Pregenerated sensors for ECE1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057530Ensembl transcript IDs: ENSMUST00000102518.10, ENSMUST00000151110.4
Found 205 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | TGTTGGGCTTCCCATGGTTGGACTCCAGCGACAGGACAGGTAAGCTaGGAAGGTCACGCCCATAACCAGGCCCTTCAGCTGCTCACCCCC | + |
Preference number: 1 (lower is better) Translates to: CWASHGWTPATGQVS*EGHAHNQALQLLTP Trigger: GGGGGTGAGCAGCTGAAGGGCCTGGTTATGGGCGTGACCTTCTCAGCTTACCTGTCCTGTCGCTGGAGTCCAACCATGGGAAGCCCAACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR CCA 90 bp | ATCTTGGCTTCGAGTGGTGAGGCTCCATCCATCTTAGGCTTAGGATaGCTGCATACTCTCCAGAGTGGGGAAGGGGCCCTAGGCCGAGGG | + |
Preference number: 1 (lower is better) Translates to: ILASSGEAPSILGLG*LHTLQSGEGALGRG Trigger: CCCTCGGCCTAGGGCCCCTTCCCCACTCTGGAGAGTATGCAGCCATCCTAAGCCTAAGATGGATGGAGCCTCACCACTCGAAGCCAAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR CCA 90 bp | GGTCACGCCCATAACCAGGCCCTTCAGCTGCTCACCCCCTCTGCCTaGGCCCCTACATCTCCTGACTGCACCGGTGACTATAGAAGTAAT | + |
Preference number: 1 (lower is better) Translates to: GHAHNQALQLLTPSA*APTSPDCTGDYRSN Trigger: ATTACTTCTATAGTCACCGGTGCAGTCAGGAGATGTAGGGGCCCAGGCAGAGGGGGTGAGCAGCTGAAGGGCCTGGTTATGGGCGTGACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR TCA 90 bp | TCCCTAACCAGTCTGCGTCTTCCTGCCTTGGCTCCCTGCACACCCTaGGCAATGTCCATATGGCTGAACCCAGTTCAGGACCCCGCTTCT | + |
Preference number: 1 (lower is better) Translates to: SLTSLRLPALAPCTP*AMSIWLNPVQDPAS Trigger: AGAAGCGGGGTCCTGAACTGGGTTCAGCCATATGGACATTGCTCAGGGTGTGCAGGGAGCCAAGGCAGGAAGACGCAGACTGGTTAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR GCA 90 bp | GGCACTACTAGGCTTCTCCCACACATATCACAAGAGCTTGCTCCCTaGAGGAGTCATGAGAACTGCGGTGAGCGCCACCTAGTGGGAGCC | + |
Preference number: 1 (lower is better) Translates to: GTTRLLPHISQELAP*RSHENCGERHLVGA Trigger: GGCTCCCACTAGGTGGCGCTCACCGCAGTTCTCATGACTCCTGCAGGGAGCAAGCTCTTGTGATATGTGTGGGAGAAGCCTAGTAGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR GCA 90 bp | CCGAAGAGCCGAGACCTCGAATGTGTTTACAGGGACCAAGAACCTTaGCAGGTGCCTGCTTGTAGTTCCCATCCTAGCAAGCGGGGCCGA | + |
Preference number: 1 (lower is better) Translates to: PKSRDLECVYRDQEP*QVPACSSHPSKRGR Trigger: TCGGCCCCGCTTGCTAGGATGGGAACTACAAGCAGGCACCTGGCAAGGTTCTTGGTCCCTGTAAACACATTCGAGGTCTCGGCTCTTCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR CCA 90 bp | GTGATGCTGTGGGTGGATGACTTTCTGCCATTCCCTGGAGCCCAATaGGGCTGGGAACATTCCAGTCTTGGCCTGCTCTGGCTACAGCAT | + |
Preference number: 1 (lower is better) Translates to: VMLWVDDFLPFPGAQ*GWEHSSLGLLWLQH Trigger: ATGCTGTAGCCAGAGCAGGCCAAGACTGGAATGTTCCCAGCCCCATTGGGCTCCAGGGAATGGCAGAAAGTCATCCACCCACAGCATCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR TCA 90 bp | AACTGCGGTGAGCGCCACCTAGTGGGAGCCCACATATCTACTACGTaGTGCTGTGGGTGGATGACTTTCTGCCATTCCCTGGAGCCCAAT | + |
Preference number: 1 (lower is better) Translates to: NCGERHLVGAHISTT*CCGWMTFCHSLEPN Trigger: ATTGGGCTCCAGGGAATGGCAGAAAGTCATCCACCCACAGCATCACGTAGTAGATATGTGGGCTCCCACTAGGTGGCGCTCACCGCAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR GCA 90 bp | CTTCAGCTGCTCACCCCCTCTGCCTGGGCCCCTACATCTCCTGACTaGACCGGTGACTATAGAAGTAATTACACCAGCAATGGGCTAAAG | + |
Preference number: 1 (lower is better) Translates to: LQLLTPSAWAPTSPD*TGDYRSNYTSNGLK Trigger: CTTTAGCCCATTGCTGGTGTAATTACTTCTATAGTCACCGGTGCAGTCAGGAGATGTAGGGGCCCAGGCAGAGGGGGTGAGCAGCTGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR GCA 90 bp | GTTCTGCTTTTGTGCCCATCCATCCCTAACCAGTCTGCGTCTTCCTaGCTTGGCTCCCTGCACACCCTGAGCAATGTCCATATGGCTGAA | + |
Preference number: 1 (lower is better) Translates to: VLLLCPSIPNQSASS*LGSLHTLSNVHMAE Trigger: TTCAGCCATATGGACATTGCTCAGGGTGTGCAGGGAGCCAAGGCAGGAAGACGCAGACTGGTTAGGGATGGATGGGCACAAAAGCAGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR CCA 90 bp | AAATATATCTTTAAAGCATTTGACACAGTGGTATTGTGGTGTATCTaGCATTGGATGTGGGCAGGGGGCCATGTCCCACTGCCATTGTCA | + |
Preference number: 1 (lower is better) Translates to: KYIFKAFDTVVLWCI*HWMWAGGHVPLPLS Trigger: TGACAATGGCAGTGGGACATGGCCCCCTGCCCACATCCAATGCCAGATACACCACAATACCACTGTGTCAAATGCTTTAAAGATATATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR-3UTR TCA 90 bp | CCGGGCTTGAGAGAAGGGGTCTTTCTGAGGGCAGATGCCCTTCCCGCTACCGCCCTGCCATTGTCAGTGTaGGGCCCAGGGCTGGCAAGC | + |
Preference number: 2 (lower is better) Translates to: PGLREGVFLRADALPATALPLSV*GPGLAS Trigger: GCTTGCCAGCCCTGGGCCTCACACTGACAATGGCAG...GGCGGTAGCGGGAAGGGCATCTGCCCTCAGAAAGACCCCTTCTCTCAAGCCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR-3UTR CCA 90 bp | CCGGGCTTGAGAGAAGGGGTCTTTCTGAGGGCAGATGCCCTTCCCGCTACCGCCTGCGTCTTCCTGCCTTaGCTCCCTGCACACCCTGAG | + |
Preference number: 2 (lower is better) Translates to: PGLREGVFLRADALPATACVFLP*LPAHPE Trigger: CTCAGGGTGTGCAGGGAGCCAAGGCAGGAAGACGCA...GGCGGTAGCGGGAAGGGCATCTGCCCTCAGAAAGACCCCTTCTCTCAAGCCCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR-3UTR GCA 90 bp | GGTACCCTGGGGCTTCTGGGAATGGGGCTATGGTGTTGGCTTCTAGTCAGGACAGCTGCTCACCCCCTCTaGCTGGGCCCCTACATCTCC | + |
Preference number: 2 (lower is better) Translates to: GTLGLLGMGLWCWLLVRTAAHPL*LGPYIS Trigger: GGAGATGTAGGGGCCCAGGCAGAGGGGGTGAGCAGC...TGTCCTGACTAGAAGCCAACACCATAGCCCCATTCCCAGAAGCCCCAGGGTACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR-3UTR CCA 90 bp | TCCCCAGCTCCAAACCCCATGTCCTTGTGCCTGCAGGGAAACTCCGGGCTTGAGAGGAGGGTGGCAACATaGCTCCGCTGGGAGCTAGCT | + |
Preference number: 2 (lower is better) Translates to: SPAPNPMSLCLQGNSGLERRVAT*LRWELA Trigger: AGCTAGCTCCCAGCGGAGCCATGTTGCCACCCTCCT...CTCAAGCCCGGAGTTTCCCTGCAGGCACAAGGACATGGGGTTTGGAGCTGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR-3UTR CCA 90 bp | TGGAATGGCTGTCCTGTAGGCAGGTTGGGGTGGTACCCTGGGGCTTCTGGGAATCTCACCCCCTCTGCCTaGGCCCCTACATCTCCTGAC | + |
Preference number: 2 (lower is better) Translates to: WNGCPVGRLGWYPGASGNLTPSA*APTSPD Trigger: GTCAGGAGATGTAGGGGCCCAGGCAGAGGGGGTGAG...ATTCCCAGAAGCCCCAGGGTACCACCCCAACCTGCCTACAGGACAGCCATTCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR CAA 90 bp | CAGCTCCAAACCCCATGTCCTTGTGCCTGCAGGGAAACTCCGGGCTaGAGAGAAGGGGTCTTTCTGAGGGCAGATGCCCTTCCCGCTACC | + |
Preference number: 2 (lower is better) Translates to: QLQTPCPCACRETPG*REGVFLRADALPAT Trigger: GGTAGCGGGAAGGGCATCTGCCCTCAGAAAGACCCCTTCTCTCAAGCCCGGAGTTTCCCTGCAGGCACAAGGACATGGGGTTTGGAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR-3UTR TCA 90 bp | GGTACCCTGGGGCTTCTGGGAATGGGGCTATGGTGTTGGCTTCTAGTCAGGACAGGCAAGCCACCAGCTTaGCACATCCAAAGGCCCGCC | + |
Preference number: 2 (lower is better) Translates to: GTLGLLGMGLWCWLLVRTGKPPA*HIQRPA Trigger: GGCGGGCCTTTGGATGTGTCAAGCTGGTGGCTTGCC...TGTCCTGACTAGAAGCCAACACCATAGCCCCATTCCCAGAAGCCCCAGGGTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR-3UTR TCA 90 bp | GGAAACTCCGGGCTTGAGAGAAGGGGTCTTTCTGAGGGCAGATGCCCTTCCCGCGCTCCCTGCACACCCTaGGCAATGTCCATATGGCTG | + |
Preference number: 2 (lower is better) Translates to: GNSGLERRGLSEGRCPSRAPCTP*AMSIWL Trigger: CAGCCATATGGACATTGCTCAGGGTGTGCAGGGAGC...GCGGGAAGGGCATCTGCCCTCAGAAAGACCCCTTCTCTCAAGCCCGGAGTTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR-3UTR CCA 90 bp | CCGGGCTTGAGAGAAGGGGTCTTTCTGAGGGCAGATGCCCTTCCCGCTACCGCCGACGTCTATCTGGAATaGCTGTCCTGTAGGCAGGTT | + |
Preference number: 2 (lower is better) Translates to: PGLREGVFLRADALPATADVYLE*LSCRQV Trigger: AACCTGCCTACAGGACAGCCATTCCAGATAGACGTC...GGCGGTAGCGGGAAGGGCATCTGCCCTCAGAAAGACCCCTTCTCTCAAGCCCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR-3UTR CCA 90 bp | TCCCCAGCTCCAAACCCCATGTCCTTGTGCCTGCAGGGAAACTCCGGGCTTGAGTTCCCTGGAGCCCAATaGGGCTGGGAACATTCCAGT | + |
Preference number: 2 (lower is better) Translates to: SPAPNPMSLCLQGNSGLEFPGAQ*GWEHSS Trigger: ACTGGAATGTTCCCAGCCCCATTGGGCTCCAGGGAA...CTCAAGCCCGGAGTTTCCCTGCAGGCACAAGGACATGGGGTTTGGAGCTGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR CAA 90 bp | ACGCACCGGTGTCCAGGATGCCGGAGCTTCACAGGGGGTCAAATCTaGGCTTCGAGTGGTGAGGCTCCATCCATCTTAGGCTTAGGATGG | + |
Preference number: 2 (lower is better) Translates to: THRCPGCRSFTGGQI*ASSGEAPSILGLGW Trigger: CCATCCTAAGCCTAAGATGGATGGAGCCTCACCACTCGAAGCCAAGATTTGACCCCCTGTGAAGCTCCGGCATCCTGGACACCGGTGCGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR CAA 90 bp | GACGGGATAGAAAGGGCAGATGATCCAGACCCAGAAGGTCCCCCTTaGTGTGGCAGGGCACGGCTCCAGCACCTTCCTGCCTTCTTATGT | + |
Preference number: 2 (lower is better) Translates to: DGIERADDPDPEGPP*CGRARLQHLPAFLC Trigger: ACATAAGAAGGCAGGAAGGTGCTGGAGCCGTGCCCTGCCACACAAAGGGGGACCTTCTGGGTCTGGATCATCTGCCCTTTCTATCCCGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR-3UTR CCA 90 bp | GGGCTTGGGGTTCTGCTTTTGTGCCCATCCATCCCTAACCAGTCTGCGTCTTCCATCTGGCATTGGATGTaGGCAGGGGGCCATGTCCCA | + |
Preference number: 2 (lower is better) Translates to: GLGVLLLCPSIPNQSASSIWHWM*AGGHVP Trigger: TGGGACATGGCCCCCTGCCCACATCCAATGCCAGAT...GGAAGACGCAGACTGGTTAGGGATGGATGGGCACAAAAGCAGAACCCCAAGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR-3UTR CCA 90 bp | TGGAATGGCTGTCCTGTAGGCAGGTTGGGGTGGTACCCTGGGGCTTCTGGGAATACAACAGGGTGCATCTaGTGGGGTGTGGGTTCTCAG | + |
