Pregenerated sensors for ECH1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053898Ensembl transcript IDs: ENSMUST00000066264.13, ENSMUST00000132376.2
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAAATGAAGAACTAAGTCATAAAGTTATACACTGGGACACCCCATaGGAGGAGGCCTGGCTCCGTGGAGTCCTCCTCTCTCAGGGTCCG | + |
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Preference number: 1 (lower is better) Translates to: GNEELSHKVIHWDTP*EEAWLRGVLLSQGP Trigger: CGGACCCTGAGAGAGGAGGACTCCACGGAGCCAGGCCTCCTCCCATGGGGTGTCCCAGTGTATAACTTTATGACTTAGTTCTTCATTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| 3UTR CCA 90 bp | GATAAGGCCCCAGGAAATGAAGAACTAAGTCATAAAGTTATACACTaGGACACCCCATGGGAGGAGGCCTGGCTCCGTGGAGTCCTCCTC | + |
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Preference number: 1 (lower is better) Translates to: DKAPGNEELSHKVIH*DTPWEEAWLRGVLL Trigger: GAGGAGGACTCCACGGAGCCAGGCCTCCTCCCATGGGGTGTCCCAGTGTATAACTTTATGACTTAGTTCTTCATTTCCTGGGGCCTTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| 3UTR CCA 72 bp | AAAGTTATACACTGGGACACCCCATGGGAGGAGGCCTaGCTCCGTGGAGTCCTCCTCTCTCAGGGTCCGGAA | + |
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Preference number: 3 (lower is better) Translates to: KVIHWDTPWEEA*LRGVLLSQGPE Trigger: TTCCGGACCCTGAGAGAGGAGGACTCCACGGAGCCAGGCCTCCTCCCATGGGGTGTCCCAGTGTATAACTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| 3UTR CCA 72 bp | GAACTAAGTCATAAAGTTATACACTGGGACACCCCATaGGAGGAGGCCTGGCTCCGTGGAGTCCTCCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: ELSHKVIHWDTP*EEAWLRGVLLS Trigger: AGAGAGGAGGACTCCACGGAGCCAGGCCTCCTCCCATGGGGTGTCCCAGTGTATAACTTTATGACTTAGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| 3UTR CCA 72 bp | CCAGGAAATGAAGAACTAAGTCATAAAGTTATACACTaGGACACCCCATGGGAGGAGGCCTGGCTCCGTGGA | + |
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Preference number: 3 (lower is better) Translates to: PGNEELSHKVIH*DTPWEEAWLRG Trigger: TCCACGGAGCCAGGCCTCCTCCCATGGGGTGTCCCAGTGTATAACTTTATGACTTAGTTCTTCATTTCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS-3UTR GCA 90 bp | CCCATGGGAGGAGGCCTGGCTCCGTGGAGTCCTCCTCTCTCAGGGTCCGGAAGACTGGTACCTCTCAGCTaGTGCATCAGCAGGCCGCGG | + |
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Preference number: 4 (lower is better) Translates to: PMGGGLAPWSPPLSGSGRLVPLS*CISRPR Trigger: CCGCGGCCTGCTGATGCAGCAGCTGAGAGGTACCAG...TCTTCCGGACCCTGAGAGAGGAGGACTCCACGGAGCCAGGCCTCCTCCCATGGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
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| CDS-3UTR GCA 90 bp | CATGGGAGGAGGCCTGGCTCCGTGGAGTCCTCCTCTCTCAGGGTCCGGAAGACAGGAGGTACCAGGCTATaGGGGCCGCATCATCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: HGRRPGSVESSSLRVRKTGGTRL*GPHHLL Trigger: CAGGAGATGATGCGGCCCGCATAGCCTGGTACCTCC...TGTCTTCCGGACCCTGAGAGAGGAGGACTCCACGGAGCCAGGCCTCCTCCCATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
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| CDS-3UTR GCA 90 bp | CATGGGAGGAGGCCTGGCTCCGTGGAGTCCTCCTCTCTCAGGGTCCGGAAGACACAGCCACAGGGCTCTTaGTGGAAATATCAGCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: HGRRPGSVESSSLRVRKTQPQGS*WKYQPP Trigger: TGGCGGCTGATATTTCCAGCAAGAGCCCTGTGGCTG...TGTCTTCCGGACCCTGAGAGAGGAGGACTCCACGGAGCCAGGCCTCCTCCCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS-3UTR GCA 90 bp | CCCCATGGGAGGAGGCCTGGCTCCGTGGAGTCCTCCTCTCTCAGGGTCCGGAAGTTGATTTTTGACCCCTaGACAGCCACAGGGCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: PHGRRPGSVESSSLRVRKLIFDP*TATGLL Trigger: CAAGAGCCCTGTGGCTGTGCAGGGGTCAAAAATCAA...CTTCCGGACCCTGAGAGAGGAGGACTCCACGGAGCCAGGCCTCCTCCCATGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS-3UTR TCA 90 bp | AAAGTTATACACTGGGACACCCCATGGGAGGAGGCCTGGCTCCGTGGAGTCCTCGGCCGCATCATCTCCTaGGGGCTGCATGAGTTCGGA | + |
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Preference number: 4 (lower is better) Translates to: KVIHWDTPWEEAWLRGVLGRIIS*GLHEFG Trigger: TCCGAACTCATGCAGCCCTCAGGAGATGATGCGGCC...GAGGACTCCACGGAGCCAGGCCTCCTCCCATGGGGTGTCCCAGTGTATAACTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
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| CDS-3UTR TCA 90 bp | CCCATGGGAGGAGGCCTGGCTCCGTGGAGTCCTCCTCTCTCAGGGTCCGGAAGAAACGAGGTCCACACCTaGAGTGAACATCTTTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: PMGGGLAPWSPPLSGSGRNEVHT*SEHLSC Trigger: GCAGGAAAGATGTTCACTTCAGGTGTGGACCTCGTT...TCTTCCGGACCCTGAGAGAGGAGGACTCCACGGAGCCAGGCCTCCTCCCATGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132376.2 |
