTR CAA 72 bp | AGTGAGGATGCCCCTGTGGTAGTTGCACAGCACTCTTaGACCCAACAGAGACCTTTGGTTCCAAATGGAAAC | + |
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Preference number: 4 (lower is better) Translates to: SEDAPVVVAQHS*TQQRPLVPNGN Trigger: GTTTCCATTTGGAACCAAAGGTCTCTGTTGGGTCAAAGAGTGCTGTGCAACTACCACAGGGGCATCCTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
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| CDS-3UTR TCA 90 bp | AGTGTCAATGTCAGATCCAGAAGGCCTGATGGGCAGTGCACAGTGACAGAGGTTCCTTGTGGACAAATCTaGTCACACTTTCCTCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: SVNVRSRRPDGQCTVTEVPCGQI*SHFPQS Trigger: TGACTGAGGAAAGTGTGATCAGATTTGTCCACAAGG...AACCTCTGTCACTGTGCACTGCCCATCAGGCCTTCTGGATCTGACATTGACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
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| CDS-3UTR TCA 90 bp | TCAGAGACCAATGCTCTGCTACTTTGTATAGCCAGTAGAATGGCTTTCACTGTTCCCATTGCCCAGCCTTaGACCAGAGCAACACTTATT | + |
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Preference number: 4 (lower is better) Translates to: SETNALLLCIASRMAFTVPIAQP*TRATLI Trigger: AATAAGTGTTGCTCTGGTTCAAGGCTGGGCAATGGG...AACAGTGAAAGCCATTCTACTGGCTATACAAAGTAGCAGAGCATTGGTCTCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 |
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| CDS-3UTR TCA 90 bp | TCACCTCCATGCATGTTCCCCTGCAGCTTCACCTGTACTACACTCATTTTAAAGCCTTGTGGACAAATCTaGTCACACTTTCCTCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: SPPCMFPCSFTCTTLILKPCGQI*SHFPQS Trigger: TGACTGAGGAAAGTGTGATCAGATTTGTCCACAAGG...CTTTAAAATGAGTGTAGTACAGGTGAAGCTGCAGGGGAACATGCATGGAGGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 |
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| CDS-3UTR TCA 90 bp | TCCATAAGATTTGCTGTCTTGTCCTTGTACTTGGAGGTTTCTCTTAGTCTGCATCTTGTGGAGGCCCACTaGCAAATTTCTCCAGCCACT | + |
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Preference number: 4 (lower is better) Translates to: SIRFAVLSLYLEVSLSLHLVEAH*QISPAT Trigger: AGTGGCTGGAGAAATTTGTCAGTGGGCCTCCACAAG...ATGCAGACTAAGAGAAACCTCCAAGTACAAGGACAAGACAGCAAATCTTATGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
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| CDS-3UTR GCA 90 bp | ACCATGAGTGTCAATGTCAGATCCAGAAGGCCTGATGGGCAGTGCACAGTGACAAGTCAAAAGACATTTTaGCATTTCTCGGTTCTCACA | + |
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Preference number: 4 (lower is better) Translates to: TMSVNVRSRRPDGQCTVTSQKTF*HFSVLT Trigger: TGTGAGAACCGAGAAATGGCAAAATGTCTTTTGACT...TGTCACTGTGCACTGCCCATCAGGCCTTCTGGATCTGACATTGACACTCATGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
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| CDS-3UTR CCA 90 bp | TCACCTCCATGCATGTTCCCCTGCAGCTTCACCTGTACTACACTCATTTTAAAGACCCCTAATGACTTGTaGAGGCCCACTGACAAATTT | + |
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Preference number: 4 (lower is better) Translates to: SPPCMFPCSFTCTTLILKTPNDL*RPTDKF Trigger: AAATTTGTCAGTGGGCCTCCACAAGTCATTAGGGGT...CTTTAAAATGAGTGTAGTACAGGTGAAGCTGCAGGGGAACATGCATGGAGGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 |