Preference number: 2 (lower is better) Translates to: WNGCPVGRLGWYPGASGNTTGCI*WGVGSQ Trigger: CTGAGAACCCACACCCCACCAGATGCACCCTGTTGT...ATTCCCAGAAGCCCCAGGGTACCACCCCAACCTGCCTACAGGACAGCCATTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR-3UTR CCA 90 bp | TGGAATGGCTGTCCTGTAGGCAGGTTGGGGTGGTACCCTGGGGCTTCTGGGAATACAGGCTACAGAGCTTaGAGGGAGAACTGGGCTGAG | + |
Preference number: 2 (lower is better) Translates to: WNGCPVGRLGWYPGASGNTGYRA*RENWAE Trigger: CTCAGCCCAGTTCTCCCTCCAAGCTCTGTAGCCTGT...ATTCCCAGAAGCCCCAGGGTACCACCCCAACCTGCCTACAGGACAGCCATTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR-3UTR CCA 90 bp | GGCTTGGGGTTCTGCTTTTGTGCCCATCCATCCCTAACCAGTCTGCGTCTTCCTGCCTTCTCCACAGCCTaGGGTTCCCAGGGGGTAAAT | + |
Preference number: 2 (lower is better) Translates to: GLGFCFCAHPSLTSLRLPAFSTA*GSQGVN Trigger: ATTTACCCCCTGGGAACCCCAGGCTGTGGAGAAGGC...AGGAAGACGCAGACTGGTTAGGGATGGATGGGCACAAAAGCAGAACCCCAAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR-3UTR CCA 90 bp | CCGGGCTTGAGAGAAGGGGTCTTTCTGAGGGCAGATGCCCTTCCCGCTACCGCCGCCTCAACTATCACTTaGGTATCAACCCATCCTTGT | + |
Preference number: 2 (lower is better) Translates to: PGLREGVFLRADALPATAASTIT*VSTHPC Trigger: ACAAGGATGGGTTGATACCCAAGTGATAGTTGAGGC...GGCGGTAGCGGGAAGGGCATCTGCCCTCAGAAAGACCCCTTCTCTCAAGCCCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR-3UTR CCA 90 bp | GGCTTGGGGTTCTGCTTTTGTGCCCATCCATCCCTAACCAGTCTGCGTCTTCCTGTACCCTGGGGCTTCTaGGAATGGGGCTATGGTGTT | + |
Preference number: 2 (lower is better) Translates to: GLGFCFCAHPSLTSLRLPVPWGF*EWGYGV Trigger: AACACCATAGCCCCATTCCCAGAAGCCCCAGGGTAC...AGGAAGACGCAGACTGGTTAGGGATGGATGGGCACAAAAGCAGAACCCCAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR-3UTR TCA 90 bp | CAAGAGCTTGCTCCCTGCAGGAGTCATGAGAACTGCGGTGAGCGCCACCTAGTGCTACAAGGACTGAATTaGTTCAATGTGCGTGCCACG | + |
Preference number: 2 (lower is better) Translates to: QELAPCRSHENCGERHLVLQGLN*FNVRAT Trigger: CGTGGCACGCACATTGAATCAATTCAGTCCTTGTAG...CACTAGGTGGCGCTCACCGCAGTTCTCATGACTCCTGCAGGGAGCAAGCTCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR-3UTR CCA 90 bp | GTGTTGGCTTCTAGTCAGGACACTTGGGGGCTCCACTGGGAAAGCAAGCCAAATAGTGCTCGCTCAAACTaGCAGCCTTCTCCACAGCCT | + |
Preference number: 2 (lower is better) Translates to: VLASSQDTWGLHWESKPNSARSN*QPSPQP Trigger: AGGCTGTGGAGAAGGCTGCCAGTTTGAGCGAGCACT...ATTTGGCTTGCTTTCCCAGTGGAGCCCCCAAGTGTCCTGACTAGAAGCCAACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR-3UTR GCA 90 bp | GGTACCCTGGGGCTTCTGGGAATGGGGCTATGGTGTTGGCTTCTAGTCAGGACATCAGGATGTCAGAATTaGTACAGAGAGGCAACGGGT | + |
Preference number: 2 (lower is better) Translates to: GTLGLLGMGLWCWLLVRTSGCQN*YREATG Trigger: ACCCGTTGCCTCTCTGTAGCAATTCTGACATCCTGA...TGTCCTGACTAGAAGCCAACACCATAGCCCCATTCCCAGAAGCCCCAGGGTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR-3UTR CCA 90 bp | GGCTTGGGGTTCTGCTTTTGTGCCCATCCATCCCTAACCAGTCTGCGTCTTCCTGACACAGTGGTATTGTaGTGTATCTGGCATTGGATG | + |
Preference number: 2 (lower is better) Translates to: GLGFCFCAHPSLTSLRLPDTVVL*CIWHWM Trigger: CATCCAATGCCAGATACACCACAATACCACTGTGTC...AGGAAGACGCAGACTGGTTAGGGATGGATGGGCACAAAAGCAGAACCCCAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR CCA 72 bp | GCCCTAGGCCGAGGGGCTGGGAGGAGGGTGGCAACATaGCTCCGCTGGGAGCTAGCTGCAGCTCCTTCCCTT | + |
Preference number: 3 (lower is better) Translates to: ALGRGAGRRVAT*LRWELAAAPSL Trigger: AAGGGAAGGAGCTGCAGCTAGCTCCCAGCGGAGCCATGTTGCCACCCTCCTCCCAGCCCCTCGGCCTAGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR GCA 72 bp | CACTTGGGGGCTCCACTGGGAAAGCAAGCCAAATGCTaGCTCCTAGTGGGGCTCAGGGTCTGCAGCCTGGGG | + |
Preference number: 3 (lower is better) Translates to: HLGAPLGKQAKC*LLVGLRVCSLG Trigger: CCCCAGGCTGCAGACCCTGAGCCCCACTAGGAGGCAGCATTTGGCTTGCTTTCCCAGTGGAGCCCCCAAGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR GCA 72 bp | GAGGAGGGTGGCAACATGGCTCCGCTGGGAGCTAGCTaGAGCTCCTTCCCTTTTTCTGTCCGTGCTCTCTGC | + |
Preference number: 3 (lower is better) Translates to: EEGGNMAPLGAS*SSFPFSVRALC Trigger: GCAGAGAGCACGGACAGAAAAAGGGAAGGAGCTGCAGCTAGCTCCCAGCGGAGCCATGTTGCCACCCTCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR CCA 72 bp | GAATGGCTGTCCTGTAGGCAGGTTGGGGTGGTACCCTaGGGCTTCTGGGAATGGGGCTATGGTGTTGGCTTC | + |
Preference number: 3 (lower is better) Translates to: EWLSCRQVGVVP*GFWEWGYGVGF Trigger: GAAGCCAACACCATAGCCCCATTCCCAGAAGCCCCAGGGTACCACCCCAACCTGCCTACAGGACAGCCATTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR CCA 72 bp | GGTCAGCAGCTCCTGACACTGGACGTCTATCTGGAATaGCTGTCCTGTAGGCAGGTTGGGGTGGTACCCTGG | + |
Preference number: 3 (lower is better) Translates to: GQQLLTLDVYLE*LSCRQVGVVPW Trigger: CCAGGGTACCACCCCAACCTGCCTACAGGACAGCCATTCCAGATAGACGTCCAGTGTCAGGAGCTGCTGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR-3UTR CAA 90 bp | GGCTTGGGGTTCTGCTTTTGTGCCCATCCATCCCTAACCAGTCTGCGTCTTCCTTGTCCTGTAGGCAGGTaGGGGTGGTACCCTGGGGCT | + |
Preference number: 3 (lower is better) Translates to: GLGFCFCAHPSLTSLRLPCPVGR*GWYPGA Trigger: AGCCCCAGGGTACCACCCCAACCTGCCTACAGGACA...AGGAAGACGCAGACTGGTTAGGGATGGATGGGCACAAAAGCAGAACCCCAAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR CCA 72 bp | TGGGTGGATGACTTTCTGCCATTCCCTGGAGCCCAATaGGGCTGGGAACATTCCAGTCTTGGCCTGCTCTGG | + |
Preference number: 3 (lower is better) Translates to: WVDDFLPFPGAQ*GWEHSSLGLLW Trigger: CCAGAGCAGGCCAAGACTGGAATGTTCCCAGCCCCATTGGGCTCCAGGGAATGGCAGAAAGTCATCCACCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR GCA 72 bp | TCACAAGAGCTTGCTCCCTGCAGGAGTCATGAGAACTaGGGTGAGCGCCACCTAGTGGGAGCCCACATATCT | + |
Preference number: 3 (lower is better) Translates to: SQELAPCRSHEN*GERHLVGAHIS Trigger: AGATATGTGGGCTCCCACTAGGTGGCGCTCACCGCAGTTCTCATGACTCCTGCAGGGAGCAAGCTCTTGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR GCA 72 bp | TTGTGCCCATCCATCCCTAACCAGTCTGCGTCTTCCTaGCTTGGCTCCCTGCACACCCTGAGCAATGTCCAT | + |
Preference number: 3 (lower is better) Translates to: LCPSIPNQSASS*LGSLHTLSNVH Trigger: ATGGACATTGCTCAGGGTGTGCAGGGAGCCAAGGCAGGAAGACGCAGACTGGTTAGGGATGGATGGGCACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR CCA 72 bp | GATGACTTTCTGCCATTCCCTGGAGCCCAATGGGGCTaGGAACATTCCAGTCTTGGCCTGCTCTGGCTACAG | + |
Preference number: 3 (lower is better) Translates to: DDFLPFPGAQWG*EHSSLGLLWLQ Trigger: CTGTAGCCAGAGCAGGCCAAGACTGGAATGTTCCCAGCCCCATTGGGCTCCAGGGAATGGCAGAAAGTCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR-3UTR CAA 90 bp | GGTACCCTGGGGCTTCTGGGAATGGGGCTATGGTGTTGGCTTCTAGTCAGGACAATCAACCCATCCTTGTaGGGCTTCCCATGGTTGGAC | + |
Preference number: 3 (lower is better) Translates to: GTLGLLGMGLWCWLLVRTINPSL*GFPWLD Trigger: GTCCAACCATGGGAAGCCCAACAAGGATGGGTTGAT...TGTCCTGACTAGAAGCCAACACCATAGCCCCATTCCCAGAAGCCCCAGGGTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR TCA 72 bp | GAGCCCACATATCTACTACGTGATGCTGTGGGTGGATaGCTTTCTGCCATTCCCTGGAGCCCAATGGGGCTG | + |
Preference number: 3 (lower is better) Translates to: EPTYLLRDAVGG*LSAIPWSPMGL Trigger: CAGCCCCATTGGGCTCCAGGGAATGGCAGAAAGTCATCCACCCACAGCATCACGTAGTAGATATGTGGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR TCA 72 bp | GAGCGCCACCTAGTGGGAGCCCACATATCTACTACGTaGTGCTGTGGGTGGATGACTTTCTGCCATTCCCTG | + |
Preference number: 3 (lower is better) Translates to: ERHLVGAHISTT*CCGWMTFCHSL Trigger: CAGGGAATGGCAGAAAGTCATCCACCCACAGCATCACGTAGTAGATATGTGGGCTCCCACTAGGTGGCGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR TCA 72 bp | TGGCTCCCTGCACACCCTGAGCAATGTCCATATGGCTaGACCCAGTTCAGGACCCCGCTTCTAGATACCAGT | + |
Preference number: 3 (lower is better) Translates to: WLPAHPEQCPYG*TQFRTPLLDTS Trigger: ACTGGTATCTAGAAGCGGGGTCCTGAACTGGGTTCAGCCATATGGACATTGCTCAGGGTGTGCAGGGAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR GCA 72 bp | AGGCTTCTCCCACACATATCACAAGAGCTTGCTCCCTaGAGGAGTCATGAGAACTGCGGTGAGCGCCACCTA | + |
Preference number: 3 (lower is better) Translates to: RLLPHISQELAP*RSHENCGERHL Trigger: TAGGTGGCGCTCACCGCAGTTCTCATGACTCCTGCAGGGAGCAAGCTCTTGTGATATGTGTGGGAGAAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR CCA 72 bp | AATGGGGCTATGGTGTTGGCTTCTAGTCAGGACACTTaGGGGCTCCACTGGGAAAGCAAGCCAAATGCTGCC | + |
Preference number: 3 (lower is better) Translates to: NGAMVLASSQDT*GLHWESKPNAA Trigger: GGCAGCATTTGGCTTGCTTTCCCAGTGGAGCCCCCAAGTGTCCTGACTAGAAGCCAACACCATAGCCCCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR-3UTR CAA 90 bp | AGGTCCCCCTTTGTGTGGCAGGGCACGGCTCCAGCACCTTCCTGCCTTCTTATGTTTGACACAGTGGTATaGTGGTGTATCTGGCATTGG | + |
Preference number: 3 (lower is better) Translates to: RSPFVWQGTAPAPSCLLMFDTVV*WCIWHW Trigger: CCAATGCCAGATACACCACAATACCACTGTGTCAAA...CATAAGAAGGCAGGAAGGTGCTGGAGCCGTGCCCTGCCACACAAAGGGGGACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR GCA 72 bp | CTCACCCCCTCTGCCTGGGCCCCTACATCTCCTGACTaGACCGGTGACTATAGAAGTAATTACACCAGCAAT | + |
Preference number: 3 (lower is better) Translates to: LTPSAWAPTSPD*TGDYRSNYTSN Trigger: ATTGCTGGTGTAATTACTTCTATAGTCACCGGTGCAGTCAGGAGATGTAGGGGCCCAGGCAGAGGGGGTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR CCA 72 bp | CCTAGTGGGAGCCCACATATCTACTACGTGATGCTGTaGGTGGATGACTTTCTGCCATTCCCTGGAGCCCAA | + |
Preference number: 3 (lower is better) Translates to: PSGSPHIYYVML*VDDFLPFPGAQ Trigger: TTGGGCTCCAGGGAATGGCAGAAAGTCATCCACCCACAGCATCACGTAGTAGATATGTGGGCTCCCACTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR-3UTR CAA 90 bp | AGGTCCCCCTTTGTGTGGCAGGGCACGGCTCCAGCACCTTCCTGCCTTCTTATGTTAGTGGGGTTTCCTTaGTCCACAGGTTGTTTAGAA | + |