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| CDS-3UTR CCA 90 bp | AAAGTTATACACTGGGACACCCCATGGGAGGAGGCCTGGCTCCGTGGAGTCCTCCCACAGGGCTCTTGCTaGAAATATCAGCCGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: KVIHWDTPWEEAWLRGVLPQGSC*KYQPPG Trigger: CCCTGGCGGCTGATATTTCCAGCAAGAGCCCTGTGG...GAGGACTCCACGGAGCCAGGCCTCCTCCCATGGGGTGTCCCAGTGTATAACTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS-3UTR CCA 90 bp | AAAGTTATACACTGGGACACCCCATGGGAGGAGGCCTGGCTCCGTGGAGTCCTCTGCAGCCTCCGTGAATaGCAGCAATCACTGGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: KVIHWDTPWEEAWLRGVLCSLRE*QQSLAW Trigger: CCAAGCCAGTGATTGCTGCCATTCACGGAGGCTGCA...GAGGACTCCACGGAGCCAGGCCTCCTCCCATGGGGTGTCCCAGTGTATAACTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
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| CDS-3UTR TCA 90 bp | CATGGGAGGAGGCCTGGCTCCGTGGAGTCCTCCTCTCTCAGGGTCCGGAAGACACATGAGGTCAATACCTaGAGTGAACATCTTTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: HGRRPGSVESSSLRVRKTHEVNT*SEHLSC Trigger: GCAGGAAAGATGTTCACTTCAGGTATTGACCTCATG...TGTCTTCCGGACCCTGAGAGAGGAGGACTCCACGGAGCCAGGCCTCCTCCCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
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| CDS-3UTR TCA 90 bp | AAAGTTATACACTGGGACACCCCATGGGAGGAGGCCTGGCTCCGTGGAGTCCTCCATGGCTGCCTGGACTaGTTTGATGATGTCCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: KVIHWDTPWEEAWLRGVLHGCLD*FDDVLG Trigger: ACCCAGGACATCATCAAATCAGTCCAGGCAGCCATG...GAGGACTCCACGGAGCCAGGCCTCCTCCCATGGGGTGTCCCAGTGTATAACTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS-3UTR GCA 90 bp | AAAGTTATACACTGGGACACCCCATGGGAGGAGGCCTGGCTCCGTGGAGTCCTCACCTTGGGCAGTCTCTaGAGTGTTCCTACATCAGCA | + |
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Preference number: 4 (lower is better) Translates to: KVIHWDTPWEEAWLRGVLTLGSL*SVPTSA Trigger: TGCTGATGTAGGAACACTGCAGAGACTGCCCAAGGT...GAGGACTCCACGGAGCCAGGCCTCCTCCCATGGGGTGTCCCAGTGTATAACTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS-3UTR GCA 90 bp | AAAGTTATACACTGGGACACCCCATGGGAGGAGGCCTGGCTCCGTGGAGTCCTCATGATGTCCTGGGTCTaGAGCATGCTCATGTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KVIHWDTPWEEAWLRGVLMMSWV*SMLMFQ Trigger: CTGGAACATGAGCATGCTGCAGACCCAGGACATCAT...GAGGACTCCACGGAGCCAGGCCTCCTCCCATGGGGTGTCCCAGTGTATAACTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS-3UTR CCA 90 bp | AAAGTTATACACTGGGACACCCCATGGGAGGAGGCCTGGCTCCGTGGAGTCCTCACAGTGAAGGTCTTCTaGTACTTGCTGATGAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: KVIHWDTPWEEAWLRGVLTVKVF*YLLMRS Trigger: TGACCTCATCAGCAAGTACCAGAAGACCTTCACTGT...GAGGACTCCACGGAGCCAGGCCTCCTCCCATGGGGTGTCCCAGTGTATAACTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
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| CDS-3UTR TCA 90 bp | CCAGGAAATGAAGAACTAAGTCATAAAGTTATACACTGGGACACCCCATGGGAGGGCTCTGGTTCCCGATaGCCTTGGGCAGTCTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: PGNEELSHKVIHWDTPWEGSGSR*PWAVSA Trigger: TGCAGAGACTGCCCAAGGTCATCGGGAACCAGAGCC...CTCCCATGGGGTGTCCCAGTGTATAACTTTATGACTTAGTTCTTCATTTCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS-3UTR CCA 90 bp | GCCCCAGGAAATGAAGAACTAAGTCATAAAGTTATACACTGGGACACCCCATGGTCGTTGACCAGGCTCTaGTTCCCGATGACCTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: APGNEELSHKVIHWDTPWSLTRL*FPMTLG Trigger: GCCCAAGGTCATCGGGAACCAGAGCCTGGTCAACGA...CCATGGGGTGTCCCAGTGTATAACTTTATGACTTAGTTCTTCATTTCCTGGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS-3UTR TCA 90 bp | AAGGCCCCAGGAAATGAAGAACTAAGTCATAAAGTTATACACTGGGACACCCCACCAATGCAGCCTCCGTaGATGGCAGCAATCACTGGC | + |
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Preference number: 4 (lower is better) Translates to: KAPGNEELSHKVIHWDTPPMQPP*MAAITG Trigger: GCCAGTGATTGCTGCCATTCACGGAGGCTGCATTGG...TGGGGTGTCCCAGTGTATAACTTTATGACTTAGTTCTTCATTTCCTGGGGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
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| CDS-3UTR GCA 90 bp | CCAGGAAATGAAGAACTAAGTCATAAAGTTATACACTGGGACACCCCATGGGAGCGCCAGGGCAAAGGCTaGATTCAGCATGGCGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: PGNEELSHKVIHWDTPWERQGKG*IQHGVL Trigger: AAGGACGCCATGCTGAATGCAGCCTTTGCCCTGGCG...CTCCCATGGGGTGTCCCAGTGTATAACTTTATGACTTAGTTCTTCATTTCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS-3UTR GCA 90 bp | GGAAATGAAGAACTAAGTCATAAAGTTATACACTGGGACACCCCATGGGAGGAGCCTGGGTCTGCAGCATaGTCATGTTCCAGGTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: GNEELSHKVIHWDTPWEEPGSAA*SCSRWP Trigger: TGGCCACCTGGAACATGAGCATGCTGCAGACCCAGG...CTCCTCCCATGGGGTGTCCCAGTGTATAACTTTATGACTTAGTTCTTCATTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS-3UTR GCA 90 bp | AAGGCCCCAGGAAATGAAGAACTAAGTCATAAAGTTATACACTGGGACACCCCACTTGGAGGCCTCTTGTaGAGAGGAGCTCAGAGATCG | + |