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| CDS-3UTR TCA 90 bp | AACGCACTTCATGGTGTTCCCTTCCATAAGATTTGCTGTCTTGTCCTTGTACTTTCCCACTTAACACTTTaGGAGCTTGTCTGCTGCCAA | + |
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Preference number: 4 (lower is better) Translates to: NALHGVPFHKICCLVLVLSHLTL*ELVCCQ Trigger: TTGGCAGCAGACAAGCTCTCAAAGTGTTAAGTGGGA...AAGTACAAGGACAAGACAGCAAATCTTATGGAAGGGAACACCATGAAGTGCGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
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| CDS-3UTR GCA 90 bp | TCTCTAGTCTCTCCCTGCCTTTTGCTTCCTATGAAGGATATATTAAGTTATTTTTGCTCCTCCACCCATTaGCCAGCCTTGAACCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: SLVSPCLLLPMKDILSYFCSSTH*PALNQS Trigger: GCTCTGGTTCAAGGCTGGGCAATGGGTGGAGGAGCA...AAAATAACTTAATATATCCTTCATAGGAAGCAAAAGGCAGGGAGAGACTAGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 |
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| 3UTR CAA 72 bp | AAGGGAGGAAATACTGGCGAACACAGAATTGAGAATTaGTCCCGGAGAAAACACATCTGCCTGTGTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KGGNTGEHRIEN*SRRKHICLCFL Trigger: AAGGAAACACAGGCAGATGTGTTTTCTCCGGGACAAATTCTCAATTCTGTGTTCGCCAGTATTTCCTCCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
||
| CDS-3UTR GCA 90 bp | TCAGAGACCAATGCTCTGCTACTTTGTATAGCCAGTAGAATGGCTTTCACTGTTTGTTTAGCGTCAGAATaGCAATGCCGTTCTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SETNALLLCIASRMAFTVCLASE*QCRSAS Trigger: AGAAGCAGAACGGCATTGGCATTCTGACGCTAAACA...AACAGTGAAAGCCATTCTACTGGCTATACAAAGTAGCAGAGCATTGGTCTCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTAGTCTCTCCCTGCCTTTTGCTTCCTATGAAGGATATATTAAGTTATTTTTTTCAACCAGACGGCTaGTACCACCCCAGCTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLVSPCLLLPMKDILSYFFQPDG*YHPSLE Trigger: TTCCAAGCTGGGGTGGTACCAGCCGTCTGGTTGAAA...AAAATAACTTAATATATCCTTCATAGGAAGCAAAAGGCAGGGAGAGACTAGAGA 42% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 |
||
| CDS-3UTR TCA 90 bp | GAAGAACCATTTCACATCAGTATCCTATGTATACAGAACACACACACGAAAATACCCATTGCCCAGCCTTaGACCAGAGCAACACTTATT | + |
|
Preference number: 4 (lower is better) Translates to: EEPFHISILCIQNTHTKIPIAQP*TRATLI Trigger: AATAAGTGTTGCTCTGGTTCAAGGCTGGGCAATGGG...TATTTTCGTGTGTGTGTTCTGTATACATAGGATACTGATGTGAAATGGTTCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 |
||
| CDS-3UTR GCA 90 bp | AGTTTCAGAATCTGTAACGCACTTCATGGTGTTCCCTTCCATAAGATTTGCTGTCAACCTGAAATCACATaGTGTAGTAAGTTCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SFRICNALHGVPFHKICCQPEIT*CSKFCS Trigger: GGAGCAGAACTTACTACAGCATGTGATTTCAGGTTG...ACAGCAAATCTTATGGAAGGGAACACCATGAAGTGCGTTACAGATTCTGAAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
||
| CDS-3UTR CCA 90 bp | GAAGAACCATTTCACATCAGTATCCTATGTATACAGAACACACACACGAAAATACTCCACTTTCTGGAGTaGAGAGTGCCTTCACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: EEPFHISILCIQNTHTKILHFLE*RVPSQH Trigger: ATGCTGTGAAGGCACTCTCCACTCCAGAAAGTGGAG...TATTTTCGTGTGTGTGTTCTGTATACATAGGATACTGATGTGAAATGGTTCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 |