Preference number: 3 (lower is better) Translates to: RSPFVWQGTAPAPSCLLMLVGFP*STGCLE Trigger: TTCTAAACAACCTGTGGACAAAGGAAACCCCACTAA...CATAAGAAGGCAGGAAGGTGCTGGAGCCGTGCCCTGCCACACAAAGGGGGACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR GCA 72 bp | CGAGACCTCGAATGTGTTTACAGGGACCAAGAACCTTaGCAGGTGCCTGCTTGTAGTTCCCATCCTAGCAAG | + |
Preference number: 3 (lower is better) Translates to: RDLECVYRDQEP*QVPACSSHPSK Trigger: CTTGCTAGGATGGGAACTACAAGCAGGCACCTGGCAAGGTTCTTGGTCCCTGTAAACACATTCGAGGTCTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR-3UTR CAA 90 bp | GGCTTGGGGTTCTGCTTTTGTGCCCATCCATCCCTAACCAGTCTGCGTCTTCCTTGCCTCAACTATCACTaGGGTATCAACCCATCCTTG | + |
Preference number: 3 (lower is better) Translates to: GLGFCFCAHPSLTSLRLPCLNYH*GINPSL Trigger: CAAGGATGGGTTGATACCCAAGTGATAGTTGAGGCA...AGGAAGACGCAGACTGGTTAGGGATGGATGGGCACAAAAGCAGAACCCCAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR CCA 72 bp | TCATTACTCTGCCTTTGTGCTGCCTCAACTATCACTTaGGTATCAACCCATCCTTGTTGGGCTTCCCATGGT | + |
Preference number: 3 (lower is better) Translates to: SLLCLCAASTIT*VSTHPCWASHG Trigger: ACCATGGGAAGCCCAACAAGGATGGGTTGATACCCAAGTGATAGTTGAGGCAGCACAAAGGCAGAGTAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR CCA 72 bp | AAATATATCTTTAAAGCATTTGACACAGTGGTATTGTaGTGTATCTGGCATTGGATGTGGGCAGGGGGCCAT | + |
Preference number: 3 (lower is better) Translates to: KYIFKAFDTVVL*CIWHWMWAGGH Trigger: ATGGCCCCCTGCCCACATCCAATGCCAGATACACCACAATACCACTGTGTCAAATGCTTTAAAGATATATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR GCA 90 bp | GGCTGGGAGGAGGGTGGCAACATGGCTCCGCTGGGAGCTAGCTGCAGCTCCTTCGGCCGCTCCGGGAGCTaGGGAAGTTCACCTGTAGGC | + |
Preference number: 4 (lower is better) Translates to: GWEEGGNMAPLGASCSSFGRSGS*GSSPVG Trigger: GCCTACAGGTGAACTTCCGCAGCTCCCGGAGCGGCC...GAAGGAGCTGCAGCTAGCTCCCAGCGGAGCCATGTTGCCACCCTCCTCCCAGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR TCA 90 bp | TCCCCAGCTCCAAACCCCATGTCCTTGTGCCTGCAGGGAAACTCCGGGCTTGAGTGGAGAGCGAGCCGATaGCCCGGAAGCGAGAGGGGC | + |
Preference number: 4 (lower is better) Translates to: SPAPNPMSLCLQGNSGLEWRASR*PGSERG Trigger: GCCCCTCTCGCTTCCGGGTCATCGGCTCGCTCTCCA...CTCAAGCCCGGAGTTTCCCTGCAGGCACAAGGACATGGGGTTTGGAGCTGGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR GCA 90 bp | GGAAACTCCGGGCTTGAGAGAAGGGGTCTTTCTGAGGGCAGATGCCCTTCCCGCCTGGATGCCCAGGGCTaGCAGGCAGGCCACCAACCC | + |
Preference number: 4 (lower is better) Translates to: GNSGLERRGLSEGRCPSRLDAQG*QAGHQP Trigger: GGGTTGGTGGCCTGCCTGGCAGCCCTGGGCATCCAG...GCGGGAAGGGCATCTGCCCTCAGAAAGACCCCTTCTCTCAAGCCCGGAGTTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CCA 90 bp | GGGCTTGGGGTTCTGCTTTTGTGCCCATCCATCCCTAACCAGTCTGCGTCTTCCGCTGCCCAGCACCTCTaGCCGCTCCGGGAGCTGCGG | + |
Preference number: 4 (lower is better) Translates to: GLGVLLLCPSIPNQSASSAAQHL*PLRELR Trigger: CCGCAGCTCCCGGAGCGGCCAGAGGTGCTGGGCAGC...GGAAGACGCAGACTGGTTAGGGATGGATGGGCACAAAAGCAGAACCCCAAGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR TCA 90 bp | GGCTGGGAGGAGGGTGGCAACATGGCTCCGCTGGGAGCTAGCTGCAGCTCCTTCGATAGAGCTGGTCACTaGGACACAGGCCTCCGTCAG | + |
Preference number: 4 (lower is better) Translates to: GWEEGGNMAPLGASCSSFDRAGH*DTGLRQ Trigger: CTGACGGAGGCCTGTGTCTCAGTGACCAGCTCTATC...GAAGGAGCTGCAGCTAGCTCCCAGCGGAGCCATGTTGCCACCCTCCTCCCAGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR TCA 90 bp | GGGCTTGGGGTTCTGCTTTTGTGCCCATCCATCCCTAACCAGTCTGCGTCTTCCGCACGGGGTTGGCCTTaGTCCAGCCCCCGCAGGCGT | + |
Preference number: 4 (lower is better) Translates to: GLGVLLLCPSIPNQSASSARGWP*SSPRRR Trigger: ACGCCTGCGGGGGCTGGATCAAGGCCAACCCCGTGC...GGAAGACGCAGACTGGTTAGGGATGGATGGGCACAAAAGCAGAACCCCAAGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR TCA 90 bp | TGGAATGGCTGTCCTGTAGGCAGGTTGGGGTGGTACCCTGGGGCTTCTGGGAATGAAGGTTCCCCAGCGTaGGTGGCCATCGGGCACGGG | + |
Preference number: 4 (lower is better) Translates to: WNGCPVGRLGWYPGASGNEGSPA*VAIGHG Trigger: CCCGTGCCCGATGGCCACTCACGCTGGGGAACCTTC...ATTCCCAGAAGCCCCAGGGTACCACCCCAACCTGCCTACAGGACAGCCATTCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CCA 90 bp | CTTGGGGGCTCCACTGGGAAAGCAAGCCAAATGCTGCCTCCTAGTGGGGCTCAGGTTCCCCAGCGTGAGTaGCCATCGGGCACGGGGTTG | + |
Preference number: 4 (lower is better) Translates to: LGGSTGKASQMLPPSGAQVPQRE*PSGTGL Trigger: CAACCCCGTGCCCGATGGCCACTCACGCTGGGGAAC...CTGAGCCCCACTAGGAGGCAGCATTTGGCTTGCTTTCCCAGTGGAGCCCCCAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CCA 90 bp | GAGAAGGTCACGCCCATAACCAGGCCCTTCAGCTGCTCACCCCCTCTGCCTGGGTCCCTGCGCTTCTCCTaGGGGATGGTGATGTTGGCC | + |
Preference number: 4 (lower is better) Translates to: EKVTPITRPFSCSPPLPGSLRFS*GMVMLA Trigger: GGCCAACATCACCATCCCCCAGGAGAAGCGCAGGGA...CCCAGGCAGAGGGGGTGAGCAGCTGAAGGGCCTGGTTATGGGCGTGACCTTCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR TCA 90 bp | TGGAATGGCTGTCCTGTAGGCAGGTTGGGGTGGTACCCTGGGGCTTCTGGGAATCCCCGCAGGCGTAGCTaGAGAAGTCCTGGCACGGGT | + |
Preference number: 4 (lower is better) Translates to: WNGCPVGRLGWYPGASGNPRRRS*RSPGTG Trigger: ACCCGTGCCAGGACTTCTTCAGCTACGCCTGCGGGG...ATTCCCAGAAGCCCCAGGGTACCACCCCAACCTGCCTACAGGACAGCCATTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR TCA 90 bp | TCCCCAGCTCCAAACCCCATGTCCTTGTGCCTGCAGGGAAACTCCGGGCTTGAGTCTCCTGGGGGATGGTaGTGTTGGCCAGCGCCGTCT | + |
Preference number: 4 (lower is better) Translates to: SPAPNPMSLCLQGNSGLESPGGW*CWPAPS Trigger: AGACGGCGCTGGCCAACATCACCATCCCCCAGGAGA...CTCAAGCCCGGAGTTTCCCTGCAGGCACAAGGACATGGGGTTTGGAGCTGGGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR TCA 90 bp | TGGAATGGCTGTCCTGTAGGCAGGTTGGGGTGGTACCCTGGGGCTTCTGGGAATAGAGCTGGTTGCTGGTaGGACCCAGGGTGGGCAGCG | + |
Preference number: 4 (lower is better) Translates to: WNGCPVGRLGWYPGASGNRAGCW*DPGWAA Trigger: CGCTGCCCACCCTGGGTCTCACCAGCAACCAGCTCT...ATTCCCAGAAGCCCCAGGGTACCACCCCAACCTGCCTACAGGACAGCCATTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR GCA 90 bp | GGTACCCTGGGGCTTCTGGGAATGGGGCTATGGTGTTGGCTTCTAGTCAGGACACACCGAGGTCCGAGCTaGCCAGCACCTCTGGCCGCT | + |
Preference number: 4 (lower is better) Translates to: GTLGLLGMGLWCWLLVRTHRGPS*PAPLAA Trigger: AGCGGCCAGAGGTGCTGGGCAGCTCGGACCTCGGTG...TGTCCTGACTAGAAGCCAACACCATAGCCCCATTCCCAGAAGCCCCAGGGTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR GCA 90 bp | CCGGGCTTGAGAGAAGGGGTCTTTCTGAGGGCAGATGCCCTTCCCGCTACCGCCACCATGCACTCCGTCTaGTGCTTGAACGCCTCCACG | + |
Preference number: 4 (lower is better) Translates to: PGLREGVFLRADALPATATMHSV*CLNAST Trigger: CGTGGAGGCGTTCAAGCAGCAGACGGAGTGCATGGT...GGCGGTAGCGGGAAGGGCATCTGCCCTCAGAAAGACCCCTTCTCTCAAGCCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CCA 90 bp | GAGAAGGTCACGCCCATAACCAGGCCCTTCAGCTGCTCACCCCCTCTGCCTGGGCCTCTTCGTCCAGCGTaGCCCGCTTGTAGGTTGACA | + |
Preference number: 4 (lower is better) Translates to: EKVTPITRPFSCSPPLPGPLRPA*PACRLT Trigger: TGTCAACCTACAAGCGGGCCACGCTGGACGAAGAGG...CCCAGGCAGAGGGGGTGAGCAGCTGAAGGGCCTGGTTATGGGCGTGACCTTCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CCA 90 bp | CAAGAGCTTGCTCCCTGCAGGAGTCATGAGAACTGCGGTGAGCGCCACCTAGTGGCATCTGTGGCCGGATaGCATCCTCGTCCCCACCGC | + |
Preference number: 4 (lower is better) Translates to: QELAPCRSHENCGERHLVASVAG*HPRPHR Trigger: GCGGTGGGGACGAGGATGCCATCCGGCCACAGATGC...CACTAGGTGGCGCTCACCGCAGTTCTCATGACTCCTGCAGGGAGCAAGCTCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR CAA 72 bp | TGTCAGTGTGAGGCCCAGGGCTGGCAAGCCACCAGCTaGACACATCCAAAGGCCCGCCTAGCATCACGCACC | + |
Preference number: 4 (lower is better) Translates to: CQCEAQGWQATS*THPKARLASRT Trigger: GGTGCGTGATGCTAGGCGGGCCTTTGGATGTGTCAAGCTGGTGGCTTGCCAGCCCTGGGCCTCACACTGACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR CAA 72 bp | GAAAGGGCAGATGATCCAGACCCAGAAGGTCCCCCTTaGTGTGGCAGGGCACGGCTCCAGCACCTTCCTGCC | + |
Preference number: 4 (lower is better) Translates to: ERADDPDPEGPP*CGRARLQHLPA Trigger: GGCAGGAAGGTGCTGGAGCCGTGCCCTGCCACACAAAGGGGGACCTTCTGGGTCTGGATCATCTGCCCTTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR TCA 90 bp | CTTGGGGGCTCCACTGGGAAAGCAAGCCAAATGCTGCCTCCTAGTGGGGCTCAGTGGCCCAGGGTCCTGTaGTATTCCAGCCTCCCAGCT | + |
Preference number: 4 (lower is better) Translates to: LGGSTGKASQMLPPSGAQWPRVL*YSSLPA Trigger: AGCTGGGAGGCTGGAATATCACAGGACCCTGGGCCA...CTGAGCCCCACTAGGAGGCAGCATTTGGCTTGCTTTCCCAGTGGAGCCCCCAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR GCA 90 bp | GGCTGGGAGGAGGGTGGCAACATGGCTCCGCTGGGAGCTAGCTGCAGCTCCTTCAAATCCAGGATCTGCTaGATCTGTGGCCGGATGGCA | + |
Preference number: 4 (lower is better) Translates to: GWEEGGNMAPLGASCSSFKSRIC*ICGRMA Trigger: TGCCATCCGGCCACAGATGCAGCAGATCCTGGATTT...GAAGGAGCTGCAGCTAGCTCCCAGCGGAGCCATGTTGCCACCCTCCTCCCAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CCA 90 bp | GGCTGGGAGGAGGGTGGCAACATGGCTCCGCTGGGAGCTAGCTGCAGCTCCTTCAGTAAGCGTTCACCATaGGCGGCGTCATACTCCACT | + |
Preference number: 4 (lower is better) Translates to: GWEEGGNMAPLGASCSSFSKRSP*AASYST Trigger: AGTGGAGTATGACGCCGCCCATGGTGAACGCTTACT...GAAGGAGCTGCAGCTAGCTCCCAGCGGAGCCATGTTGCCACCCTCCTCCCAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CCA 90 bp | CTTGGGGGCTCCACTGGGAAAGCAAGCCAAATGCTGCCTCCTAGTGGGGCTCAGGTGATGAGGCCTTCGTaGGAGCTCTCAGGTGTGCGG | + |
