Pregenerated sensors for ECD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021810Ensembl transcript IDs: ENSMUST00000022344.4, ENSMUST00000223955.2
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | TGGAAGGAAGCAGTGTGCTCGATGGAGGGATGCTTCGACCCTTTCTaGGTACCCACTGACGCGCCTGTCCACAGCAGCTTGTATAGATTC | + |
Preference number: 1 (lower is better) Translates to: WKEAVCSMEGCFDPF*VPTDAPVHSSLYRF Trigger: GAATCTATACAAGCTGCTGTGGACAGGCGCGTCAGTGGGTACCCAGAAAGGGTCGAAGCATCCCTCCATCGAGCACACTGCTTCCTTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223955.2 |
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3UTR CCA 90 bp | AAGCTCATGAGAATCGGTGTCCAGGTCACAGGACTTGGGAGACGGTaGCCCGGGGACTCTGAAACCTGCACAGAAGACAGATGCTCTTTT | + |
Preference number: 1 (lower is better) Translates to: KLMRIGVQVTGLGRR*PGDSETCTEDRCSF Trigger: AAAAGAGCATCTGTCTTCTGTGCAGGTTTCAGAGTCCCCGGGCCACCGTCTCCCAAGTCCTGTGACCTGGACACCGATTCTCATGAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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3UTR TCA 90 bp | GGAGATTCCGTCCTGGGCAAATGTAAAACAAATCAAACAAGCTCATaGGAATCGGTGTCCAGGTCACAGGACTTGGGAGACGGTGGCCCG | + |
Preference number: 1 (lower is better) Translates to: GDSVLGKCKTNQTSS*ESVSRSQDLGDGGP Trigger: CGGGCCACCGTCTCCCAAGTCCTGTGACCTGGACACCGATTCTCATGAGCTTGTTTGATTTGTTTTACATTTGCCCAGGACGGAATCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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3UTR TCA 90 bp | AGCCTGGGTAGAGGAGGGGACAGAAGCCAAGCAAGTACCCAGGTGTaGGATGCCTCAGTCAGACCCAGTCTGTCTGCTAATGTCTTTAAT | + |
Preference number: 1 (lower is better) Translates to: SLGRGGDRSQASTQV*DASVRPSLSANVFN Trigger: ATTAAAGACATTAGCAGACAGACTGGGTCTGACTGAGGCATCTCACACCTGGGTACTTGCTTGGCTTCTGTCCCCTCCTCTACCCAGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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3UTR GCA 90 bp | AACTCATTTTCTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTaGCTCTGTCTCCCGAGTGCTGGGATTAAAGGCGTGCTTATGAAG | + |
Preference number: 1 (lower is better) Translates to: NSFSRPGWPRTQKSA*LCLPSAGIKGVLMK Trigger: CTTCATAAGCACGCCTTTAATCCCAGCACTCGGGAGACAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTAGAAAATGAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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3UTR TCA 90 bp | TGGGTACCCACTGACGCGCCTGTCCACAGCAGCTTGTATAGATTCTaGAGCCAAAACAGCTTCTGGGTGTGCCGAGATTATACTCAAAGC | + |
Preference number: 1 (lower is better) Translates to: WVPTDAPVHSSLYRF*SQNSFWVCRDYTQS Trigger: GCTTTGAGTATAATCTCGGCACACCCAGAAGCTGTTTTGGCTTCAGAATCTATACAAGCTGCTGTGGACAGGCGCGTCAGTGGGTACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223955.2 |
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3UTR CCA 90 bp | GGAGAAACTGAATATTCAGAATTACACCAACAGCCAACAGCACAGTaGTTTACTACAATGGAGATTCCGTCCTGGGCAAATGTAAAACAA | + |
Preference number: 1 (lower is better) Translates to: GETEYSELHQQPTAQ*FTTMEIPSWANVKQ Trigger: TTGTTTTACATTTGCCCAGGACGGAATCTCCATTGTAGTAAACCACTGTGCTGTTGGCTGTTGGTGTAATTCTGAATATTCAGTTTCTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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3UTR-3UTR CCA 90 bp | GAAGCCAAGCAAGTACCCAGGTGTGAGATGCCTCAGTCAGACCCAGTCTGTCTGCCAGGTCACAGGACTTaGGAGACGGTGGCCCGGGGA | + |
Preference number: 2 (lower is better) Translates to: EAKQVPRCEMPQSDPVCLPGHRT*ETVARG Trigger: TCCCCGGGCCACCGTCTCCCAAGTCCTGTGACCTGG...CAGACAGACTGGGTCTGACTGAGGCATCTCACACCTGGGTACTTGCTTGGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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3UTR-3UTR CCA 90 bp | GACAATGTGACACGGAACCAGAAGGGAATTAATGGGGAGGGGACCAAGAGAGGACGAAGCAGGGCAGCCTaGGTAGAGGAGGGGACAGAA | + |
Preference number: 2 (lower is better) Translates to: DNVTRNQKGINGEGTKRGRSRAA*VEEGTE Trigger: TTCTGTCCCCTCCTCTACCCAGGCTGCCCTGCTTCG...TCCTCTCTTGGTCCCCTCCCCATTAATTCCCTTCTGGTTCCGTGTCACATTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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3UTR-3UTR CCA 90 bp | TCGATGGAGGGATGCTTCGACCCTTTCTGGGTACCCACTGACGCGCCTGTCCACAGCCAAAACAGCTTCTaGGTGTGCCGAGATTATACT | + |
Preference number: 2 (lower is better) Translates to: SMEGCFDPFWVPTDAPVHSQNSF*VCRDYT Trigger: AGTATAATCTCGGCACACCCAGAAGCTGTTTTGGCT...GTGGACAGGCGCGTCAGTGGGTACCCAGAAAGGGTCGAAGCATCCCTCCATCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223955.2 |
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3UTR-3UTR TCA 90 bp | TTCAGAATTACACCAACAGCCAACAGCACAGTGGTTTACTACAATGGAGATTCCGTGGCCCGGGGACTCTaGAACCTGCACAGAAGACAG | + |
Preference number: 2 (lower is better) Translates to: FRITPTANSTVVYYNGDSVARGL*NLHRRQ Trigger: CTGTCTTCTGTGCAGGTTTCAGAGTCCCCGGGCCAC...GGAATCTCCATTGTAGTAAACCACTGTGCTGTTGGCTGTTGGTGTAATTCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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3UTR CAA 90 bp | CAGCTTCTGGGTGTGCCGAGATTATACTCAAAGCTTGCTGGATTGTaGGTGGTGTCATGGGTAACCATGGTATCCTTTCAGATTTCCTCG | + |
Preference number: 2 (lower is better) Translates to: QLLGVPRLYSKLAGL*VVSWVTMVSFQISS Trigger: CGAGGAAATCTGAAAGGATACCATGGTTACCCATGACACCACCAACAATCCAGCAAGCTTTGAGTATAATCTCGGCACACCCAGAAGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223955.2 |
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3UTR-3UTR GCA 90 bp | GACAATGTGACACGGAACCAGAAGGGAATTAATGGGGAGGGGACCAAGAGAGGAATGAAATGGGATTTTTaGCAACTTAGAATTCTGACC | + |
Preference number: 2 (lower is better) Translates to: DNVTRNQKGINGEGTKRGMKWDF*QLRILT Trigger: GGTCAGAATTCTAAGTTGGCAAAAATCCCATTTCAT...TCCTCTCTTGGTCCCCTCCCCATTAATTCCCTTCTGGTTCCGTGTCACATTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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3UTR GCA 72 bp | GCCGGCTGGAAGGAAGCAGTGTGCTCGATGGAGGGATaGTTCGACCCTTTCTGGGTACCCACTGACGCGCCT | + |
Preference number: 3 (lower is better) Translates to: AGWKEAVCSMEG*FDPFWVPTDAP Trigger: AGGCGCGTCAGTGGGTACCCAGAAAGGGTCGAAGCATCCCTCCATCGAGCACACTGCTTCCTTCCAGCCGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223955.2 |
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3UTR GCA 72 bp | TCTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTaGCTCTGTCTCCCGAGTGCTGGGATTAAAGGCGTG | + |
Preference number: 3 (lower is better) Translates to: SRPGWPRTQKSA*LCLPSAGIKGV Trigger: CACGCCTTTAATCCCAGCACTCGGGAGACAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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3UTR CCA 72 bp | AGAATCGGTGTCCAGGTCACAGGACTTGGGAGACGGTaGCCCGGGGACTCTGAAACCTGCACAGAAGACAGA | + |