||
| CDS-3UTR CCA 90 bp | GAAGAACCATTTCACATCAGTATCCTATGTATACAGAACACACACACGAAAATAGGTACCACCCCAGCTTaGAACTATACCCATCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: EEPFHISILCIQNTHTKIGTTPA*NYTHLL Trigger: AAGGAGATGGGTATAGTTCCAAGCTGGGGTGGTACC...TATTTTCGTGTGTGTGTTCTGTATACATAGGATACTGATGTGAAATGGTTCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 |
||
| CDS-3UTR GCA 90 bp | TTCGACTTAAGAAAGACCAAAACAGCCAGAAACAGCAGTATTAACAAGTGTTTGGATCCACCAGGAAACTaGTCCAGTATCTTCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: FDLRKTKTARNSSINKCLDPPGN*SSIFFT Trigger: AGTGAAGAAGATACTGGAGCAGTTTCCTGGTGGATC...CAAACACTTGTTAATACTGCTGTTTCTGGCTGTTTTGGTCTTTCTTAAGTCGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAGACCAATGCTCTGCTACTTTGTATAGCCAGTAGAATGGCTTTCACTGTTAGGCATTCATTTTATTaGGGTTGTTTAGCGTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SETNALLLCIASRMAFTVRHSFY*GCLASE Trigger: TTCTGACGCTAAACAACCCCAATAAAATGAATGCCT...AACAGTGAAAGCCATTCTACTGGCTATACAAAGTAGCAGAGCATTGGTCTCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 |
||
| CDS-3UTR CCA 90 bp | AGTTTCAGAATCTGTAACGCACTTCATGGTGTTCCCTTCCATAAGATTTGCTGTAGGCATTCATTTTATTaGGGTTGTTTAGCGTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SFRICNALHGVPFHKICCRHSFY*GCLASE Trigger: TTCTGACGCTAAACAACCCCAATAAAATGAATGCCT...ACAGCAAATCTTATGGAAGGGAACACCATGAAGTGCGTTACAGATTCTGAAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
||
| CDS-3UTR CCA 90 bp | GAAGAACCATTTCACATCAGTATCCTATGTATACAGAACACACACACGAAAATAACCCCTAATGACTTGTaGAGGCCCACTGACAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: EEPFHISILCIQNTHTKITPNDL*RPTDKF Trigger: AAATTTGTCAGTGGGCCTCCACAAGTCATTAGGGGT...TATTTTCGTGTGTGTGTTCTGTATACATAGGATACTGATGTGAAATGGTTCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 |
||
| CDS-3UTR GCA 90 bp | CTGTTCCTTACTCAAGAAGTAAGTCTGATTTCTTCAGAAGAGAATAAGGAAAGACTTGTTAACGTGTTTTaGATGAACATAGATAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LFLTQEVSLISSEENKERLVNVF*MNIDKA Trigger: GGCCTTATCTATGTTCATGCAAAACACGTTAACAAG...TCTTTCCTTATTCTCTTCTGAAGAAATCAGACTTACTTCTTGAGTAAGGAACAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
||
| CDS-3UTR CAA 90 bp | AAGTGTTTGGGAGGCGGTAGCAGGAGTGTCAGGAATTCACGTCTACCCTTGGCGCTGCTCCTCCACCCATaGCCCAGCCTTGAACCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: KCLGGGSRSVRNSRLPLALLLHP*PSLEPE Trigger: CTCTGGTTCAAGGCTGGGCAATGGGTGGAGGAGCAG...CGCCAAGGGTAGACGTGAATTCCTGACACTCCTGCTACCGCCTCCCAAACACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 |
||
| CDS-3UTR CAA 90 bp | AACAAGTGTTTGGGAGGCGGTAGCAGGAGTGTCAGGAATTCACGTCTACCCTTGTGGTACCACCCCAGCTaGGAACTATACCCATCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: NKCLGGGSRSVRNSRLPLWYHPS*ELYPSP Trigger: AGGAGATGGGTATAGTTCCAAGCTGGGGTGGTACCA...CAAGGGTAGACGTGAATTCCTGACACTCCTGCTACCGCCTCCCAAACACTTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 |