Preference number: 4 (lower is better) Translates to: LGGSTGKASQMLPPSGAQVMRPS*ELSGVR Trigger: CCGCACACCTGAGAGCTCCCACGAAGGCCTCATCAC...CTGAGCCCCACTAGGAGGCAGCATTTGGCTTGCTTTCCCAGTGGAGCCCCCAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR TCA 90 bp | TCCCCAGCTCCAAACCCCATGTCCTTGTGCCTGCAGGGAAACTCCGGGCTTGAGGTTCCCAGAGGTTGCTaGAGGTTCCCCAGCGTGAGT | + |
Preference number: 4 (lower is better) Translates to: SPAPNPMSLCLQGNSGLEVPRGC*RFPSVS Trigger: ACTCACGCTGGGGAACCTTCAGCAACCTCTGGGAAC...CTCAAGCCCGGAGTTTCCCTGCAGGCACAAGGACATGGGGTTTGGAGCTGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR GCA 90 bp | CAAGAGCTTGCTCCCTGCAGGAGTCATGAGAACTGCGGTGAGCGCCACCTAGTGCCAGTTGATGGCAGGTaGCAAGGTCTGCAGCTCGGC | + |
Preference number: 4 (lower is better) Translates to: QELAPCRSHENCGERHLVPVDGR*QGLQLG Trigger: GCCGAGCTGCAGACCTTGGCACCTGCCATCAACTGG...CACTAGGTGGCGCTCACCGCAGTTCTCATGACTCCTGCAGGGAGCAAGCTCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR TCA 90 bp | CAAGAGCTTGCTCCCTGCAGGAGTCATGAGAACTGCGGTGAGCGCCACCTAGTGATCGCCCTCGGAGAGTaGGTCCACCAGATCCTCTTC | + |
Preference number: 4 (lower is better) Translates to: QELAPCRSHENCGERHLVIALGE*VHQILF Trigger: GAAGAGGATCTGGTGGACTCACTCTCCGAGGGCGAT...CACTAGGTGGCGCTCACCGCAGTTCTCATGACTCCTGCAGGGAGCAAGCTCTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR TCA 90 bp | CCGGGCTTGAGAGAAGGGGTCTTTCTGAGGGCAGATGCCCTTCCCGCTACCGCCGCAGCGAAAGTGTTCTaGGAACTCCTTGGAGTTGGA | + |
Preference number: 4 (lower is better) Translates to: PGLREGVFLRADALPATAAAKVF*ELLGVG Trigger: TCCAACTCCAAGGAGTTCTCAGAACACTTTCGCTGC...GGCGGTAGCGGGAAGGGCATCTGCCCTCAGAAAGACCCCTTCTCTCAAGCCCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR GCA 90 bp | GGAAACTCCGGGCTTGAGAGAAGGGGTCTTTCTGAGGGCAGATGCCCTTCCCGCAGGGTGGGCAGCGTCTaGTCAGCTCCGTTCTTCTTT | + |
Preference number: 4 (lower is better) Translates to: GNSGLERRGLSEGRCPSRRVGSV*SAPFFF Trigger: AAAGAAGAACGGAGCTGAGCAGACGCTGCCCACCCT...GCGGGAAGGGCATCTGCCCTCAGAAAGACCCCTTCTCTCAAGCCCGGAGTTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR GCA 90 bp | GGGCTTGGGGTTCTGCTTTTGTGCCCATCCATCCCTAACCAGTCTGCGTCTTCCGGGAGCTCTCAGGTGTaGGGACAGAGCACCAGACCT | + |
Preference number: 4 (lower is better) Translates to: GLGVLLLCPSIPNQSASSGSSQV*GQSTRP Trigger: AGGTCTGGTGCTCTGTCCGCACACCTGAGAGCTCCC...GGAAGACGCAGACTGGTTAGGGATGGATGGGCACAAAAGCAGAACCCCAAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR GCA 90 bp | GGGCTTGGGGTTCTGCTTTTGTGCCCATCCATCCCTAACCAGTCTGCGTCTTCCAAGCGAGAGGGGCTGTaGGGATCCGTGATGAGGCCT | + |
Preference number: 4 (lower is better) Translates to: GLGVLLLCPSIPNQSASSKREGL*GSVMRP Trigger: AGGCCTCATCACGGATCCGCACAGCCCCTCTCGCTT...GGAAGACGCAGACTGGTTAGGGATGGATGGGCACAAAAGCAGAACCCCAAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CCA 90 bp | GTGGCAACATGGCTCCGCTGGGAGCTAGCTGCAGCTCCTTCCCTTTTTCTGTCCGTTCTTGTCTGGTACTaGATGCCCAGGGCTGCCAGG | + |
Preference number: 4 (lower is better) Translates to: VATWLRWELAAAPSLFLSVLVWY*MPRAAR Trigger: CCTGGCAGCCCTGGGCATCCAGTACCAGACAAGAAC...GGACAGAAAAAGGGAAGGAGCTGCAGCTAGCTCCCAGCGGAGCCATGTTGCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CCA 90 bp | TCCCCAGCTCCAAACCCCATGTCCTTGTGCCTGCAGGGAAACTCCGGGCTTGAGCTGCCTCGCTCACACTaGCCGTGGCATTTTCCAGTA | + |
Preference number: 4 (lower is better) Translates to: SPAPNPMSLCLQGNSGLELPRSH*PWHFPV Trigger: TACTGGAAAATGCCACGGCCAGTGTGAGCGAGGCAG...CTCAAGCCCGGAGTTTCCCTGCAGGCACAAGGACATGGGGTTTGGAGCTGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CCA 90 bp | GGGCTTGGGGTTCTGCTTTTGTGCCCATCCATCCCTAACCAGTCTGCGTCTTCCGCTCCATCAGGGGCTTaGCCCGAAGCTCCTCAATCC | + |
Preference number: 4 (lower is better) Translates to: GLGVLLLCPSIPNQSASSAPSGA*PEAPQS Trigger: GGATTGAGGAGCTTCGGGCCAAGCCCCTGATGGAGC...GGAAGACGCAGACTGGTTAGGGATGGATGGGCACAAAAGCAGAACCCCAAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CCA 90 bp | GGCTGGGAGGAGGGTGGCAACATGGCTCCGCTGGGAGCTAGCTGCAGCTCCTTCGTCGTAGACCACGATTaGCTCAGACTCATTGATCTC | + |
Preference number: 4 (lower is better) Translates to: GWEEGGNMAPLGASCSSFVVDHD*LRLIDL Trigger: GAGATCAATGAGTCTGAGCCAATCGTGGTCTACGAC...GAAGGAGCTGCAGCTAGCTCCCAGCGGAGCCATGTTGCCACCCTCCTCCCAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CCA 90 bp | GGCTGGGAGGAGGGTGGCAACATGGCTCCGCTGGGAGCTAGCTGCAGCTCCTTCCGAAGTTCAAGGCGTTaGGTGAAGAGCGGGTATAAA | + |
Preference number: 4 (lower is better) Translates to: GWEEGGNMAPLGASCSSFRSSRR*VKSGYK Trigger: TTTATACCCGCTCTTCACCCAACGCCTTGAACTTCG...GAAGGAGCTGCAGCTAGCTCCCAGCGGAGCCATGTTGCCACCCTCCTCCCAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR TCA 90 bp | GGAAACTCCGGGCTTGAGAGAAGGGGTCTTTCTGAGGGCAGATGCCCTTCCCGCGAAAGGGTAACCAGTTaGTGGCAGGTGCCAAGGTCT | + |
Preference number: 4 (lower is better) Translates to: GNSGLERRGLSEGRCPSRERVTS*WQVPRS Trigger: AGACCTTGGCACCTGCCATCAACTGGTTACCCTTTC...GCGGGAAGGGCATCTGCCCTCAGAAAGACCCCTTCTCTCAAGCCCGGAGTTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR TCA 90 bp | CCGGGCTTGAGAGAAGGGGTCTTTCTGAGGGCAGATGCCCTTCCCGCTACCGCCAGCTGTGACCCTCCATaGGAAGTTGAAAAAGCGCAT | + |
Preference number: 4 (lower is better) Translates to: PGLREGVFLRADALPATASCDPP*EVEKAH Trigger: ATGCGCTTTTTCAACTTCTCATGGAGGGTCACAGCT...GGCGGTAGCGGGAAGGGCATCTGCCCTCAGAAAGACCCCTTCTCTCAAGCCCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR GCA 90 bp | TGGAATGGCTGTCCTGTAGGCAGGTTGGGGTGGTACCCTGGGGCTTCTGGGAATTTGGGCTTTTCTCTCTaGCTCGCTCACACTGGCCGT | + |
Preference number: 4 (lower is better) Translates to: WNGCPVGRLGWYPGASGNLGFSL*LAHTGR Trigger: ACGGCCAGTGTGAGCGAGGCAGAGAGAAAAGCCCAA...ATTCCCAGAAGCCCCAGGGTACCACCCCAACCTGCCTACAGGACAGCCATTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR GCA 90 bp | GGTACCCTGGGGCTTCTGGGAATGGGGCTATGGTGTTGGCTTCTAGTCAGGACAATGCACTCCGTCTGCTaGTTGAACGCCTCCACGGAC | + |
Preference number: 4 (lower is better) Translates to: GTLGLLGMGLWCWLLVRTMHSVC*LNASTD Trigger: GTCCGTGGAGGCGTTCAAGCAGCAGACGGAGTGCAT...TGTCCTGACTAGAAGCCAACACCATAGCCCCATTCCCAGAAGCCCCAGGGTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CCA 90 bp | TTGGGGGCTCCACTGGGAAAGCAAGCCAAATGCTGCCTCCTAGTGGGGCTCAGGCCGGACTGGTCCACCTaGATCACATTGCTGTTGGAA | + |
Preference number: 4 (lower is better) Translates to: LGAPLGKQAKCCLLVGLRPDWST*ITLLLE Trigger: TTCCAACAGCAATGTGATCCAGGTGGACCAGTCCGG...CCTGAGCCCCACTAGGAGGCAGCATTTGGCTTGCTTTCCCAGTGGAGCCCCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CCA 90 bp | CAAGAGCTTGCTCCCTGCAGGAGTCATGAGAACTGCGGTGAGCGCCACCTAGTGTCAGGTAATAGTCTCTaGAGGGCAAGCCAAGGCCGG | + |
Preference number: 4 (lower is better) Translates to: QELAPCRSHENCGERHLVSGNSL*RASQGR Trigger: CCGGCCTTGGCTTGCCCTCCAGAGACTATTACCTGA...CACTAGGTGGCGCTCACCGCAGTTCTCATGACTCCTGCAGGGAGCAAGCTCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CCA 90 bp | GGGCTTGGGGTTCTGCTTTTGTGCCCATCCATCCCTAACCAGTCTGCGTCTTCCGATCTGCTGCATCTGTaGCCGGATGGCATCCTCGTC | + |
Preference number: 4 (lower is better) Translates to: GLGVLLLCPSIPNQSASSDLLHL*PDGILV Trigger: GACGAGGATGCCATCCGGCCACAGATGCAGCAGATC...GGAAGACGCAGACTGGTTAGGGATGGATGGGCACAAAAGCAGAACCCCAAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CCA 90 bp | GGAAACTCCGGGCTTGAGAGAAGGGGTCTTTCTGAGGGCAGATGCCCTTCCCGCCATCCGCCTTCTCCTTaGCTGATCTCCGAGTCTCTT | + |
Preference number: 4 (lower is better) Translates to: GNSGLERRGLSEGRCPSRHPPSP*LISESL Trigger: AAGAGACTCGGAGATCAGCCAAGGAGAAGGCGGATG...GCGGGAAGGGCATCTGCCCTCAGAAAGACCCCTTCTCTCAAGCCCGGAGTTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CCA 90 bp | CTTGGGGGCTCCACTGGGAAAGCAAGCCAAATGCTGCCTCCTAGTGGGGCTCAGGGAGCTTTTCTGAGCTaGTCAGCTGTGACCCTCCAT | + |
Preference number: 4 (lower is better) Translates to: LGGSTGKASQMLPPSGAQGAFLS*SAVTLH Trigger: ATGGAGGGTCACAGCTGACCAGCTCAGAAAAGCTCC...CTGAGCCCCACTAGGAGGCAGCATTTGGCTTGCTTTCCCAGTGGAGCCCCCAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CCA 90 bp | TTGGGGGCTCCACTGGGAAAGCAAGCCAAATGCTGCCTCCTAGTGGGGCTCAGGGTTCTGAGAACTCCTTaGAGTTGGAGAGCGAGCCGA | + |
Preference number: 4 (lower is better) Translates to: LGAPLGKQAKCCLLVGLRVLRTP*SWRASR Trigger: TCGGCTCGCTCTCCAACTCCAAGGAGTTCTCAGAAC...CCTGAGCCCCACTAGGAGGCAGCATTTGGCTTGCTTTCCCAGTGGAGCCCCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR CAA 72 bp | ACCCCATGTCCTTGTGCCTGCAGGGAAACTCCGGGCTaGAGAGAAGGGGTCTTTCTGAGGGCAGATGCCCTT | + |
Preference number: 4 (lower is better) Translates to: TPCPCACRETPG*REGVFLRADAL Trigger: AAGGGCATCTGCCCTCAGAAAGACCCCTTCTCTCAAGCCCGGAGTTTCCCTGCAGGCACAAGGACATGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR TCA 90 bp | GTGTTGGCTTCTAGTCAGGACACTTGGGGGCTCCACTGGGAAAGCAAGCCAAATTTCTCGTCGGCGTCCTaGAAGCGCTGGTCCAGGAAG | + |
Preference number: 4 (lower is better) Translates to: VLASSQDTWGLHWESKPNFSSAS*KRWSRK Trigger: CTTCCTGGACCAGCGCTTTCAGGACGCCGACGAGAA...ATTTGGCTTGCTTTCCCAGTGGAGCCCCCAAGTGTCCTGACTAGAAGCCAACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR GCA 90 bp | GAGAAGGTCACGCCCATAACCAGGCCCTTCAGCTGCTCACCCCCTCTGCCTGGGGTCTTCTGCAAAGGTTaGTTTCACAAACATGGGTCC | + |