Preference number: 3 (lower is better) Translates to: RIGVQVTGLGRR*PGDSETCTEDR Trigger: TCTGTCTTCTGTGCAGGTTTCAGAGTCCCCGGGCCACCGTCTCCCAAGTCCTGTGACCTGGACACCGATTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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3UTR CCA 72 bp | CCCTGGCTCTCCTGGAACTCATTTTCTAGACCAGGCTaGCCTCGAACTCAGAAATCCGCCTGCCTCTGTCTC | + |
Preference number: 3 (lower is better) Translates to: PWLSWNSFSRPG*PRTQKSACLCL Trigger: GAGACAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTAGAAAATGAGTTCCAGGAGAGCCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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3UTR-3UTR CAA 90 bp | TCGATGGAGGGATGCTTCGACCCTTTCTGGGTACCCACTGACGCGCCTGTCCACTCAAAGCTTGCTGGATaGTTGGTGGTGTCATGGGTA | + |
Preference number: 3 (lower is better) Translates to: SMEGCFDPFWVPTDAPVHSKLAG*LVVSWV Trigger: TACCCATGACACCACCAACAATCCAGCAAGCTTTGA...GTGGACAGGCGCGTCAGTGGGTACCCAGAAAGGGTCGAAGCATCCCTCCATCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223955.2 |
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3UTR-3UTR CAA 90 bp | ACAATGGAGATTCCGTCCTGGGCAAATGTAAAACAAATCAAACAAGCTCATGAGTCCAGGTCACAGGACTaGGGAGACGGTGGCCCGGGG | + |
Preference number: 3 (lower is better) Translates to: TMEIPSWANVKQIKQAHESRSQD*GDGGPG Trigger: CCCCGGGCCACCGTCTCCCAAGTCCTGTGACCTGGA...CTCATGAGCTTGTTTGATTTGTTTTACATTTGCCCAGGACGGAATCTCCATTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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3UTR-3UTR CAA 90 bp | ATGCCGGCTGGAAGGAAGCAGTGTGCTCGATGGAGGGATGCTTCGACCCTTTCTGATTATACTCAAAGCTaGCTGGATTGTTGGTGGTGT | + |
Preference number: 3 (lower is better) Translates to: MPAGRKQCARWRDASTLSDYTQS*LDCWWC Trigger: ACACCACCAACAATCCAGCAAGCTTTGAGTATAATC...AGAAAGGGTCGAAGCATCCCTCCATCGAGCACACTGCTTCCTTCCAGCCGGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223955.2 |
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3UTR TCA 72 bp | ACTGACGCGCCTGTCCACAGCAGCTTGTATAGATTCTaGAGCCAAAACAGCTTCTGGGTGTGCCGAGATTAT | + |
Preference number: 3 (lower is better) Translates to: TDAPVHSSLYRF*SQNSFWVCRDY Trigger: ATAATCTCGGCACACCCAGAAGCTGTTTTGGCTTCAGAATCTATACAAGCTGCTGTGGACAGGCGCGTCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223955.2 |
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3UTR GCA 72 bp | ACAGCTTCTGGGTGTGCCGAGATTATACTCAAAGCTTaGTGGATTGTTGGTGGTGTCATGGGTAACCATGGT | + |
Preference number: 3 (lower is better) Translates to: TASGCAEIILKA*WIVGGVMGNHG Trigger: ACCATGGTTACCCATGACACCACCAACAATCCAGCAAGCTTTGAGTATAATCTCGGCACACCCAGAAGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223955.2 |
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3UTR-3UTR CAA 90 bp | GCAGCTTGTATAGATTCTGAAGCCAAAACAGCTTCTGGGTGTGCCGAGATTATAAAGCTTGCTGGATTGTaGGTGGTGTCATGGGTAACC | + |
Preference number: 3 (lower is better) Translates to: AACIDSEAKTASGCAEIIKLAGL*VVSWVT Trigger: GGTTACCCATGACACCACCAACAATCCAGCAAGCTT...TATAATCTCGGCACACCCAGAAGCTGTTTTGGCTTCAGAATCTATACAAGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223955.2 |
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3UTR TCA 72 bp | GTCCTGGGCAAATGTAAAACAAATCAAACAAGCTCATaGGAATCGGTGTCCAGGTCACAGGACTTGGGAGAC | + |
Preference number: 3 (lower is better) Translates to: VLGKCKTNQTSS*ESVSRSQDLGD Trigger: GTCTCCCAAGTCCTGTGACCTGGACACCGATTCTCATGAGCTTGTTTGATTTGTTTTACATTTGCCCAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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3UTR CCA 72 bp | TTATACTCAAAGCTTGCTGGATTGTTGGTGGTGTCATaGGTAACCATGGTATCCTTTCAGATTTCCTCGGCA | + |
Preference number: 3 (lower is better) Translates to: LYSKLAGLLVVS*VTMVSFQISSA Trigger: TGCCGAGGAAATCTGAAAGGATACCATGGTTACCCATGACACCACCAACAATCCAGCAAGCTTTGAGTATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223955.2 |
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3UTR CCA 72 bp | GAATATTCAGAATTACACCAACAGCCAACAGCACAGTaGTTTACTACAATGGAGATTCCGTCCTGGGCAAAT | + |
Preference number: 3 (lower is better) Translates to: EYSELHQQPTAQ*FTTMEIPSWAN Trigger: ATTTGCCCAGGACGGAATCTCCATTGTAGTAAACCACTGTGCTGTTGGCTGTTGGTGTAATTCTGAATATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR TCA 90 bp | GAGGGGACAGAAGCCAAGCAAGTACCCAGGTGTGAGATGCCTCAGTCAGACCCAGCTGGCCCAGAGCGGTaGGGCAGTCACAAGAGACTT | + |
Preference number: 4 (lower is better) Translates to: EGTEAKQVPRCEMPQSDPAGPER*GSHKRL Trigger: AAGTCTCTTGTGACTGCCTCACCGCTCTGGGCCAGC...TGGGTCTGACTGAGGCATCTCACACCTGGGTACTTGCTTGGCTTCTGTCCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR CCA 90 bp | GGGACAGAAGCCAAGCAAGTACCCAGGTGTGAGATGCCTCAGTCAGACCCAGTCTGCAGCTCCTCCTTCTaGGGACCGGGCTGGGATTCT | + |
Preference number: 4 (lower is better) Translates to: GTEAKQVPRCEMPQSDPVCSSSF*GPGWDS Trigger: AGAATCCCAGCCCGGTCCCCAGAAGGAGGAGCTGCA...GACTGGGTCTGACTGAGGCATCTCACACCTGGGTACTTGCTTGGCTTCTGTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR GCA 90 bp | GGACAGAAGCCAAGCAAGTACCCAGGTGTGAGATGCCTCAGTCAGACCCAGTCTGCCCATGCTGGTGTGTaGCAGTTCCTGGTCCATCCG | + |
Preference number: 4 (lower is better) Translates to: GQKPSKYPGVRCLSQTQSAHAGV*QFLVHP Trigger: CGGATGGACCAGGAACTGGCACACACCAGCATGGGC...AGACTGGGTCTGACTGAGGCATCTCACACCTGGGTACTTGCTTGGCTTCTGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR CCA 90 bp | GGGACAGAAGCCAAGCAAGTACCCAGGTGTGAGATGCCTCAGTCAGACCCAGTCTCCACTCCGCCGGTCTaGCACAAACTTCTGCTGTAC | + |
Preference number: 4 (lower is better) Translates to: GTEAKQVPRCEMPQSDPVSTPPV*HKLLLY Trigger: GTACAGCAGAAGTTTGTGCCAGACCGGCGGAGTGGA...GACTGGGTCTGACTGAGGCATCTCACACCTGGGTACTTGCTTGGCTTCTGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR CCA 90 bp | GGGACAGAAGCCAAGCAAGTACCCAGGTGTGAGATGCCTCAGTCAGACCCAGTCAGCTTCTGCCCATGCTaGTGTGTGCCAGTTCCTGGT | + |
Preference number: 4 (lower is better) Translates to: GTEAKQVPRCEMPQSDPVSFCPC*CVPVPG Trigger: ACCAGGAACTGGCACACACCAGCATGGGCAGAAGCT...GACTGGGTCTGACTGAGGCATCTCACACCTGGGTACTTGCTTGGCTTCTGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR GCA 90 bp | GCTGGAAGGAAGCAGTGTGCTCGATGGAGGGATGCTTCGACCCTTTCTGGGTACAGCATCCTCTACCATTaGGAGCTTTCCACTGCCCTC | + |
Preference number: 4 (lower is better) Translates to: AGRKQCARWRDASTLSGYSILYH*ELSTAL Trigger: GAGGGCAGTGGAAAGCTCGCAATGGTAGAGGATGCT...GTACCCAGAAAGGGTCGAAGCATCCCTCCATCGAGCACACTGCTTCCTTCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223955.2 |