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Preference number: 4 (lower is better) Translates to: KAPGNEELSHKVIHWDTPLGGLL*RGAQRS Trigger: CGATCTCTGAGCTCCTCTGCACAAGAGGCCTCCAAG...TGGGGTGTCCCAGTGTATAACTTTATGACTTAGTTCTTCATTTCCTGGGGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
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| CDS-3UTR GCA 90 bp | GGAAATGAAGAACTAAGTCATAAAGTTATACACTGGGACACCCCATGGGAGGAGCGTCAGCCATCATCTTaGGGGCAGAGAAGGTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: GNEELSHKVIHWDTPWEERQPSS*GQRRSA Trigger: AGCTGACCTTCTCTGCCCGCAAGATGATGGCTGACG...CTCCTCCCATGGGGTGTCCCAGTGTATAACTTTATGACTTAGTTCTTCATTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS-3UTR TCA 90 bp | AAGGCCCCAGGAAATGAAGAACTAAGTCATAAAGTTATACACTGGGACACCCCACATGGCTGCCTGGACTaGTTTGATGATGTCCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: KAPGNEELSHKVIHWDTPHGCLD*FDDVLG Trigger: ACCCAGGACATCATCAAATCAGTCCAGGCAGCCATG...TGGGGTGTCCCAGTGTATAACTTTATGACTTAGTTCTTCATTTCCTGGGGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS-3UTR GCA 90 bp | GAAGATAAGGCCCCAGGAAATGAAGAACTAAGTCATAAAGTTATACACTGGGACCGCCAGGGCAAAGGCTaGATTCAGCATGGCGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: EDKAPGNEELSHKVIHWDRQGKG*IQHGVL Trigger: AAGGACGCCATGCTGAATGCAGCCTTTGCCCTGGCG...GTCCCAGTGTATAACTTTATGACTTAGTTCTTCATTTCCTGGGGCCTTATCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS-3UTR CCA 90 bp | GCCCCAGGAAATGAAGAACTAAGTCATAAAGTTATACACTGGGACACCCCATGGATGTTGAAGTACAGCTaGCTGGTACCTCTCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: APGNEELSHKVIHWDTPWMLKYS*LVPLSC Trigger: GCAGCTGAGAGGTACCAGCCAGCTGTACTTCAACAT...CCATGGGGTGTCCCAGTGTATAACTTTATGACTTAGTTCTTCATTTCCTGGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
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| CDS-3UTR CCA 90 bp | GAAGATAAGGCCCCAGGAAATGAAGAACTAAGTCATAAAGTTATACACTGGGACCCACAGGGCTCTTGCTaGAAATATCAGCCGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: EDKAPGNEELSHKVIHWDPQGSC*KYQPPG Trigger: CCCTGGCGGCTGATATTTCCAGCAAGAGCCCTGTGG...GTCCCAGTGTATAACTTTATGACTTAGTTCTTCATTTCCTGGGGCCTTATCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS-3UTR TCA 90 bp | CCAGGAAATGAAGAACTAAGTCATAAAGTTATACACTGGGACACCCCATGGGAGGGTCAATACCTGAAGTaGACATCTTTCCTGCACCGG | + |
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Preference number: 4 (lower is better) Translates to: PGNEELSHKVIHWDTPWEGQYLK*TSFLHR Trigger: CCGGTGCAGGAAAGATGTTCACTTCAGGTATTGACC...CTCCCATGGGGTGTCCCAGTGTATAACTTTATGACTTAGTTCTTCATTTCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
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| CDS-3UTR GCA 90 bp | CCAGGAAATGAAGAACTAAGTCATAAAGTTATACACTGGGACACCCCATGGGAGACCTTGGGCAGTCTCTaGAGTGTTCCTACATCAGCA | + |
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Preference number: 4 (lower is better) Translates to: PGNEELSHKVIHWDTPWETLGSL*SVPTSA Trigger: TGCTGATGTAGGAACACTGCAGAGACTGCCCAAGGT...CTCCCATGGGGTGTCCCAGTGTATAACTTTATGACTTAGTTCTTCATTTCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS-3UTR CCA 90 bp | GGAAATGAAGAACTAAGTCATAAAGTTATACACTGGGACACCCCATGGGAGGAGAGAAAGCCCTGTTCATaGCATTCCTCTTCTCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: GNEELSHKVIHWDTPWEERKPCS*HSSSLA Trigger: GGCCAGAGAAGAGGAATGCCATGAACAGGGCTTTCT...CTCCTCCCATGGGGTGTCCCAGTGTATAACTTTATGACTTAGTTCTTCATTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
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| CDS-3UTR GCA 90 bp | GCCCCAGGAAATGAAGAACTAAGTCATAAAGTTATACACTGGGACACCCCATGGAAAAAGCATCCTGAGTaGAGTAGCGAATGTCACAGG | + |
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Preference number: 4 (lower is better) Translates to: APGNEELSHKVIHWDTPWKKHPE*SSECHR Trigger: CCTGTGACATTCGCTACTGCACTCAGGATGCTTTTT...CCATGGGGTGTCCCAGTGTATAACTTTATGACTTAGTTCTTCATTTCCTGGGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS-3UTR GCA 90 bp | AGTGAAGATAAGGCCCCAGGAAATGAAGAACTAAGTCATAAAGTTATACACTGGCGTCAGCCATCATCTTaGGGGCAGAGAAGGTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: SEDKAPGNEELSHKVIHWRQPSS*GQRRSA Trigger: AGCTGACCTTCTCTGCCCGCAAGATGATGGCTGACG...CCAGTGTATAACTTTATGACTTAGTTCTTCATTTCCTGGGGCCTTATCTTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS-3UTR GCA 90 bp | AGTGAAGATAAGGCCCCAGGAAATGAAGAACTAAGTCATAAAGTTATACACTGGCAGCCACAGGGCTCTTaGTGGAAATATCAGCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: SEDKAPGNEELSHKVIHWQPQGS*WKYQPP Trigger: TGGCGGCTGATATTTCCAGCAAGAGCCCTGTGGCTG...CCAGTGTATAACTTTATGACTTAGTTCTTCATTTCCTGGGGCCTTATCTTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS-3UTR GCA 90 bp | ATTGTTCACAGTGAAGATAAGGCCCCAGGAAATGAAGAACTAAGTCATAAAGTTCCTGGGTCTGCAGCATaGTCATGTTCCAGGTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: IVHSEDKAPGNEELSHKVPGSAA*SCSRWP Trigger: TGGCCACCTGGAACATGAGCATGCTGCAGACCCAGG...AACTTTATGACTTAGTTCTTCATTTCCTGGGGCCTTATCTTCACTGTGAACAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS-3UTR CCA 90 bp | ATTGTTCACAGTGAAGATAAGGCCCCAGGAAATGAAGAACTAAGTCATAAAGTTTCGTTGACCAGGCTCTaGTTCCCGATGACCTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: IVHSEDKAPGNEELSHKVSLTRL*FPMTLG Trigger: GCCCAAGGTCATCGGGAACCAGAGCCTGGTCAACGA...AACTTTATGACTTAGTTCTTCATTTCCTGGGGCCTTATCTTCACTGTGAACAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS-3UTR CCA 90 bp | AAGGCCCCAGGAAATGAAGAACTAAGTCATAAAGTTATACACTGGGACACCCCAGATTTGATGATGTCCTaGGTCTGCAGCATGCTCATG | + |
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Preference number: 4 (lower is better) Translates to: KAPGNEELSHKVIHWDTPDLMMS*VCSMLM Trigger: CATGAGCATGCTGCAGACCCAGGACATCATCAAATC...TGGGGTGTCCCAGTGTATAACTTTATGACTTAGTTCTTCATTTCCTGGGGCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS-3UTR GCA 90 bp | GGAAATGAAGAACTAAGTCATAAAGTTATACACTGGGACACCCCATGGGAGGAGAAAAAGCATCCTGAGTaGAGTAGCGAATGTCACAGG | + |
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Preference number: 4 (lower is better) Translates to: GNEELSHKVIHWDTPWEEKKHPE*SSECHR Trigger: CCTGTGACATTCGCTACTGCACTCAGGATGCTTTTT...CTCCTCCCATGGGGTGTCCCAGTGTATAACTTTATGACTTAGTTCTTCATTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS-3UTR GCA 90 bp | AGTGAAGATAAGGCCCCAGGAAATGAAGAACTAAGTCATAAAGTTATACACTGGTTGATTTTTGACCCCTaGACAGCCACAGGGCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: SEDKAPGNEELSHKVIHWLIFDP*TATGLL Trigger: CAAGAGCCCTGTGGCTGTGCAGGGGTCAAAAATCAA...CCAGTGTATAACTTTATGACTTAGTTCTTCATTTCCTGGGGCCTTATCTTCACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS-3UTR GCA 90 bp | AGTGAAGATAAGGCCCCAGGAAATGAAGAACTAAGTCATAAAGTTATACACTGGATGATGTCCTGGGTCTaGAGCATGCTCATGTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: SEDKAPGNEELSHKVIHWMMSWV*SMLMFQ Trigger: CTGGAACATGAGCATGCTGCAGACCCAGGACATCAT...CCAGTGTATAACTTTATGACTTAGTTCTTCATTTCCTGGGGCCTTATCTTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS-3UTR CCA 90 bp | GGAAATGAAGAACTAAGTCATAAAGTTATACACTGGGACACCCCATGGGAGGAGGGCAGTCCGAGTCTTTaGATATCTTTTGGAAGCATT | + |
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Preference number: 4 (lower is better) Translates to: GNEELSHKVIHWDTPWEEGSPSL*ISFGSI Trigger: AATGCTTCCAAAAGATATCCAAAGACTCGGACTGCC...CTCCTCCCATGGGGTGTCCCAGTGTATAACTTTATGACTTAGTTCTTCATTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
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| CDS-3UTR CCA 90 bp | GAAGATAAGGCCCCAGGAAATGAAGAACTAAGTCATAAAGTTATACACTGGGACGATTTGATGATGTCCTaGGTCTGCAGCATGCTCATG | + |
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Preference number: 4 (lower is better) Translates to: EDKAPGNEELSHKVIHWDDLMMS*VCSMLM Trigger: CATGAGCATGCTGCAGACCCAGGACATCATCAAATC...GTCCCAGTGTATAACTTTATGACTTAGTTCTTCATTTCCTGGGGCCTTATCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS-3UTR CCA 90 bp | AGTGAAGATAAGGCCCCAGGAAATGAAGAACTAAGTCATAAAGTTATACACTGGAATGGCAGCAATCACTaGCTTGGGGCACTTCTCAAT | + |
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Preference number: 4 (lower is better) Translates to: SEDKAPGNEELSHKVIHWNGSNH*LGALLN Trigger: ATTGAGAAGTGCCCCAAGCCAGTGATTGCTGCCATT...CCAGTGTATAACTTTATGACTTAGTTCTTCATTTCCTGGGGCCTTATCTTCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
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| CDS CCA 90 bp | TCAGCCGCCAGGGCAAAGGCTGCATTCAGCATGGCGTCCTTATCTTaGAACACGCGGCTGACCAGCCCACTGTCCAGGGCCTCGTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SAARAKAAFSMASLS*NTRLTSPLSRASSA Trigger: GGCTGACGAGGCCCTGGACAGTGGGCTGGTCAGCCGCGTGTTCCAAGATAAGGACGCCATGCTGAATGCAGCCTTTGCCCTGGCGGCTGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS TCA 90 bp | CAAAGGCTGCATTCAGCATGGCGTCCTTATCTTGGAACACGCGGCTaGCCAGCCCACTGTCCAGGGCCTCGTCAGCCATCATCTTGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: QRLHSAWRPYLGTRG*PAHCPGPRQPSSCG Trigger: CCCGCAAGATGATGGCTGACGAGGCCCTGGACAGTGGGCTGGTCAGCCGCGTGTTCCAAGATAAGGACGCCATGCTGAATGCAGCCTTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS TCA 90 bp | GATGAGGTCACGGAGGTACCAGGCTATGCGGGCCGCATCATCTCCTaGGGGCTGCATGAGTTCGGAGGCCATGTCCATGAGGTCAATACC | + |
|
Preference number: 5 (lower is better) Translates to: DEVTEVPGYAGRIIS*GLHEFGGHVHEVNT Trigger: GGTATTGACCTCATGGACATGGCCTCCGAACTCATGCAGCCCTCAGGAGATGATGCGGCCCGCATAGCCTGGTACCTCCGTGACCTCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