Preference number: 4 (lower is better) Translates to: EKVTPITRPFSCSPPLPGVFCKG*FHKHGS Trigger: GGACCCATGTTTGTGAAAGCAACCTTTGCAGAAGAC...CCCAGGCAGAGGGGGTGAGCAGCTGAAGGGCCTGGTTATGGGCGTGACCTTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CCA 90 bp | GGGCTTGGGGTTCTGCTTTTGTGCCCATCCATCCCTAACCAGTCTGCGTCTTCCGGCACGGGTCTACTGTaGGGTCCATGGAGTTTAGGA | + |
Preference number: 4 (lower is better) Translates to: GLGVLLLCPSIPNQSASSGTGLL*GPWSLG Trigger: TCCTAAACTCCATGGACCCCACAGTAGACCCGTGCC...GGAAGACGCAGACTGGTTAGGGATGGATGGGCACAAAAGCAGAACCCCAAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CCA 90 bp | GGAAACTCCGGGCTTGAGAGAAGGGGTCTTTCTGAGGGCAGATGCCCTTCCCGCCGATCTCGTTCTTGGTaGGCGAGTAGTAAGCGTTCA | + |
Preference number: 4 (lower is better) Translates to: GNSGLERRGLSEGRCPSRRSRSW*ASSKRS Trigger: TGAACGCTTACTACTCGCCCACCAAGAACGAGATCG...GCGGGAAGGGCATCTGCCCTCAGAAAGACCCCTTCTCTCAAGCCCGGAGTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR CAA 72 bp | TGTCCAGGATGCCGGAGCTTCACAGGGGGTCAAATCTaGGCTTCGAGTGGTGAGGCTCCATCCATCTTAGGC | + |
Preference number: 4 (lower is better) Translates to: CPGCRSFTGGQI*ASSGEAPSILG Trigger: GCCTAAGATGGATGGAGCCTCACCACTCGAAGCCAAGATTTGACCCCCTGTGAAGCTCCGGCATCCTGGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR CAA 72 bp | TCCCTGGAGCCCAATGGGGCTGGGAACATTCCAGTCTaGGCCTGCTCTGGCTACAGCATCCACCTCCAAAAA | + |
Preference number: 4 (lower is better) Translates to: SLEPNGAGNIPV*ACSGYSIHLQK Trigger: TTTTTGGAGGTGGATGCTGTAGCCAGAGCAGGCCAAGACTGGAATGTTCCCAGCCCCATTGGGCTCCAGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR TCA 90 bp | CAAGAGCTTGCTCCCTGCAGGAGTCATGAGAACTGCGGTGAGCGCCACCTAGTGTCTTGGAGTCCGCGCTaGCATAAACAGAGAAGAAGG | + |
Preference number: 4 (lower is better) Translates to: QELAPCRSHENCGERHLVSWSPR*HKQRRR Trigger: CCTTCTTCTCTGTTTATGTCAGCGCGGACTCCAAGA...CACTAGGTGGCGCTCACCGCAGTTCTCATGACTCCTGCAGGGAGCAAGCTCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR TCA 90 bp | TGGAATGGCTGTCCTGTAGGCAGGTTGGGGTGGTACCCTGGGGCTTCTGGGAATCCCTCCATGAGAAGTTaGAAAAGCGCATGGCGTTCT | + |
Preference number: 4 (lower is better) Translates to: WNGCPVGRLGWYPGASGNPSMRS*KSAWRS Trigger: AGAACGCCATGCGCTTTTTCAACTTCTCATGGAGGG...ATTCCCAGAAGCCCCAGGGTACCACCCCAACCTGCCTACAGGACAGCCATTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR GCA 90 bp | GTGGCAACATGGCTCCGCTGGGAGCTAGCTGCAGCTCCTTCCCTTTTTCTGTCCCGTTCACGCTGTAGTTaGTGTATTGCTGCACCATGC | + |
Preference number: 4 (lower is better) Translates to: VATWLRWELAAAPSLFLSRSRCS*CIAAPC Trigger: GCATGGTGCAGCAATACAGCAACTACAGCGTGAACG...GGACAGAAAAAGGGAAGGAGCTGCAGCTAGCTCCCAGCGGAGCCATGTTGCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CCA 90 bp | GGAAACTCCGGGCTTGAGAGAAGGGGTCTTTCTGAGGGCAGATGCCCTTCCCGCTGCTTGATGACAGCTTaGTTGTGTTCCCAGAGGTTG | + |
Preference number: 4 (lower is better) Translates to: GNSGLERRGLSEGRCPSRCLMTA*LCSQRL Trigger: CAACCTCTGGGAACACAACCAAGCTGTCATCAAGCA...GCGGGAAGGGCATCTGCCCTCAGAAAGACCCCTTCTCTCAAGCCCGGAGTTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CCA 90 bp | CAAGAGCTTGCTCCCTGCAGGAGTCATGAGAACTGCGGTGAGCGCCACCTAGTGACACGATCTCGTTCTTaGTGGGCGAGTAGTAAGCGT | + |
Preference number: 4 (lower is better) Translates to: QELAPCRSHENCGERHLVTRSRS*WASSKR Trigger: ACGCTTACTACTCGCCCACCAAGAACGAGATCGTGT...CACTAGGTGGCGCTCACCGCAGTTCTCATGACTCCTGCAGGGAGCAAGCTCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CCA 90 bp | GGGCTTGGGGTTCTGCTTTTGTGCCCATCCATCCCTAACCAGTCTGCGTCTTCCGGATCACATTGCTGTTaGAATTCTTGGAGTCCGCGC | + |
Preference number: 4 (lower is better) Translates to: GLGVLLLCPSIPNQSASSGSHCC*NSWSPR Trigger: GCGCGGACTCCAAGAATTCCAACAGCAATGTGATCC...GGAAGACGCAGACTGGTTAGGGATGGATGGGCACAAAAGCAGAACCCCAAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR CAA 72 bp | TTGGGTATCAACCCATCCTTGTTGGGCTTCCCATGGTaGGACTCCAGCGACAGGACAGGTAAGCTGAGAAGG | + |
Preference number: 4 (lower is better) Translates to: LGINPSLLGFPW*DSSDRTGKLRR Trigger: CCTTCTCAGCTTACCTGTCCTGTCGCTGGAGTCCAACCATGGGAAGCCCAACAAGGATGGGTTGATACCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR CAA 72 bp | GGGGTGAGGGGAATCCCTCTATCTACAAGGACTGAATaGATTCAATGTGCGTGCCACGGGTGGCTGAAAGCC | + |
Preference number: 4 (lower is better) Translates to: GVRGIPLSTRTE*IQCACHGWLKA Trigger: GGCTTTCAGCCACCCGTGGCACGCACATTGAATCAATTCAGTCCTTGTAGATAGAGGGATTCCCCTCACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR CAA 72 bp | GCACTACTAGGCTTCTCCCACACATATCACAAGAGCTaGCTCCCTGCAGGAGTCATGAGAACTGCGGTGAGC | + |
Preference number: 4 (lower is better) Translates to: ALLGFSHTYHKS*LPAGVMRTAVS Trigger: GCTCACCGCAGTTCTCATGACTCCTGCAGGGAGCAAGCTCTTGTGATATGTGTGGGAGAAGCCTAGTAGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR GCA 90 bp | GGAAACTCCGGGCTTGAGAGAAGGGGTCTTTCTGAGGGCAGATGCCCTTCCCGCGTAGAGATCAGGAACTaGTGTGTAGTCATTGAAGAC | + |
Preference number: 4 (lower is better) Translates to: GNSGLERRGLSEGRCPSRVEIRN*CVVIED Trigger: GTCTTCAATGACTACACAGCAGTTCCTGATCTCTAC...GCGGGAAGGGCATCTGCCCTCAGAAAGACCCCTTCTCTCAAGCCCGGAGTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CCA 90 bp | GGCTTGGGGTTCTGCTTTTGTGCCCATCCATCCCTAACCAGTCTGCGTCTTCCTAGAGCGGGTATAAAATaGCGCCTGCAGTATTCCAGC | + |
Preference number: 4 (lower is better) Translates to: GLGFCFCAHPSLTSLRLPRAGIK*RLQYSS Trigger: GCTGGAATACTGCAGGCGCCATTTTATACCCGCTCT...AGGAAGACGCAGACTGGTTAGGGATGGATGGGCACAAAAGCAGAACCCCAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR TCA 90 bp | GTGTTGGCTTCTAGTCAGGACACTTGGGGGCTCCACTGGGAAAGCAAGCCAAATGGCGTCATACTCCACTaGTCTCTGTTGGGAGCTTTT | + |
Preference number: 4 (lower is better) Translates to: VLASSQDTWGLHWESKPNGVILH*SLLGAF Trigger: AAAAGCTCCCAACAGAGATCAGTGGAGTATGACGCC...ATTTGGCTTGCTTTCCCAGTGGAGCCCCCAAGTGTCCTGACTAGAAGCCAACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR GCA 90 bp | GGCTTGGGGTTCTGCTTTTGTGCCCATCCATCCCTAACCAGTCTGCGTCTTCCTGGAAGGAGCTTGTTTTaGGTACCAGGTTCCACATCA | + |
Preference number: 4 (lower is better) Translates to: GLGFCFCAHPSLTSLRLPGRSLF*VPGSTS Trigger: TGATGTGGAACCTGGTACGCAAAACAAGCTCCTTCC...AGGAAGACGCAGACTGGTTAGGGATGGATGGGCACAAAAGCAGAACCCCAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR TCA 90 bp | CAGAGGATCAGTGAAGCTGACCACTTCAGGATGTCAGAATTGCTACAGAGAGGCAACAGAGAAGAAGGGTaGGGTGCGGTAGTGAGCTGT | + |
Preference number: 4 (lower is better) Translates to: QRISEADHFRMSELLQRGNREEG*GAVVSC Trigger: ACAGCTCACTACCGCACCTCACCCTTCTTCTCTGTT...GCCTCTCTGTAGCAATTCTGACATCCTGAAGTGGTCAGCTTCACTGATCCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR TCA 90 bp | GTGTTGGCTTCTAGTCAGGACACTTGGGGGCTCCACTGGGAAAGCAAGCCAAATCTGCTGTGTAGTCATTaGAGACTTTGTCCAGCTCCT | + |
Preference number: 4 (lower is better) Translates to: VLASSQDTWGLHWESKPNLLCSH*RLCPAP Trigger: AGGAGCTGGACAAAGTCTTCAATGACTACACAGCAG...ATTTGGCTTGCTTTCCCAGTGGAGCCCCCAAGTGTCCTGACTAGAAGCCAACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR GCA 90 bp | GGCTTGGGGTTCTGCTTTTGTGCCCATCCATCCCTAACCAGTCTGCGTCTTCCTCCACCTGGATCACATTaGTGTTGGAATTCTTGGAGT | + |
Preference number: 4 (lower is better) Translates to: GLGFCFCAHPSLTSLRLPPPGSH*CWNSWS Trigger: ACTCCAAGAATTCCAACAGCAATGTGATCCAGGTGG...AGGAAGACGCAGACTGGTTAGGGATGGATGGGCACAAAAGCAGAACCCCAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR GCA 90 bp | GGGCTTGGGGTTCTGCTTTTGTGCCCATCCATCCCTAACCAGTCTGCGTCTTCCATTCTTACTGTCTTCTaGAAAGGTTGCTTTCACAAA | + |
Preference number: 4 (lower is better) Translates to: GLGVLLLCPSIPNQSASSILTVF*KGCFHK Trigger: TTTGTGAAAGCAACCTTTGCAGAAGACAGTAAGAAT...GGAAGACGCAGACTGGTTAGGGATGGATGGGCACAAAAGCAGAACCCCAAGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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3UTR CAA 72 bp | CAAAAATATATCTTTAAAGCATTTGACACAGTGGTATaGTGGTGTATCTGGCATTGGATGTGGGCAGGGGGC | + |
Preference number: 4 (lower is better) Translates to: QKYIFKAFDTVV*WCIWHWMWAGG Trigger: GCCCCCTGCCCACATCCAATGCCAGATACACCACAATACCACTGTGTCAAATGCTTTAAAGATATATTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CAA 90 bp | CCGGGCTTGAGAGAAGGGGTCTTTCTGAGGGCAGATGCCCTTCCCGCTACCGCCGGCACGGGGTTGGCCTaGATCCAGCCCCCGCAGGCG | + |
Preference number: 5 (lower is better) Translates to: PGLREGVFLRADALPATAGTGLA*IQPPQA Trigger: CGCCTGCGGGGGCTGGATCAAGGCCAACCCCGTGCC...GGCGGTAGCGGGAAGGGCATCTGCCCTCAGAAAGACCCCTTCTCTCAAGCCCGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS GCA 90 bp | CCACCGAGGTCCGAGCTGCCCAGCACCTCTGGCCGCTCCGGGAGCTaGGGAAGTTCACCTGTAGGCCATTGGGGTACACATCGCCCTCGG | + |
Preference number: 5 (lower is better) Translates to: PPRSELPSTSGRSGS*GSSPVGHWGTHRPR Trigger: CCGAGGGCGATGTGTACCCCAATGGCCTACAGGTGAACTTCCGCAGCTCCCGGAGCGGCCAGAGGTGCTGGGCAGCTCGGACCTCGGTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102518.10 ENSMUST00000151110.4 |
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CDS CCA 90 bp | ACCACCAGCCGCTTCTCCACCGAGGTCCGAGCTGCCCAGCACCTCTaGCCGCTCCGGGAGCTGCGGAAGTTCACCTGTAGGCCATTGGGG | + |
Preference number: 5 (lower is better) Translates to: TTSRFSTEVRAAQHL*PLRELRKFTCRPLG Trigger: CCCCAATGGCCTACAGGTGAACTTCCGCAGCTCCCGGAGCGGCCAGAGGTGCTGGGCAGCTCGGACCTCGGTGGAGAAGCGGCTGGTGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102518.10 ENSMUST00000151110.4 |
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CDS GCA 90 bp | TGTCTGGTACTGGATGCCCAGGGCTGCCAGGCAGGCCACCAACCCTaGCGCCAGAAGCGTCACCAGCACCACCAGCCGCTTCTCCACCGA | + |