||
| CDS-3UTR CAA 90 bp | AGTGTTTGGGAGGCGGTAGCAGGAGTGTCAGGAATTCACGTCTACCCTTGGCGCTTCATTTTATTGGGGTaGTTTAGCGTCAGAATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SVWEAVAGVSGIHVYPWRFILLG*FSVRMP Trigger: TGGCATTCTGACGCTAAACAACCCCAATAAAATGAA...GCGCCAAGGGTAGACGTGAATTCCTGACACTCCTGCTACCGCCTCCCAAACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 |
||
| CDS-3UTR CAA 90 bp | ATTAACAAGTGTTTGGGAGGCGGTAGCAGGAGTGTCAGGAATTCACGTCTACCCGTCCCACTTAACACTTaGAGAGCTTGTCTGCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: INKCLGGGSRSVRNSRLPVPLNT*RACLLP Trigger: TGGCAGCAGACAAGCTCTCAAAGTGTTAAGTGGGAC...GGGTAGACGTGAATTCCTGACACTCCTGCTACCGCCTCCCAAACACTTGTTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 |
||
| CDS CCA 90 bp | TCTGCTGCCAATGATTTCAACCAGACGGCTGGTACCACCCCAGCTTaGAACTATACCCATCTCCTTGTGGACAAATCTGATCACACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SAANDFNQTAGTTPA*NYTHLLVDKSDHTF Trigger: GAAAGTGTGATCAGATTTGTCCACAAGGAGATGGGTATAGTTCCAAGCTGGGGTGGTACCAGCCGTCTGGTTGAAATCATTGGCAGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 |
||
| CDS-3UTR CAA 90 bp | TCACCTCCATGCATGTTCCCCTGCAGCTTCACCTGTACTACACTCATTTTAAAGTGGTACCACCCCAGCTaGGAACTATACCCATCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SPPCMFPCSFTCTTLILKWYHPS*ELYPSP Trigger: AGGAGATGGGTATAGTTCCAAGCTGGGGTGGTACCA...CTTTAAAATGAGTGTAGTACAGGTGAAGCTGCAGGGGAACATGCATGGAGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 |
||
| CDS CCA 90 bp | TTAGCGTCAGAATGCCAATGCCGTTCTGCTTCTTTAGGAGGTCAATaGATCCACCAGGAAACTGCTCCAGTATCTTCTTCACTTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LASECQCRSASLGGQ*IHQETAPVSSSLPP Trigger: AGGAGGAAGTGAAGAAGATACTGGAGCAGTTTCCTGGTGGATCCATTGACCTCCTAAAGAAGCAGAACGGCATTGGCATTCTGACGCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 ENSMUST00000161605.8 |
||
| CDS CCA 90 bp | AGACGGCTGGTACCACCCCAGCTTGGAACTATACCCATCTCCTTGTaGACAAATCTGATCACACTTTCCTCAGTCATCAACCTGAAATCA | + |
|
Preference number: 5 (lower is better) Translates to: RRLVPPQLGTIPISL*TNLITLSSVINLKS Trigger: TGATTTCAGGTTGATGACTGAGGAAAGTGTGATCAGATTTGTCCACAAGGAGATGGGTATAGTTCCAAGCTGGGGTGGTACCAGCCGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 |
||
| CDS GCA 90 bp | ACTTTCCTCAGTCATCAACCTGAAATCACATGCTGTAGTAAGTTCTaGTCCTCCACCCATTGCCCAGCCTTGAACCAGAGCAACACTTAT | + |
|
Preference number: 5 (lower is better) Translates to: TFLSHQPEITCCSKF*SSTHCPALNQSNTY Trigger: ATAAGTGTTGCTCTGGTTCAAGGCTGGGCAATGGGTGGAGGAGCAGAACTTACTACAGCATGTGATTTCAGGTTGATGACTGAGGAAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 |
||
| CDS GCA 90 bp | GACAAATCTGATCACACTTTCCTCAGTCATCAACCTGAAATCACATaGTGTAGTAAGTTCTGCTCCTCCACCCATTGCCCAGCCTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: DKSDHTFLSHQPEIT*CSKFCSSTHCPALN Trigger: GTTCAAGGCTGGGCAATGGGTGGAGGAGCAGAACTTACTACAGCATGTGATTTCAGGTTGATGACTGAGGAAAGTGTGATCAGATTTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 |
||