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CDS-3UTR GCA 90 bp | GACAATGTGACACGGAACCAGAAGGGAATTAATGGGGAGGGGACCAAGAGAGGAATTGGAAGCAGGTCCTaGCAGGCCCGCTTGGGAGCT | + |
Preference number: 4 (lower is better) Translates to: DNVTRNQKGINGEGTKRGIGSRS*QARLGA Trigger: AGCTCCCAAGCGGGCCTGGCAGGACCTGCTTCCAAT...TCCTCTCTTGGTCCCCTCCCCATTAATTCCCTTCTGGTTCCGTGTCACATTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR CCA 90 bp | TCCTGGAACTCATTTTCTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCGACTTTCAAGGAAGCTaGCCCAGAGCGGTGAGGCAG | + |
Preference number: 4 (lower is better) Translates to: SWNSFSRPGWPRTQKSACDFQGS*PRAVRQ Trigger: CTGCCTCACCGCTCTGGGCCAGCTTCCTTGAAAGTC...GCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTAGAAAATGAGTTCCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR CCA 90 bp | GGGACAGAAGCCAAGCAAGTACCCAGGTGTGAGATGCCTCAGTCAGACCCAGTCGCATCTTGCAGTAGCTaGTCTAACTGGTCTGGTGAG | + |
Preference number: 4 (lower is better) Translates to: GTEAKQVPRCEMPQSDPVASCSS*SNWSGE Trigger: CTCACCAGACCAGTTAGACCAGCTACTGCAAGATGC...GACTGGGTCTGACTGAGGCATCTCACACCTGGGTACTTGCTTGGCTTCTGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR TCA 90 bp | TCGATGGAGGGATGCTTCGACCCTTTCTGGGTACCCACTGACGCGCCTGTCCACCGTTCAATGTACTTCTaGAGAATCTCTCTGTGCTCT | + |
Preference number: 4 (lower is better) Translates to: SMEGCFDPFWVPTDAPVHRSMYF*RISLCS Trigger: AGAGCACAGAGAGATTCTTCAGAAGTACATTGAACG...GTGGACAGGCGCGTCAGTGGGTACCCAGAAAGGGTCGAAGCATCCCTCCATCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223955.2 |
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CDS-3UTR TCA 90 bp | GACAATGTGACACGGAACCAGAAGGGAATTAATGGGGAGGGGACCAAGAGAGGAAGAGACTCAGACTCCTaGGCCTCAAAGCCCACGTCA | + |
Preference number: 4 (lower is better) Translates to: DNVTRNQKGINGEGTKRGRDSDS*ASKPTS Trigger: TGACGTGGGCTTTGAGGCTCAGGAGTCTGAGTCTCT...TCCTCTCTTGGTCCCCTCCCCATTAATTCCCTTCTGGTTCCGTGTCACATTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR GCA 90 bp | GGACAGAAGCCAAGCAAGTACCCAGGTGTGAGATGCCTCAGTCAGACCCAGTCTCAGGTCTACATCCACTaGTTCAACAGCGCAATCTCC | + |
Preference number: 4 (lower is better) Translates to: GQKPSKYPGVRCLSQTQSQVYIH*FNSAIS Trigger: GGAGATTGCGCTGTTGAAGCAGTGGATGTAGACCTG...AGACTGGGTCTGACTGAGGCATCTCACACCTGGGTACTTGCTTGGCTTCTGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR CCA 90 bp | GCTGGAAGGAAGCAGTGTGCTCGATGGAGGGATGCTTCGACCCTTTCTGGGTACGGTATCAGGAAGAGATaGTACTCCACAGCATCCTCT | + |
Preference number: 4 (lower is better) Translates to: AGRKQCARWRDASTLSGYGIRKR*YSTASS Trigger: AGAGGATGCTGTGGAGTACCATCTCTTCCTGATACC...GTACCCAGAAAGGGTCGAAGCATCCCTCCATCGAGCACACTGCTTCCTTCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223955.2 |
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CDS-3UTR GCA 90 bp | GGGACAGAAGCCAAGCAAGTACCCAGGTGTGAGATGCCTCAGTCAGACCCAGTCAACAGCGCAATCTCCTaGACCAGAATCTTCTTCATC | + |
Preference number: 4 (lower is better) Translates to: GTEAKQVPRCEMPQSDPVNSAIS*TRIFFI Trigger: GATGAAGAAGATTCTGGTGCAGGAGATTGCGCTGTT...GACTGGGTCTGACTGAGGCATCTCACACCTGGGTACTTGCTTGGCTTCTGTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR CCA 90 bp | GACAATGTGACACGGAACCAGAAGGGAATTAATGGGGAGGGGACCAAGAGAGGAAGCTCTGCCCCCTTGTaGCTAGACACTTTGGAGATG | + |
Preference number: 4 (lower is better) Translates to: DNVTRNQKGINGEGTKRGSSAPL*LDTLEM Trigger: CATCTCCAAAGTGTCTAGCCACAAGGGGGCAGAGCT...TCCTCTCTTGGTCCCCTCCCCATTAATTCCCTTCTGGTTCCGTGTCACATTGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR CCA 90 bp | AGGAGGGGACAGAAGCCAAGCAAGTACCCAGGTGTGAGATGCCTCAGTCAGACCTTGTCATTTGCAGTGTaGGATGGAGGGTCCTTATTC | + |
Preference number: 4 (lower is better) Translates to: RRGQKPSKYPGVRCLSQTLSFAV*DGGSLF Trigger: GAATAAGGACCCTCCATCCCACACTGCAAATGACAA...GGTCTGACTGAGGCATCTCACACCTGGGTACTTGCTTGGCTTCTGTCCCCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR TCA 90 bp | TCCTGGAACTCATTTTCTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCGTCATGCCGTACATATaGGCAGGAACACCTCCTTTT | + |
Preference number: 4 (lower is better) Translates to: SWNSFSRPGWPRTQKSACVMPYI*AGTPPF Trigger: AAAAGGAGGTGTTCCTGCTCATATGTACGGCATGAC...GCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTAGAAAATGAGTTCCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR CCA 90 bp | GGACAGAAGCCAAGCAAGTACCCAGGTGTGAGATGCCTCAGTCAGACCCAGTCTGCCTCTGGCTTTATCTaGTATCAGGAAGAGATGGTA | + |
Preference number: 4 (lower is better) Translates to: GQKPSKYPGVRCLSQTQSASGFI*YQEEMV Trigger: TACCATCTCTTCCTGATACCAGATAAAGCCAGAGGC...AGACTGGGTCTGACTGAGGCATCTCACACCTGGGTACTTGCTTGGCTTCTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR CCA 90 bp | TCCTGGAACTCATTTTCTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCAGTAGCTGGTCTAACTaGTCTGGTGAGAGGTCTAAC | + |
Preference number: 4 (lower is better) Translates to: SWNSFSRPGWPRTQKSACSSWSN*SGERSN Trigger: GTTAGACCTCTCACCAGACCAGTTAGACCAGCTACT...GCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTAGAAAATGAGTTCCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR CCA 90 bp | GGGTACCCACTGACGCGCCTGTCCACAGCAGCTTGTATAGATTCTGAAGCCAAAGCCTCTGGCTTTATCTaGTATCAGGAAGAGATGGTA | + |
Preference number: 4 (lower is better) Translates to: GYPLTRLSTAACIDSEAKASGFI*YQEEMV Trigger: TACCATCTCTTCCTGATACCAGATAAAGCCAGAGGC...TTTGGCTTCAGAATCTATACAAGCTGCTGTGGACAGGCGCGTCAGTGGGTACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223955.2 |
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CDS-3UTR TCA 90 bp | GACAATGTGACACGGAACCAGAAGGGAATTAATGGGGAGGGGACCAAGAGAGGAAATCTGCATCAAAAGTaGTTGGAGCTTCCGAAGGGT | + |
Preference number: 4 (lower is better) Translates to: DNVTRNQKGINGEGTKRGNLHQK*LELPKG Trigger: ACCCTTCGGAAGCTCCAATCACTTTTGATGCAGATT...TCCTCTCTTGGTCCCCTCCCCATTAATTCCCTTCTGGTTCCGTGTCACATTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR GCA 90 bp | AGTGCTGGGATTAAAGGCGTGCTTATGAAGAGTCGTTTATTCCTGAGAAGGGTGTGGAAGGAAGCAGTGTaGTCGATGGAGGGATGCTTC | + |
Preference number: 4 (lower is better) Translates to: SAGIKGVLMKSRLFLRRVWKEAV*SMEGCF Trigger: GAAGCATCCCTCCATCGAGCACACTGCTTCCTTCCA...CACCCTTCTCAGGAATAAACGACTCTTCATAAGCACGCCTTTAATCCCAGCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR CCA 90 bp | TTCAGAATTACACCAACAGCCAACAGCACAGTGGTTTACTACAATGGAGATTCCTGCTTCGACCCTTTCTaGGTACCCACTGACGCGCCT | + |
Preference number: 4 (lower is better) Translates to: FRITPTANSTVVYYNGDSCFDPF*VPTDAP Trigger: AGGCGCGTCAGTGGGTACCCAGAAAGGGTCGAAGCA...GGAATCTCCATTGTAGTAAACCACTGTGCTGTTGGCTGTTGGTGTAATTCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR CCA 90 bp | GACAATGTGACACGGAACCAGAAGGGAATTAATGGGGAGGGGACCAAGAGAGGATCACAAGAGACTTCCTaGAGTCAGAAAAATGTGGGC | + |