Preference number: 5 (lower is better) Translates to: CLVLDAQGCQAGHQP*RQKRHQHHQPLLHR Trigger: TCGGTGGAGAAGCGGCTGGTGGTGCTGGTGACGCTTCTGGCGGCAGGGTTGGTGGCCTGCCTGGCAGCCCTGGGCATCCAGTACCAGACA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102518.10 ENSMUST00000151110.4 |
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CDS CCA 90 bp | CATCGCCCTCGGAGAGTGAGTCCACCAGATCCTCTTCGTCCAGCGTaGCCCGCTTGTAGGTTGACATCCCCAGAGCGGCCAGCGCGGCGG | + |
Preference number: 5 (lower is better) Translates to: HRPRRVSPPDPLRPA*PACRLTSPERPARR Trigger: CCGCCGCGCTGGCCGCTCTGGGGATGTCAACCTACAAGCGGGCCACGCTGGACGAAGAGGATCTGGTGGACTCACTCTCCGAGGGCGATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151110.4 |
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CDS GCA 90 bp | CAGACATACCGGAGGCGTTCTTGTCTGGTACTGGATGCCCAGGGCTaGCAGGCAGGCCACCAACCCTGCCGCCAGAAGCGTCACCAGCAC | + |
Preference number: 5 (lower is better) Translates to: QTYRRRSCLVLDAQG*QAGHQPCRQKRHQH Trigger: GTGCTGGTGACGCTTCTGGCGGCAGGGTTGGTGGCCTGCCTGGCAGCCCTGGGCATCCAGTACCAGACAAGAACGCCTCCGGTATGTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102518.10 ENSMUST00000151110.4 |
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CDS-3UTR CAA 90 bp | CAAGAGCTTGCTCCCTGCAGGAGTCATGAGAACTGCGGTGAGCGCCACCTAGTGCCATCGGGCACGGGGTaGGCCTTGATCCAGCCCCCG | + |
Preference number: 5 (lower is better) Translates to: QELAPCRSHENCGERHLVPSGTG*ALIQPP Trigger: CGGGGGCTGGATCAAGGCCAACCCCGTGCCCGATGG...CACTAGGTGGCGCTCACCGCAGTTCTCATGACTCCTGCAGGGAGCAAGCTCTTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS CCA 90 bp | ACTGAGACACAGGCCTCCGTCAGACATACCGGAGGCGTTCTTGTCTaGTACTGGATGCCCAGGGCTGCCAGGCAGGCCACCAACCCTGCC | + |
Preference number: 5 (lower is better) Translates to: TETQASVRHTGGVLV*YWMPRAARQATNPA Trigger: GGCAGGGTTGGTGGCCTGCCTGGCAGCCCTGGGCATCCAGTACCAGACAAGAACGCCTCCGGTATGTCTGACGGAGGCCTGTGTCTCAGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102518.10 ENSMUST00000151110.4 |
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CDS-3UTR CAA 90 bp | GGCTGGGAGGAGGGTGGCAACATGGCTCCGCTGGGAGCTAGCTGCAGCTCCTTCTTGTGTTCCCAGAGGTaGCTGAAGGTTCCCCAGCGT | + |
Preference number: 5 (lower is better) Translates to: GWEEGGNMAPLGASCSSFLCSQR*LKVPQR Trigger: ACGCTGGGGAACCTTCAGCAACCTCTGGGAACACAA...GAAGGAGCTGCAGCTAGCTCCCAGCGGAGCCATGTTGCCACCCTCCTCCCAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CAA 90 bp | CCGGGCTTGAGAGAAGGGGTCTTTCTGAGGGCAGATGCCCTTCCCGCTACCGCCCGCACGGTAGTACACTaGGGCTTTTCTCTCTGCCTC | + |
Preference number: 5 (lower is better) Translates to: PGLREGVFLRADALPATARTVVH*GFSLCL Trigger: GAGGCAGAGAGAAAAGCCCAAGTGTACTACCGTGCG...GGCGGTAGCGGGAAGGGCATCTGCCCTCAGAAAGACCCCTTCTCTCAAGCCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CAA 90 bp | GAGAAGGTCACGCCCATAACCAGGCCCTTCAGCTGCTCACCCCCTCTGCCTGGGGGTCCAGGAAGGAGCTaGTTTTGCGTACCAGGTTCC | + |
Preference number: 5 (lower is better) Translates to: EKVTPITRPFSCSPPLPGGPGRS*FCVPGS Trigger: GGAACCTGGTACGCAAAACAAGCTCCTTCCTGGACC...CCCAGGCAGAGGGGGTGAGCAGCTGAAGGGCCTGGTTATGGGCGTGACCTTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CAA 90 bp | CCGGGCTTGAGAGAAGGGGTCTTTCTGAGGGCAGATGCCCTTCCCGCTACCGCCAGGAAGGAGCTTGTTTaGCGTACCAGGTTCCACATC | + |
Preference number: 5 (lower is better) Translates to: PGLREGVFLRADALPATARKELV*RTRFHI Trigger: GATGTGGAACCTGGTACGCAAAACAAGCTCCTTCCT...GGCGGTAGCGGGAAGGGCATCTGCCCTCAGAAAGACCCCTTCTCTCAAGCCCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS TCA 90 bp | CCACCTGCAGTGTGTCCTGGAAGTTGTCCTTGGCCCAGGGTCCTGTaGTATTCCAGCCTCCCAGCTTCTCAATCAGCTCCATCAGGGGCT | + |
Preference number: 5 (lower is better) Translates to: PPAVCPGSCPWPRVL*YSSLPASQSAPSGA Trigger: AGCCCCTGATGGAGCTGATTGAGAAGCTGGGAGGCTGGAATATCACAGGACCCTGGGCCAAGGACAACTTCCAGGACACACTGCAGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS TCA 90 bp | CGCTGTAGTTGCTGTATTGCTGCACCATGCACTCCGTCTGCTGCTTaGACGCCTCCACGGACGAGTTCTTCCACCAGGGTCGAAGGTTCC | + |
Preference number: 5 (lower is better) Translates to: RCSCCIAAPCTPSAA*TPPRTSSSTRVEGS Trigger: GGAACCTTCGACCCTGGTGGAAGAACTCGTCCGTGGAGGCGTTCAAGCAGCAGACGGAGTGCATGGTGCAGCAATACAGCAACTACAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CAA 90 bp | CCGGGCTTGAGAGAAGGGGTCTTTCTGAGGGCAGATGCCCTTCCCGCTACCGCCATGCTTGATGACAGCTaGGTTGTGTTCCCAGAGGTT | + |
Preference number: 5 (lower is better) Translates to: PGLREGVFLRADALPATAMLDDS*VVFPEV Trigger: AACCTCTGGGAACACAACCAAGCTGTCATCAAGCAT...GGCGGTAGCGGGAAGGGCATCTGCCCTCAGAAAGACCCCTTCTCTCAAGCCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CAA 90 bp | GTGGCAACATGGCTCCGCTGGGAGCTAGCTGCAGCTCCTTCCCTTTTTCTGTCCTCCTGGAAGTTGTCCTaGGCCCAGGGTCCTGTGATA | + |
Preference number: 5 (lower is better) Translates to: VATWLRWELAAAPSLFLSSWKLS*AQGPVI Trigger: TATCACAGGACCCTGGGCCAAGGACAACTTCCAGGA...GGACAGAAAAAGGGAAGGAGCTGCAGCTAGCTCCCAGCGGAGCCATGTTGCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CAA 90 bp | GGGCTTGGGGTTCTGCTTTTGTGCCCATCCATCCCTAACCAGTCTGCGTCTTCCAGTGTGTCCTGGAAGTaGTCCTTGGCCCAGGGTCCT | + |
Preference number: 5 (lower is better) Translates to: GLGVLLLCPSIPNQSASSSVSWK*SLAQGP Trigger: AGGACCCTGGGCCAAGGACAACTTCCAGGACACACT...GGAAGACGCAGACTGGTTAGGGATGGATGGGCACAAAAGCAGAACCCCAAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CAA 90 bp | GGGCTTGGGGTTCTGCTTTTGTGCCCATCCATCCCTAACCAGTCTGCGTCTTCCTGGGGGATGGTGATGTaGGCCAGCGCCGTCTCAAAA | + |
Preference number: 5 (lower is better) Translates to: GLGVLLLCPSIPNQSASSWGMVM*ASAVSK Trigger: TTTTGAGACGGCGCTGGCCAACATCACCATCCCCCA...GGAAGACGCAGACTGGTTAGGGATGGATGGGCACAAAAGCAGAACCCCAAGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CAA 90 bp | GGAAACTCCGGGCTTGAGAGAAGGGGTCTTTCTGAGGGCAGATGCCCTTCCCGCAGAAAGGGTAACCAGTaGATGGCAGGTGCCAAGGTC | + |
Preference number: 5 (lower is better) Translates to: GNSGLERRGLSEGRCPSRRKGNQ*MAGAKV Trigger: GACCTTGGCACCTGCCATCAACTGGTTACCCTTTCT...GCGGGAAGGGCATCTGCCCTCAGAAAGACCCCTTCTCTCAAGCCCGGAGTTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CAA 90 bp | TTGGGGGCTCCACTGGGAAAGCAAGCCAAATGCTGCCTCCTAGTGGGGCTCAGGAGGGCAAAGCCCAGGTaGTTTTCCGTGTCACTCACA | + |
Preference number: 5 (lower is better) Translates to: LGAPLGKQAKCCLLVGLRRAKPR*FSVSLT Trigger: TGTGAGTGACACGGAAAACAACCTGGGCTTTGCCCT...CCTGAGCCCCACTAGGAGGCAGCATTTGGCTTGCTTTCCCAGTGGAGCCCCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CAA 90 bp | GTGTTGGCTTCTAGTCAGGACACTTGGGGGCTCCACTGGGAAAGCAAGCCAAATCACTCCGTCTGCTGCTaGAACGCCTCCACGGACGAG | + |
Preference number: 5 (lower is better) Translates to: VLASSQDTWGLHWESKPNHSVCC*NASTDE Trigger: CTCGTCCGTGGAGGCGTTCAAGCAGCAGACGGAGTG...ATTTGGCTTGCTTTCCCAGTGGAGCCCCCAAGTGTCCTGACTAGAAGCCAACAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CAA 90 bp | GGTACCCTGGGGCTTCTGGGAATGGGGCTATGGTGTTGGCTTCTAGTCAGGACAGAGAACTCCTTGGAGTaGGAGAGCGAGCCGATGACC | + |
Preference number: 5 (lower is better) Translates to: GTLGLLGMGLWCWLLVRTENSLE*ESEPMT Trigger: GGTCATCGGCTCGCTCTCCAACTCCAAGGAGTTCTC...TGTCCTGACTAGAAGCCAACACCATAGCCCCATTCCCAGAAGCCCCAGGGTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CAA 90 bp | TGGAATGGCTGTCCTGTAGGCAGGTTGGGGTGGTACCCTGGGGCTTCTGGGAATTGTTCTGAGAACTCCTaGGAGTTGGAGAGCGAGCCG | + |
Preference number: 5 (lower is better) Translates to: WNGCPVGRLGWYPGASGNCSENS*ELESEP Trigger: CGGCTCGCTCTCCAACTCCAAGGAGTTCTCAGAACA...ATTCCCAGAAGCCCCAGGGTACCACCCCAACCTGCCTACAGGACAGCCATTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS CCA 90 bp | GCTCGTGGCCCACTACGACACCAATGCCACCGAAGTTCAAGGCGTTaGGTGAAGAGCGGGTATAAAATGGCGCCTGCAGTATTCCAGCTG | + |
Preference number: 5 (lower is better) Translates to: ARGPLRHQCHRSSRR*VKSGYKMAPAVFQL Trigger: CAGCTGGAATACTGCAGGCGCCATTTTATACCCGCTCTTCACCCAACGCCTTGAACTTCGGTGGCATTGGTGTCGTAGTGGGCCACGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CAA 90 bp | GGTACCCTGGGGCTTCTGGGAATGGGGCTATGGTGTTGGCTTCTAGTCAGGACAATACCGGAGGCGTTCTaGTCTGGTACTGGATGCCCA | + |
Preference number: 5 (lower is better) Translates to: GTLGLLGMGLWCWLLVRTIPEAF*SGTGCP Trigger: TGGGCATCCAGTACCAGACAAGAACGCCTCCGGTAT...TGTCCTGACTAGAAGCCAACACCATAGCCCCATTCCCAGAAGCCCCAGGGTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CAA 90 bp | TTGGGGGCTCCACTGGGAAAGCAAGCCAAATGCTGCCTCCTAGTGGGGCTCAGGTTGATGACAGCTTGGTaGTGTTCCCAGAGGTTGCTG | + |
Preference number: 5 (lower is better) Translates to: LGAPLGKQAKCCLLVGLRLMTAW*CSQRLL Trigger: CAGCAACCTCTGGGAACACAACCAAGCTGTCATCAA...CCTGAGCCCCACTAGGAGGCAGCATTTGGCTTGCTTTCCCAGTGGAGCCCCCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CAA 90 bp | GAGAAGGTCACGCCCATAACCAGGCCCTTCAGCTGCTCACCCCCTCTGCCTGGGTCCTCAAACGCCTTCTaGATCTCCATGATGATCTCA | + |
Preference number: 5 (lower is better) Translates to: EKVTPITRPFSCSPPLPGSSNAF*ISMMIS Trigger: TGAGATCATCATGGAGATCAAGAAGGCGTTTGAGGA...CCCAGGCAGAGGGGGTGAGCAGCTGAAGGGCCTGGTTATGGGCGTGACCTTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CAA 90 bp | GGAAACTCCGGGCTTGAGAGAAGGGGTCTTTCTGAGGGCAGATGCCCTTCCCGCACTTTGTCCAGCTCCTaGGGGTCCATGATGAAGTTG | + |