| CDS-3UTR CAA 90 bp | ACCATGAGTGTCAATGTCAGATCCAGAAGGCCTGATGGGCAGTGCACAGTGACAAAGGCATTCATTTTATaGGGGTTGTTTAGCGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: TMSVNVRSRRPDGQCTVTKAFIL*GLFSVR Trigger: TCTGACGCTAAACAACCCCAATAAAATGAATGCCTT...TGTCACTGTGCACTGCCCATCAGGCCTTCTGGATCTGACATTGACACTCATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
||
| CDS-3UTR CAA 90 bp | AAGGGAGGAAATACTGGCGAACACAGAATTGAGAATTTGTCCCGGAGAAAACACACCCATTGCCCAGCCTaGAACCAGAGCAACACTTAT | + |
|
Preference number: 5 (lower is better) Translates to: KGGNTGEHRIENLSRRKHTHCPA*NQSNTY Trigger: ATAAGTGTTGCTCTGGTTCAAGGCTGGGCAATGGGT...GTGTTTTCTCCGGGACAAATTCTCAATTCTGTGTTCGCCAGTATTTCCTCCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
||
| CDS GCA 90 bp | TTCATTTTATTGGGGTTGTTTAGCGTCAGAATGCCAATGCCGTTCTaGTTCTTTAGGAGGTCAATGGATCCACCAGGAAACTGCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: FILLGLFSVRMPMPF*FFRRSMDPPGNCSS Trigger: ACTGGAGCAGTTTCCTGGTGGATCCATTGACCTCCTAAAGAAGCAGAACGGCATTGGCATTCTGACGCTAAACAACCCCAATAAAATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 ENSMUST00000161605.8 |
||
| CDS-3UTR CAA 90 bp | CTGTTCCTTACTCAAGAAGTAAGTCTGATTTCTTCAGAAGAGAATAAGGAAAGACTGCTCCTCCACCCATaGCCCAGCCTTGAACCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LFLTQEVSLISSEENKERLLLHP*PSLEPE Trigger: CTCTGGTTCAAGGCTGGGCAATGGGTGGAGGAGCAG...TCTTTCCTTATTCTCTTCTGAAGAAATCAGACTTACTTCTTGAGTAAGGAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
||
| CDS TCA 90 bp | TCACATGCTGTAGTAAGTTCTGCTCCTCCACCCATTGCCCAGCCTTaGACCAGAGCAACACTTATTAACGGTAGTCTCATAAATCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SHAVVSSAPPPIAQP*TRATLINGSLINLV Trigger: AACAAGATTTATGAGACTACCGTTAATAAGTGTTGCTCTGGTTCAAGGCTGGGCAATGGGTGGAGGAGCAGAACTTACTACAGCATGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 ENSMUST00000161605.8 |
||
| CDS-3UTR CAA 90 bp | TTCGACTTAAGAAAGACCAAAACAGCCAGAAACAGCAGTATTAACAAGTGTTTGACCCATTGCCCAGCCTaGAACCAGAGCAACACTTAT | + |
|
Preference number: 5 (lower is better) Translates to: FDLRKTKTARNSSINKCLTHCPA*NQSNTY Trigger: ATAAGTGTTGCTCTGGTTCAAGGCTGGGCAATGGGT...CAAACACTTGTTAATACTGCTGTTTCTGGCTGTTTTGGTCTTTCTTAAGTCGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 |
||
| CDS GCA 90 bp | GCAACACTTATTAACGGTAGTCTCATAAATCTTGTTAACGTGTTTTaGATGAACATAGATAAGGCCACTCCACTTTCTGGAGTGGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: ATLINGSLINLVNVF*MNIDKATPLSGVES Trigger: ACTCTCCACTCCAGAAAGTGGAGTGGCCTTATCTATGTTCATGCAAAACACGTTAACAAGATTTATGAGACTACCGTTAATAAGTGTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 ENSMUST00000161605.8 |
||
| CDS-3UTR CAA 90 bp | TCCATAAGATTTGCTGTCTTGTCCTTGTACTTGGAGGTTTCTCTTAGTCTGCATCTGTTTGTAAGAGTTTaGTTCTTACAGACAGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: SIRFAVLSLYLEVSLSLHLFVRV*FLQTEM Trigger: CATCTCTGTCTGTAAGAACAAAACTCTTACAAACAG...ATGCAGACTAAGAGAAACCTCCAAGTACAAGGACAAGACAGCAAATCTTATGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
||
| CDS-3UTR CAA 90 bp | ATGTTAAATGATAAGAAAGACAACAGAGCACTGAATTACAATATGGAGAAGGCCACTATACCCATCTCCTaGTGGACAAATCTGATCACA | + |