Preference number: 4 (lower is better) Translates to: DNVTRNQKGINGEGTKRGSQETS*SQKNVG Trigger: GCCCACATTTTTCTGACTCCAGGAAGTCTCTTGTGA...TCCTCTCTTGGTCCCCTCCCCATTAATTCCCTTCTGGTTCCGTGTCACATTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR TCA 90 bp | ACTACAATGGAGATTCCGTCCTGGGCAAATGTAAAACAAATCAAACAAGCTCATTCGGTACTGGGGATGTaGTGGAGGTGGGAGCCCGTA | + |
Preference number: 4 (lower is better) Translates to: TTMEIPSWANVKQIKQAHSVLGM*WRWEPV Trigger: TACGGGCTCCCACCTCCATCACATCCCCAGTACCGA...ATGAGCTTGTTTGATTTGTTTTACATTTGCCCAGGACGGAATCTCCATTGTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR GCA 90 bp | AATTACACCAACAGCCAACAGCACAGTGGTTTACTACAATGGAGATTCCGTCCTAGCATCCTCTACCATTaGGAGCTTTCCACTGCCCTC | + |
Preference number: 4 (lower is better) Translates to: NYTNSQQHSGLLQWRFRPSILYH*ELSTAL Trigger: GAGGGCAGTGGAAAGCTCGCAATGGTAGAGGATGCT...AGGACGGAATCTCCATTGTAGTAAACCACTGTGCTGTTGGCTGTTGGTGTAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR GCA 90 bp | AAGGGAGAAACTGAATATTCAGAATTACACCAACAGCCAACAGCACAGTGGTTTAGCAGCCTGGGCTGTTaGTTGAGCACCGCCACAATG | + |
Preference number: 4 (lower is better) Translates to: KGETEYSELHQQPTAQWFSSLGC*LSTATM Trigger: CATTGTGGCGGTGCTCAAGCAACAGCCCAGGCTGCT...AAACCACTGTGCTGTTGGCTGTTGGTGTAATTCTGAATATTCAGTTTCTCCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR CCA 90 bp | AACATACCTAAGGGAGAAACTGAATATTCAGAATTACACCAACAGCCAACAGCACGCCACAATGCCGGCTaGAAGGAAGCAGTGTGCTCG | + |
Preference number: 4 (lower is better) Translates to: NIPKGETEYSELHQQPTARHNAG*KEAVCS Trigger: CGAGCACACTGCTTCCTTCCAGCCGGCATTGTGGCG...TGCTGTTGGCTGTTGGTGTAATTCTGAATATTCAGTTTCTCCCTTAGGTATGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR GCA 90 bp | GCAAATGTAAAACAAATCAAACAAGCTCATGAGAATCGGTGTCCAGGTCACAGGTGCTCGATGGAGGGATaGTTCGACCCTTTCTGGGTA | + |
Preference number: 4 (lower is better) Translates to: ANVKQIKQAHENRCPGHRCSMEG*FDPFWV Trigger: TACCCAGAAAGGGTCGAAGCATCCCTCCATCGAGCA...CCTGTGACCTGGACACCGATTCTCATGAGCTTGTTTGATTTGTTTTACATTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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3UTR CAA 72 bp | GGTGTGCCGAGATTATACTCAAAGCTTGCTGGATTGTaGGTGGTGTCATGGGTAACCATGGTATCCTTTCAG | + |
Preference number: 4 (lower is better) Translates to: GVPRLYSKLAGL*VVSWVTMVSFQ Trigger: CTGAAAGGATACCATGGTTACCCATGACACCACCAACAATCCAGCAAGCTTTGAGTATAATCTCGGCACACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223955.2 |
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CDS-3UTR CCA 90 bp | ATGGAGATTCCGTCCTGGGCAAATGTAAAACAAATCAAACAAGCTCATGAGAATAGGCTCTTAGGTCAATaGGGTCCCGTAGGTAGAAGG | + |
Preference number: 4 (lower is better) Translates to: MEIPSWANVKQIKQAHENRLLGQ*GPVGRR Trigger: CCTTCTACCTACGGGACCCCATTGACCTAAGAGCCT...ATTCTCATGAGCTTGTTTGATTTGTTTTACATTTGCCCAGGACGGAATCTCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR CCA 90 bp | ACTACAATGGAGATTCCGTCCTGGGCAAATGTAAAACAAATCAAACAAGCTCATTGCTGTGTAACAGATTaGAAGCAGGTCCTGCCAGGC | + |
Preference number: 4 (lower is better) Translates to: TTMEIPSWANVKQIKQAHCCVTD*KQVLPG Trigger: GCCTGGCAGGACCTGCTTCCAATCTGTTACACAGCA...ATGAGCTTGTTTGATTTGTTTTACATTTGCCCAGGACGGAATCTCCATTGTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR TCA 90 bp | AAACAAATCAAACAAGCTCATGAGAATCGGTGTCCAGGTCACAGGACTTGGGAGGGATTCCAGTATATTTaGAATCAGGTTCAGGTCTAC | + |
Preference number: 4 (lower is better) Translates to: KQIKQAHENRCPGHRTWEGFQYI*NQVQVY Trigger: GTAGACCTGAACCTGATTTCAAATATACTGGAATCC...CTCCCAAGTCCTGTGACCTGGACACCGATTCTCATGAGCTTGTTTGATTTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR GCA 90 bp | ACAATGGAGATTCCGTCCTGGGCAAATGTAAAACAAATCAAACAAGCTCATGAGCATGAGCCAACTTCATaGCCAGTTCATAAGCTCGGT | + |
Preference number: 4 (lower is better) Translates to: TMEIPSWANVKQIKQAHEHEPTS*PVHKLG Trigger: ACCGAGCTTATGAACTGGGCATGAAGTTGGCTCATG...CTCATGAGCTTGTTTGATTTGTTTTACATTTGCCCAGGACGGAATCTCCATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR CCA 90 bp | TTCAGAATTACACCAACAGCCAACAGCACAGTGGTTTACTACAATGGAGATTCCTGCATCAAAAGTGATTaGAGCTTCCGAAGGGTCTCT | + |
Preference number: 4 (lower is better) Translates to: FRITPTANSTVVYYNGDSCIKSD*SFRRVS Trigger: AGAGACCCTTCGGAAGCTCCAATCACTTTTGATGCA...GGAATCTCCATTGTAGTAAACCACTGTGCTGTTGGCTGTTGGTGTAATTCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR TCA 90 bp | GCAAATGTAAAACAAATCAAACAAGCTCATGAGAATCGGTGTCCAGGTCACAGGAGCTTGTATAGATTCTaGAGCCAAAACAGCTTCTGG | + |
Preference number: 4 (lower is better) Translates to: ANVKQIKQAHENRCPGHRSLYRF*SQNSFW Trigger: CCAGAAGCTGTTTTGGCTTCAGAATCTATACAAGCT...CCTGTGACCTGGACACCGATTCTCATGAGCTTGTTTGATTTGTTTTACATTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR CCA 90 bp | ACTACAATGGAGATTCCGTCCTGGGCAAATGTAAAACAAATCAAACAAGCTCATGGTATCAGGAAGAGATaGTACTCCACAGCATCCTCT | + |
Preference number: 4 (lower is better) Translates to: TTMEIPSWANVKQIKQAHGIRKR*YSTASS Trigger: AGAGGATGCTGTGGAGTACCATCTCTTCCTGATACC...ATGAGCTTGTTTGATTTGTTTTACATTTGCCCAGGACGGAATCTCCATTGTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR CCA 90 bp | AAGGGAGAAACTGAATATTCAGAATTACACCAACAGCCAACAGCACAGTGGTTTAGCCAAAACAGCTTCTaGGTGTGCCGAGATTATACT | + |
Preference number: 4 (lower is better) Translates to: KGETEYSELHQQPTAQWFSQNSF*VCRDYT Trigger: AGTATAATCTCGGCACACCCAGAAGCTGTTTTGGCT...AAACCACTGTGCTGTTGGCTGTTGGTGTAATTCTGAATATTCAGTTTCTCCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR GCA 90 bp | GCAAATGTAAAACAAATCAAACAAGCTCATGAGAATCGGTGTCCAGGTCACAGGATTATACTCAAAGCTTaGTGGATTGTTGGTGGTGTC | + |
Preference number: 4 (lower is better) Translates to: ANVKQIKQAHENRCPGHRIILKA*WIVGGV Trigger: GACACCACCAACAATCCAGCAAGCTTTGAGTATAAT...CCTGTGACCTGGACACCGATTCTCATGAGCTTGTTTGATTTGTTTTACATTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR TCA 90 bp | ACTACAATGGAGATTCCGTCCTGGGCAAATGTAAAACAAATCAAACAAGCTCATCGTTCAATGTACTTCTaGAGAATCTCTCTGTGCTCT | + |
Preference number: 4 (lower is better) Translates to: TTMEIPSWANVKQIKQAHRSMYF*RISLCS Trigger: AGAGCACAGAGAGATTCTTCAGAAGTACATTGAACG...ATGAGCTTGTTTGATTTGTTTTACATTTGCCCAGGACGGAATCTCCATTGTAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR TCA 90 bp | GCAAATGTAAAACAAATCAAACAAGCTCATGAGAATCGGTGTCCAGGTCACAGGAGAATCTTCTTCATCTaGATTGTCATTTGCAGTGTG | + |