Preference number: 5 (lower is better) Translates to: GNSGLERRGLSEGRCPSRTLSSS*GSMMKL Trigger: CAACTTCATCATGGACCCCAAGGAGCTGGACAAAGT...GCGGGAAGGGCATCTGCCCTCAGAAAGACCCCTTCTCTCAAGCCCGGAGTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CAA 90 bp | GTGGCAACATGGCTCCGCTGGGAGCTAGCTGCAGCTCCTTCCCTTTTTCTGTCCGCTGTAGTTGCTGTATaGCTGCACCATGCACTCCGT | + |
Preference number: 5 (lower is better) Translates to: VATWLRWELAAAPSLFLSAVVAV*LHHALR Trigger: ACGGAGTGCATGGTGCAGCAATACAGCAACTACAGC...GGACAGAAAAAGGGAAGGAGCTGCAGCTAGCTCCCAGCGGAGCCATGTTGCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CAA 90 bp | GGAAACTCCGGGCTTGAGAGAAGGGGTCTTTCTGAGGGCAGATGCCCTTCCCGCAGACATTTGTCGGTGTaGTTGATGAGGGTGGAGACT | + |
Preference number: 5 (lower is better) Translates to: GNSGLERRGLSEGRCPSRRHLSV*LMRVET Trigger: AGTCTCCACCCTCATCAACAACACCGACAAATGTCT...GCGGGAAGGGCATCTGCCCTCAGAAAGACCCCTTCTCTCAAGCCCGGAGTTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CAA 90 bp | GTGGCAACATGGCTCCGCTGGGAGCTAGCTGCAGCTCCTTCCCTTTTTCTGTCCACCCTCCATGAGAAGTaGAAAAAGCGCATGGCGTTC | + |
Preference number: 5 (lower is better) Translates to: VATWLRWELAAAPSLFLSTLHEK*KKRMAF Trigger: GAACGCCATGCGCTTTTTCAACTTCTCATGGAGGGT...GGACAGAAAAAGGGAAGGAGCTGCAGCTAGCTCCCAGCGGAGCCATGTTGCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS TCA 90 bp | GTGGCCCACTACGACACCAATGCCACCGAAGTTCAAGGCGTTGGGTaGAGAGCGGGTATAAAATGGCGCCTGCAGTATTCCAGCTGGAAA | + |
Preference number: 5 (lower is better) Translates to: VAHYDTNATEVQGVG*RAGIKWRLQYSSWK Trigger: TTTCCAGCTGGAATACTGCAGGCGCCATTTTATACCCGCTCTTCACCCAACGCCTTGAACTTCGGTGGCATTGGTGTCGTAGTGGGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS CCA 90 bp | CTCACACTGGCCGTGGCATTTTCCAGTAGATGCTTGATGACAGCTTaGTTGTGTTCCCAGAGGTTGCTGAAGGTTCCCCAGCGTGAGTGG | + |
Preference number: 5 (lower is better) Translates to: LTLAVAFSSRCLMTA*LCSQRLLKVPQREW Trigger: CCACTCACGCTGGGGAACCTTCAGCAACCTCTGGGAACACAACCAAGCTGTCATCAAGCATCTACTGGAAAATGCCACGGCCAGTGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102518.10 ENSMUST00000151110.4 |
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CDS TCA 90 bp | TTCTTCGTCCCATACATAACCTCCATGAACTTCTCGTCGGCGTCCTaGAAGCGCTGGTCCAGGAAGGAGCTTGTTTTGCGTACCAGGTTC | + |
Preference number: 5 (lower is better) Translates to: FFVPYITSMNFSSAS*KRWSRKELVLRTRF Trigger: GAACCTGGTACGCAAAACAAGCTCCTTCCTGGACCAGCGCTTTCAGGACGCCGACGAGAAGTTCATGGAGGTTATGTATGGGACGAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CAA 90 bp | GGCTTGGGGTTCTGCTTTTGTGCCCATCCATCCCTAACCAGTCTGCGTCTTCCTTGTCTTCTGCAAAGGTaGCTTTCACAAACATGGGTC | + |
Preference number: 5 (lower is better) Translates to: GLGFCFCAHPSLTSLRLPCLLQR*LSQTWV Trigger: GACCCATGTTTGTGAAAGCAACCTTTGCAGAAGACA...AGGAAGACGCAGACTGGTTAGGGATGGATGGGCACAAAAGCAGAACCCCAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS TCA 90 bp | ATCTCTGTTGGGAGCTTTTCTGAGCTGGTCAGCTGTGACCCTCCATaGGAAGTTGAAAAAGCGCATGGCGTTCTCAAAGTAGAGATCAGG | + |
Preference number: 5 (lower is better) Translates to: ISVGSFSELVSCDPP*EVEKAHGVLKVEIR Trigger: CCTGATCTCTACTTTGAGAACGCCATGCGCTTTTTCAACTTCTCATGGAGGGTCACAGCTGACCAGCTCAGAAAAGCTCCCAACAGAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS-3UTR CAA 90 bp | CAGAGGATCAGTGAAGCTGACCACTTCAGGATGTCAGAATTGCTACAGAGAGGCTCCACCTGGATCACATaGCTGTTGGAATTCTTGGAG | + |
Preference number: 5 (lower is better) Translates to: QRISEADHFRMSELLQRGSTWIT*LLEFLE Trigger: CTCCAAGAATTCCAACAGCAATGTGATCCAGGTGGA...GCCTCTCTGTAGCAATTCTGACATCCTGAAGTGGTCAGCTTCACTGATCCTCTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS CCA 90 bp | TGGCTATATTCTTACTGTCTTCTGCAAAGGTTGCTTTCACAAACATaGGTCCCAGGGCAAAGCCCAGGTTGTTTTCCGTGTCACTCACAC | + |
Preference number: 5 (lower is better) Translates to: WLYSYCLLQRLLSQT*VPGQSPGCFPCHSH Trigger: GTGTGAGTGACACGGAAAACAACCTGGGCTTTGCCCTGGGACCCATGTTTGTGAAAGCAACCTTTGCAGAAGACAGTAAGAATATAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS GCA 90 bp | CTTGATCTCCATGATGATCTCACTGGCTATATTCTTACTGTCTTCTaGAAAGGTTGCTTTCACAAACATGGGTCCCAGGGCAAAGCCCAG | + |
Preference number: 5 (lower is better) Translates to: LDLHDDLTGYILTVF*KGCFHKHGSQGKAQ Trigger: CTGGGCTTTGCCCTGGGACCCATGTTTGTGAAAGCAACCTTTGCAGAAGACAGTAAGAATATAGCCAGTGAGATCATCATGGAGATCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS GCA 72 bp | CAGCACCACCAGCCGCTTCTCCACCGAGGTCCGAGCTaGCCAGCACCTCTGGCCGCTCCGGGAGCTGCGGAA | + |
Preference number: 6 (lower is better) Translates to: QHHQPLLHRGPS*PAPLAAPGAAE Trigger: TTCCGCAGCTCCCGGAGCGGCCAGAGGTGCTGGGCAGCTCGGACCTCGGTGGAGAAGCGGCTGGTGGTGCTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102518.10 ENSMUST00000151110.4 |
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CDS GCA 72 bp | CGGAGGCGTTCTTGTCTGGTACTGGATGCCCAGGGCTaGCAGGCAGGCCACCAACCCTGCCGCCAGAAGCGT | + |
Preference number: 6 (lower is better) Translates to: RRRSCLVLDAQG*QAGHQPCRQKR Trigger: ACGCTTCTGGCGGCAGGGTTGGTGGCCTGCCTGGCAGCCCTGGGCATCCAGTACCAGACAAGAACGCCTCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102518.10 ENSMUST00000151110.4 |
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CDS GCA 72 bp | GAGAGCGAGCCGATGACCCGGAAGCGAGAGGGGCTGTaGGGATCCGTGATGAGGCCTTCGTGGGAGCTCTCA | + |
Preference number: 6 (lower is better) Translates to: ESEPMTRKREGL*GSVMRPSWELS Trigger: TGAGAGCTCCCACGAAGGCCTCATCACGGATCCGCACAGCCCCTCTCGCTTCCGGGTCATCGGCTCGCTCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS CCA 72 bp | TGTTCCCAGAGGTTGCTGAAGGTTCCCCAGCGTGAGTaGCCATCGGGCACGGGGTTGGCCTTGATCCAGCCC | + |
Preference number: 6 (lower is better) Translates to: CSQRLLKVPQRE*PSGTGLALIQP Trigger: GGGCTGGATCAAGGCCAACCCCGTGCCCGATGGCCACTCACGCTGGGGAACCTTCAGCAACCTCTGGGAACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102518.10 ENSMUST00000151110.4 |
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CDS CCA 72 bp | CAGCGCCGTCTCAAAATCCAGGATCTGCTGCATCTGTaGCCGGATGGCATCCTCGTCCCCACCGCCCAGGAG | + |
Preference number: 6 (lower is better) Translates to: QRRLKIQDLLHL*PDGILVPTAQE Trigger: CTCCTGGGCGGTGGGGACGAGGATGCCATCCGGCCACAGATGCAGCAGATCCTGGATTTTGAGACGGCGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS CAA 90 bp | GGAGAGCCAGGCGGGCAGCGAAAGTGTTCTGAGAACTCCTTGGAGTaGGAGAGCGAGCCGATGACCCGGAAGCGAGAGGGGCTGTGCGGA | + |
Preference number: 6 (lower is better) Translates to: GEPGGQRKCSENSLE*ESEPMTRKREGLCG Trigger: TCCGCACAGCCCCTCTCGCTTCCGGGTCATCGGCTCGCTCTCCAACTCCAAGGAGTTCTCAGAACACTTTCGCTGCCCGCCTGGCTCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS CAA 90 bp | TGGTCACTGAGACACAGGCCTCCGTCAGACATACCGGAGGCGTTCTaGTCTGGTACTGGATGCCCAGGGCTGCCAGGCAGGCCACCAACC | + |
Preference number: 6 (lower is better) Translates to: WSLRHRPPSDIPEAF*SGTGCPGLPGRPPT Trigger: GGTTGGTGGCCTGCCTGGCAGCCCTGGGCATCCAGTACCAGACAAGAACGCCTCCGGTATGTCTGACGGAGGCCTGTGTCTCAGTGACCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102518.10 ENSMUST00000151110.4 |
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CDS CCA 72 bp | CGGAGAGTGAGTCCACCAGATCCTCTTCGTCCAGCGTaGCCCGCTTGTAGGTTGACATCCCCAGAGCGGCCA | + |
Preference number: 6 (lower is better) Translates to: RRVSPPDPLRPA*PACRLTSPERP Trigger: TGGCCGCTCTGGGGATGTCAACCTACAAGCGGGCCACGCTGGACGAAGAGGATCTGGTGGACTCACTCTCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151110.4 |
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CDS GCA 72 bp | ATGTTGGCCAGCGCCGTCTCAAAATCCAGGATCTGCTaGATCTGTGGCCGGATGGCATCCTCGTCCCCACCG | + |
Preference number: 6 (lower is better) Translates to: MLASAVSKSRIC*ICGRMASSSPP Trigger: CGGTGGGGACGAGGATGCCATCCGGCCACAGATGCAGCAGATCCTGGATTTTGAGACGGCGCTGGCCAACAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS CAA 72 bp | GAGCCAGGCGGGCAGCGAAAGTGTTCTGAGAACTCCTaGGAGTTGGAGAGCGAGCCGATGACCCGGAAGCGA | + |
Preference number: 6 (lower is better) Translates to: EPGGQRKCSENS*ELESEPMTRKR Trigger: TCGCTTCCGGGTCATCGGCTCGCTCTCCAACTCCAAGGAGTTCTCAGAACACTTTCGCTGCCCGCCTGGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS CAA 90 bp | GTGTCGACCGTTCACGGGCTCCCCGTTCACGCTGTAGTTGCTGTATaGCTGCACCATGCACTCCGTCTGCTGCTTGAACGCCTCCACGGA | + |
Preference number: 6 (lower is better) Translates to: VSTVHGLPVHAVVAV*LHHALRLLLERLHG Trigger: TCCGTGGAGGCGTTCAAGCAGCAGACGGAGTGCATGGTGCAGCAATACAGCAACTACAGCGTGAACGGGGAGCCCGTGAACGGTCGACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS GCA 72 bp | GTCGACCGTTCACGGGCTCCCCGTTCACGCTGTAGTTaGTGTATTGCTGCACCATGCACTCCGTCTGCTGCT | + |
Preference number: 6 (lower is better) Translates to: VDRSRAPRSRCS*CIAAPCTPSAA Trigger: AGCAGCAGACGGAGTGCATGGTGCAGCAATACAGCAACTACAGCGTGAACGGGGAGCCCGTGAACGGTCGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS CAA 90 bp | CTTCCACCAGGGTCGAAGGTTCCCATCCTTGTCGTACTCCCGACCTaGATCATCGAAAGCGTGAGTCAGCTCGTGGCCCACTACGACACC | + |
Preference number: 6 (lower is better) Translates to: LPPGSKVPILVVLPT*IIESVSQLVAHYDT Trigger: GGTGTCGTAGTGGGCCACGAGCTGACTCACGCTTTCGATGATCAAGGTCGGGAGTACGACAAGGATGGGAACCTTCGACCCTGGTGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS TCA 72 bp | TGCTGTATTGCTGCACCATGCACTCCGTCTGCTGCTTaGACGCCTCCACGGACGAGTTCTTCCACCAGGGTC | + |
Preference number: 6 (lower is better) Translates to: CCIAAPCTPSAA*TPPRTSSSTRV Trigger: GACCCTGGTGGAAGAACTCGTCCGTGGAGGCGTTCAAGCAGCAGACGGAGTGCATGGTGCAGCAATACAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS GCA 72 bp | AGCTGGTTGCTGGTGAGACCCAGGGTGGGCAGCGTCTaGTCAGCTCCGTTCTTCTTTACCCAGTTCTGGTAC | + |