|
Preference number: 5 (lower is better) Translates to: MLNDKKDNRALNYNMEKATIPIS*WTNLIT Trigger: TGTGATCAGATTTGTCCACAAGGAGATGGGTATAGT...GGCCTTCTCCATATTGTAATTCAGTGCTCTGTTGTCTTTCTTATCATTTAACAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 |
||
| CDS-3UTR CAA 90 bp | CTGTTCCTTACTCAAGAAGTAAGTCTGATTTCTTCAGAAGAGAATAAGGAAAGATTCATTTTATTGGGGTaGTTTAGCGTCAGAATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LFLTQEVSLISSEENKERFILLG*FSVRMP Trigger: TGGCATTCTGACGCTAAACAACCCCAATAAAATGAA...TCTTTCCTTATTCTCTTCTGAAGAAATCAGACTTACTTCTTGAGTAAGGAACAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020034.6 |
||
| CDS-3UTR CAA 90 bp | ATGTTAAATGATAAGAAAGACAACAGAGCACTGAATTACAATATGGAGAAGGCCCTGTTTGTAAGAGTTTaGTTCTTACAGACAGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: MLNDKKDNRALNYNMEKALFVRV*FLQTEM Trigger: CATCTCTGTCTGTAAGAACAAAACTCTTACAAACAG...GGCCTTCTCCATATTGTAATTCAGTGCTCTGTTGTCTTTCTTATCATTTAACAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 |
||
| CDS GCA 72 bp | AGTCATCAACCTGAAATCACATGCTGTAGTAAGTTCTaGTCCTCCACCCATTGCCCAGCCTTGAACCAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SHQPEITCCSKF*SSTHCPALNQS Trigger: GCTCTGGTTCAAGGCTGGGCAATGGGTGGAGGAGCAGAACTTACTACAGCATGTGATTTCAGGTTGATGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 |
||
| CDS CAA 90 bp | ACCAGACGGCTGGTACCACCCCAGCTTGGAACTATACCCATCTCCTaGTGGACAAATCTGATCACACTTTCCTCAGTCATCAACCTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: TRRLVPPQLGTIPIS*WTNLITLSSVINLK Trigger: TTTCAGGTTGATGACTGAGGAAAGTGTGATCAGATTTGTCCACAAGGAGATGGGTATAGTTCCAAGCTGGGGTGGTACCAGCCGTCTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 |
||
| CDS GCA 72 bp | TGCTTCTTTAGGAGGTCAATGGATCCACCAGGAAACTaGTCCAGTATCTTCTTCACTTCCTCCTCGTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: CFFRRSMDPPGN*SSIFFTSSSWK Trigger: CTTCCACGAGGAGGAAGTGAAGAAGATACTGGAGCAGTTTCCTGGTGGATCCATTGACCTCCTAAAGAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 ENSMUST00000161605.8 |
||
| CDS GCA 72 bp | TTGGGGTTGTTTAGCGTCAGAATGCCAATGCCGTTCTaGTTCTTTAGGAGGTCAATGGATCCACCAGGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: LGLFSVRMPMPF*FFRRSMDPPGN Trigger: GTTTCCTGGTGGATCCATTGACCTCCTAAAGAAGCAGAACGGCATTGGCATTCTGACGCTAAACAACCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 ENSMUST00000161605.8 |
||
| CDS CAA 72 bp | CTGGTACCACCCCAGCTTGGAACTATACCCATCTCCTaGTGGACAAATCTGATCACACTTTCCTCAGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: LVPPQLGTIPIS*WTNLITLSSVI Trigger: GATGACTGAGGAAAGTGTGATCAGATTTGTCCACAAGGAGATGGGTATAGTTCCAAGCTGGGGTGGTACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 |
||
| CDS TCA 72 bp | GTAGTAAGTTCTGCTCCTCCACCCATTGCCCAGCCTTaGACCAGAGCAACACTTATTAACGGTAGTCTCATA | + |
|
Preference number: 6 (lower is better) Translates to: VVSSAPPPIAQP*TRATLINGSLI Trigger: TATGAGACTACCGTTAATAAGTGTTGCTCTGGTTCAAGGCTGGGCAATGGGTGGAGGAGCAGAACTTACTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 ENSMUST00000161605.8 |