Preference number: 4 (lower is better) Translates to: ANVKQIKQAHENRCPGHRRIFFI*IVICSV Trigger: CACACTGCAAATGACAATTCAGATGAAGAAGATTCT...CCTGTGACCTGGACACCGATTCTCATGAGCTTGTTTGATTTGTTTTACATTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS TCA 90 bp | GGTAGAAGGCCTGGACGGCTGCCGACAGCAGCCTGGGCTGTTGCTTaGGCACCGCCACAATGCCGGCTGGAAGGAAGCAGTGTGCTCGAT | + |
Preference number: 5 (lower is better) Translates to: GRRPGRLPTAAWAVA*APPQCRLEGSSVLD Trigger: ATCGAGCACACTGCTTCCTTCCAGCCGGCATTGTGGCGGTGCTCAAGCAACAGCCCAGGCTGCTGTCGGCAGCCGTCCAGGCCTTCTACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS GCA 90 bp | CGCCACAATGCCGGCTGGAAGGAAGCAGTGTGCTCGATGGAGGGATaGTTCGACCCTTTCTGGGTACCCACTGACGCGCCTGTCCACAGC | + |
Preference number: 5 (lower is better) Translates to: RHNAGWKEAVCSMEG*FDPFWVPTDAPVHS Trigger: GCTGTGGACAGGCGCGTCAGTGGGTACCCAGAAAGGGTCGAAGCATCCCTCCATCGAGCACACTGCTTCCTTCCAGCCGGCATTGTGGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS CCA 90 bp | TTGAGCACCGCCACAATGCCGGCTGGAAGGAAGCAGTGTGCTCGATaGAGGGATGCTTCGACCCTTTCTGGGTACCCACTGACGCGCCTG | + |
Preference number: 5 (lower is better) Translates to: LSTATMPAGRKQCAR*RDASTLSGYPLTRL Trigger: CAGGCGCGTCAGTGGGTACCCAGAAAGGGTCGAAGCATCCCTCCATCGAGCACACTGCTTCCTTCCAGCCGGCATTGTGGCGGTGCTCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS CCA 90 bp | CGACAGCAGCCTGGGCTGTTGCTTGAGCACCGCCACAATGCCGGCTaGAAGGAAGCAGTGTGCTCGATGGAGGGATGCTTCGACCCTTTC | + |
Preference number: 5 (lower is better) Translates to: RQQPGLLLEHRHNAG*KEAVCSMEGCFDPF Trigger: GAAAGGGTCGAAGCATCCCTCCATCGAGCACACTGCTTCCTTCCAGCCGGCATTGTGGCGGTGCTCAAGCAACAGCCCAGGCTGCTGTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS GCA 90 bp | ATTCAATCGCTCCCGCGTGGTGAAGCTTCTGCCCATGCTGGTGTGTaGCAGTTCCTGGTCCATCCGGGCCATGTAGGACTTGAGGCTGCC | + |
Preference number: 5 (lower is better) Translates to: IQSLPRGEASAHAGV*QFLVHPGHVGLEAA Trigger: GGCAGCCTCAAGTCCTACATGGCCCGGATGGACCAGGAACTGGCACACACCAGCATGGGCAGAAGCTTCACCACGCGGGAGCGATTGAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS GCA 90 bp | CTGTTGCTTGAGCACCGCCACAATGCCGGCTGGAAGGAAGCAGTGTaGTCGATGGAGGGATGCTTCGACCCTTTCTGGGTACCCACTGAC | + |
Preference number: 5 (lower is better) Translates to: LLLEHRHNAGWKEAV*SMEGCFDPFWVPTD Trigger: GTCAGTGGGTACCCAGAAAGGGTCGAAGCATCCCTCCATCGAGCACACTGCTTCCTTCCAGCCGGCATTGTGGCGGTGCTCAAGCAACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS CCA 90 bp | GATCAGCGTTGTCGGGCAGTCGCACACCCATGCTGTGTAACAGATTaGAAGCAGGTCCTGCCAGGCCCGCTTGGGAGCTGTAGGATTCCA | + |
Preference number: 5 (lower is better) Translates to: DQRCRAVAHPCCVTD*KQVLPGPLGSCRIP Trigger: TGGAATCCTACAGCTCCCAAGCGGGCCTGGCAGGACCTGCTTCCAATCTGTTACACAGCATGGGTGTGCGACTGCCCGACAACGCTGATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS TCA 90 bp | TTGCAGTGTGGGATGGAGGGTCCTTATTCAATCGCTCCCGCGTGGTaGAGCTTCTGCCCATGCTGGTGTGTGCCAGTTCCTGGTCCATCC | + |
Preference number: 5 (lower is better) Translates to: LQCGMEGPYSIAPAW*SFCPCWCVPVPGPS Trigger: GGATGGACCAGGAACTGGCACACACCAGCATGGGCAGAAGCTTCACCACGCGGGAGCGATTGAATAAGGACCCTCCATCCCACACTGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS GCA 90 bp | GGAGGTGGGAGCCCGTATCCACTCCGCCGGTCTGGCACAAACTTCTaGTGTACCAGCTGTGCGTACAGACATTTCGTGAAAGTGACCGAG | + |
Preference number: 5 (lower is better) Translates to: GGGSPYPLRRSGTNF*CTSCAYRHFVKVTE Trigger: CTCGGTCACTTTCACGAAATGTCTGTACGCACAGCTGGTACAGCAGAAGTTTGTGCCAGACCGGCGGAGTGGATACGGGCTCCCACCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS TCA 90 bp | ATGAGCCAACTTCATGCCCAGTTCATAAGCTCGGTACTGGGGATGTaGTGGAGGTGGGAGCCCGTATCCACTCCGCCGGTCTGGCACAAA | + |
Preference number: 5 (lower is better) Translates to: MSQLHAQFISSVLGM*WRWEPVSTPPVWHK Trigger: TTTGTGCCAGACCGGCGGAGTGGATACGGGCTCCCACCTCCATCACATCCCCAGTACCGAGCTTATGAACTGGGCATGAAGTTGGCTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS GCA 90 bp | TCCTTCTGGGGACCGGGCTGGGATTCTTTTCTGCCCGCAGCATCTTaGAGTAGCTGGTCTAACTGGTCTGGTGAGAGGTCTAACCACTGG | + |
Preference number: 5 (lower is better) Translates to: SFWGPGWDSFLPAAS*SSWSNWSGERSNHW Trigger: CCAGTGGTTAGACCTCTCACCAGACCAGTTAGACCAGCTACTGCAAGATGCTGCGGGCAGAAAAGAATCCCAGCCCGGTCCCCAGAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS GCA 90 bp | AGTTCTGCAGCTCCTCCTTCTGGGGACCGGGCTGGGATTCTTTTCTaGCCGCAGCATCTTGCAGTAGCTGGTCTAACTGGTCTGGTGAGA | + |
Preference number: 5 (lower is better) Translates to: SSAAPPSGDRAGILF*PQHLAVAGLTGLVR Trigger: TCTCACCAGACCAGTTAGACCAGCTACTGCAAGATGCTGCGGGCAGAAAAGAATCCCAGCCCGGTCCCCAGAAGGAGGAGCTGCAGAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS CCA 90 bp | GGACCGGGCTGGGATTCTTTTCTGCCCGCAGCATCTTGCAGTAGCTaGTCTAACTGGTCTGGTGAGAGGTCTAACCACTGGTCATCGTCC | + |
Preference number: 5 (lower is better) Translates to: GPGWDSFLPAASCSS*SNWSGERSNHWSSS Trigger: GGACGATGACCAGTGGTTAGACCTCTCACCAGACCAGTTAGACCAGCTACTGCAAGATGCTGCGGGCAGAAAAGAATCCCAGCCCGGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS CCA 90 bp | GTGATTGGAGCTTCCGAAGGGTCTCTGGGCAGCTCTGCCCCCTTGTaGCTAGACACTTTGGAGATGAAGGCCTTCATGCTGTCTGAGACC | + |
Preference number: 5 (lower is better) Translates to: VIGASEGSLGSSAPL*LDTLEMKAFMLSET Trigger: GGTCTCAGACAGCATGAAGGCCTTCATCTCCAAAGTGTCTAGCCACAAGGGGGCAGAGCTGCCCAGAGACCCTTCGGAAGCTCCAATCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS CCA 90 bp | TGGGATTCTTTTCTGCCCGCAGCATCTTGCAGTAGCTGGTCTAACTaGTCTGGTGAGAGGTCTAACCACTGGTCATCGTCCTCCGGAGGA | + |
Preference number: 5 (lower is better) Translates to: WDSFLPAASCSSWSN*SGERSNHWSSSSGG Trigger: TCCTCCGGAGGACGATGACCAGTGGTTAGACCTCTCACCAGACCAGTTAGACCAGCTACTGCAAGATGCTGCGGGCAGAAAAGAATCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR CAA 90 bp | AGGAGGGGACAGAAGCCAAGCAAGTACCCAGGTGTGAGATGCCTCAGTCAGACCAGGAACTCACCATCATaGTCTTCAACCCTGGCCACT | + |
Preference number: 5 (lower is better) Translates to: RRGQKPSKYPGVRCLSQTRNSPS*SSTLAT Trigger: AGTGGCCAGGGTTGAAGACAATGATGGTGAGTTCCT...GGTCTGACTGAGGCATCTCACACCTGGGTACTTGCTTGGCTTCTGTCCCCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR CAA 90 bp | GAGGGGACAGAAGCCAAGCAAGTACCCAGGTGTGAGATGCCTCAGTCAGACCCAAAGCTTGCTGGATTGTaGGTGGTGTCATGGGTAACC | + |
Preference number: 5 (lower is better) Translates to: EGTEAKQVPRCEMPQSDPKLAGL*VVSWVT Trigger: GGTTACCCATGACACCACCAACAATCCAGCAAGCTT...TGGGTCTGACTGAGGCATCTCACACCTGGGTACTTGCTTGGCTTCTGTCCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR CAA 90 bp | TCACAGGACTTGGGAGACGGTGGCCCGGGGACTCTGAAACCTGCACAGAAGACATTGTGGCTAGACACTTaGGAGATGAAGGCCTTCATG | + |
Preference number: 5 (lower is better) Translates to: SQDLGDGGPGTLKPAQKTLWLDT*EMKAFM Trigger: CATGAAGGCCTTCATCTCCAAAGTGTCTAGCCACAA...TGTCTTCTGTGCAGGTTTCAGAGTCCCCGGGCCACCGTCTCCCAAGTCCTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS CCA 90 bp | TCTTGCAGTAGCTGGTCTAACTGGTCTGGTGAGAGGTCTAACCACTaGTCATCGTCCTCCGGAGGAAGGTCAGCTTCTTCTGTCTTGAGC | + |