Preference number: 6 (lower is better) Translates to: SWLLVRPRVGSV*SAPFFFTQFWY Trigger: GTACCAGAACTGGGTAAAGAAGAACGGAGCTGAGCAGACGCTGCCCACCCTGGGTCTCACCAGCAACCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS CAA 72 bp | GGGTCGAAGGTTCCCATCCTTGTCGTACTCCCGACCTaGATCATCGAAAGCGTGAGTCAGCTCGTGGCCCAC | + |
Preference number: 6 (lower is better) Translates to: GSKVPILVVLPT*IIESVSQLVAH Trigger: GTGGGCCACGAGCTGACTCACGCTTTCGATGATCAAGGTCGGGAGTACGACAAGGATGGGAACCTTCGACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS CAA 72 bp | GTTCACGGGCTCCCCGTTCACGCTGTAGTTGCTGTATaGCTGCACCATGCACTCCGTCTGCTGCTTGAACGC | + |
Preference number: 6 (lower is better) Translates to: VHGLPVHAVVAV*LHHALRLLLER Trigger: GCGTTCAAGCAGCAGACGGAGTGCATGGTGCAGCAATACAGCAACTACAGCGTGAACGGGGAGCCCGTGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS CCA 72 bp | CCTGCAGTATTCCAGCTGGAAACACGATCTCGTTCTTaGTGGGCGAGTAGTAAGCGTTCACCATGGGCGGCG | + |
Preference number: 6 (lower is better) Translates to: PAVFQLETRSRS*WASSKRSPWAA Trigger: CGCCGCCCATGGTGAACGCTTACTACTCGCCCACCAAGAACGAGATCGTGTTTCCAGCTGGAATACTGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS CAA 72 bp | AGATGCTTGATGACAGCTTGGTTGTGTTCCCAGAGGTaGCTGAAGGTTCCCCAGCGTGAGTGGCCATCGGGC | + |
Preference number: 6 (lower is better) Translates to: RCLMTAWLCSQR*LKVPQREWPSG Trigger: GCCCGATGGCCACTCACGCTGGGGAACCTTCAGCAACCTCTGGGAACACAACCAAGCTGTCATCAAGCATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102518.10 ENSMUST00000151110.4 |
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CDS CAA 72 bp | TTGCTGTATTGCTGCACCATGCACTCCGTCTGCTGCTaGAACGCCTCCACGGACGAGTTCTTCCACCAGGGT | + |
Preference number: 6 (lower is better) Translates to: LLYCCTMHSVCC*NASTDEFFHQG Trigger: ACCCTGGTGGAAGAACTCGTCCGTGGAGGCGTTCAAGCAGCAGACGGAGTGCATGGTGCAGCAATACAGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS TCA 72 bp | CTTGGAGTCCGCGCTGACATAAACAGAGAAGAAGGGTaGGGTGCGGTAGTGAGCTGTGACCACCTGCAGTGT | + |
Preference number: 6 (lower is better) Translates to: LGVRADINREEG*GAVVSCDHLQC Trigger: ACACTGCAGGTGGTCACAGCTCACTACCGCACCTCACCCTTCTTCTCTGTTTATGTCAGCGCGGACTCCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS CCA 72 bp | TCTCGTTCTTGGTGGGCGAGTAGTAAGCGTTCACCATaGGCGGCGTCATACTCCACTGATCTCTGTTGGGAG | + |
Preference number: 6 (lower is better) Translates to: SRSWWASSKRSP*AASYSTDLCWE Trigger: CTCCCAACAGAGATCAGTGGAGTATGACGCCGCCCATGGTGAACGCTTACTACTCGCCCACCAAGAACGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS CCA 72 bp | GCAGTATTCCAGCTGGAAACACGATCTCGTTCTTGGTaGGCGAGTAGTAAGCGTTCACCATGGGCGGCGTCA | + |
Preference number: 6 (lower is better) Translates to: AVFQLETRSRSW*ASSKRSPWAAS Trigger: TGACGCCGCCCATGGTGAACGCTTACTACTCGCCCACCAAGAACGAGATCGTGTTTCCAGCTGGAATACTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS CAA 72 bp | CAGCCTCCCAGCTTCTCAATCAGCTCCATCAGGGGCTaGGCCCGAAGCTCCTCAATCCTAGTTTCGTTCATG | + |
Preference number: 6 (lower is better) Translates to: QPPSFSISSIRG*ARSSSILVSFM Trigger: CATGAACGAAACTAGGATTGAGGAGCTTCGGGCCAAGCCCCTGATGGAGCTGATTGAGAAGCTGGGAGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS CAA 90 bp | ACACTGGCCGTGGCATTTTCCAGTAGATGCTTGATGACAGCTTGGTaGTGTTCCCAGAGGTTGCTGAAGGTTCCCCAGCGTGAGTGGCCA | + |
Preference number: 6 (lower is better) Translates to: TLAVAFSSRCLMTAW*CSQRLLKVPQREWP Trigger: TGGCCACTCACGCTGGGGAACCTTCAGCAACCTCTGGGAACACAACCAAGCTGTCATCAAGCATCTACTGGAAAATGCCACGGCCAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102518.10 ENSMUST00000151110.4 |
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CDS GCA 72 bp | GCCTCGCTCACACTGGCCGTGGCATTTTCCAGTAGATaGTTGATGACAGCTTGGTTGTGTTCCCAGAGGTTG | + |
Preference number: 6 (lower is better) Translates to: ASLTLAVAFSSR*LMTAWLCSQRL Trigger: CAACCTCTGGGAACACAACCAAGCTGTCATCAAGCATCTACTGGAAAATGCCACGGCCAGTGTGAGCGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102518.10 ENSMUST00000151110.4 |
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CDS CCA 72 bp | CCACTACGACACCAATGCCACCGAAGTTCAAGGCGTTaGGTGAAGAGCGGGTATAAAATGGCGCCTGCAGTA | + |
Preference number: 6 (lower is better) Translates to: PLRHQCHRSSRR*VKSGYKMAPAV Trigger: TACTGCAGGCGCCATTTTATACCCGCTCTTCACCCAACGCCTTGAACTTCGGTGGCATTGGTGTCGTAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS TCA 72 bp | CCATACATAACCTCCATGAACTTCTCGTCGGCGTCCTaGAAGCGCTGGTCCAGGAAGGAGCTTGTTTTGCGT | + |
Preference number: 6 (lower is better) Translates to: PYITSMNFSSAS*KRWSRKELVLR Trigger: ACGCAAAACAAGCTCCTTCCTGGACCAGCGCTTTCAGGACGCCGACGAGAAGTTCATGGAGGTTATGTATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS TCA 72 bp | TACGACACCAATGCCACCGAAGTTCAAGGCGTTGGGTaGAGAGCGGGTATAAAATGGCGCCTGCAGTATTCC | + |
Preference number: 6 (lower is better) Translates to: YDTNATEVQGVG*RAGIKWRLQYS Trigger: GGAATACTGCAGGCGCCATTTTATACCCGCTCTTCACCCAACGCCTTGAACTTCGGTGGCATTGGTGTCGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS CCA 72 bp | GCCGTGGCATTTTCCAGTAGATGCTTGATGACAGCTTaGTTGTGTTCCCAGAGGTTGCTGAAGGTTCCCCAG | + |
Preference number: 6 (lower is better) Translates to: AVAFSSRCLMTA*LCSQRLLKVPQ Trigger: CTGGGGAACCTTCAGCAACCTCTGGGAACACAACCAAGCTGTCATCAAGCATCTACTGGAAAATGCCACGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102518.10 ENSMUST00000151110.4 |
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CDS CAA 72 bp | TCGCTCACACTGGCCGTGGCATTTTCCAGTAGATGCTaGATGACAGCTTGGTTGTGTTCCCAGAGGTTGCTG | + |
Preference number: 6 (lower is better) Translates to: SLTLAVAFSSRC*MTAWLCSQRLL Trigger: CAGCAACCTCTGGGAACACAACCAAGCTGTCATCAAGCATCTACTGGAAAATGCCACGGCCAGTGTGAGCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102518.10 ENSMUST00000151110.4 |
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CDS CAA 72 bp | AATCCTAGTTTCGTTCATGCACGCACGGTAGTACACTaGGGCTTTTCTCTCTGCCTCGCTCACACTGGCCGT | + |
Preference number: 6 (lower is better) Translates to: NPSFVHARTVVH*GFSLCLAHTGR Trigger: ACGGCCAGTGTGAGCGAGGCAGAGAGAAAAGCCCAAGTGTACTACCGTGCGTGCATGAACGAAACTAGGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102518.10 ENSMUST00000151110.4 |
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CDS CAA 90 bp | AAGCTCCTCAATCCTAGTTTCGTTCATGCACGCACGGTAGTACACTaGGGCTTTTCTCTCTGCCTCGCTCACACTGGCCGTGGCATTTTC | + |
Preference number: 6 (lower is better) Translates to: KLLNPSFVHARTVVH*GFSLCLAHTGRGIF Trigger: GAAAATGCCACGGCCAGTGTGAGCGAGGCAGAGAGAAAAGCCCAAGTGTACTACCGTGCGTGCATGAACGAAACTAGGATTGAGGAGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102518.10 ENSMUST00000151110.4 |
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CDS CCA 72 bp | AGAGCGGGTATAAAATGGCGCCTGCAGTATTCCAGCTaGAAACACGATCTCGTTCTTGGTGGGCGAGTAGTA | + |
Preference number: 6 (lower is better) Translates to: RAGIKWRLQYSS*KHDLVLGGRVV Trigger: TACTACTCGCCCACCAAGAACGAGATCGTGTTTCCAGCTGGAATACTGCAGGCGCCATTTTATACCCGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS CAA 72 bp | GTGGCATTTTCCAGTAGATGCTTGATGACAGCTTGGTaGTGTTCCCAGAGGTTGCTGAAGGTTCCCCAGCGT | + |
Preference number: 6 (lower is better) Translates to: VAFSSRCLMTAW*CSQRLLKVPQR Trigger: ACGCTGGGGAACCTTCAGCAACCTCTGGGAACACAACCAAGCTGTCATCAAGCATCTACTGGAAAATGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102518.10 ENSMUST00000151110.4 |
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CDS CCA 72 bp | TCTTACTGTCTTCTGCAAAGGTTGCTTTCACAAACATaGGTCCCAGGGCAAAGCCCAGGTTGTTTTCCGTGT | + |
Preference number: 6 (lower is better) Translates to: SYCLLQRLLSQT*VPGQSPGCFPC Trigger: ACACGGAAAACAACCTGGGCTTTGCCCTGGGACCCATGTTTGTGAAAGCAACCTTTGCAGAAGACAGTAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS CAA 90 bp | GTTGTTGAGCAGACATTTGTCGGTGTTGTTGATGAGGGTGGAGACTaGTCTCAAGTATTCCTTGTCGTAGACCACGATTGGCTCAGACTC | + |
Preference number: 6 (lower is better) Translates to: VVEQTFVGVVDEGGD*SQVFLVVDHDWLRL Trigger: GAGTCTGAGCCAATCGTGGTCTACGACAAGGAATACTTGAGACAAGTCTCCACCCTCATCAACAACACCGACAAATGTCTGCTCAACAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS CAA 72 bp | CAGACATTTGTCGGTGTTGTTGATGAGGGTGGAGACTaGTCTCAAGTATTCCTTGTCGTAGACCACGATTGG | + |
Preference number: 6 (lower is better) Translates to: QTFVGVVDEGGD*SQVFLVVDHDW Trigger: CCAATCGTGGTCTACGACAAGGAATACTTGAGACAAGTCTCCACCCTCATCAACAACACCGACAAATGTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS CAA 90 bp | TCATCCATCCATTTCAGAGTGCTCAGACTCTCCTCAAACGCCTTCTaGATCTCCATGATGATCTCACTGGCTATATTCTTACTGTCTTCT | + |
Preference number: 6 (lower is better) Translates to: SSIHFRVLRLSSNAF*ISMMISLAIFLLSS Trigger: AGAAGACAGTAAGAATATAGCCAGTGAGATCATCATGGAGATCAAGAAGGCGTTTGAGGAGAGTCTGAGCACTCTGAAATGGATGGATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |
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CDS CAA 72 bp | CATTTCAGAGTGCTCAGACTCTCCTCAAACGCCTTCTaGATCTCCATGATGATCTCACTGGCTATATTCTTA | + |
Preference number: 6 (lower is better) Translates to: HFRVLRLSSNAF*ISMMISLAIFL Trigger: TAAGAATATAGCCAGTGAGATCATCATGGAGATCAAGAAGGCGTTTGAGGAGAGTCTGAGCACTCTGAAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102518.10 |