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| CDS GCA 90 bp | TCACGGAGGTACCAGGCTATGCGGGCCGCATCATCTCCTGAGGGCTaGATGAGTTCGGAGGCCATGTCCATGAGGTCAATACCTGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SRRYQAMRAASSPEG*MSSEAMSMRSIPEV Trigger: CACTTCAGGTATTGACCTCATGGACATGGCCTCCGAACTCATGCAGCCCTCAGGAGATGATGCGGCCCGCATAGCCTGGTACCTCCGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
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| CDS GCA 90 bp | AGCCACAGGGCTCTTGCTGGAAATATCAGCCGCCAGGGCAAAGGCTaGATTCAGCATGGCGTCCTTATCTTGGAACACGCGGCTGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: SHRALAGNISRQGKG*IQHGVLILEHAADQ Trigger: CTGGTCAGCCGCGTGTTCCAAGATAAGGACGCCATGCTGAATGCAGCCTTTGCCCTGGCGGCTGATATTTCCAGCAAGAGCCCTGTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS-3UTR CAA 90 bp | AAAGTTATACACTGGGACACCCCATGGGAGGAGGCCTGGCTCCGTGGAGTCCTCTGGTTCCCGATGACCTaGGGCAGTCTCTGCAGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: KVIHWDTPWEEAWLRGVLWFPMT*GSLCSV Trigger: AACACTGCAGAGACTGCCCAAGGTCATCGGGAACCA...GAGGACTCCACGGAGCCAGGCCTCCTCCCATGGGGTGTCCCAGTGTATAACTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS TCA 90 bp | TCACAGGCAGAAACGAGGTCCACACCTCCGCCAATGCAGCCTCCGTaGATGGCAGCAATCACTGGCTTGGGGCACTTCTCAATGACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SQAETRSTPPPMQPP*MAAITGLGHFSMTV Trigger: CACTGTCATTGAGAAGTGCCCCAAGCCAGTGATTGCTGCCATTCACGGAGGCTGCATTGGCGGAGGTGTGGACCTCGTTTCTGCCTGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
||
| CDS GCA 90 bp | GATCGAAGGCTGATGTTGAAGTACAGCTGGCTGGTACCTCTCAGCTaGTGCATCAGCAGGCCGCGGAGTTTACTGGAAACTGTCATCGCG | + |
|
Preference number: 5 (lower is better) Translates to: DRRLMLKYSWLVPLS*CISRPRSLLETVIA Trigger: CGCGATGACAGTTTCCAGTAAACTCCGCGGCCTGCTGATGCAGCAGCTGAGAGGTACCAGCCAGCTGTACTTCAACATCAGCCTTCGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
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| CDS GCA 90 bp | AGCTCGTTGACCAGGCTCTGGTTCCCGATGACCTTGGGCAGTCTCTaGAGTGTTCCTACATCAGCAGCCAAGCCCATATCTACCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSLTRLWFPMTLGSL*SVPTSAAKPISTSL Trigger: CAAGGAGGTAGATATGGGCTTGGCTGCTGATGTAGGAACACTGCAGAGACTGCCCAAGGTCATCGGGAACCAGAGCCTGGTCAACGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS CCA 90 bp | GCAATCACTGGCTTGGGGCACTTCTCAATGACAGTGAAGGTCTTCTaGTACTTGCTGATGAGGTCACGGAGGTACCAGGCTATGCGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AITGLGHFSMTVKVF*YLLMRSRRYQAMRA Trigger: GGCCCGCATAGCCTGGTACCTCCGTGACCTCATCAGCAAGTACCAGAAGACCTTCACTGTCATTGAGAAGTGCCCCAAGCCAGTGATTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
||
| CDS CCA 90 bp | GTCCACACCTCCGCCAATGCAGCCTCCGTGAATGGCAGCAATCACTaGCTTGGGGCACTTCTCAATGACAGTGAAGGTCTTCTGGTACTT | + |
|
Preference number: 5 (lower is better) Translates to: VHTSANAASVNGSNH*LGALLNDSEGLLVL Trigger: AAGTACCAGAAGACCTTCACTGTCATTGAGAAGTGCCCCAAGCCAGTGATTGCTGCCATTCACGGAGGCTGCATTGGCGGAGGTGTGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
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| CDS TCA 90 bp | GCTCTCGTCCACAGAATGGTCTCGGGAGTAGATGAGATTGATTTTTaGCCCCTGCACAGCCACAGGGCTCTTGCTGGAAATATCAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: ALVHRMVSGVDEIDF*PLHSHRALAGNISR Trigger: GCGGCTGATATTTCCAGCAAGAGCCCTGTGGCTGTGCAGGGGTCAAAAATCAATCTCATCTACTCCCGAGACCATTCTGTGGACGAGAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
||
| CDS CCA 90 bp | TCTTTCCTGCACCGGAGACTACAACAGCCCGGCAGTCCGAGTCTTTaGATATCTTTTGGAAGCATTCCACCAACTCCCTCCAGAAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SFLHRRLQQPGSPSL*ISFGSIPPTPSRKP Trigger: GGGCTTTCTGGAGGGAGTTGGTGGAATGCTTCCAAAAGATATCCAAAGACTCGGACTGCCGGGCTGTTGTAGTCTCCGGTGCAGGAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
||
| CDS TCA 90 bp | ATGCTTCTGGGCACTTGTGACTTGAATAGACTCATAGTTGTGGTCTaGGACTTCCTCGGGGGCTCTCTTGGAGGCCTCTTGTGCAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: MLLGTCDLNRLIVVV*DFLGGSLGGLLCRG Trigger: TCCTCTGCACAAGAGGCCTCCAAGAGAGCCCCCGAGGAAGTCTCAGACCACAACTATGAGTCTATTCAAGTCACAAGTGCCCAGAAGCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
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| CDS TCA 90 bp | GAAGGTGATGCTTTTTGTGTCCCTCTTCTCCATGGCTGCCTGGACTaGTTTGATGATGTCCTGGGTCTGCAGCATGCTCATGTTCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: EGDAFCVPLLHGCLD*FDDVLGLQHAHVPG Trigger: ACCTGGAACATGAGCATGCTGCAGACCCAGGACATCATCAAATCAGTCCAGGCAGCCATGGAGAAGAGGGACACAAAAAGCATCACCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS CCA 90 bp | TCTTTTGGAAGCATTCCACCAACTCCCTCCAGAAAGCCCTGTTCATaGCATTCCTCTTCTCTGGCCGGTTTAGCTGCACGTGGAGAACAT | + |
|
Preference number: 5 (lower is better) Translates to: SFGSIPPTPSRKPCS*HSSSLAGLAARGEH Trigger: ATGTTCTCCACGTGCAGCTAAACCGGCCAGAGAAGAGGAATGCCATGAACAGGGCTTTCTGGAGGGAGTTGGTGGAATGCTTCCAAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