Preference number: 5 (lower is better) Translates to: SCSSWSNWSGERSNH*SSSSGGRSASSVLS Trigger: GCTCAAGACAGAAGAAGCTGACCTTCCTCCGGAGGACGATGACCAGTGGTTAGACCTCTCACCAGACCAGTTAGACCAGCTACTGCAAGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR CAA 90 bp | TCACAGGACTTGGGAGACGGTGGCCCGGGGACTCTGAAACCTGCACAGAAGACACCTCCTTTTGCAGGCTaGTATTTGAGATTGAAAGGC | + |
Preference number: 5 (lower is better) Translates to: SQDLGDGGPGTLKPAQKTPPFAG*YLRLKG Trigger: GCCTTTCAATCTCAAATACAAGCCTGCAAAAGGAGG...TGTCTTCTGTGCAGGTTTCAGAGTCCCCGGGCCACCGTCTCCCAAGTCCTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR CAA 90 bp | GAGGGGACAGAAGCCAAGCAAGTACCCAGGTGTGAGATGCCTCAGTCAGACCCATCAAAGCTTGCTGGATaGTTGGTGGTGTCATGGGTA | + |
Preference number: 5 (lower is better) Translates to: EGTEAKQVPRCEMPQSDPSKLAG*LVVSWV Trigger: TACCCATGACACCACCAACAATCCAGCAAGCTTTGA...TGGGTCTGACTGAGGCATCTCACACCTGGGTACTTGCTTGGCTTCTGTCCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR CAA 90 bp | TCCTGGAACTCATTTTCTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCATGCTGTGTAACAGATaGGAAGCAGGTCCTGCCAGG | + |
Preference number: 5 (lower is better) Translates to: SWNSFSRPGWPRTQKSACMLCNR*EAGPAR Trigger: CCTGGCAGGACCTGCTTCCAATCTGTTACACAGCAT...GCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTAGAAAATGAGTTCCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS GCA 90 bp | GTATCCACTCCGCCGGTCTGGCACAAACTTCTGCTGTACCAGCTGTaGGTACAGACATTTCGTGAAAGTGACCGAGGCCATTATTCGTGT | + |
Preference number: 5 (lower is better) Translates to: VSTPPVWHKLLLYQL*VQTFRESDRGHYSC Trigger: ACACGAATAATGGCCTCGGTCACTTTCACGAAATGTCTGTACGCACAGCTGGTACAGCAGAAGTTTGTGCCAGACCGGCGGAGTGGATAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS TCA 90 bp | AGGTCCTGCCAGGCCCGCTTGGGAGCTGTAGGATTCCAGTATATTTaGAATCAGGTTCAGGTCTACATCCACTGCTTCAACAGCGCAATC | + |
Preference number: 5 (lower is better) Translates to: RSCQARLGAVGFQYI*NQVQVYIHCFNSAI Trigger: GATTGCGCTGTTGAAGCAGTGGATGTAGACCTGAACCTGATTTCAAATATACTGGAATCCTACAGCTCCCAAGCGGGCCTGGCAGGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR CAA 90 bp | AGGAGGGGACAGAAGCCAAGCAAGTACCCAGGTGTGAGATGCCTCAGTCAGACCGATTATACTCAAAGCTaGCTGGATTGTTGGTGGTGT | + |
Preference number: 5 (lower is better) Translates to: RRGQKPSKYPGVRCLSQTDYTQS*LDCWWC Trigger: ACACCACCAACAATCCAGCAAGCTTTGAGTATAATC...GGTCTGACTGAGGCATCTCACACCTGGGTACTTGCTTGGCTTCTGTCCCCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR CAA 90 bp | TTCAGAATTACACCAACAGCCAACAGCACAGTGGTTTACTACAATGGAGATTCCAGCCTGGGCTGTTGCTaGAGCACCGCCACAATGCCG | + |
Preference number: 5 (lower is better) Translates to: FRITPTANSTVVYYNGDSSLGCC*STATMP Trigger: CGGCATTGTGGCGGTGCTCAAGCAACAGCCCAGGCT...GGAATCTCCATTGTAGTAAACCACTGTGCTGTTGGCTGTTGGTGTAATTCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR CAA 90 bp | TCCTGGAACTCATTTTCTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCATCTGAATTGTCATTaGCAGTGTGGGATGGAGGGT | + |
Preference number: 5 (lower is better) Translates to: SWNSFSRPGWPRTQKSACHLNCH*QCGMEG Trigger: ACCCTCCATCCCACACTGCAAATGACAATTCAGATG...GCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTAGAAAATGAGTTCCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR CAA 90 bp | GCTGGAAGGAAGCAGTGTGCTCGATGGAGGGATGCTTCGACCCTTTCTGGGTACAACCCTTTTGCAGGCTaGTATTTGAGATTGAAAGGC | + |
Preference number: 5 (lower is better) Translates to: AGRKQCARWRDASTLSGYNPFAG*YLRLKG Trigger: GCCTTTCAATCTCAAATACAAGCCTGCAAAAGGGTT...GTACCCAGAAAGGGTCGAAGCATCCCTCCATCGAGCACACTGCTTCCTTCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223955.2 |
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CDS-3UTR CAA 90 bp | TCACAGGACTTGGGAGACGGTGGCCCGGGGACTCTGAAACCTGCACAGAAGACAAGGATTCCAGTATATTaGAAATCAGGTTCAGGTCTA | + |
Preference number: 5 (lower is better) Translates to: SQDLGDGGPGTLKPAQKTRIPVY*KSGSGL Trigger: TAGACCTGAACCTGATTTCAAATATACTGGAATCCT...TGTCTTCTGTGCAGGTTTCAGAGTCCCCGGGCCACCGTCTCCCAAGTCCTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR CAA 90 bp | AGGAGGAACATACCTAAGGGAGAAACTGAATATTCAGAATTACACCAACAGCCATCCTGCCAGGCCCGCTaGGGAGCTGTAGGATTCCAG | + |
Preference number: 5 (lower is better) Translates to: RRNIPKGETEYSELHQQPSCQAR*GAVGFQ Trigger: CTGGAATCCTACAGCTCCCAAGCGGGCCTGGCAGGA...TGGCTGTTGGTGTAATTCTGAATATTCAGTTTCTCCCTTAGGTATGTTCCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS CCA 90 bp | TCTCCTGCACCAGAATCTTCTTCATCTGAATTGTCATTTGCAGTGTaGGATGGAGGGTCCTTATTCAATCGCTCCCGCGTGGTGAAGCTT | + |
Preference number: 5 (lower is better) Translates to: SPAPESSSSELSFAV*DGGSLFNRSRVVKL Trigger: AAGCTTCACCACGCGGGAGCGATTGAATAAGGACCCTCCATCCCACACTGCAAATGACAATTCAGATGAAGAAGATTCTGGTGCAGGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR CAA 90 bp | ACAATGGAGATTCCGTCCTGGGCAAATGTAAAACAAATCAAACAAGCTCATGAGGGCAGCTCTGCCCCCTaGTGGCTAGACACTTTGGAG | + |
Preference number: 5 (lower is better) Translates to: TMEIPSWANVKQIKQAHEGSSAP*WLDTLE Trigger: CTCCAAAGTGTCTAGCCACAAGGGGGCAGAGCTGCC...CTCATGAGCTTGTTTGATTTGTTTTACATTTGCCCAGGACGGAATCTCCATTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS-3UTR CAA 90 bp | GACAATGTGACACGGAACCAGAAGGGAATTAATGGGGAGGGGACCAAGAGAGGATCTTCTTCATCTGAATaGTCATTTGCAGTGTGGGAT | + |
Preference number: 5 (lower is better) Translates to: DNVTRNQKGINGEGTKRGSSSSE*SFAVWD Trigger: ATCCCACACTGCAAATGACAATTCAGATGAAGAAGA...TCCTCTCTTGGTCCCCTCCCCATTAATTCCCTTCTGGTTCCGTGTCACATTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS CCA 90 bp | GTTCAATGTACTTCTGAAGAATCTCTCTGTGCTCTTCTGTGCCTCTaGCTTTATCTGGTATCAGGAAGAGATGGTACTCCACAGCATCCT | + |
Preference number: 5 (lower is better) Translates to: VQCTSEESLCALLCL*LYLVSGRDGTPQHP Trigger: AGGATGCTGTGGAGTACCATCTCTTCCTGATACCAGATAAAGCCAGAGGCACAGAAGAGCACAGAGAGATTCTTCAGAAGTACATTGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022344.4 ENSMUST00000223955.2 |
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CDS GCA 90 bp | TTATCCGTTCAATGTACTTCTGAAGAATCTCTCTGTGCTCTTCTGTaGCTCTGGCTTTATCTGGTATCAGGAAGAGATGGTACTCCACAG | + |
Preference number: 5 (lower is better) Translates to: LSVQCTSEESLCALL*LWLYLVSGRDGTPQ Trigger: CTGTGGAGTACCATCTCTTCCTGATACCAGATAAAGCCAGAGGCACAGAAGAGCACAGAGAGATTCTTCAGAAGTACATTGAACGGATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022344.4 ENSMUST00000223955.2 |