||
| CDS CCA 72 bp | AATGATTTCAACCAGACGGCTGGTACCACCCCAGCTTaGAACTATACCCATCTCCTTGTGGACAAATCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: NDFNQTAGTTPA*NYTHLLVDKSD Trigger: ATCAGATTTGTCCACAAGGAGATGGGTATAGTTCCAAGCTGGGGTGGTACCAGCCGTCTGGTTGAAATCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 |
||
| CDS CAA 90 bp | TTTAAAGCTTCCTTGGAATCCAGTTTGAGAGTCCCACTTAACACTTaGAGAGCTTGTCTGCTGCCAATGATTTCAACCAGACGGCTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: FKASLESSLRVPLNT*RACLLPMISTRRLV Trigger: TACCAGCCGTCTGGTTGAAATCATTGGCAGCAGACAAGCTCTCAAAGTGTTAAGTGGGACTCTCAAACTGGATTCCAAGGAAGCTTTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 |
||
| CDS GCA 72 bp | AGGCATTCATTTTATTGGGGTTGTTTAGCGTCAGAATaGCAATGCCGTTCTGCTTCTTTAGGAGGTCAATGG | + |
|
Preference number: 6 (lower is better) Translates to: RHSFYWGCLASE*QCRSASLGGQW Trigger: CCATTGACCTCCTAAAGAAGCAGAACGGCATTGGCATTCTGACGCTAAACAACCCCAATAAAATGAATGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 ENSMUST00000161605.8 |
||
| CDS CAA 72 bp | ATCATGACACCTGAGAAGGCATTCATTTTATTGGGGTaGTTTAGCGTCAGAATGCCAATGCCGTTCTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: IMTPEKAFILLG*FSVRMPMPFCF Trigger: GAAGCAGAACGGCATTGGCATTCTGACGCTAAACAACCCCAATAAAATGAATGCCTTCTCAGGTGTCATGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 ENSMUST00000161605.8 |
||
| CDS CAA 72 bp | TGTAGCATCATGACACCTGAGAAGGCATTCATTTTATaGGGGTTGTTTAGCGTCAGAATGCCAATGCCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: CSIMTPEKAFIL*GLFSVRMPMPF Trigger: GAACGGCATTGGCATTCTGACGCTAAACAACCCCAATAAAATGAATGCCTTCTCAGGTGTCATGATGCTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 ENSMUST00000161605.8 |
||
| CDS CAA 90 bp | GAGGGCTGTAAGACCTCATCAGTCAAGCCTATATTTAAAGCTTCCTaGGAATCCAGTTTGAGAGTCCCACTTAACACTTTGAGAGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: EGCKTSSVKPIFKAS*ESSLRVPLNTLRAC Trigger: ACAAGCTCTCAAAGTGTTAAGTGGGACTCTCAAACTGGATTCCAAGGAAGCTTTAAATATAGGCTTGACTGATGAGGTCTTACAGCCCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 |
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| CDS GCA 72 bp | ATTAACGGTAGTCTCATAAATCTTGTTAACGTGTTTTaGATGAACATAGATAAGGCCACTCCACTTTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: INGSLINLVNVF*MNIDKATPLSG Trigger: TCCAGAAAGTGGAGTGGCCTTATCTATGTTCATGCAAAACACGTTAACAAGATTTATGAGACTACCGTTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 ENSMUST00000161605.8 |
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| CDS CAA 72 bp | TCGTATTATAAAGCGACACTCCTGTTTGTAAGAGTTTaGTTCTTACAGACAGAGATGAAGTCAAAAGACATT | + |
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Preference number: 6 (lower is better) Translates to: SYYKATLLFVRV*FLQTEMKSKDI Trigger: AATGTCTTTTGACTTCATCTCTGTCTGTAAGAACAAAACTCTTACAAACAGGAGTGTCGCTTTATAATACGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020034.6 ENSMUST00000160399.8 ENSMUST00000161605.8 |
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