||
| CDS CCA 90 bp | TTGGAGAAGGTGATGCTTTTTGTGTCCCTCTTCTCCATGGCTGCCTaGACTGATTTGATGATGTCCTGGGTCTGCAGCATGCTCATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LEKVMLFVSLFSMAA*TDLMMSWVCSMLMF Trigger: GAACATGAGCATGCTGCAGACCCAGGACATCATCAAATCAGTCCAGGCAGCCATGGAGAAGAGGGACACAAAAAGCATCACCTTCTCCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS-3UTR CAA 90 bp | AAGGCCCCAGGAAATGAAGAACTAAGTCATAAAGTTATACACTGGGACACCCCATCGTCAGCCATCATCTaGCGGGCAGAGAAGGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KAPGNEELSHKVIHWDTPSSAII*RAEKVS Trigger: GCTGACCTTCTCTGCCCGCAAGATGATGGCTGACGA...TGGGGTGTCCCAGTGTATAACTTTATGACTTAGTTCTTCATTTCCTGGGGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS-3UTR CAA 90 bp | CCAGGAAATGAAGAACTAAGTCATAAAGTTATACACTGGGACACCCCATGGGAGGCTGCCTGGACTGATTaGATGATGTCCTGGGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PGNEELSHKVIHWDTPWEAAWTD*MMSWVC Trigger: GCAGACCCAGGACATCATCAAATCAGTCCAGGCAGC...CTCCCATGGGGTGTCCCAGTGTATAACTTTATGACTTAGTTCTTCATTTCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS-3UTR CAA 90 bp | GAAGATAAGGCCCCAGGAAATGAAGAACTAAGTCATAAAGTTATACACTGGGACTCTCTTGGAGGCCTCTaGTGCAGAGGAGCTCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: EDKAPGNEELSHKVIHWDSLGGL*CRGAQR Trigger: TCTCTGAGCTCCTCTGCACAAGAGGCCTCCAAGAGA...GTCCCAGTGTATAACTTTATGACTTAGTTCTTCATTTCCTGGGGCCTTATCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
||
| CDS-3UTR CAA 90 bp | GAAGATAAGGCCCCAGGAAATGAAGAACTAAGTCATAAAGTTATACACTGGGACGCTGCCTGGACTGATTaGATGATGTCCTGGGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: EDKAPGNEELSHKVIHWDAAWTD*MMSWVC Trigger: GCAGACCCAGGACATCATCAAATCAGTCCAGGCAGC...GTCCCAGTGTATAACTTTATGACTTAGTTCTTCATTTCCTGGGGCCTTATCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS-3UTR CAA 90 bp | ATTGTTCACAGTGAAGATAAGGCCCCAGGAAATGAAGAACTAAGTCATAAAGTTTCGTCAGCCATCATCTaGCGGGCAGAGAAGGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: IVHSEDKAPGNEELSHKVSSAII*RAEKVS Trigger: GCTGACCTTCTCTGCCCGCAAGATGATGGCTGACGA...AACTTTATGACTTAGTTCTTCATTTCCTGGGGCCTTATCTTCACTGTGAACAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS-3UTR CAA 90 bp | AGTGAAGATAAGGCCCCAGGAAATGAAGAACTAAGTCATAAAGTTATACACTGGGCAGCAATCACTGGCTaGGGGCACTTCTCAATGACA | + |
|
Preference number: 5 (lower is better) Translates to: SEDKAPGNEELSHKVIHWAAITG*GHFSMT Trigger: TGTCATTGAGAAGTGCCCCAAGCCAGTGATTGCTGC...CCAGTGTATAACTTTATGACTTAGTTCTTCATTTCCTGGGGCCTTATCTTCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
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| CDS-3UTR CAA 90 bp | ATTGTTCACAGTGAAGATAAGGCCCCAGGAAATGAAGAACTAAGTCATAAAGTTTGGTTCCCGATGACCTaGGGCAGTCTCTGCAGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: IVHSEDKAPGNEELSHKVWFPMT*GSLCSV Trigger: AACACTGCAGAGACTGCCCAAGGTCATCGGGAACCA...AACTTTATGACTTAGTTCTTCATTTCCTGGGGCCTTATCTTCACTGTGAACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS-3UTR CAA 90 bp | ATTGTTCACAGTGAAGATAAGGCCCCAGGAAATGAAGAACTAAGTCATAAAGTTGTCTTTGGATATCTTTaGGAAGCATTCCACCAACTC | + |
|
Preference number: 5 (lower is better) Translates to: IVHSEDKAPGNEELSHKVVFGYL*EAFHQL Trigger: GAGTTGGTGGAATGCTTCCAAAAGATATCCAAAGAC...AACTTTATGACTTAGTTCTTCATTTCCTGGGGCCTTATCTTCACTGTGAACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
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| CDS CAA 90 bp | ACGCGGCTGACCAGCCCACTGTCCAGGGCCTCGTCAGCCATCATCTaGCGGGCAGAGAAGGTCAGCTCGTTGACCAGGCTCTGGTTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: TRLTSPLSRASSAII*RAEKVSSLTRLWFP Trigger: CGGGAACCAGAGCCTGGTCAACGAGCTGACCTTCTCTGCCCGCAAGATGATGGCTGACGAGGCCCTGGACAGTGGGCTGGTCAGCCGCGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS CAA 90 bp | ATCAGCCGCCAGGGCAAAGGCTGCATTCAGCATGGCGTCCTTATCTaGGAACACGCGGCTGACCAGCCCACTGTCCAGGGCCTCGTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ISRQGKGCIQHGVLI*EHAADQPTVQGLVS Trigger: GCTGACGAGGCCCTGGACAGTGGGCTGGTCAGCCGCGTGTTCCAAGATAAGGACGCCATGCTGAATGCAGCCTTTGCCCTGGCGGCTGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS CAA 72 bp | ACCAGCCCACTGTCCAGGGCCTCGTCAGCCATCATCTaGCGGGCAGAGAAGGTCAGCTCGTTGACCAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: TSPLSRASSAII*RAEKVSSLTRL Trigger: GAGCCTGGTCAACGAGCTGACCTTCTCTGCCCGCAAGATGATGGCTGACGAGGCCCTGGACAGTGGGCTGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS TCA 72 bp | ACGGAGGTACCAGGCTATGCGGGCCGCATCATCTCCTaGGGGCTGCATGAGTTCGGAGGCCATGTCCATGAG | + |
|
Preference number: 6 (lower is better) Translates to: TEVPGYAGRIIS*GLHEFGGHVHE Trigger: CTCATGGACATGGCCTCCGAACTCATGCAGCCCTCAGGAGATGATGCGGCCCGCATAGCCTGGTACCTCCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