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CDS GCA 90 bp | GAGATTGAAAGGCTGATTCTGCCAGATATAAGGGACCAGTATGGGTaGGAACTGGGTCATTATCCGTTCAATGTACTTCTGAAGAATCTC | + |
Preference number: 5 (lower is better) Translates to: EIERLILPDIRDQYG*ELGHYPFNVLLKNL Trigger: GAGATTCTTCAGAAGTACATTGAACGGATAATGACCCAGTTCGCACCCATACTGGTCCCTTATATCTGGCAGAATCAGCCTTTCAATCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022344.4 ENSMUST00000223955.2 |
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CDS-3UTR CAA 90 bp | ATGGAGATTCCGTCCTGGGCAAATGTAAAACAAATCAAACAAGCTCATGAGAATTCAGGCAAAAATGTCTaGAAGACACGACAGGCTCTT | + |
Preference number: 5 (lower is better) Translates to: MEIPSWANVKQIKQAHENSGKNV*KTRQAL Trigger: AAGAGCCTGTCGTGTCTTCAAGACATTTTTGCCTGA...ATTCTCATGAGCTTGTTTGATTTGTTTTACATTTGCCCAGGACGGAATCTCCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS TCA 90 bp | CATTCATCCTCAATGTTATCTCCAAACTTTGTCATGCCGTACATATaGGCAGGAACACCTCCTTTTGCAGGCTTGTATTTGAGATTGAAA | + |
Preference number: 5 (lower is better) Translates to: HSSSMLSPNFVMPYI*AGTPPFAGLYLRLK Trigger: TTTCAATCTCAAATACAAGCCTGCAAAAGGAGGTGTTCCTGCTCATATGTACGGCATGACAAAGTTTGGAGATAACATTGAGGATGAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS TCA 72 bp | CCTGGACGGCTGCCGACAGCAGCCTGGGCTGTTGCTTaGGCACCGCCACAATGCCGGCTGGAAGGAAGCAGT | + |
Preference number: 6 (lower is better) Translates to: PGRLPTAAWAVA*APPQCRLEGSS Trigger: ACTGCTTCCTTCCAGCCGGCATTGTGGCGGTGCTCAAGCAACAGCCCAGGCTGCTGTCGGCAGCCGTCCAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS GCA 72 bp | AAGGCCTGGACGGCTGCCGACAGCAGCCTGGGCTGTTaGTTGAGCACCGCCACAATGCCGGCTGGAAGGAAG | + |
Preference number: 6 (lower is better) Translates to: KAWTAADSSLGC*LSTATMPAGRK Trigger: CTTCCTTCCAGCCGGCATTGTGGCGGTGCTCAAGCAACAGCCCAGGCTGCTGTCGGCAGCCGTCCAGGCCTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS CAA 72 bp | GAAGGCCTGGACGGCTGCCGACAGCAGCCTGGGCTGTaGCTTGAGCACCGCCACAATGCCGGCTGGAAGGAA | + |
Preference number: 6 (lower is better) Translates to: EGLDGCRQQPGL*LEHRHNAGWKE Trigger: TTCCTTCCAGCCGGCATTGTGGCGGTGCTCAAGCAACAGCCCAGGCTGCTGTCGGCAGCCGTCCAGGCCTTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS GCA 72 bp | CTCCCGCGTGGTGAAGCTTCTGCCCATGCTGGTGTGTaGCAGTTCCTGGTCCATCCGGGCCATGTAGGACTT | + |
Preference number: 6 (lower is better) Translates to: LPRGEASAHAGV*QFLVHPGHVGL Trigger: AAGTCCTACATGGCCCGGATGGACCAGGAACTGGCACACACCAGCATGGGCAGAAGCTTCACCACGCGGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS CCA 72 bp | CCTGGGCTGTTGCTTGAGCACCGCCACAATGCCGGCTaGAAGGAAGCAGTGTGCTCGATGGAGGGATGCTTC | + |
Preference number: 6 (lower is better) Translates to: PGLLLEHRHNAG*KEAVCSMEGCF Trigger: GAAGCATCCCTCCATCGAGCACACTGCTTCCTTCCAGCCGGCATTGTGGCGGTGCTCAAGCAACAGCCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS CCA 72 bp | TGTCGGGCAGTCGCACACCCATGCTGTGTAACAGATTaGAAGCAGGTCCTGCCAGGCCCGCTTGGGAGCTGT | + |
Preference number: 6 (lower is better) Translates to: CRAVAHPCCVTD*KQVLPGPLGSC Trigger: ACAGCTCCCAAGCGGGCCTGGCAGGACCTGCTTCCAATCTGTTACACAGCATGGGTGTGCGACTGCCCGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS CAA 72 bp | TTGTCGGGCAGTCGCACACCCATGCTGTGTAACAGATaGGAAGCAGGTCCTGCCAGGCCCGCTTGGGAGCTG | + |
Preference number: 6 (lower is better) Translates to: LSGSRTPMLCNR*EAGPARPAWEL Trigger: CAGCTCCCAAGCGGGCCTGGCAGGACCTGCTTCCAATCTGTTACACAGCATGGGTGTGCGACTGCCCGACAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS TCA 72 bp | CTTCATGCCCAGTTCATAAGCTCGGTACTGGGGATGTaGTGGAGGTGGGAGCCCGTATCCACTCCGCCGGTC | + |
Preference number: 6 (lower is better) Translates to: LHAQFISSVLGM*WRWEPVSTPPV Trigger: GACCGGCGGAGTGGATACGGGCTCCCACCTCCATCACATCCCCAGTACCGAGCTTATGAACTGGGCATGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS GCA 72 bp | GAGCACCGCCACAATGCCGGCTGGAAGGAAGCAGTGTaGTCGATGGAGGGATGCTTCGACCCTTTCTGGGTA | + |
Preference number: 6 (lower is better) Translates to: EHRHNAGWKEAV*SMEGCFDPFWV Trigger: TACCCAGAAAGGGTCGAAGCATCCCTCCATCGAGCACACTGCTTCCTTCCAGCCGGCATTGTGGCGGTGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS TCA 72 bp | GTGCCAGTTCCTGGTCCATCCGGGCCATGTAGGACTTaGGGCTGCCAAGGGCTCCTTTCAGAGACTCAGACT | + |
Preference number: 6 (lower is better) Translates to: VPVPGPSGPCRT*GCQGLLSETQT Trigger: AGTCTGAGTCTCTGAAAGGAGCCCTTGGCAGCCTCAAGTCCTACATGGCCCGGATGGACCAGGAACTGGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS GCA 72 bp | GCTCCTCCTTCTGGGGACCGGGCTGGGATTCTTTTCTaGCCGCAGCATCTTGCAGTAGCTGGTCTAACTGGT | + |
Preference number: 6 (lower is better) Translates to: APPSGDRAGILF*PQHLAVAGLTG Trigger: ACCAGTTAGACCAGCTACTGCAAGATGCTGCGGGCAGAAAAGAATCCCAGCCCGGTCCCCAGAAGGAGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS GCA 72 bp | GGTTGTGATCAGCGTTGTCGGGCAGTCGCACACCCATaGTGTGTAACAGATTGGAAGCAGGTCCTGCCAGGC | + |
Preference number: 6 (lower is better) Translates to: GCDQRCRAVAHP*CVTDWKQVLPG Trigger: GCCTGGCAGGACCTGCTTCCAATCTGTTACACAGCATGGGTGTGCGACTGCCCGACAACGCTGATCACAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS CCA 72 bp | GCTTCCGAAGGGTCTCTGGGCAGCTCTGCCCCCTTGTaGCTAGACACTTTGGAGATGAAGGCCTTCATGCTG | + |
Preference number: 6 (lower is better) Translates to: ASEGSLGSSAPL*LDTLEMKAFML Trigger: CAGCATGAAGGCCTTCATCTCCAAAGTGTCTAGCCACAAGGGGGCAGAGCTGCCCAGAGACCCTTCGGAAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS CAA 90 bp | TCCGAAGGGTCTCTGGGCAGCTCTGCCCCCTTGTGGCTAGACACTTaGGAGATGAAGGCCTTCATGCTGTCTGAGACCTGCGCTACATCA | + |
Preference number: 6 (lower is better) Translates to: SEGSLGSSAPLWLDT*EMKAFMLSETCATS Trigger: TGATGTAGCGCAGGTCTCAGACAGCATGAAGGCCTTCATCTCCAAAGTGTCTAGCCACAAGGGGGCAGAGCTGCCCAGAGACCCTTCGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS GCA 72 bp | GGACCGGGCTGGGATTCTTTTCTGCCCGCAGCATCTTaGAGTAGCTGGTCTAACTGGTCTGGTGAGAGGTCT | + |
Preference number: 6 (lower is better) Translates to: GPGWDSFLPAAS*SSWSNWSGERS Trigger: AGACCTCTCACCAGACCAGTTAGACCAGCTACTGCAAGATGCTGCGGGCAGAAAAGAATCCCAGCCCGGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS GCA 72 bp | AGTGATTGGAGCTTCCGAAGGGTCTCTGGGCAGCTCTaGCCCCTTGTGGCTAGACACTTTGGAGATGAAGGC | + |
Preference number: 6 (lower is better) Translates to: SDWSFRRVSGQL*PLVARHFGDEG Trigger: GCCTTCATCTCCAAAGTGTCTAGCCACAAGGGGGCAGAGCTGCCCAGAGACCCTTCGGAAGCTCCAATCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS CAA 72 bp | TCTCTGGGCAGCTCTGCCCCCTTGTGGCTAGACACTTaGGAGATGAAGGCCTTCATGCTGTCTGAGACCTGC | + |
Preference number: 6 (lower is better) Translates to: SLGSSAPLWLDT*EMKAFMLSETC Trigger: GCAGGTCTCAGACAGCATGAAGGCCTTCATCTCCAAAGTGTCTAGCCACAAGGGGGCAGAGCTGCCCAGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS TCA 72 bp | AGGCTGCCAAGGGCTCCTTTCAGAGACTCAGACTCCTaGGCCTCAAAGCCCACGTCATCATCACTGTCTACA | + |