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| CDS CCA 72 bp | AGGGCAAAGGCTGCATTCAGCATGGCGTCCTTATCTTaGAACACGCGGCTGACCAGCCCACTGTCCAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RAKAAFSMASLS*NTRLTSPLSRA Trigger: GGCCCTGGACAGTGGGCTGGTCAGCCGCGTGTTCCAAGATAAGGACGCCATGCTGAATGCAGCCTTTGCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS CAA 72 bp | CAGGGCAAAGGCTGCATTCAGCATGGCGTCCTTATCTaGGAACACGCGGCTGACCAGCCCACTGTCCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: QGKGCIQHGVLI*EHAADQPTVQG Trigger: GCCCTGGACAGTGGGCTGGTCAGCCGCGTGTTCCAAGATAAGGACGCCATGCTGAATGCAGCCTTTGCCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS TCA 72 bp | CATTCAGCATGGCGTCCTTATCTTGGAACACGCGGCTaGCCAGCCCACTGTCCAGGGCCTCGTCAGCCATCA | + |
|
Preference number: 6 (lower is better) Translates to: HSAWRPYLGTRG*PAHCPGPRQPS Trigger: TGATGGCTGACGAGGCCCTGGACAGTGGGCTGGTCAGCCGCGTGTTCCAAGATAAGGACGCCATGCTGAATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS TCA 72 bp | GAAACGAGGTCCACACCTCCGCCAATGCAGCCTCCGTaGATGGCAGCAATCACTGGCTTGGGGCACTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: ETRSTPPPMQPP*MAAITGLGHFS Trigger: TGAGAAGTGCCCCAAGCCAGTGATTGCTGCCATTCACGGAGGCTGCATTGGCGGAGGTGTGGACCTCGTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
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| CDS GCA 72 bp | TGTCACAGGCAGAAACGAGGTCCACACCTCCGCCAATaGAGCCTCCGTGAATGGCAGCAATCACTGGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: CHRQKRGPHLRQ*SLREWQQSLAW Trigger: CCAAGCCAGTGATTGCTGCCATTCACGGAGGCTGCATTGGCGGAGGTGTGGACCTCGTTTCTGCCTGTGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
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| CDS CAA 90 bp | GCAGAGAAGGTCAGCTCGTTGACCAGGCTCTGGTTCCCGATGACCTaGGGCAGTCTCTGCAGTGTTCCTACATCAGCAGCCAAGCCCATA | + |
|
Preference number: 6 (lower is better) Translates to: AEKVSSLTRLWFPMT*GSLCSVPTSAAKPI Trigger: TATGGGCTTGGCTGCTGATGTAGGAACACTGCAGAGACTGCCCAAGGTCATCGGGAACCAGAGCCTGGTCAACGAGCTGACCTTCTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS GCA 72 bp | TACCAGGCTATGCGGGCCGCATCATCTCCTGAGGGCTaGATGAGTTCGGAGGCCATGTCCATGAGGTCAATA | + |
|
Preference number: 6 (lower is better) Translates to: YQAMRAASSPEG*MSSEAMSMRSI Trigger: TATTGACCTCATGGACATGGCCTCCGAACTCATGCAGCCCTCAGGAGATGATGCGGCCCGCATAGCCTGGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
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| CDS CAA 90 bp | TTGGAGGCCTCTTGTGCAGAGGAGCTCAGAGATCGAAGGCTGATGTaGAAGTACAGCTGGCTGGTACCTCTCAGCTGCTGCATCAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LEASCAEELRDRRLM*KYSWLVPLSCCISR Trigger: CCTGCTGATGCAGCAGCTGAGAGGTACCAGCCAGCTGTACTTCAACATCAGCCTTCGATCTCTGAGCTCCTCTGCACAAGAGGCCTCCAA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
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| CDS CAA 90 bp | ACTGGCTTGGGGCACTTCTCAATGACAGTGAAGGTCTTCTGGTACTaGCTGATGAGGTCACGGAGGTACCAGGCTATGCGGGCCGCATCA | + |
|
Preference number: 6 (lower is better) Translates to: TGLGHFSMTVKVFWY*LMRSRRYQAMRAAS Trigger: TGATGCGGCCCGCATAGCCTGGTACCTCCGTGACCTCATCAGCAAGTACCAGAAGACCTTCACTGTCATTGAGAAGTGCCCCAAGCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
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| CDS GCA 72 bp | ACCAGGCTCTGGTTCCCGATGACCTTGGGCAGTCTCTaGAGTGTTCCTACATCAGCAGCCAAGCCCATATCT | + |
|
Preference number: 6 (lower is better) Translates to: TRLWFPMTLGSL*SVPTSAAKPIS Trigger: AGATATGGGCTTGGCTGCTGATGTAGGAACACTGCAGAGACTGCCCAAGGTCATCGGGAACCAGAGCCTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS GCA 72 bp | GCTCTTGCTGGAAATATCAGCCGCCAGGGCAAAGGCTaGATTCAGCATGGCGTCCTTATCTTGGAACACGCG | + |
|
Preference number: 6 (lower is better) Translates to: ALAGNISRQGKG*IQHGVLILEHA Trigger: CGCGTGTTCCAAGATAAGGACGCCATGCTGAATGCAGCCTTTGCCCTGGCGGCTGATATTTCCAGCAAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
||
| CDS CCA 72 bp | CATAGTTGTGGTCTGAGACTTCCTCGGGGGCTCTCTTaGAGGCCTCTTGTGCAGAGGAGCTCAGAGATCGAA | + |
|
Preference number: 6 (lower is better) Translates to: HSCGLRLPRGLS*RPLVQRSSEIE Trigger: TTCGATCTCTGAGCTCCTCTGCACAAGAGGCCTCCAAGAGAGCCCCCGAGGAAGTCTCAGACCACAACTATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
||
| CDS GCA 72 bp | ATGTTGAAGTACAGCTGGCTGGTACCTCTCAGCTGCTaGATCAGCAGGCCGCGGAGTTTACTGGAAACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: MLKYSWLVPLSC*ISRPRSLLETV Trigger: GACAGTTTCCAGTAAACTCCGCGGCCTGCTGATGCAGCAGCTGAGAGGTACCAGCCAGCTGTACTTCAACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
||
| CDS GCA 72 bp | CTGATGTTGAAGTACAGCTGGCTGGTACCTCTCAGCTaGTGCATCAGCAGGCCGCGGAGTTTACTGGAAACT | + |
|