Preference number: 6 (lower is better) Translates to: RLPRAPFRDSDS*ASKPTSSSLST Trigger: TGTAGACAGTGATGATGACGTGGGCTTTGAGGCTCAGGAGTCTGAGTCTCTGAAAGGAGCCCTTGGCAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS GCA 72 bp | AGCCCGTATCCACTCCGCCGGTCTGGCACAAACTTCTaGTGTACCAGCTGTGCGTACAGACATTTCGTGAAA | + |
Preference number: 6 (lower is better) Translates to: SPYPLRRSGTNF*CTSCAYRHFVK Trigger: TTTCACGAAATGTCTGTACGCACAGCTGGTACAGCAGAAGTTTGTGCCAGACCGGCGGAGTGGATACGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS CCA 72 bp | AGCTGGTCTAACTGGTCTGGTGAGAGGTCTAACCACTaGTCATCGTCCTCCGGAGGAAGGTCAGCTTCTTCT | + |
Preference number: 6 (lower is better) Translates to: SWSNWSGERSNH*SSSSGGRSASS Trigger: AGAAGAAGCTGACCTTCCTCCGGAGGACGATGACCAGTGGTTAGACCTCTCACCAGACCAGTTAGACCAGCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS CAA 72 bp | TCATCGTCCTCCGGAGGAAGGTCAGCTTCTTCTGTCTaGAGCTCGGCGACGTCAAATGGCTGTGTCTGTAAC | + |
Preference number: 6 (lower is better) Translates to: SSSSGGRSASSV*SSATSNGCVCN Trigger: GTTACAGACACAGCCATTTGACGTCGCCGAGCTCAAGACAGAAGAAGCTGACCTTCCTCCGGAGGACGATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS CCA 72 bp | TGGCCCAGAGCGGTGAGGCAGTCACAAGAGACTTCCTaGAGTCAGAAAAATGTGGGCTACATTTGGAGCACA | + |
Preference number: 6 (lower is better) Translates to: WPRAVRQSQETS*SQKNVGYIWST Trigger: TGTGCTCCAAATGTAGCCCACATTTTTCTGACTCCAGGAAGTCTCTTGTGACTGCCTCACCGCTCTGGGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS CCA 72 bp | TGGGATTCTTTTCTGCCCGCAGCATCTTGCAGTAGCTaGTCTAACTGGTCTGGTGAGAGGTCTAACCACTGG | + |
Preference number: 6 (lower is better) Translates to: WDSFLPAASCSS*SNWSGERSNHW Trigger: CCAGTGGTTAGACCTCTCACCAGACCAGTTAGACCAGCTACTGCAAGATGCTGCGGGCAGAAAAGAATCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS CAA 90 bp | CAGCGCAATCTCCTGCACCAGAATCTTCTTCATCTGAATTGTCATTaGCAGTGTGGGATGGAGGGTCCTTATTCAATCGCTCCCGCGTGG | + |
Preference number: 6 (lower is better) Translates to: QRNLLHQNLLHLNCH*QCGMEGPYSIAPAW Trigger: CCACGCGGGAGCGATTGAATAAGGACCCTCCATCCCACACTGCAAATGACAATTCAGATGAAGAAGATTCTGGTGCAGGAGATTGCGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS CAA 90 bp | CAGGTCCTGCCAGGCCCGCTTGGGAGCTGTAGGATTCCAGTATATTaGAAATCAGGTTCAGGTCTACATCCACTGCTTCAACAGCGCAAT | + |
Preference number: 6 (lower is better) Translates to: QVLPGPLGSCRIPVY*KSGSGLHPLLQQRN Trigger: ATTGCGCTGTTGAAGCAGTGGATGTAGACCTGAACCTGATTTCAAATATACTGGAATCCTACAGCTCCCAAGCGGGCCTGGCAGGACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS TCA 72 bp | CCTTTTCAGACTTTCAAGGAAGCTGGCCCAGAGCGGTaGGGCAGTCACAAGAGACTTCCTGGAGTCAGAAAA | + |
Preference number: 6 (lower is better) Translates to: PFQTFKEAGPER*GSHKRLPGVRK Trigger: TTTTCTGACTCCAGGAAGTCTCTTGTGACTGCCTCACCGCTCTGGGCCAGCTTCCTTGAAAGTCTGAAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS TCA 72 bp | GCTAGACACTTTGGAGATGAAGGCCTTCATGCTGTCTaGGACCTGCGCTACATCATAGTTCTGCAGCTCCTC | + |
Preference number: 6 (lower is better) Translates to: ARHFGDEGLHAV*DLRYIIVLQLL Trigger: GAGGAGCTGCAGAACTATGATGTAGCGCAGGTCTCAGACAGCATGAAGGCCTTCATCTCCAAAGTGTCTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS TCA 72 bp | CCGAGGCCATTATTCGTGTTTCAGGCAAAAATGTCTTaGAGACACGACAGGCTCTTAGGTCAATGGGGTCCC | + |
Preference number: 6 (lower is better) Translates to: PRPLFVFQAKMS*RHDRLLGQWGP Trigger: GGGACCCCATTGACCTAAGAGCCTGTCGTGTCTTCAAGACATTTTTGCCTGAAACACGAATAATGGCCTCGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS TCA 72 bp | GGTGCGAACTGGGTCATTATCCGTTCAATGTACTTCTaGAGAATCTCTCTGTGCTCTTCTGTGCCTCTGGCT | + |
Preference number: 6 (lower is better) Translates to: GANWVIIRSMYF*RISLCSSVPLA Trigger: AGCCAGAGGCACAGAAGAGCACAGAGAGATTCTTCAGAAGTACATTGAACGGATAATGACCCAGTTCGCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022344.4 ENSMUST00000223955.2 |
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CDS CCA 72 bp | TCTGTGCCTCTGGCTTTATCTGGTATCAGGAAGAGATaGTACTCCACAGCATCCTCTACCATTGCGAGCTTT | + |
Preference number: 6 (lower is better) Translates to: SVPLALSGIRKR*YSTASSTIASF Trigger: AAAGCTCGCAATGGTAGAGGATGCTGTGGAGTACCATCTCTTCCTGATACCAGATAAAGCCAGAGGCACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022344.4 ENSMUST00000223955.2 |
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CDS CAA 72 bp | ACCGAGGCCATTATTCGTGTTTCAGGCAAAAATGTCTaGAAGACACGACAGGCTCTTAGGTCAATGGGGTCC | + |
Preference number: 6 (lower is better) Translates to: TEAIIRVSGKNV*KTRQALRSMGS Trigger: GGACCCCATTGACCTAAGAGCCTGTCGTGTCTTCAAGACATTTTTGCCTGAAACACGAATAATGGCCTCGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS CAA 72 bp | CCAGGCCCGCTTGGGAGCTGTAGGATTCCAGTATATTaGAAATCAGGTTCAGGTCTACATCCACTGCTTCAA | + |
Preference number: 6 (lower is better) Translates to: PGPLGSCRIPVY*KSGSGLHPLLQ Trigger: TTGAAGCAGTGGATGTAGACCTGAACCTGATTTCAAATATACTGGAATCCTACAGCTCCCAAGCGGGCCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS CAA 90 bp | GCTTCAACAGCGCAATCTCCTGCACCAGAATCTTCTTCATCTGAATaGTCATTTGCAGTGTGGGATGGAGGGTCCTTATTCAATCGCTCC | + |
Preference number: 6 (lower is better) Translates to: ASTAQSPAPESSSSE*SFAVWDGGSLFNRS Trigger: GGAGCGATTGAATAAGGACCCTCCATCCCACACTGCAAATGACAATTCAGATGAAGAAGATTCTGGTGCAGGAGATTGCGCTGTTGAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS GCA 72 bp | AGGCTGATTCTGCCAGATATAAGGGACCAGTATGGGTaGGAACTGGGTCATTATCCGTTCAATGTACTTCTG | + |
Preference number: 6 (lower is better) Translates to: RLILPDIRDQYG*ELGHYPFNVLL Trigger: CAGAAGTACATTGAACGGATAATGACCCAGTTCGCACCCATACTGGTCCCTTATATCTGGCAGAATCAGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022344.4 ENSMUST00000223955.2 |
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CDS CAA 72 bp | AAGTCGGCCGCTTCTATTAACAGGAACTCACCATCATaGTCTTCAACCCTGGCCACTAACTCTGGAAATTCC | + |
Preference number: 6 (lower is better) Translates to: KSAASINRNSPS*SSTLATNSGNS Trigger: GGAATTTCCAGAGTTAGTGGCCAGGGTTGAAGACAATGATGGTGAGTTCCTGTTAATAGAAGCGGCCGACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |
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CDS CAA 72 bp | GCGCAATCTCCTGCACCAGAATCTTCTTCATCTGAATaGTCATTTGCAGTGTGGGATGGAGGGTCCTTATTC | + |
Preference number: 6 (lower is better) Translates to: AQSPAPESSSSE*SFAVWDGGSLF Trigger: GAATAAGGACCCTCCATCCCACACTGCAAATGACAATTCAGATGAAGAAGATTCTGGTGCAGGAGATTGCGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022344.4 |