Preference number: 6 (lower is better) Translates to: LMLKYSWLVPLS*CISRPRSLLET Trigger: AGTTTCCAGTAAACTCCGCGGCCTGCTGATGCAGCAGCTGAGAGGTACCAGCCAGCTGTACTTCAACATCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
||
| CDS CCA 72 bp | CACCGGAGACTACAACAGCCCGGCAGTCCGAGTCTTTaGATATCTTTTGGAAGCATTCCACCAACTCCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: HRRLQQPGSPSL*ISFGSIPPTPS Trigger: GGAGGGAGTTGGTGGAATGCTTCCAAAAGATATCCAAAGACTCGGACTGCCGGGCTGTTGTAGTCTCCGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
||
| CDS CAA 72 bp | TCTTGTGCAGAGGAGCTCAGAGATCGAAGGCTGATGTaGAAGTACAGCTGGCTGGTACCTCTCAGCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SCAEELRDRRLM*KYSWLVPLSCC Trigger: GCAGCAGCTGAGAGGTACCAGCCAGCTGTACTTCAACATCAGCCTTCGATCTCTGAGCTCCTCTGCACAAGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
||
| CDS CAA 72 bp | GGGCACTTCTCAATGACAGTGAAGGTCTTCTGGTACTaGCTGATGAGGTCACGGAGGTACCAGGCTATGCGG | + |
|
Preference number: 6 (lower is better) Translates to: GHFSMTVKVFWY*LMRSRRYQAMR Trigger: CCGCATAGCCTGGTACCTCCGTGACCTCATCAGCAAGTACCAGAAGACCTTCACTGTCATTGAGAAGTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
||
| CDS CAA 90 bp | GTGATGCTTTTTGTGTCCCTCTTCTCCATGGCTGCCTGGACTGATTaGATGATGTCCTGGGTCTGCAGCATGCTCATGTTCCAGGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VMLFVSLFSMAAWTD*MMSWVCSMLMFQVA Trigger: GGCCACCTGGAACATGAGCATGCTGCAGACCCAGGACATCATCAAATCAGTCCAGGCAGCCATGGAGAAGAGGGACACAAAAAGCATCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
||
| CDS GCA 72 bp | CTGTTCATGGCATTCCTCTTCTCTGGCCGGTTTAGCTaGACGTGGAGAACATGCTTCTGGGCACTTGTGACT | + |
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Preference number: 6 (lower is better) Translates to: LFMAFLFSGRFS*TWRTCFWALVT Trigger: AGTCACAAGTGCCCAGAAGCATGTTCTCCACGTGCAGCTAAACCGGCCAGAGAAGAGGAATGCCATGAACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
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| CDS CCA 72 bp | ACAACAGCCCGGCAGTCCGAGTCTTTGGATATCTTTTaGAAGCATTCCACCAACTCCCTCCAGAAAGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: TTARQSESLDIF*KHSTNSLQKAL Trigger: CAGGGCTTTCTGGAGGGAGTTGGTGGAATGCTTCCAAAAGATATCCAAAGACTCGGACTGCCGGGCTGTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
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| CDS CAA 90 bp | ATCTTTCCTGCACCGGAGACTACAACAGCCCGGCAGTCCGAGTCTTaGGATATCTTTTGGAAGCATTCCACCAACTCCCTCCAGAAAGCC | + |
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Preference number: 6 (lower is better) Translates to: IFPAPETTTARQSES*DIFWKHSTNSLQKA Trigger: GGCTTTCTGGAGGGAGTTGGTGGAATGCTTCCAAAAGATATCCAAAGACTCGGACTGCCGGGCTGTTGTAGTCTCCGGTGCAGGAAAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
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| CDS TCA 72 bp | GCTTTTTGTGTCCCTCTTCTCCATGGCTGCCTGGACTaGTTTGATGATGTCCTGGGTCTGCAGCATGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: AFCVPLLHGCLD*FDDVLGLQHAH Trigger: ATGAGCATGCTGCAGACCCAGGACATCATCAAATCAGTCCAGGCAGCCATGGAGAAGAGGGACACAAAAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS CCA 72 bp | GTGATGCTTTTTGTGTCCCTCTTCTCCATGGCTGCCTaGACTGATTTGATGATGTCCTGGGTCTGCAGCATG | + |
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Preference number: 6 (lower is better) Translates to: VMLFVSLFSMAA*TDLMMSWVCSM Trigger: CATGCTGCAGACCCAGGACATCATCAAATCAGTCCAGGCAGCCATGGAGAAGAGGGACACAAAAAGCATCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS CAA 72 bp | TACAACAGCCCGGCAGTCCGAGTCTTTGGATATCTTTaGGAAGCATTCCACCAACTCCCTCCAGAAAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: YNSPAVRVFGYL*EAFHQLPPESP Trigger: AGGGCTTTCTGGAGGGAGTTGGTGGAATGCTTCCAAAAGATATCCAAAGACTCGGACTGCCGGGCTGTTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066264.13 |
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| CDS CAA 72 bp | TTTGTGTCCCTCTTCTCCATGGCTGCCTGGACTGATTaGATGATGTCCTGGGTCTGCAGCATGCTCATGTTC | + |
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Preference number: 6 (lower is better) Translates to: FVSLFSMAAWTD*MMSWVCSMLMF Trigger: GAACATGAGCATGCTGCAGACCCAGGACATCATCAAATCAGTCCAGGCAGCCATGGAGAAGAGGGACACAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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| CDS TCA 72 bp | CACAGAATGGTCTCGGGAGTAGATGAGATTGATTTTTaGCCCCTGCACAGCCACAGGGCTCTTGCTGGAAAT | + |
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Preference number: 6 (lower is better) Translates to: HRMVSGVDEIDF*PLHSHRALAGN Trigger: ATTTCCAGCAAGAGCCCTGTGGCTGTGCAGGGGTCAAAAATCAATCTCATCTACTCCCGAGACCATTCTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066264.13 ENSMUST00000132376.2 |
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